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Baby, Vincent; Ambroset, Chloé; Gaurivaud, Patrice; Falquet, Laurent; Boury, Christophe; Guichoux, Erwan; Jores, Joerg; Lartigue, Carole; Tardy, Florence; Sirand-Pugnet, Pascal (2023). Comparative genomics of Mycoplasma feriruminatoris, a fast-growing pathogen of wild Caprinae. Microbial genomics, 9(10) Microbiology Society 10.1099/mgen.0.001112
Akarsu, Hatice; Liljander, Anne; Younan, Mario; Brodard, Isabelle; Overesch, Gudrun; Glücks, Ilona; Labroussaa, Fabien; Kuhnert, Peter; Perreten, Vincent; Monecke, Stefan; Drexler, Jan Felix; Corman, Victor Max; Falquet, Laurent; Jores, Joerg (2022). Genomic Characterization and Antimicrobial Susceptibility of Dromedary-Associated Staphylococcaceae from the Horn of Africa. Applied and environmental microbiology, 88(21), e0114622. American Society for Microbiology 10.1128/aem.01146-22
Mansour, Moise; Giudice, Emmanuel; Xu, Xibing; Akarsu, Hatice; Bordes, Patricia; Guillet, Valérie; Bigot, Donna-Joe; Slama, Nawel; D'urso, Gaetano; Chat, Sophie; Redder, Peter; Falquet, Laurent; Mourey, Lionel; Gillet, Reynald; Genevaux, Pierre (2022). Substrate recognition and cryo-EM structure of the ribosome-bound TAC toxin of Mycobacterium tuberculosis. Nature Communications, 13(1), p. 2641. Springer Nature 10.1038/s41467-022-30373-w
Hill, Virginia; Akarsu, Hatice; Sánchez Barbarroja, Rubén; Cippà, Valentina L.; Kuhnert, Peter; Heller, Martin; Falquet, Laurent; Heller, Manfred; Stoffel, Michael H.; Labroussaa, Fabien; Jores, Joerg (2021). Minimalistic mycoplasmas harbor different functional toxin-antitoxin systems. PLoS genetics, 17(10), e1009365. Public Library of Science 10.1371/journal.pgen.1009365
Dylus, David; Pillonel, Trestan; Opota, Onya; Wüthrich, Daniel; Seth-Smith, Helena M. B.; Egli, Adrian; Leo, Stefano; Lazarevic, Vladimir; Schrenzel, Jacques; Laurent, Sacha; Bertelli, Claire; Blanc, Dominique S.; Neuenschwander, Stefan; Ramette, Alban; Falquet, Laurent; Imkamp, Frank; Keller, Peter M.; Kahles, Andre; Oberhaensli, Simone; Barbié, Valérie; ... (2020). NGS-Based S. aureus Typing and Outbreak Analysis in Clinical Microbiology Laboratories: Lessons Learned From a Swiss-Wide Proficiency Test. Frontiers in Microbiology, 11, p. 591093. Frontiers 10.3389/fmicb.2020.591093
Labroussaa, Fabien; Thomann, Andreas; Nicholson, Pamela; Falquet, Laurent; Jores, Jörg (2020). Complete Genome Sequence of Mycoplasma feriruminatoris Strain IVB14/OD_0535, Isolated from an Alpine Ibex in a Swiss Zoo. Microbiology resource announcements, 9(12) American Society for Microbiology 10.1128/MRA.01528-19
Agüero, José Antonio; Akarsu, Hatice; Aguilar-Bultet, Lisandra; Oevermann, Anna; Falquet, Laurent (2020). Large-Scale Comparison of Toxin and Antitoxins in Listeria monocytogenes. Toxins, 12(1) MDPI 10.3390/toxins12010029
Akarsu, Hatice; Aguilar-Bultet, Lisandra; Falquet, Laurent (2019). deltaRpkm: an R package for a rapid detection of differential gene presence between related bacterial genomes. BMC bioinformatics, 20(1), p. 621. BioMed Central 10.1186/s12859-019-3234-2
Liljander, Anne; Sacchini, Flavio; Stoffel, Michael Hubert; Schieck, Elise; Stokar von Neuforn, Nadine; Labroussaa, Fabien; Heller, Martin; Salt, Jeremy; Frey, Joachim; Falquet, Laurent; Goovaerts, Danny; Jores, Jörg (2019). Reproduction of contagious caprine pleuropneumonia reveals the ability of convalescent sera to reduce hydrogen peroxide production in vitro. Veterinary research, 50(1), p. 10. BioMed Central 10.1186/s13567-019-0628-0
Jores, Jörg; Ma, Li; Ssajjakambwe, Paul; Schieck, Elise; Liljander, Anne; Chandran, Suchismita; Stoffel, Michael H.; Cippà, Valentina; Arfi, Yonathan; Assad-Garcia, Nacyra; Falquet, Laurent; Sirand-Pugnet, Pascal; Blanchard, Alain; Lartigue, Carole; Posthaus, Horst; Labroussaa, Fabien; Vashee, Sanjay (2019). Removal of a Subset of Non-essential Genes Fully Attenuates a Highly Virulent Mycoplasma Strain. Frontiers in Microbiology, 10(664), p. 664. Frontiers 10.3389/fmicb.2019.00664
Josi, Christoph; Bürki, Sibylle; Vidal, Sara; Dordet-Frisoni, Emilie; Citti, Christine; Falquet, Laurent; Pilo, Paola (2019). Large-Scale Analysis of the Mycoplasma bovis Genome Identified Non-essential, Adhesion- and Virulence-Related Genes. Frontiers in Microbiology, 10, p. 2085. Frontiers 10.3389/fmicb.2019.02085
Aguilar-Bultet, Lisandra; Nicholson, Pamela; Rychener, Lorenz; Dreyer, Margaux; Gözel, Bulent; Origgi, Francesco C; Oevermann, Anna; Frey, Joachim; Falquet, Laurent (2018). Genetic Separation of Listeria monocytogenes Causing Central Nervous System Infections in Animals. Frontiers in cellular and infection microbiology, 8(20), p. 20. Frontiers 10.3389/fcimb.2018.00020
Rychener, Lorenz; In-Albon, Saria Maria; Djordjevic, Steven P; Chowdhury, Piklu R; Ziech, Rosangela E; de Vargas, Agueda C; Frey, Joachim; Falquet, Laurent (2017). Clostridium chauvoei, an Evolutionary Dead-End Pathogen. Frontiers in Microbiology, 8, p. 1054. Frontiers 10.3389/fmicb.2017.01054
Liljander, Anne; Yu, Mingyan; O'Brien, Elizabeth; Heller, Martin; Nepper, Julia F; Weibel, Douglas B; Gluecks, Ilona; Younan, Mario; Frey, Joachim; Falquet, Laurent; Jores, Joerg (2015). Field-Applicable Recombinase Polymerase Amplification Assay for Rapid Detection of Mycoplasma capricolum subsp. capripneumoniae. Journal of clinical microbiology, 53(9), pp. 2810-2815. American Society for Microbiology 10.1128/JCM.00623-15
Frey, Joachim; Falquet, Laurent (2015). Patho-genetics of Clostridium chauvoei. Research in microbiology, 166(4), pp. 384-392. Elsevier 10.1016/j.resmic.2014.10.013
Cannarozzi, Gina Michelle; Plaza-Wuethrich, Sonia; Esfeld, Korinna; Larti, Stephanie; Wilson, Yi Song; Kebede, Dejene Girma; de Castro, Edouard; Chanyalew, Solomon; Blösch, Regula; Farinelli, Laurent; Lyons, Eric; Schneider, Michel; Falquet, Laurent; Kuhlemeier, Cris; Assefa, Kebebew; Tadele, Zerihun (2014). Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef). BMC Genomics, 15(1), p. 581. BioMed Central 10.1186/1471-2164-15-581
Falquet, Laurent; Liljander, Anne; Schieck, Elise; Gluecks, Ilona; Frey, Joachim; Jores, Joerg (2014). Complete Genome Sequences of Virulent Mycoplasma capricolum subsp. capripneumoniae Strains F38 and ILRI181. Genome Announcements, 2(5), e01041-14. American Society for Microbiology 10.1128/genomeA.01041-14
Aguilar Bultet, Lisandra; Calderon-Copete, Sandra P.; Frey, Joachim; Falquet, Laurent (2013). Draft Genome Sequence of the Virulent Avibacterium paragallinarum Serotype A Strain JF4211 and Identification of Two Toxins. Genome Announcements, 1(4), e00592-13. American Society for Microbiology 10.1128/genomeA.00592-13
Falquet, Laurent; Calderon-Copete, Sandra P.; Frey, Joachim (2013). Draft Genome Sequence of the Virulent Clostridium chauvoei Reference Strain JF4335. Genome Announcements, 1(4), e00593-13. American Society for Microbiology 10.1128/genomeA.00593-13
