Yilmaz, Bahtiyar

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2023

Jakob, Manuel O; Spari, Daniel; Sánchez Taltavull, Daniel; Salm, Lilian; Yilmaz, Bahtiyar; Doucet Ladevèze, Rémi; Mooser, Catherine; Pereyra, David; Ouyang, Ye; Schmidt, Theresa; Mattiola, Irene; Starlinger, Patrick; Stroka, Deborah; Tschan, Franziska; Candinas, Daniel; Gasteiger, Georg; Klose, Christoph S N; Diefenbach, Andreas; Gomez de Agüero, Mercedes and Beldi, Guido (2023). ILC3s restrict the dissemination of intestinal bacteria to safeguard liver regeneration after surgery. Cell reports, 42(3), p. 112269. Cell Press 10.1016/j.celrep.2023.112269

Birchenough, George M H; Schroeder, Bjoern O; Sharba, Sinan; Arike, Liisa; Recktenwald, Christian V; Puértolas-Balint, Fabiola; Subramani, Mahadevan V; Hansson, Karl T; Yilmaz, Bahtiyar; Lindén, Sara K; Bäckhed, Fredrik; Hansson, Gunnar C (2023). Muc2-dependent microbial colonization of the jejunal mucus layer is diet sensitive and confers local resistance to enteric pathogen infection. Cell reports, 42(2), p. 112084. Cell Press 10.1016/j.celrep.2023.112084

Papotto, Pedro H; Yilmaz, Bahtiyar; Pimenta, Gonçalo; Mensurado, Sofia; Cunha, Carolina; Fiala, Gina J; Gomes da Costa, Daniel; Gonçalves-Sousa, Natacha; Chan, Brian H K; Blankenhaus, Birte; Domingues, Rita G; Carvalho, Tânia; Hepworth, Matthew R; Macpherson, Andrew J; Allen, Judith E; Silva-Santos, Bruno (2023). Maternal γδ T cells shape offspring pulmonary type 2 immunity in a microbiota-dependent manner. Cell reports, 42(2), p. 112074. Cell Press 10.1016/j.celrep.2023.112074

Chandiwana, Panashe; Munjoma, Privilege Tendai; Mazhandu, Arthur John; Li, Jiaqi; Bärtschi, Isabel; Wyss, Jacqueline; Jordi, Sebastian Bruno Ulrich; Mazengera, Lovemore Ronald; Yilmaz, Bahtiyar; Misselwitz, Benjamin; Duri, Kerina (2023). Antenatal gut microbiome profiles and effect on pregnancy outcome in HIV infected and HIV uninfected women in a resource limited setting. BMC microbiology, 23(1), p. 4. BioMed Central 10.1186/s12866-022-02747-z

Marchukov, Dmitrij; Li, Jiaqi; Juillerat, Pascal; Misselwitz, Benjamin; Yilmaz, Bahtiyar (2023). Benchmarking microbial DNA enrichment protocols from human intestinal biopsies. Frontiers in genetics, 14(1184473), p. 1184473. Frontiers Media SA 10.3389/fgene.2023.1184473

Remund, Barblin; Yilmaz, Bahtiyar; Sokollik, Christiane (2023). D-Lactate: Implications for Gastrointestinal Diseases. Children, 10(6), p. 945. MDPI 10.3390/children10060945

2022

Yilmaz, Bahtiyar; Fuhrer, Tobias; Morgenthaler, Deborah; Krupka, Niklas; Wang, Daoming; Spari, Daniel; Candinas, Daniel; Misselwitz, Benjamin; Beldi, Guido; Sauer, Uwe; Macpherson, Andrew J (2022). Plasticity of the adult human small intestinal stoma microbiota. Cell host & microbe, 30(12), 1773-1787.e6. Cell Press 10.1016/j.chom.2022.10.002

Wyss, Jacqueline; Raselli, Tina; Wyss, Annika; Telzerov, Anja; Rogler, Gerhard; Krupka, Niklas; Yilmaz, Bahtiyar; Schmidt, Thomas SB; Misselwitz, Benjamin (2 December 2022). Development of non-alcoholic steatohepatitis is associated with gut microbiota but not oxysterol synthesis (bioRxiv). Cold Spring Harbor Laboratory 10.1101/2022.12.02.518833

Jordi, Sebastian Bruno Ulrich; Lang, Brian Matthew; Wyss, Jacqueline; Auschra, Bianca; Yilmaz, Bahtiyar; Krupka, Niklas; Greuter, Thomas; Schreiner, Philipp; Biedermann, Luc; Preisig, Martin; von Känel, Roland; Rogler, Gerhard; Begré, Stefan; Misselwitz, Benjamin (2022). The personality traits activity, self-reproach, and negative affect jointly predict clinical recurrence, depressive symptoms, and low quality of life in inflammatory bowel disease patients. Journal of gastroenterology, 57(11), pp. 848-866. Springer 10.1007/s00535-022-01902-7

Schneider, Romano; Kraljević, Marko; Peterli, Ralph; Rohm, Theresa V; Bosch, Angela J T; Low, Andy J Y; Keller, Lena; AlAsfoor, Shefaa; Häfliger, Simon; Yilmaz, Bahtiyar; Peterson, Caspar J; Lazaridis, Ioannis I; Vonaesch, Pascale; Delko, Tarik; Cavelti-Weder, Claudia (2022). Roux-en-Y gastric bypass with a long versus a short biliopancreatic limb improves weight loss and glycemic control in obese mice. Surgery for obesity and related diseases, 18(11), pp. 1286-1297. Elsevier 10.1016/j.soard.2022.06.286

Sudworth, Amanda; Segers, Filip M; Yilmaz, Bahtiyar; Guslund, Naomi C; Macpherson, Andrew J; Dissen, Erik; Qiao, Shuo-Wang; Inngjerdingen, Marit (2022). Innate lymphoid cell characterization in the rat and their correlation to gut commensal microbes. European journal of immunology, 52(5), pp. 717-729. Wiley 10.1002/eji.202149639

Rohm, Theresa V; Keller, Lena; Bosch, Angela J T; AlAsfoor, Shefaa; Baumann, Zora; Thomas, Amandine; Wiedemann, Sophia J; Steiger, Laura; Dalmas, Elise; Wehner, Josua; Rachid, Leila; Mooser, Catherine; Yilmaz, Bahtiyar; Fernandez Trigo, Nerea; Jauch, Annaise J; Wueest, Stephan; Konrad, Daniel; Henri, Sandrine; Niess, Jan H; Hruz, Petr; ... (2022). Targeting colonic macrophages improves glycemic control in high-fat diet-induced obesity. Communications biology, 5(1), p. 370. Springer Nature 10.1038/s42003-022-03305-z

Macpherson, Andrew J; Yilmaz, Bahtiyar (2022). Microbial drivers of DSS variability. Nature microbiology, 7(4), pp. 478-479. Springer Nature 10.1038/s41564-022-01097-w

Mossad, Omar; Batut, Bérénice; Yilmaz, Bahtiyar; Dokalis, Nikolaos; Mezö, Charlotte; Nent, Elisa; Nabavi, Lara Susann; Mayer, Melanie; Maron, Feres José Mocayar; Buescher, Joerg M; Gomez de Agüero, Mercedes; Szalay, Antal; Lämmermann, Tim; Macpherson, Andrew J; Ganal-Vonarburg, Stephanie C; Backofen, Rolf; Erny, Daniel; Prinz, Marco; Blank, Thomas (2022). Gut microbiota drives age-related oxidative stress and mitochondrial damage in microglia via the metabolite N6-carboxymethyllysine. Nature neuroscience, 25(3), pp. 295-305. Nature America 10.1038/s41593-022-01027-3

Fregolente, L.G.; Warncke, J.D.; van der Meer, J.; Schmidt, M.; Khatami, R.; Macpherson, A.J.; Yilmaz, B.; Bassetti, C.L.A. (2022). SPHYNCS: Gut microbiota composition is different in Narcolepsy type 1 and Narcolepsy Borderland. Sleep medicine, 100, S167. Elsevier 10.1016/j.sleep.2022.05.452

Chandiwana, Panashe; Munjoma, Privilege T; Mazhandu, Arthur J; Mazengera, Lovemore R; Misselwitz, Benjamin; Jordi, Sebastian B U; Yilmaz, Bahtiyar; Duri, Kerina (2022). Antenatal and postpartum immunological markers levels in women with HIV infection and malnutrition in a low resource setting: A pilot study. European journal of inflammation, 20, 1721727X2211392. Sage 10.1177/1721727X221139261

2021

Sánchez-Taltavull, Daniel; Castelo-Székely, Violeta; Murugan, Shaira; Hamley, Jonathan I. D.; Rollenske, Tim; Ganal-Vonarburg, Stephanie C.; Büchi, Isabel; Keogh, Adrian; Li, Hai; Salm, Lilian; Spari, Daniel; Yilmaz, Bahtiyar; Zimmermann, Jakob; Gerfin, Michael; Roldan, Edgar; Beldi, Guido (2021). Regular testing of asymptomatic healthcare workers identifies cost-efficient SARS-CoV-2 preventive measures. PLoS ONE, 16(11), e0258700. Public Library of Science 10.1371/journal.pone.0258700

Dietmann, Anelia; Wenzel, Elena; van der Meer, Julia; Ringli, Maya; Warncke, Jan D; Edwards, Ellen; Schmidt, Markus H; Bernasconi, Corrado A; Nirkko, Arto; Strub, Mathias; Miano, Silvia; Manconi, Mauro; Acker, Jens; von Manitius, Sigrid; Baumann, Christian R; Valko, Philip O; Yilmaz, Bahtiyar; Brunner, Andreas-David; Tzovara, Athina; Zhang, Zhongxing; ... (2021). The Swiss Primary Hypersomnolence and Narcolepsy Cohort study (SPHYNCS): Study protocol for a prospective, multicentre cohort observational study. Journal of sleep research, 30(5), e13296. Wiley 10.1111/jsr.13296

Yilmaz, Bahtiyar; Ruckstuhl, Lisa; Müllhaupt, Beat; Magenta, Lorenzo; Kuster, Melanie Harrer; Clerc, Olivier; Torgler, Ralph; Semmo, Nasser (2021). Pilot Sub-Study of the Effect of Hepatitis C Cure by Glecaprevir/Pibrentasvir on the Gut Microbiome of Patients with Chronic Hepatitis C Genotypes 1 to 6 in the Mythen Study. Pharmaceuticals, 14(9) MDPI 10.3390/ph14090931

Papotto, Pedro H; Yilmaz, Bahtiyar; Silva-Santos, Bruno (2021). Crosstalk between γδ T cells and the microbiota. Nature microbiology, 6(9), pp. 1110-1117. Springer Nature 10.1038/s41564-021-00948-2

Denoth, Luisa; Juillerat, Pascal; Kremer, Andreas E; Rogler, Gerhard; Scharl, Michael; Yilmaz, Bahtiyar; Bluemel, Sena (2021). Modulation of the Mucosa-Associated Microbiome Linked to the PTPN2 Risk Gene in Patients with Primary Sclerosing Cholangitis and Ulcerative Colitis. Microorganisms, 9(8) MDPI 10.3390/microorganisms9081752

Caparrós, Esther; Wiest, Reiner; Scharl, Michael; Rogler, Gerhard; Gutiérrez Casbas, Ana; Yilmaz, Bahtiyar; Wawrzyniak, Marcin; Francés, Rubén (2021). Dysbiotic microbiota interactions in Crohn's disease. Gut microbes, 13(1), p. 1949096. Landes Bioscience 10.1080/19490976.2021.1949096

Zhang, Yawen; Feng, Lijun; Wang, Xin; Fox, Mark; Luo, Liang; Du, Lijun; Chen, Binrui; Chen, Xiaoli; He, Huiqin; Zhu, Shuwen; Hu, Zhefang; Chen, Shujie; Long, Yanqin; Zhu, Yubin; Xu, Li; Deng, Yanyong; Misselwitz, Benjamin; Lang, Brian M; Yilmaz, Bahtiyar; Kim, John J; ... (2021). Low fermentable oligosaccharides, disaccharides, monosaccharides, and polyols diet compared with traditional dietary advice for diarrhea-predominant irritable bowel syndrome: a parallel-group, randomized controlled trial with analysis of clinical and microbiological factors associated with patient outcomes. The American journal of clinical nutrition, 113(6), pp. 1531-1545. Oxford University Press 10.1093/ajcn/nqab005

Yilmaz, Bahtiyar; Mooser, Catherine; Keller, Irene; Li, Hai; Zimmermann, Jakob; Bosshard, Lars; Fuhrer, Tobias; Gomez de Agüero, Mercedes; Fernandez Trigo, Nerea; Tschanz-Lischer, Heidi; Limenitakis, Julien P.; Hardt, Wolf-Dietrich; McCoy, Kathleen; Stecher, Bärbel; Excoffier, Laurent; Sauer, Uwe; Ganal-Vonarburg, Stephanie C.; Macpherson, Andrew J. (2021). Long-term evolution and short-term adaptation of microbiota strains and sub-strains in mice. Cell host & microbe, 29(4), 650-663.e9. Cell Press 10.1016/j.chom.2021.02.001

Juanola, Oriol; Hassan, Mohsin; Kumar, Pavitra; Yilmaz, Bahtiyar; Keller, Irene; Simillion, Cedric; Engelmann, Cornelius; Tacke, Frank; Dufour, Jean-François; De Gottardi, Andrea; Moghadamrad, Sheida (2021). Intestinal microbiota drives cholestasis-induced specific hepatic gene expression patterns. Gut microbes, 13(1), pp. 1-20. Taylor & Francis Group 10.1080/19490976.2021.1911534

Singh, Sumnima; Thompson, Jessica A; Yilmaz, Bahtiyar; Li, Hai; Weis, Sebastian; Sobral, Daniel; Truglio, Mauro; Aires da Silva, Frederico; Aguiar, Sandra; Carlos, Ana Rita; Rebelo, Sofia; Cardoso, Silvia; Gjini, Erida; Nuñez, Gabriel; Soares, Miguel P (2021). Loss of α-gal during primate evolution enhanced antibody-effector function and resistance to bacterial sepsis. Cell host & microbe, 29(3), 347-361.e12. Cell Press 10.1016/j.chom.2020.12.017

Rogler, Gerhard; Scharl, Michael; Spalinger, Marianne; Yilmaz, Bahtiyar; Zaugg, Michael; Hersberger, Martin; Schreiner, Philipp; Biedermann, Luc; Herfarth, Hans (2021). Diet and Inflammatory Bowel Disease: What Quality Standards Should Be Applied in Clinical and Laboratory Studies? Molecular nutrition & food research, 65(5), e2000514. Wiley 10.1002/mnfr.202000514

2020

Katsidzira, Leolin; Mudombi, Wisdom F; Makunike-Mutasa, Rudo; Yilmaz, Bahtiyar; Blank, Annika; Rogler, Gerhard; Macpherson, Andrew; Vavricka, Stephan; Gangaidzo, Innocent; Misselwitz, Benjamin (2020). Inflammatory bowel disease in sub-Saharan Africa: a protocol of a prospective registry with a nested case-control study. BMJ open, 10(12), e039456. BMJ Publishing Group 10.1136/bmjopen-2020-039456

Humbel, Fabienne; Rieder Harrell, Jessica; Franc, Yannick; Juillerat, Pascal; Scharl, Michael; Misselwitz, Benjamin; Schreiner, Philipp; Begré, Stefan; Rogler, Gerhard; von Känel, Roland; Yilmaz, Bahtiyar; Biedermann, Luc (2020). Association of Alterations in Intestinal Microbiota With Impaired Psychological Function in Patients With Inflammatory Bowel Diseases in Remission. Clinical gastroenterology and hepatology, 18(9), 2019-2029.e11. Elsevier 10.1016/j.cgh.2019.09.022

Li, Hai; Limenitakis, Julien Periclis Jean; Greiff, Victor; Yilmaz, Bahtiyar; Schären, Olivier Pascal; Urbaniak, Camilla; Zünd, Mirjam; Lawson, Melissa; Young, Ian D.; Rupp, Sandra; Heikenwälder, Mathias; McCoy, Kathleen; Hapfelmeier, Siegfried; Ganal-Vonarburg, Stephanie C.; Macpherson, Andrew J. (2020). Mucosal or systemic microbiota exposures shape the B cell repertoire. Nature, 584(7820), pp. 274-278. Springer Nature 10.1038/s41586-020-2564-6

Mezö, Charlotte; Dokalis, Nikolaos; Mossad, Omar; Staszewski, Ori; Neuber, Jana; Yilmaz, Bahtiyar; Schnepf, Daniel; Gomez de Agüero, Mercedes; Ganal-Vonarburg, Stephanie C.; Macpherson, Andrew J.; Meyer-Luehmann, Melanie; Staeheli, Peter; Blank, Thomas; Prinz, Marco; Erny, Daniel (2020). Different effects of constitutive and induced microbiota modulation on microglia in a mouse model of Alzheimer's disease. Acta neuropathologica communications, 8(1), p. 119. BioMed Central 10.1186/s40478-020-00988-5

2019

Sorribas, Marcel; Jakob, Manuel O.; Yilmaz, Bahtiyar; Li, Hai; Stutz, David; Noser, Yannik; De Gottardi, Andrea; Moghadamrad, Sheida; Hassan, Mohsin; Albillos, Agustin; Francés, Ruben; Juanola, Oriol; Spadoni, Ilaria; Rescigno, Maria; Wiest, Reiner (2019). FXR modulates the gut-vascular barrier by regulating the entry sites for bacterial translocation in experimental cirrhosis. Journal of hepatology, 71(6), pp. 1126-1140. Elsevier 10.1016/j.jhep.2019.06.017

Jakob, Manuel O.; Sánchez-Taltavull, Daniel; Yilmaz, Bahtiyar; Malinka, Thomas; Mooser, Catherine; Spari, Daniel; Salm, Lilian A.; Freiburghaus, Katrin; Pereyra, David; Hapfelmeier, Siegfried; Masoodi, Mojgan; Starlinger, Patrick; Stroka, Deborah; Tschan, Franziska; Candinas, Daniel; Gomez de Agüero, Mercedes; Beldi, Guido (19 September 2019). Compartmentalization of intestinal bacteria by hepatic ILC3s prevents infections after surgery (bioRxiv). Cold Spring Harbor Laboratory 10.1101/773150

Schreiner, Philipp; Yilmaz, Bahtiyar; Rossel, Jean-Benoît; Franc, Yannick; Misselwitz, Benjamin; Scharl, Michael; Zeitz, Jonas; Frei, Pascal; Greuter, Thomas; Vavricka, Stephan R; Pittet, Valérie; Siebenhüner, Alexander; Juillerat, Pascal; von Känel, Roland; Macpherson, Andrew J; Rogler, Gerhard; Biedermann, Luc (2019). Vegetarian or gluten-free diets in patients with inflammatory bowel disease are associated with lower psychological well-being and a different gut microbiota, but no beneficial effects on the course of the disease. United european gastroenterology journal, 7(6), pp. 767-781. Sage 10.1177/2050640619841249

Yilmaz, Bahtiyar; Juillerat, Pascal; Øyås, Ove; Ramon, Charlotte; Bravo, Francisco Damian; Franc, Yannick; Fournier, Nicolas; Michetti, Pierre; Mueller, Christoph; Geuking, Markus; Pittet, Valerie E H; Maillard, Michel H; Rogler, Gerhard; Wiest, Reiner; Stelling, Jörg; Macpherson, Andrew J. (2019). Publisher Correction: Microbial network disturbances in relapsing refractory Crohn's disease. Nature medicine, 25(4), p. 701. Springer Nature 10.1038/s41591-019-0411-9

Yilmaz, Bahtiyar; Juillerat, Pascal; Øyås, Ove; Ramon, Charlotte; Bravo, Francisco Damian; Franc, Yannick; Fournier, Nicolas; Michetti, Pierre; Müller, Christoph; Geuking, Markus; Pittet, Valerie E H; Maillard, Michel H; Rogler, Gerhard; Wiest, Reiner; Stelling, Jörg; Macpherson, Andrew J. (2019). Microbial network disturbances in relapsing refractory Crohn's disease. Nature medicine, 25(2), pp. 323-336. Nature Publishing Group 10.1038/s41591-018-0308-z

2018

Yilmaz, Bahtiyar; Li, Hai (2018). Gut Microbiota and Iron: The Crucial Actors in Health and Disease. Pharmaceuticals, 11(4) MDPI 10.3390/ph11040098

Uchimura, Yasuhiro; Fuhrer, Tobias; Li, Hai; Lawson, Melissa A.; Zimmermann, Michael; Yilmaz, Bahtiyar; Zindel, Joel; Ronchi, Francesca; Sorribas Olivera, Marcel; Hapfelmeier, Siegfried; Ganal-Vonarburg, Stephanie C.; Gomez de Agüero, Mercedes; McCoy, Kathleen D.; Sauer, Uwe; Macpherson, Andrew J. (2018). Antibodies Set Boundaries Limiting Microbial Metabolite Penetration and the Resultant Mammalian Host Response. Immunity, 49(3), 545-559.e5. Cell Press 10.1016/j.immuni.2018.08.004

Yilmaz, Bahtiyar; Schibli, Susanne; Macpherson, Andrew; Sokollik, Christiane (2018). D-lactic Acidosis: Successful Suppression of D-lactate-Producing Lactobacillus by Probiotics. Pediatrics, 142(3) American Academy of Pediatrics 10.1542/peds.2018-0337

Macpherson, Andrew; Yilmaz, Bahtiyar (2018). Antibodies that lte our intestinal microbes. Science immunology, 3(23) American Association for the Advancement of Science 10.1126/sciimmunol.aat4037

Macpherson, Andrew; Yilmaz, Bahtiyar; Limenitakis, Julien Periclis Jean; Ganal-Vonarburg, Stephanie (2018). IgA Function in Relation to the Intestinal Microbiota. Annual review of immunology, 36, pp. 359-381. Annual Reviews 10.1146/annurev-immunol-042617-053238

Yilmaz, Bahtiyar; Spalinger, Marianne R; Biedermann, Luc; Franc, Yannick; Fournier, Nicolas; Rossel, Jean-Benoit; Juillerat, Pascal; Rogler, Gerhard; Macpherson, Andrew J.; Scharl, Michael (2018). The presence of genetic risk variants within PTPN2 and PTPN22 is associated with intestinal microbiota alterations in Swiss IBD cohort patients. PLoS ONE, 13(7), e0199664. Public Library of Science 10.1371/journal.pone.0199664

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