Fotiadis, Dimitrios José

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2015

Looser, V; Bruhlmann, B; Bumbak, F; Stenger, C; Costa, M; Camattari, A; Fotiadis, Dimitrios José; Kovar, K (2015). Cultivation strategies to enhance productivity of Pichia pastoris: A review. Biotechnology advances, 33(6 Pt 2), pp. 1177-1193. Elsevier 10.1016/j.biotechadv.2015.05.008

Kalbermatter, David; Jeckelmann, Jean-Marc; Chiu, Po-Lin; Ucurum Fotiadis, Zöhre; Walz, Thomas; Fotiadis, Dimitrios José (2015). 2D and 3D crystallization of the wild-type IIC domain of the glucose PTS transporter from Escherichia coli. Journal of structural biology, 191(3), pp. 376-380. Elsevier 10.1016/j.jsb.2015.08.003

Fotiadis, Dimitrios José; Engel, Andreas (2015). Two-Dimensional Crystallisation of Membrane Proteins and Structural Assessment. In: eLS (pp. 1-10). John Wiley & Sons, Ltd.

Petrosyan, Rafayel; Bippes, Christian A; Walheim, Stefan; Harder, Daniel; Fotiadis, Dimitrios José; Schimmel, Thomas; Alsteens, David; Müller, Daniel J (2015). Single-molecule force spectroscopy of membrane proteins from membranes freely spanning across nanoscopic pores. Nano letters, 15(5), pp. 3624-3633. American Chemical Society 10.1021/acs.nanolett.5b01223

Boggavarapu, Venkata Ravi Naga Rajendr; Jeckelmann, Jean-Marc; Harder, Daniel; Ucurum Fotiadis, Zöhre; Fotiadis, Dimitrios José (2015). Role of electrostatic interactions for ligand recognition and specificity of peptide transporters. BMC biology, 13(58), p. 58. BioMed Central 10.1186/s12915-015-0167-8

Bosshart, Patrick; Engel, Andreas; Fotiadis, Dimitrios José (2015). High-resolution atomic force microscopy imaging of rhodopsin in rod outer segment disk membranes. Methods in molecular biology, 1271, pp. 189-203. Humana Press 10.1007/978-1-4939-2330-4_13

2014

Meury, Marcel; Costa Torres, Meritxell; Harder, Daniel; Stauffer, Mirko; Jeckelmann, Jean-Marc; Brühlmann, Béla; Rosell, Albert; Ilgü, Hüseyin; Kovar, Karin; Palacín, Manuel; Fotiadis, Dimitrios José (2014). Detergent-induced stabilization and improved 3D map of the human heteromeric amino acid transporter 4F2hc-LAT2. PLoS ONE, 9(10), e109882. Public Library of Science 10.1371/journal.pone.0109882

Jeckelmann, Jean-Marc; Harder, Daniel; Ucurum Fotiadis, Zöhre; Fotiadis, Dimitrios José (2014). 2D and 3D crystallization of a bacterial homologue of human vitamin C membrane transport proteins. Journal of structural biology, 188(1), pp. 87-91. Elsevier 10.1016/j.jsb.2014.08.004

Ilgü, Hüseyin; Jeckelmann, Jean-Marc; Gachet Otanez, Maria Salomé; Boggavarapu, Venkata Ravi Naga Rajendr; Ucurum Fotiadis, Zöhre; Gertsch, Jürg; Fotiadis, Dimitrios José (2014). Variation of the detergent-binding capacity and phospholipid content of membrane proteins when purified in different detergents. Biophysical journal, 106(8), pp. 1660-1670. Biophysical Society 10.1016/j.bpj.2014.02.024

Rosell, Albert; Meury, Marcel; Alvarez-Marimon, Elena; Costa Torres, Meritxell; Pérez-Cano, Laura; Zorzano, Antonio; Fernández-Recio, Juan; Palacín, Manuel; Fotiadis, Dimitrios José (2014). Structural bases for the interaction and stabilization of the human amino acid transporter LAT2 with its ancillary protein 4F2hc. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 111(8), pp. 2966-2971. National Academy of Sciences NAS 10.1073/pnas.1323779111

2013

Bippes, Christian A.; Ge, Lin; Meury, Marcel; Harder, Daniel; Ucurum, Zöhre; Daniel, Hannelore; Fotiadis, Dimitrios; Müller, Daniel J. (2013). Peptide transporter DtpA has two alternate conformations, one of which is promoted by inhibitor binding. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 110(42), E3978-E3986. National Academy of Sciences NAS 10.1073/pnas.1312959110

Boggavarapu, Rajendra; Jeckelmann, Jean-Marc; Harder, Daniel; Schneider, Philipp; Ucurum, Zöhre; Hediger, Matthias; Fotiadis, Dimitrios (2013). Expression, purification and low-resolution structure of human vitamin C transporter SVCT1 (SLC23A1). PLoS ONE, 8(10), e76427. Public Library of Science 10.1371/journal.pone.0076427

Fotiadis, Dimitrios; Kanai, Yoshikatsu; Palacín, Manuel (2013). The SLC3 and SLC7 families of amino acid transporters. Molecular aspects of medicine, 34(2-3), pp. 139-158. Elsevier 10.1016/j.mam.2012.10.007

Bodoy, Susanna; Fotiadis, Dimitrios; Stoeger, Claudia; Kanai, Yoshikatsu; Palacín, Manuel (2013). The small SLC43 family: facilitator system l amino acid transporters and the orphan EEG1. Molecular aspects of medicine, 34(2-3), pp. 638-645. Elsevier 10.1016/j.mam.2012.12.006

Costa, Meritxell; Rosell, Albert; Álvarez-Marimon, Elena; Zorzano, Antonio; Fotiadis, Dimitrios; Palacín, Manuel (2013). Expression of human heteromeric amino acid transporters in the yeast Pichia pastoris. Protein expression and purification, 87(1), pp. 35-40. Elsevier 10.1016/j.pep.2012.10.003

Fotiadis, Dimitrios; Müller, Daniel J (2013). High-resolution imaging of 2D outer membrane protein F (OmpF) crystals by atomic force microscopy. In: Schmidt-Krey, Ingeborg; Cheng, Yifan (eds.) Electron Crystallography of Soluble and Membrane Proteins. Methods in Molecular Biology: Vol. 955 (pp. 461-474). Humana Press 10.1007/978-1-62703-176-9_24

2012

Stach, Michaela; Maillard, Noélie; Kadam, Rameshwar; Kalbermatter, David; Meury, M.; Page, Malcolm; Fotiadis, Dimitrios José; Darbre, Tamis; Reymond, Jean-Louis (2012). Membrane disrupting antimicrobial peptide dendrimers with multiple amino termini. Medicinal chemistry communications - MedChemComm, 3(1), pp. 86-89. Cambridge: Royal Society of Chemistry 10.1039/c1md00272d

Harder, Daniel; Fotiadis, Dimitrios (2012). Measuring substrate binding and affinity of purified membrane transport proteins using the scintillation proximity assay. Nature protocols, 7(9), pp. 1569-78. London: Nature Publishing Group 10.1038/nprot.2012.090

Fotiadis, Dimitrios (2012). Atomic force microscopy for the study of membrane proteins. Current opinion in biotechnology, 23(4), pp. 510-5. Amsterdam: Elsevier 10.1016/j.copbio.2011.11.032

Kuhn, A; Fotiadis, D (2012). Membrane proteins - at the core of life. Public service review - European science & technology, 17 Newcastle-under-Lyme, UK: publicservice.co.uk Ltd

2011

Jeckelmann, Jean-Marc; Harder, Daniel; Mari, Stefania A; Meury, Marcel; Ucurum, Zöhre; Müller, Daniel J; Erni, Bernhard; Fotiadis, Dimitrios (2011). Structure and function of the glucose PTS transporter from Escherichia coli. Journal of structural biology, 176(3), pp. 395-403. San Diego, Calif.: Elsevier 10.1016/j.jsb.2011.09.012

Bergeron, Marc J.; Boggavarapu, Rajendra; Meury, Marcel; Ucurum, Zöhre; Caron, Luc; Isenring, Paul; Hediger, Matthias A.; Fotiadis, Dimitrios (2011). Frog oocytes to unveil the structure and supramolecular organization of human transport proteins. PLoS ONE, 6(7), e21901. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0021901

Meury, Marcel; Harder, Daniel; Ucurum, Zöhre; Boggavarapu, Rajendra; Jeckelmann, Jean-Marc; Fotiadis, Dimitrios (2011). Structure determination of channel and transport proteins by high-resolution microscopy techniques. Biological chemistry, 392(1-2), pp. 143-50. Berlin: De Gruyter 10.1515/BC.2011.004

Jeckelmann, Jean-Marc; Palacin, Manuel; Fotiadis, Dimitrios (2011). A tool for the qualitative comparison of membrane-embedded and detergent-solubilized membrane protein structures in projection. Journal of structural biology, 173(2), pp. 375-81. San Diego, Calif.: Elsevier 10.1016/j.jsb.2010.09.005

2009

Casagrande, Fabio; Harder, Daniel; Schenk, Andreas; Meury, Marcel; Ucurum, Zohre; Engel, Andreas; Weitz, Dietmar; Daniel, Hannelore; Fotiadis, Dimitrios (2009). Projection structure of DtpD (YbgH), a prokaryotic member of the peptide transporter family. Journal of molecular biology, 394(4), pp. 708-17. Amsterdam: Elsevier 10.1016/j.jmb.2009.09.048

Bippes, Christian A; Zeltina, Antra; Casagrande, Fabio; Ratera, Merce; Palacin, Manuel; Muller, Daniel J; Fotiadis, Dimitrios (2009). Substrate binding tunes conformational flexibility and kinetic stability of an amino acid antiporter. Journal of biological chemistry, 284(28), pp. 18651-63. Bethesda, Md.: American Society for Biochemistry and Molecular Biology 10.1074/jbc.M109.004267

Jastrzebska, Beata; Golczak, Marcin; Fotiadis, Dimitrios; Engel, Andreas; Palczewski, Krzysztof (2009). Isolation and functional characterization of a stable complex between photoactivated rhodopsin and the G protein, transducin. FASEB journal, 23(2), pp. 371-81. Bethesda, Md.: Federation of American Societies for Experimental Biology 10.1096/fj.07-114835

2008

Casagrande, Fabio; Ratera, Merce; Schenk, Andreas D; Chami, Mohamed; Valencia, Eva; Lopez, Jesus Maria; Torrents, David; Engel, Andreas; Palacin, Manuel; Fotiadis, Dimitrios (2008). Projection structure of a member of the amino acid/polyamine/organocation transporter superfamily. Journal of biological chemistry, 283(48), pp. 33240-8. Bethesda, Md.: American Society for Biochemistry and Molecular Biology 10.1074/jbc.M806917200

Harder, Daniel; Stolz, Jürgen; Casagrande, Fabio; Obrdlik, Petr; Weitz, Dietmar; Fotiadis, Dimitrios; Daniel, Hannelore (2008). DtpB (YhiP) and DtpA (TppB, YdgR) are prototypical proton-dependent peptide transporters of Escherichia coli. FEBS journal, 275(13), pp. 3290-8. Oxford: Wiley-Blackwell 10.1111/j.1742-4658.2008.06477.x

Whorton, Matthew R; Jastrzebska, Beata; Park, Paul S-H; Fotiadis, Dimitrios; Engel, Andreas; Palczewski, Krzysztof; Sunahara, Roger K (2008). Efficient coupling of transducin to monomeric rhodopsin in a phospholipid bilayer. Journal of biological chemistry, 283(7), pp. 4387-94. Bethesda, Md.: American Society for Biochemistry and Molecular Biology 10.1074/jbc.M703346200

Hoogenboom, B.W.; Frederix, P.L.T.M.; Fotiadis, D (2008). Potential of interferometric cantilever detection and its application for SFM/AFM in liquids. Nanotechnology, 19(38), p. 384019. Bristol, UK: Institute of Physics Publishing IOP 10.1088/0957-4484/19/38/384019

Bosshart, P.D.; Casagrande, F; Frederix, P.L.T.M.; Ratera, M; Bippes, C.A.; Müller, D.J.; Palacin, M; Engel, A; Fotiadis, D (2008). High-throughput single-molecule force spectroscopy for membrane proteins. Nanotechnology, 19(38), p. 384014. Bristol, UK: Institute of Physics Publishing IOP 10.1088/0957-4484/19/38/384014

2007

Arechaga, Ignacio; Fotiadis, Dimitrios (2007). Reconstitution of mitochondrial ATP synthase into lipid bilayers for structural analysis. Journal of structural biology, 160(3), pp. 287-94. San Diego, Calif.: Elsevier 10.1016/j.jsb.2007.09.007

Hoogenboom, Bart W; Suda, Kitaru; Engel, Andreas; Fotiadis, Dimitrios (2007). The supramolecular assemblies of voltage-dependent anion channels in the native membrane. Journal of molecular biology, 370(2), pp. 246-55. Amsterdam: Elsevier 10.1016/j.jmb.2007.04.073

Reig, Núria; del Rio, César; Casagrande, Fabio; Ratera, Mercè; Gelpí, Josep Lluís; Torrents, David; Henderson, Peter J F; Xie, Hao; Baldwin, Stephen A; Zorzano, Antonio; Fotiadis, Dimitrios; Palacín, Manuel (2007). Functional and structural characterization of the first prokaryotic member of the L-amino acid transporter (LAT) family: a model for APC transporters. Journal of biological chemistry, 282(18), pp. 13270-81. Bethesda, Md.: American Society for Biochemistry and Molecular Biology 10.1074/jbc.M610695200

Weitz, Dietmar; Harder, Daniel; Casagrande, Fabio; Fotiadis, Dimitrios; Obrdlik, Petr; Kelety, Bela; Daniel, Hannelore (2007). Functional and structural characterization of a prokaryotic peptide transporter with features similar to mammalian PEPT1. Journal of biological chemistry, 282(5), pp. 2832-9. Bethesda, Md.: American Society for Biochemistry and Molecular Biology 10.1074/jbc.M604866200

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