Coarse-to-Fine Adversarial Networks and Zone-Based Uncertainty Analysis for NK/T-Cell Lymphoma Segmentation in CT/PET Images.

Hu, Xiaobin; Guo, Rui; Chen, Jieneng; Li, Hongwei; Waldmannstetter, Diana; Zhao, Yu; Li, Biao; Shi, Kuangyu; Menze, Bjoern (2020). Coarse-to-Fine Adversarial Networks and Zone-Based Uncertainty Analysis for NK/T-Cell Lymphoma Segmentation in CT/PET Images. IEEE journal of biomedical and health informatics, 24(9), pp. 2599-2608. Institute of Electrical and Electronics Engineers 10.1109/JBHI.2020.2972694

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Extranodal natural killer/T cell lymphoma (ENKL), nasal type is a kind of rare disease with a low survival rate that primarily affects Asian and South American populations. Segmentation of ENKL lesions is crucial for clinical decision support and treatment planning. This paper is the first study on computer-aided diagnosis systems for the ENKL segmentation problem. We propose an automatic, coarse-to-fine approach for ENKL segmentation using adversarial networks. In the coarse stage, we extract the region of interest bounding the lesions utilizing a segmentation neural network. In the fine stage, we use an adversarial segmentation network and further introduce a multi-scale L1 loss function to drive the network to learn both global and local features. The generator and discriminator are alternately trained by backpropagation in an adversarial fashion in a min-max game. Furthermore, we present the first exploration of zone-based uncertainty estimates based on Monte Carlo dropout technique in the context of deep networks for medical image segmentation. Specifically, we propose the uncertainty criteria based on the lesion and the background, and then linearly normalize them to a specific interval. This is not only the crucial criterion for evaluating the superiority of the algorithm, but also permits subsequent optimization by engineers and revision by clinicians after quantitatively understanding the main source of uncertainty from the background or the lesion zone. Experimental results demonstrate that the proposed method is more effective and lesion-zone stable than state-of-the-art deep-learning based segmentation model.

Item Type:

Journal Article (Original Article)

Division/Institute:

04 Faculty of Medicine > Department of Radiology, Neuroradiology and Nuclear Medicine (DRNN) > Clinic of Nuclear Medicine
10 Strategic Research Centers > ARTORG Center for Biomedical Engineering Research

UniBE Contributor:

Shi, Kuangyu

Subjects:

500 Science > 570 Life sciences; biology
600 Technology > 610 Medicine & health

ISSN:

2168-2194

Publisher:

Institute of Electrical and Electronics Engineers

Language:

English

Submitter:

Sabine Lanz

Date Deposited:

05 Jan 2021 17:34

Last Modified:

05 Jan 2021 17:34

Publisher DOI:

10.1109/JBHI.2020.2972694

PubMed ID:

32054593

BORIS DOI:

10.48350/149408

URI:

https://boris.unibe.ch/id/eprint/149408

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