Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation.

You, Suhang; Reyes, Mauricio (2022). Influence of contrast and texture based image modifications on the performance and attention shift of U-Net models for brain tissue segmentation. Frontiers in neuroimaging, 1(1012639), p. 1012639. Frontiers 10.3389/fnimg.2022.1012639

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Contrast and texture modifications applied during training or test-time have recently shown promising results to enhance the generalization performance of deep learning segmentation methods in medical image analysis. However, a deeper understanding of this phenomenon has not been investigated. In this study, we investigated this phenomenon using a controlled experimental setting, using datasets from the Human Connectome Project and a large set of simulated MR protocols, in order to mitigate data confounders and investigate possible explanations as to why model performance changes when applying different levels of contrast and texture-based modifications. Our experiments confirm previous findings regarding the improved performance of models subjected to contrast and texture modifications employed during training and/or testing time, but further show the interplay when these operations are combined, as well as the regimes of model improvement/worsening across scanning parameters. Furthermore, our findings demonstrate a spatial attention shift phenomenon of trained models, occurring for different levels of model performance, and varying in relation to the type of applied image modification.

Item Type:

Journal Article (Original Article)

Division/Institute:

10 Strategic Research Centers > ARTORG Center for Biomedical Engineering Research > ARTORG Center - AI in Medical Imaging Laboratory
10 Strategic Research Centers > ARTORG Center for Biomedical Engineering Research

UniBE Contributor:

You, Suhang, Reyes, Mauricio

Subjects:

600 Technology > 610 Medicine & health
500 Science > 570 Life sciences; biology

ISSN:

2813-1193

Publisher:

Frontiers

Language:

English

Submitter:

Pubmed Import

Date Deposited:

10 Aug 2023 10:32

Last Modified:

20 Aug 2023 02:37

Publisher DOI:

10.3389/fnimg.2022.1012639

PubMed ID:

37555149

Uncontrolled Keywords:

brain segmentation image augmentation network interpretability pixel attribution segmentation saliency maps

BORIS DOI:

10.48350/185329

URI:

https://boris.unibe.ch/id/eprint/185329

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