CapiPy: python based GUI-application to assist in protein immobilization

Roura Padrosa, David; Marchini, Valentina; Paradisi, Francesca (2021). CapiPy: python based GUI-application to assist in protein immobilization (In Press). Bioinformatics Oxford University Press 10.1093/bioinformatics/btab030

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Protein immobilization, while widespread to unlock enzyme potential in biocatalysis, remains tied to a trial an error approach. Nonetheless, several databases and computational methods have been developed for protein characterization and their study. CapiPy is a user-friendly application for protein model creation and subsequent analysis with a special focus on the ease of use and interpretation of the results to help the users to make an informed decision on the immobilization approach which should be ideal for a protein of interest. The package has been tested with three separate random sets of 150 protein sequences from Uniprot with more than a 70% overall success rate

Item Type:

Journal Article (Original Article)

Division/Institute:

08 Faculty of Science > Department of Chemistry, Biochemistry and Pharmaceutical Sciences (DCBP)

UniBE Contributor:

Roura Padrosa, David; Marchini, Valentina and Paradisi, Francesca

Subjects:

500 Science > 540 Chemistry

ISSN:

1367-4803

Publisher:

Oxford University Press

Funders:

[4] Swiss National Science Foundation

Projects:

Projects 200021 not found.

Language:

English

Submitter:

Francesca Paradisi

Date Deposited:

02 Feb 2021 10:00

Last Modified:

03 Feb 2021 01:35

Publisher DOI:

10.1093/bioinformatics/btab030

PubMed ID:

33459767

BORIS DOI:

10.48350/151381

URI:

https://boris.unibe.ch/id/eprint/151381

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