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Zwyer, Michaela; Rutaihwa, Liliana K; Windels, Etthel; Hella, Jerry; Menardo, Fabrizio; Sasamalo, Mohamed; Sommer, Gregor; Schmülling, Lena; Borrell, Sonia; Reinhard, Miriam; Dötsch, Anna; Hiza, Hellen; Stritt, Christoph; Sikalengo, George; Fenner, Lukas; De Jong, Bouke C; Kato-Maeda, Midori; Jugheli, Levan; Ernst, Joel D; Niemann, Stefan; ... (2023). Back-to-Africa introductions of Mycobacterium tuberculosis as the main cause of tuberculosis in Dar es Salaam, Tanzania. PLoS pathogens, 19(4), e1010893. Public Library of Science 10.1371/journal.ppat.1010893
Menardo, Fabrizio; Rutaihwa, Liliana K; Zwyer, Michaela; Borrell, Sonia; Comas, Iñaki; Conceição, Emilyn Costa; Coscolla, Mireia; Cox, Helen; Joloba, Moses; Dou, Horng-Yunn; Feldmann, Julia; Fenner, Lukas; Fyfe, Janet; Gao, Qian; García de Viedma, Darío; Garcia-Basteiro, Alberto L; Gygli, Sebastian M; Hella, Jerry; Hiza, Hellen; Jugheli, Levan; ... (2021). Local adaptation in populations of Mycobacterium tuberculosis endemic to the Indian Ocean Rim [version 2; peer review: 3 approved]. F1000Research, 10, p. 60. F1000 Research Ltd 10.12688/f1000research.28318.2
Rutaihwa, Liliana K.; Menardo, Fabrizio; Stucki, David; Gygli, Sebastian M.; Ley, Serej D.; Malla, Bijaya; Feldmann, Julia; Borrell, Sonia; Beisel, Christian; Middelkoop, Kerren; Carter, E. Jane; Diero, Lameck; Ballif, Marie; Jugheli, Levan; Reither, Klaus; Fenner, Lukas; Brites, Daniela; Gagneux, Sebastien (2019). Multiple Introductions of Mycobacterium tuberculosis Lineage 2–Beijing Into Africa Over Centuries (In Press). Frontiers in ecology and evolution, 7, p. 112. Frontiers Media 10.3389/fevo.2019.00112
Malla, Bijaya; Aebersold, Daniel; Dal Pra, Alan (2018). Protocol for serum exosomal miRNAs analysis in prostate cancer patients treated with radiotherapy. Journal of translational medicine, 16(1), p. 223. BioMed Central 10.1186/s12967-018-1592-6
Malla, Bijaya; Zaugg, Kathrin; Vassella, Erik; Aebersold, Daniel; Dal Pra, Alan (2017). Exosomes and Exosomal MicroRNAs in Prostate Cancer Radiation Therapy. International journal of radiation oncology, biology, physics, 98(5), pp. 982-995. Elsevier 10.1016/j.ijrobp.2017.03.031
Stucki, David; Brites, Daniela; Jeljeli, Leïla; Coscolla, Mireia; Liu, Qingyun; Trauner, Andrej; Fenner, Lukas; Rutaihwa, Liliana; Borrell, Sonia; Luo, Tao; Gao, Qian; Kato-Maeda, Midori; Ballif, Marie; Egger, Matthias; Macedo, Rita; Mardassi, Helmi; Moreno, Milagros; Vilanova, Griselda Tudo; Fyfe, Janet; Globan, Maria; ... (2016). Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages. Nature genetics, 48(12), pp. 1535-1543. Nature America 10.1038/ng.3704
Malla, Bijaya; Stucki, David; Borrell, Sonia; Feldmann, Julia; Maharjan, Bhagwan; Shrestha, Bhawana; Fenner, Lukas; Gagneux, Sebastien (2012). First insights into the phylogenetic diversity of Mycobacterium tuberculosis in Nepal. PLoS ONE, 7(12), e52297. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0052297
Stucki, David; Malla, Bijaya; Hostettler, Simon; Huna, Thembela; Feldmann, Julia; Yeboah-Manu, Dorothy; Borrell, Sonia; Fenner, Lukas; Comas, Iñaki; Coscollà, Mireia; Gagneux, Sebastien (2012). Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages. PLoS ONE, 7(7), e41253. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0041253
Fenner, Lukas; Malla, Bijaya; Ninet, Béatrice; Dubuis, Olivier; Stucki, David; Borrell, Sonia; Huna, Thembela; Bodmer, Thomas; Egger, Matthias; Gagneux, Sebastien (2011). "Pseudo-Beijing": evidence for convergent evolution in the direct repeat region of Mycobacterium tuberculosis. PLoS ONE, 6(9), e24737. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0024737
