Reyes, Mauricio

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2016

Porz, Nicole; Habegger, Simon; Meier, Raphael; Verma, Rajeev Kumar; Jilch, Astrid; Fichtner, Jens; Knecht, Urspeter; Radina, Christian; Schucht, Philippe; Beck, Jürgen; Raabe, Andreas; Slotboom, Johannes; Reyes, Mauricio; Wiest, Roland (2016). Fully Automated Enhanced Tumor Compartmentalization: Man vs. Machine Reloaded. PLoS ONE, 11(11), e0165302. Public Library of Science 10.1371/journal.pone.0165302

Maier, Oskar; Menze, Bjoern H; von der Gablentz, Janina; Häni, Levin; Heinrich, Mattias P; Liebrand, Matthias; Winzeck, Stefan; Basit, Abdul; Bentley, Paul; Chen, Liang; Christiaens, Daan; Dutil, Francis; Egger, Karl; Feng, Chaolu; Glocker, Ben; Götz, Michael; Haeck, Tom; Halme, Hanna-Leena; Havaei, Mohammad; Iftekharuddin, Khan M; ... (2016). ISLES 2015 - A public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI. Medical image analysis, 35, pp. 250-269. Elsevier 10.1016/j.media.2016.07.009

Seif, Maryam; Mani, Laila-Yasmin; Lu, Huanxiang; Boesch, Christoph Hans; Reyes, Mauricio; Vogt, Bruno; Vermathen, Peter (2016). Diffusion tensor imaging of the human kidney: Does image registration permit scanning without respiratory triggering? Journal of magnetic resonance imaging, 44(2), n/a-n/a. Wiley Interscience 10.1002/jmri.25176

Taghizadeh, Elham; Reyes, Mauricio; Zysset, Philippe; Latypova, Adeliya; Terrier, Alexandre; Büchler, Philippe (2016). Biomechanical Role of Bone Anisotropy Estimated on Clinical CT Scans by Image Registration. Annals of biomedical engineering, 44(8), pp. 2505-2517. Springer 10.1007/s10439-016-1551-4

Taghizadeh, Elham; Kistler, Michael; Büchler, Philippe; Reyes, Mauricio (2016). Fast Prediction of Femoral Biomechanics Using Supervised Machine Learning and Statistical Shape Modeling. In: Joldes, Grand; Doyle, Barry; Wittek, Adam; Nielsen, Poul; Miller, Karol (eds.) Computational Biomechanics for Medicine X (pp. 115-127). Springer-Verlag New York

Meier, Raphael; Knecht, Urspeter; Loosli, Tina; Bauer, Stefan; Slotboom, Johannes; Wiest, Roland; Reyes, Mauricio (2016). Clinical Evaluation of a Fully-automatic Segmentation Method for Longitudinal Brain Tumor Volumetry. Scientific Reports, 6(23376), p. 23376. Nature Publishing Group 10.1038/srep23376

Valenzuela, Waldo Enrique; Ferguson, Stephen John; Ignasiak, Dominika; Diserens, Gaëlle; Häni, Levin; Wiest, Roland; Vermathen, Peter; Boesch, Christoph Hans; Reyes, Mauricio (2016). FISICO: Fast Image SegmentatIon COrrection. PLoS ONE, 11(5), e0156035. Public Library of Science 10.1371/journal.pone.0156035

McKinley, Richard; Häni, Levin; Gralla, Jan; El-Koussy, Marwan; Bauer, S; Arnold, Marcel; Fischer, Urs; Jung, Simon; Mattmann, Kaspar; Reyes, Mauricio; Wiest, Roland (2016). Fully automated stroke tissue estimation using random forest classifiers (FASTER). Journal of cerebral blood flow and metabolism, 271678X16674221. Nature Publishing Group 10.1177/0271678X16674221

Lu, Ping; Barazzetti, Livia; Chandran, Vimal; Gavaghan, Kate; Weber, Stefan; Gerber, Nicolas; Reyes, Mauricio (2016). Super-Resolution Classification Improves Facial Nerve Segmentation from CBCT Imaging. In: CURAC 2016 : 15. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie. 29.09.-01.10.2016.

2015

Taghizadeh, Elham; Reyes, Mauricio; Büchler, Philippe (2 October 2015). Statistical Model of Bone Mechanical Properties. In: Shape Symposium.

Cerrolaza, Juan J; Reyes, Mauricio; Summers, Ronald M; González-Ballester, Miguel Ángel; Linguraru, Marius George (2015). Automatic multi-resolution shape modeling of multi-organ structures. Medical image analysis, 25(1), pp. 11-21. Elsevier 10.1016/j.media.2015.04.003

Chandran, Vimal; Zysset, Philippe; Reyes, Mauricio (October 2015). Prediction of Trabecular Bone Anisotropy from Quantitative Computed Tomography using Supervised Learning and a Novel Morphometric Feature Descriptor. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015. 18th International Conference, Munich, Germany, October 5-9, 2015, Proceedings, Part I, 9349, pp. 621-628. Springer International Publishing 10.1007/978-3-319-24553-9_76

Chappuis, Vivianne; Engel, Odette; Shahim, Kamal; Reyes, Mauricio; Katsaros, Christos; Buser, Daniel (2015). Soft Tissue Alterations in Esthetic Postextraction Sites: A 3-Dimensional Analysis. Journal of dental research, 94(9), 187S-193S. Sage 10.1177/0022034515592869

Lu, Ping; Barazzetti, Livia; Chandran, Vimal; Gerber, Kate; Weber, Stefan; Gerber, Nicolas; Reyes, Mauricio (August 2015). Facial Nerve Image Enhancement from CBCT using Supervised Learning Technique. IEEE Engineering in Medicine and Biology Society conference proceedings, 2015, pp. 2964-2967. IEEE Service Center 10.1109/EMBC.2015.7319014

Seif, Maryam; Lu, Huanxiang; Boesch, Chris; Reyes, Mauricio; Vermathen, Peter (2015). Image registration for triggered and non-triggered DTI of the human kidney: Reduced variability of diffusion parameter estimation. Journal of magnetic resonance imaging, 41(5), pp. 1228-1235. Departments of Clinical Research and Radiology, University of Bern, Bern, Switzerland.: Wiley Interscience 10.1002/jmri.24671

Menze, Bjoern; Reyes, Mauricio; Van Leemput, Koen; Porz, Nicole; Wiest, Roland (2015). The Multimodal Brain TumorImage Segmentation Benchmark (BRATS). IEEE transactions on medical imaging, 34(10), pp. 199-2024. Institute of Electrical and Electronics Engineers IEEE 10.1109/TMI.2014.2377694

Rios Velazquez, Emmanuel; Meier, Raphael; Dunn, William D; Alexander, Brian; Wiest, Roland; Bauer, Stefan; Gutman, David A; Reyes, Mauricio; Aerts, Hugo J W L (2015). Fully automatic GBM segmentation in the TCGA-GBM dataset: Prognosis and correlation with VASARI features. Scientific Reports, 5(16822), p. 16822. Nature Publishing Group 10.1038/srep16822

Taghizadeh, Elham; Latypova, Adeliya; Maquer, Ghislain Bernard; Reyes, Mauricio; Büchler, Philippe (2015). Including anisotropic information of trabecular bone using image registration. In: 21h Congress of the European Society of Biomechanics. Prague, Czech Republic. 05.-08.07.2015.

Valenzuela, Waldo Enrique; Ferguson, Stephen J.; Ignasiak, Dominika; Diserens, Gaëlle; Vermathen, Peter; Boesch, Christoph Hans; Reyes, Mauricio (2015). Correction tool for Active Shape Model based lumbar muscle segmentation. IEEE Engineering in Medicine and Biology Society conference proceedings, pp. 3033-3036. IEEE Service Center 10.1109/EMBC.2015.7319031

2014

Bonaretti, Serena; Seiler, Christof; Boichon, Christelle; Reyes, Mauricio; Büchler, Philippe (2014). Image-based vs. mesh-based statistical appearance models of the human femur: Implications for finite element simulations. Medical engineering & physics, 36(12), pp. 1626-1635. Elsevier 10.1016/j.medengphy.2014.09.006

Cerrolaza, Juan J.; Villanueva, Arantxa; Reyes, Mauricio; Cabeza, Rafael; González Ballester, Miguel Angel; Linguraru, Marius George (September 2014). Generalized Multiresolution Hierarchical Shape Models via Automatic Landmark Clusterization. In: Golland, Polina; Hata, Nobuhiko; Barillot, Christian; Hornegger, Joachim; Howe, Robert (eds.) Medical Image Computing and Computer-Assisted Intervention — MICCAI 2014. Proceedings, Part III. Boston, MA, USA. 14.09.-18.09.2014. 10.1007/978-3-319-10443-0_1

Meier, Raphael; Bauer, Stefan; Slotboom, Johannes; Wiest, Roland; Reyes, Mauricio (September 2014). Patient-Specific Semi-Supervised Learning for Postoperative Brain Tumor Segmentation. In: Medical Image Computing and Computer-Assisted Intervention — MICCAI 2014. Proceedings, Part I. Lecture Notes in Computer Science: Vol. 17 (pp. 714-721). Springer

Gerig, Thomas; Shahim, Kamal; Reyes, Mauricio; Vetter, Thomas; Lüthi, Marcel (September 2014). Spatially Varying Registration using Gaussian Processes. In: Golland, Polina; Hata, Nobuhiko; Barillot, Christian; Hornegger, Joachim; Howe, Robert (eds.) Medical Image Computing and Computer-Assisted Intervention — MICCAI 2014. Proceedings, Part II. Lecture Notes in Computer Science: Vol. 8674 (pp. 413-420). Springer 10.1007/978-3-319-10470-6_52

Seiler, Christof; Gazdhar, Amiq Ur Rahman; Reyes, Mauricio; Benneker, Lorin M; Geiser, Thomas; Siebenrock, Klaus A; Gantenbein-Ritter, Benjamin (2014). Time-lapse microscopy and classification of 2D human mesenchymal stem cells based on cell shape picks up myogenic from osteogenic and adipogenic differentiation. Journal of tissue engineering and regenerative medicine, 8(9), pp. 737-746. Chichester: John Wiley & Sons 10.1002/term.1575

Bauer, Stefan; Wiest, Roland; Slotboom, Johannes; Reyes, Mauricio (2014). Atlas-based Segmentation of Tumor-bearing Brain Images. In: Hayat, M.A. (ed.) Molecular Mechanisms, Children's Cancer, Treatments, and Radiosurgery. Tumors of the Central Nervous System: Vol. 12 (pp. 159-169). Dordrecht: Springer 10.1007/978-94-007-7217-5_14

Bauer, Stefan; Porz, Nicole; Meier, Raphael; Pica, Alessia; Slotboom, Johannes; Wiest, Roland; Reyes, Mauricio (2014). Interactive Segmentation of MR Images from Brain Tumor Patients. In: ISBI 2014: Proceedings of the 2014 IEEE international conference on Biomedical imaging (pp. 862-865). Beijing: IEEE 10.1109/ISBI.2014.6868007

Bauer, Stefan; Gratz, Pascal P.; Gralla, Jan; Reyes, Mauricio; Wiest, Roland (2014). Towards Automatic MRI Volumetry for Treatment Selection in Acute Ischemic Stroke Patients. In: Proceedings of the 36th Annual International Conference of the IEEE EMBS. Chicago, IL. 26.08.-30.08.2014. 10.1109/EMBC.2014.6943891

Taghizadeh, Elham; Maquer, Ghislain Bernard; Reyes, Mauricio; Büchler, Philippe (2014). Including the trabecular anisotropy from registered microCT data in homogenized FE model improves the bone's mechanical predictions (Unpublished). In: CMBBE 2014.

2013

Chappuis, Vivianne; Engel, Odette; Reyes, Mauricio; Shahim, K; Nolte, L-P; Buser, Daniel (2013). Ridge alterations post-extraction in the esthetic zone: a 3D analysis with CBCT. Journal of dental research, 92(12 Sup), 195S-201S. Sage 10.1177/0022034513506713

Valenzuela, Waldo Enrique; Vermathen, Peter; Boesch, Christoph Hans; Nolte, Lutz-Peter; Reyes, Mauricio (1 October 2013). iSix - Image Segmentation in Osirix (Unpublished). In: 30th Annual Scientific Meeting of the European Society for Magnetic Resonance in Medicine and Biology. Toulouse, France. 03.10.-05.10.2013.

Shahim, Kamal; Jürgens, Philipp; Cattin, Philippe C.; Nolte, Lutz-P.; Reyes, Mauricio (October 2013). Prediction of Cranio-Maxilofacial Surgical Planning using an Inverse Soft Tissue Modelling Approach. In: The 16th Conference on Medical Image Computing and Computer Assisted Intervention — MICCAI 2013. Lecture Notes in Computer Science: Vol. 8149 (pp. 18-25). Springer 10.1007/978-3-642-40811-3_3

Jürgens, P.; Shahim, Kamal; Cattin, P.; Zeilhofer, H. F.; Reyes, Mauricio (October 2013). Backward-planning for orthognatic surgery - a new inverse modelling algorithm to define the hard-tissue position from a desired soft-tissue surface. International journal of oral & maxillofacial surgery, 42(10), p. 1331. Elsevier 10.1016/j.ijom.2013.07.557

Oliveira-Santos, Thiago; Baumberger, Christian; Constantinescu, Mihai; Olariu, Radu; Nolte, Lutz-Peter; Alaraibi, Salman; Reyes, Mauricio (2013). 3D Face Reconstruction from 2D Pictures: First Results of a Web-Based Computer Aided System for Aesthetic Procedures. Annals of biomedical engineering, 41(5), pp. 952-966. Springer 10.1007/s10439-013-0744-3

Bousleiman, Habib; Paul, Laurent; Nolte, Lutz-Peter; Reyes, Mauricio (2013). Comparative Evaluation of Pelvic Allograft Selection Methods. Annals of biomedical engineering, 41(5), pp. 931-938. Springer 10.1007/s10439-013-0739-0

Lu, Huanxiang; Beisteiner, Roland; Nolte, Lutz-Peter; Reyes, Mauricio (2013). Hierarchical segmentation-assisted multimodal registration for MR brain images. Computerized medical imaging and graphics, 37(3), pp. 234-244. Elsevier 10.1016/j.compmedimag.2013.03.004

Bauer, Stefan; Lu, Huanxiang; May, Christian P.; Nolte, Lutz-P.; Büchler, Philippe; Reyes, Mauricio (2013). Integrated Segmentation of Brain Tumor Images for Radiotherapy and Neurosurgery. International journal of imaging systems and technology, 23(1), pp. 59-63. John Wiley & Sons 10.1002/ima.22037

Bousleiman, Habib; Iizuka, Tateyuki; Nolte, Lutz-Peter; Reyes, Mauricio (2013). Population-based design of mandibular fixation plates with bone quality and morphology considerations. Annals of biomedical engineering, 41(2), pp. 377-384. Cambridge: Springer 10.1007/s10439-012-0671-8

Bauer, Stefan; Fejes, Thomas; Reyes, Mauricio (2013). A Skull-Stripping Filter for ITK. Insight journal, 2012 Kitware, Inc.

Kim, Bo-Ram; Oh, Kyung-Min; Cevidanes, Lucia H.S.; Park, Jeong-Eon; Sim, Hyoung-Seob; Seo, Sung-Kyung; Reyes, Mauricio; Kim, Yoon-Ji; Park, Yang-Ho (2013). Analysis of 3D Soft Tissue Changes After 1- and 2-Jaw Orthognathic Surgery in Mandibular Prognathism Patients. Journal of oral and maxillofacial surgery, 71(1), pp. 151-161. Maryland Heights, Mo.: Elsevier 10.1016/j.joms.2012.02.005

Ritacco, Lucas Eduardo; Seiler, Christof; Farfalli, German Luis; Nolte, Lutz-Peter; Reyes, Mauricio; Muscolo, Domingo Luis; Tinao, Luis Aponte (2013). Validity of an automatic measure protocol in distal femur for allograft selection from a three-dimensional virtual bone bank system. Cell and Tissue Banking, 14(2), pp. 213-220. Springer 10.1007/s10561-012-9307-3

Bauer, Stefan; Wiest, Roland; Nolte, Lutz-Peter; Reyes, Mauricio (2013). A survey of MRI-based medical image analysis for brain tumor studies. Physics in medicine and biology, 58(13), R97-R129. Bristol: Institute of Physics Publishing IOP 10.1088/0031-9155/58/13/R97

Shahim, Kamal; Goksel, O.; Jürgens, P.; Reyes, Mauricio (2013). Accuracy Improvement In Cranio-Maxillofacial Soft Tissue Simulation Using A Muscle Embedded Meshing Approach. IEEE Engineering in Medicine and Biology Society conference proceedings, 2013, pp. 7156-7159. IEEE Service Center 10.1109/EMBC.2013.6611208

Bauer, Stefan; Tessier, Jean; Krieter, Oliver; Nolte, Lutz-P.; Reyes, Mauricio (2013). Integrated Spatio-Temporal Segmentation of Longitudinal Brain Tumor Imaging Studies. In: Menze, Bjoern; Langs, Georg; Montillo, Albert; Kelm, Michael; Müller, Henning; Tu, Zhuowen (eds.) Medical Computer Vision. Large Data in Medical Imaging. Lecture Notes in Computer Science: Vol. 8331 (pp. 74-83). Springer International Publishing 10.1007/978-3-319-05530-5_8

2012

Bauer, Stefan; Ritacco, Lucas E.; Boesch, Chris; Nolte, Lutz-P.; Reyes, Mauricio (2012). Automatic Scan Planning for Magnetic Resonance Imaging of the Knee Joint. Annals of biomedical engineering, 40(9), pp. 2033-42. Cambridge: Springer 10.1007/s10439-012-0552-1

Lu, Huanxiang; Van der Zwaag, Wietske; Nolte, Lutz-Peter; Reyes, Mauricio (2012). Geometric and Intensity EPI Distortion Correction for 7T fMRI Using Simultaneous Classification and Registration. In: Proceedings of ESMRMB 2012. Lisbon, Portugal. 4-6 October 2012.

Schulz, Arndt P.; Reimers, Nils; Wipf, Felix; Vallotton, Michel; Bonaretti, Serena; Kozic, Nina; Reyes, Mauricio; Kienast, Benjamin J. (2012). Evidence Based Development of a Novel Lateral Fibula Plate (VariAx Fibula) Using a Real CT Bone Data Based Optimization Process During Device Development. Open orthopaedics journal, 6(1), pp. 1-7. Sharjah: Bentham Open 10.2174/1874325001206010001

Bousleiman, Habib; Seiler, Christof; Iizuka, Tateyuki; Nolte, Lutz-Peter; Reyes, Mauricio (2012). Population-Based Design of Mandibular Plates Based on Bone Quality and Morphology. In: Ayache, Nicholas; Delingette, Hervé; Golland, Pollina; Mori, Kensaku (eds.) Medical Image Computing and Computer-Assisted Intervention – MICCAI 2012. Lecture notes in computer sciences: Vol. 15 (pp. 66-73). Berlin Heidelberg: Springer 10.1007/978-3-642-33415-3_9

Seiler, Christof; Pennec, Xavier; Reyes, Mauricio (2012). Simultaneous Multiscale Polyaffine Registration by Incorporating Deformation Statistics. In: Ayache, Nicholas; Delingette, Hervé; Golland, Polina (eds.) Medical Image Computing and Computer-Assisted Intervention – MICCAI 2012. Lecture Notes in Computer Science: Vol. 15 (pp. 130-137). Berlin Heidelberg: Springer 10.1007/978-3-642-33418-4_17

De Heras Ciechomski, Pablo; Constantinescu, Mihai; Garcia, Jaime; Olariu, Radu; Dindoyal, Irving; Le Huu, Serge; Reyes, Mauricio (2012). Development and implementation of a web-enabled 3D consultation tool for breast augmentation surgery based on 3D-image reconstruction of 2D pictures. Journal of medical internet research, 14(1), e21. Toronto: Centre of Global eHealth Innovation 10.2196/jmir.1903

2011

Kim, Yoon-Ji; Oh, Kyung-Min; Hong, Ji-Suk; Lee, Jeong-Hwa; Kim, Hyung-Min; Reyes, Mauricio; Cevidanes, Lucia H.S.; Park, Yang-Ho (2011). Do Patients Treated With Bimaxillary Surgery Have More Stable Condylar Positions Than Those Who Have Undergone Single-Jaw Surgery? Journal of oral and maxillofacial surgery, 70(9), pp. 2143-2152. Elsevier 10.1016/j.joms.2011.08.028

Bonaretti, Serena; Seiler, Christof; Boichon, Christelle; Büchler, Philippe; Reyes, Mauricio (2011). Mesh-based vs. Image-based Statistical Appearance Model of the Human Femur: a Preliminary Comparison Study for the Creation of Finite Element Meshes. In: Proceedings of the MICCAI Workshop on Mesh Processing in Medical Image Analysis. Westin Harbor Castle, Toronto, Canada. 18.09.2011.

Kim, Hyung Min; Jürgens, Philipp; Reyes, Mauricio (2011). Soft-Tissue Simulation for Cranio-Maxillofacial Surgery: Clinical Needs and Technical Aspects. In: Gefen, Amit (ed.) Patient-Specific Modeling in Tomorrow's Medicine. Studies in Mechanobiology, Tissue Engineering and Biomaterials: Vol. 09 (pp. 413-440). Berlin-Heidelberg: Springer 10.1007/8415_2011_105

Seiler, Christof; Pennec, Xavier; Ritacco, Lucas; Reyes, Mauricio (2011). Femur Specific Polyaffine Model to Regularize the Log-Domain Demons Registration. In: 10th SPIE Medical Imaging 2010. 10.1117/12.878316

Bauer, Stefan; Nolte, Lutz-Peter; Reyes, Mauricio (2011). Fully Automatic Segmentation of Brain Tumor Images using Support Vector Machine Classiffication in Combination with Hierarchical Conditional Random Field Regularization. In: Fichtinger, Gabor; Martel, Anne; Peters, Terry (eds.) Medical Image Computing and Computer-Assisted Intervention – MICCAI 2011. 14th International Conferenc. Lecture Notes in Computer Science: Vol. 6893 (pp. 354-361). Berlin: Springer 10.1007/978-3-642-23626-6_44

Bou Sleiman, Habib; Ritacco, Lucas; Nolte, Lutz-Peter; Reyes, Mauricio (2011). Minimization of Intra-Operative Shaping of Orthopaedic Fixation Plates: A Population-Based Design. In: Fichtinger, Gabor; Martel, Anne; Peters, Terry (eds.) Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2011. Lecture Notes in Computer Science: Vol. 14 (pp. 409-416). Berlin Heidelberg: Springer 10.1007/978-3-642-23629-7_50

Seiler, Christof; Pennec, Xavier; Reyes, Mauricio (2011). Geometry-Aware Multiscale Image Registration via OBBTree-Based Polyaffine Log-Demons. In: Gabor, Fichtinger; Martel, Anne; Peters, Terry (eds.) Medical Image Computing and Computer-Assisted Intervention – MICCAI 2011. 14th International Conference. Lecture Notes in Computer Science: Vol. 6892 (pp. 631-638). Berlin: Springer 10.1007/978-3-642-23629-7_77

Juergens, Philipp; Klug, Clemens; Krol, Zdzislaw; Beinemann, Jörg; Kim, Hyungmin; Reyes, Mauricio; Guevara-Rojas, Godoberto; Zeilhofer, Hans-Florian; Ewers, Rolf; Schicho, Kurt (2011). Navigation-Guided Harvesting of Autologous Iliac Crest Graft for Mandibular Reconstruction. Journal of oral and maxillofacial surgery, 69(11), pp. 2915-2923. Maryland Heights, Mo.: Elsevier 10.1016/j.joms.2010.12.045

Bauer, Stefan; Nolte, Lutz-Peter; Reyes, Mauricio (2011). Segmentation of brain tumor images based on atlas-registration combined with a Markov-Random-Field lesion growth model. In: ISBI'11: Proceedings of the 2011 IEEE international conference on Biomedical imaging (pp. 2018-2021). IEEE Press 10.1109/ISBI.2011.5872808

Jürgens, P.; Kim, H.; Forter, S.; Beinemann, J.; Zeilhofer, H.F.; Reyes, Mauricio; Schwenzer, K. (2011). Three-dimensional control of maxillary position--validation of a 3-d real time navigational prototype system for routine application in orthognathic surgery. International journal of oral & maxillofacial surgery, 40(10), p. 1064. Elsevier 10.1016/j.ijom.2011.07.131

Jürgens, P.; Kim, H.; Reyes, Mauricio (2011). Application of a new soft-tissue simulation strategy based on a mimic muscle template model to predict the outcome in orthognatic surgery. International journal of oral & maxillofacial surgery, 40(10), p. 1064. Elsevier 10.1016/j.ijom.2011.07.130

2010

Seiler, C.; Gazdhar, A.; Geiser, T.; Reyes, Mauricio; Gantenbein-Ritter, Benjamin (June 2010). Mesenchymal Stem Cell Classification during Differentiation Based on Shape Information (Unpublished). In: TERMIS -- Tissue Engineering and Regenerative Medicine International Society.

Lu, Huanxiang; Reyes, Mauricio; Šerifović, Amira; Weber, Stefan; Sakurai, Yasuo; Yamagata, Hitoshi; Cattin, Philippe C. (April 2010). Multi-modal diffeomorphic demons registration based on point-wise mutual information. In: ISBI'10: Proceedings of the 2010 IEEE international conference on Biomedical imaging (pp. 372-375). IEEE 10.1109/ISBI.2010.5490333

Lu, Huanxiang; Cattin, Philippe C; Reyes, Mauricio (2010). A Hybrid Multimodal Non-Rigid Registration of MR Images Based on Diffeomorphic Demons. In: 2010 Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) 2010 (pp. 5951-5954). IEEE 10.1109/IEMBS.2010.5627562

Bauer, Stefan; Seiler, Christof; Bardyn, Thibaut; Buechler, Philippe; Reyes, Mauricio (2010). Atlas-Based Segmentation of Brain Tumor Images Using a Markov Random Field-Based Tumor Growth Model and Non-Rigid Registration. In: 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) 2010 (pp. 4080-4083). IEEE 10.1109/IEMBS.2010.5627302

Kim, Hyung Min; Jürgens, Philipp; Nolte, Lutz-Peter; Reyes, Mauricio (2010). Anatomically-Driven Soft-Tissue Simulation Strategy for Cranio-Maxillofacial Surgery Using Facial Muscle Template Model. In: Jiang, Tianzi; Navab, Nassir; Pluim, Josien; Viergever, Max (eds.) Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2010. Lecture Notes in Computer Science: Vol. 6361 (pp. 61-68). Heidelberg: Springer 10.1007/978-3-642-15705-9_8

Bonaretti, Serena; Helgason, Benedikt; Seiler, Christof; Kistler, Michael; Reyes, Mauricio; Büchler, Philippe (2010). A statistical shape model of bone anatomical variability for finite element assessment of bone mechanics. In: Proceedings of the 17th Congress of the European Society of Biomechanics. University of Edinburgh, UK. 5-8 July 2010.

Dong, Xiao; Lu, Huanxiang; Sakurai, Yasuo; Yamagata, Hitoshi; Zheng, Guoyan; Reyes, Mauricio (2010). Automated Intervertebral Disc Detection from Low Resolution, Sparse MRI Images for the Planning of Scan Geometries. In: Wang, Fei; Yan, Pingkun; Suzuki, Kenji; Shen, Dinggang (eds.) Machine learning in Medical Imaging (MLMI) - MICCAI 2010 Workshop. Lecture Notes in Computer Science: Vol. 6357 (pp. 10-17). Berlin: Springer 10.1007/978-3-642-15948-0_2

Bardyn, Thibaut; Reyes, Mauricio; Larrea, Xabier; Büchler, Philippe (2010). Influence of Smoothing on Voxel-Based Mesh Accuracy in Micro-Finite Element. In: Miller, Karol; Nielsen, Pourl M F (eds.) Computational Biomechanics for Medicine (pp. 85-93). New York: Springer 10.1007/978-1-4419-5874-7_10

Stamatakos, G.; Dionysiou, D.; Kolokotroni, E.; Georgiadi, E.; Roniotis, A.; Sakkalis, V.; Coveney, P.; Wan, S.; Manos, S.; Zasada, S.; Folarin, A.; Büchler, P.; Bardyn, T.; Bauer, S.; Reyes, Mauricio; Bily, T.; Bednar, V.; Karasek., M.; Graf, N.; Bohle, R.M.; ... (2010). CONTRA CANCRUM AT THE PROJECT LEVEL: The ContraCancrum Oncosimulator: Integrating Biomechanisms Across Scales in the Clinical Context. In: Stamatakos, G.; Dionysiou, D. (eds.) Proceedings of the 4th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation. Athens, Greece. 08.09.-09.09.2010.

Marias, K.; Sakkalis, V.; Roniotis, A.; Karatzanis, I.; Stamatakos, G.; Dionysiou, D.; Giatili, S.; Uzunoglou, N.; Graf, N.; Bohle, R.; Meese, E.; Stenzhorn, H.; Kim, Y.-J.; Coveney, P.; Zasada, S.; Wan, S.; Folarin, A.; Büchler, P.; Bardyn, T.; Bauer, S.; ... (2010). Clinically Oriented Translational Cancer Multilevel Modelling: The ContraCancrum project (Unpublished). In: Proceedings of the Virtual Physiological Human Conference 2010.

Marias, K.; Sakkalis, V.; Roniotis, A.; Karatzanis, I.; Stamatakos, G.; Dionysiou, D.; Giatili, S.; Uzunoglou, N.; Graf, N.; Bohle, R.; Meese, E.; Stenzhorn, H.; Kim, Y.-J.; Coveney, P.; Zasada, S.; Wan, S.; Folarin, A.; Büchler, P.; Bardyn, T.; Bauer, S.; ... (2010). CONTRACANCRUM AT THE PROJECT LEVEL: Clinically Oriented Translational Cancer Multilevel Modelling. In: Stamatakos, G.; Dionysiou, D. (eds.) Proceedings of the 4th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation. Athens, Greece. 08.09.-09.09.2010.

Bauer, Stefan; Reyes, Mauricio (2010). A Markov-Random-Field-Based Biomechanical Tumor Growth Model for Atlas-Based Segmentation of Brain Tumor Images. In: Proceedings of the 4th International Advanced Research Workshop on In Silico Oncology and Cancer Investigation.

2009

Kim, Hyungmin; Jürgens, Philipp; Nolte, Lutz P.; Weber, Stefan; Zeilhofer, Hans-Florian; Reyes, Mauricio (2009). Anatomically considered, fast soft-tissue simulation for cranio-maxillofacial surgery (Unpublished). In: Computer Aided Surgery around the Head.

Bardyn, T.; Reyes, Mauricio; Boyd, S.; Büchler, Philippe (2009). Influence of smoothing on voxel-based mesh accuracy in micro finite-element.

Blanc, Remi; Reyes, Mauricio; Seiler, Christof; Székely, Gabor (2009). Conditional variability of statistical shape models based on surrogate variables. In: Medical Image Computing and Computer-Assisted Intervention MICCAI 2009. Lecture Notes in Computer Science (pp. 84-91). Springer

Seiler, Christof; Weber, Stefan; Schmidt, Walter; Fischer, Felix; Reimers, Nils; Reyes, Mauricio (2009). Automatic landmark propagation for left and right symmetry assessment of tibia and femur: A computational anatomy based approach. In: 9th Annual Meeting of the International Society for Computer Assisted Surgery.

Schmidt, Walter; Reyes, Mauricio; Fischer, Felix; Geesink, Ruud; Nolte, Lutz; Racanelli, Joseph; Reimers, Nils (2009). Quantifying human knee anthropometric differences between ethnic groups and gender using shape analysis. In: Annual Meeting of the American Society of Biomechanics.

Seiler, Christof; Büchler, Philippe; Nolte, Lutz-Peter; Reyes, Mauricio; Paulsen, Rasmus (2009). Hierarchical Markov Random Fields Applied to Model Soft Tissue Deformations on Graphics Hardware. In: Magnenat-Thalmann, Nadia; Zhang, Jian J; Feng, David D (eds.) Recent Advances in the 3D Physiological Human (pp. 133-148). Heidelberg: Springer Verlag 10.1007/978-1-84882-565-9_9

Santos, TO; Weitzel, T; Klaeser, B; Reyes, Mauricio; Weber, Stefan (2009). Introducing computer-assisted surgery into combined PET/CT based biopsy treatments. In: 9th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery. Boston, MA. 17.06.-20.06.2009.

2008

Kozic, Nina; Reyes, Mauricio; Tannast, Moritz; Nolte, Lutz-Peter; Gonzalez Ballester, Miguel A. (June 2008). Assesment of anatomical criteria across populations using statistical shape models and level sets. In: 8th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery.

Larrea, Xabier; Reyes, Mauricio; Boyd, Stephen; Büchler, Philippe; Gonzalez, Miguel A. (2008). Automatic mesh smoothing for finite element modelling from 3D image data. (Unpublished). In: 16th Congress of the European Society of Biomechanics.

2007

Reyes, Mauricio A.; Gonzalez Ballester, Miguel A. (June 2007). Clustering of deformation modes for quantitative evaluation of statistical shape models. In: 7th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery. Heidelberg, Germany. 20.06.-23.06.2007.

Reyes, Mauricio; Linguraru, Marius George; Marias, Kostas; Ayache, Nicholas; Nolte, Lutz-Peter; Gonzalez Ballester, Miguel Angel (2007). Statistical shape analysis via principal factor analysis. In: 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007 (pp. 1216-1219). Washington DC, USA: IEEE 10.1109/ISBI.2007.357077

Linguraru, Marius George; Vercauteren, Tom; Reyes, Mauricio; González-Ballester, Miguel Ángel; Ayache, Nicholas (2007). Segmentation propagation from deformable atlases for brain mapping and analysis. Brain Research Journal, 1(4), pp. 269-287. Nova Science Publishers

Reyes, Mauricio; González-Ballester, M.A.; Linguraru, M.G. (2007). Statistical Bone Shape Analysis for Image Free Surgery. Acta Universitatis Cibiniensis, Technical Series, LV, pp. 121-129. De Gruyter

2005

Malandain, G.; Reyes, Mauricio (December 2005). La tomographie en mouvement. Pour la science, 338, pp. 132-137.

Reyes, Mauricio; Malandain, Grégoire; Koulibaly, Pierre Malick; Darcourt, Jacques (July 2005). Respiratory motion correction in emission tomography imaging. In: Fully Three-Dimensional Image Reconstruction Meeting in Radiology and Nuclear Medicine. Salt Lake City, Utah, USA.

Reyes, Mauricio (2005). Respiratory Motion Compensation in Emission Tomography (Unpublished). (Dissertation, University of Nice, Sophia Antipolis, France)

Reyes, Mauricio; Malandain, Grégoire; Koulibaly, Pierre Malick; Gonzalez Ballester, Miguel A.; Darcourt, Jacques (2005). Respiratory motion correction in emission tomography image reconstruction. In: Duncan, J.; Gerig, G. (eds.) Medical Image Computing and Computer-Assisted Intervention — MICCAI 2005. Lecture Notes in Computer Science: Vol. 3750 (pp. 369-376). Verlag: Springer

Gonzalez Ballester, Miguel Angel; Linguraru, Marius George; Reyes, Mauricio; Ayache, Nicholas (2005). On the adequacy of principal factor analysis for the study of shape variability. In: Fitzpatrick, J. Michael; Reinhardt, Joseph M. (eds.) SPIE Medical Imaging 2005: Image Processing. Proceeding SPIE: Vol. 5747 (p. 1392). SPIE Publishing 10.1117/12.593333

Reyes, Mauricio; Malandain, G.; Ayache, N.; Darcourt, J.; Koulibaly, P.M. (2005). Respiratory motion compensation within emission tomographic reconstruction (Unpublished). In: 52nd Annual Meeting of the Society of Nuclear Medicine. Toronto, Canada.

2004

Reyes, Mauricio; Malandain, Grégoire; Darcourt, Jacques (2004). Respiratory movement correction in emission tomography (Thème BIO 5279). Le Chesnay Cedex: Inria Sophia Antipolis

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