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Hinz, Aaron; Amado, André; Kassen, Rees; Bank, Claudia; Wong, Alex (2024). Unpredictability of the fitness effects of antimicrobial resistance mutations across environments in Escherichia coli. Molecular Biology and Evolution, 41(5) Oxford University Press 10.1093/molbev/msae086
Li, Juan; Amado, André; Bank, Claudia (2024). Rapid adaptation of recombining populations on tunable fitness landscapes. Molecular ecology, 33(10), e16900. Wiley 10.1111/mec.16900
Li, Juan; Bank, Claudia (2024). Dominance and multi-locus interaction. Trends in genetics, 40(4), pp. 364-378. Elsevier Current Trends 10.1016/j.tig.2023.12.003
Ghenu, Ana-Hermina; Marrec, Loïc; Bank, Claudia (2024). Challenges and pitfalls of inferring microbial growth rates from lab cultures. Frontiers in ecology and evolution, 11, pp. 1-19. Frontiers Media 10.3389/fevo.2023.1313500
Blanckaert, Alexandre; Sriram, Vedanth; Bank, Claudia (2023). In search of the Goldilocks zone for hybrid speciation II: hard times for hybrid speciation? Evolution, 77(10), pp. 2162-2172. Wiley 10.1093/evolut/qpad125
Marrec, Loïc; Bank, Claudia; Bertrand, Thibault (2023). Solving the stochastic dynamics of population growth. Ecology and evolution, 13(8), pp. 1-20. John Wiley & Sons, Inc. 10.1002/ece3.10295
Marrec, Loïc; Bank, Claudia (2023). Evolutionary rescue in a fluctuating environment: periodic versus quasi-periodic environmental changes. Proceedings of the Royal Society. Series B - biological sciences, 290(1999), pp. 1-12. Royal Society of London 10.1098/rspb.2023.0770
Ghenu, Ana-Hermina; Amado, André; Gordo, Isabel; Bank, Claudia (2023). Epistasis decreases with increasing antibiotic pressure but not temperature. Philosophical transactions of the Royal Society. Series B - biological sciences, 378(1877), pp. 1-13. Royal Society of London 10.1098/rstb.2022.0058
Rieder, Jessica; Kapopoulou, Adamandia; Bank, Claudia; Adrian-Kalchhauser, Irene (2023). Metagenomics and metabarcoding experimental choices and their impact on microbial community characterization in freshwater recirculating aquaculture systems. Environmental microbiome, 18(1), p. 8. 10.1186/s40793-023-00459-z
Wortel, Meike T; Agashe, Deepa; Bailey, Susan F; Bank, Claudia; Bisschop, Karen; Blankers, Thomas; Cairns, Johannes; Colizzi, Enrico Sandro; Cusseddu, Davide; Desai, Michael M; van Dijk, Bram; Egas, Martijn; Ellers, Jacintha; Groot, Astrid T; Heckel, David G; Johnson, Marcelle L; Kraaijeveld, Ken; Krug, Joachim; Laan, Liedewij; Lässig, Michael; ... (2023). Towards evolutionary predictions: Current promises and challenges. Evolutionary applications, 16(1), pp. 3-21. Wiley 10.1111/eva.13513
Amado, André; Li, Juan; Bank, Claudia (2023). STUN: forward-time simulation on TUnable fitNess landscapes in recombining populations. Bioinformatics advances, 3(1), vbad164. Oxford University Press 10.1093/bioadv/vbad164
Bank, Claudia (2022). Epistasis and Adaptation on Fitness Landscapes. Annual review of ecology, evolution, and systematics, 53(1), pp. 457-479. Annual Reviews Inc. 10.1146/annurev-ecolsys-102320-112153
Bank, Claudia; Schmitz, Mark A.; Morales-Arce, Ana Y. (2022). Evolutionary models predict potential mechanisms of escape from mutational meltdown. Frontiers in Virology, 2 Frontiers 10.3389/fviro.2022.886655
Lansch-Justen, Lucy; Cusseddu, Davide; Schmitz, Mark A; Bank, Claudia (2022). The extinction time under mutational meltdown driven by high mutation rates. Ecology and evolution, 12(7), e9046. John Wiley & Sons, Inc. 10.1002/ece3.9046
Stajic, Dragan; Bank, Claudia; Gordo, Isabel (2022). Adaptive potential of epigenetic switching during adaptation to fluctuating environments. Genome biology and evolution, 14(5) Oxford University Press 10.1093/gbe/evac065
Li, Juan; Schumer, Molly; Bank, Claudia (2022). Imbalanced segregation of recombinant haplotypes in hybrid populations reveals inter- and intrachromosomal Dobzhansky-Muller incompatibilities. PLoS genetics, 18(3), e1010120. Public Library of Science 10.1371/journal.pgen.1010120
Dias Louro, Marco António; Bettencourt-Dias, Mónica; Bank, Claudia (2021). Patterns of selection against centrosome amplification in human cell lines. PLoS computational biology, 17(5), e1008765. Public Library of Science 10.1371/journal.pcbi.1008765
Butlin, Roger K.; Servedio, Maria R.; Smadja, Carole M.; Bank, Claudia; Barton, Nicholas H.; Flaxman, Samuel M.; Giraud, Tatiana; Hopkins, Robin; Larson, Erica L.; Maan, Martine E.; Meier, Joana; Merrill, Richard; Noor, Mohamed A. F.; Ortiz-Barrientos, Daniel; Qvarnström, Anna (2021). Homage to Felsenstein 1981, or why are there so few/many species? Evolution, 75(5), pp. 978-988. Wiley 10.1111/evo.14235
Berdan, Emma L.; Blanckaert, Alexandre; Butlin, Roger K.; Bank, Claudia (2021). Deleterious mutation accumulation and the long-term fate of chromosomal inversions. PLoS genetics, 17(3), e1009411. Public Library of Science 10.1371/journal.pgen.1009411
Cote-Hammarlof, Pamela A; Fragata, Inês; Flynn, Julia; Mavor, David; Zeldovich, Konstantin B; Bank, Claudia; Bolon, Daniel N A (2021). The Adaptive Potential of the Middle Domain of Yeast Hsp90. Molecular Biology and Evolution, 38(2), pp. 368-379. Oxford University Press 10.1093/molbev/msaa211
Bank, Claudia (2020). Defining Theories in Evolution. In: The Theory of Evolution: Principles, Concepts, and Assumptions 35 (pp. 646-647). Elsevier Current Trends 10.1016/j.tree.2020.05.009
Blanckaert, Alexandre; Bank, Claudia; Hermisson, Joachim (2020). The limits to parapatric speciation 3: evolution of strong reproductive isolation in presence of gene flow despite limited ecological differentiation. Philosophical transactions of the Royal Society. Series B - biological sciences, 375(1806), p. 20190532. Royal Society of London 10.1098/rstb.2019.0532
Flynn, Julia M; Rossouw, Ammeret; Cote-Hammarlof, Pamela; Fragata, Inês; Mavor, David; Hollins, Carl; Bank, Claudia; Bolon, Daniel NA (2020). Comprehensive fitness maps of Hsp90 show widespread environmental dependence. eLife, 9 eLife Sciences Publications 10.7554/eLife.53810
Louro, Marco António Dias; Bettencourt-Dias, Mónica; Bank, Claudia (2020). Patterns of selection against centrosome amplification in human cell lines. (bioRxiv). Cold Spring Harbor Laboratory 10.1101/2020.01.24.918615
Seehausen, Ole; Butlin, Roger K.; Keller, Irene; Wagner, Catherine; Boughman, Janette W.; Hohenlohe, Paul A.; Peichel, Catherine L.; Saetre, Glenn-Peter; Bank, Claudia; Brännström, Åke; Brelsford, Alan; Clarkson, Chris S.; Eroukhmanoff, Fabrice; Feder, Jeffrey L.; Fischer, Martin; Foote, Andrew D.; Franchini, Paolo; Jiggins, Chris D.; Jones, Felicity C.; Lindholm, Anna K.; ... (2014). Genomics and the origin of species. Nature Reviews. Genetics, 15(3), pp. 176-192. Natue Publishing Group 10.1038/nrg3644
