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Wegner, Fanny; Cabrera-Gil, Blanca; Tanguy, Araud; Beckmann, Christiane; Beerenwinkel, Niko; Bertelli, Claire; Carrara, Matteo; Cerutti, Lorenzo; Chen, Chaoran; Cordey, Samuel; Dumoulin, Alexis; du Plessis, Louis; Friedli, Marc; Gerth, Yannick; Greub, Gilbert; Härri, Adrian; Hirsch, Hans; Howald, Cedric; Huber, Michael; Imhof, Alexander; ... (2024). How much should we sequence? An analysis of the Swiss SARS-CoV-2 surveillance effort. (In Press). Microbiology spectrum, e0362823. American Society for Microbiology 10.1128/spectrum.03628-23
Benvenga, Vanni; Cuénod, Aline; Purushothaman, Srinithi; Dasen, Gottfried; Weisser, Maja; Bassetti, Stefano; Roloff, Tim; Siegemund, Martin; Heininger, Ulrich; Bielicki, Julia; Wehrli, Marianne; Friderich, Paul; Frei, Reno; Widmer, Andreas; Herzog, Kathrin; Fankhauser, Hans; Nolte, Oliver; Bodmer, Thomas; Risch, Martin; Dubuis, Olivier; ... (2024). Historic methicillin-resistant Staphylococcus aureus: expanding current knowledge using molecular epidemiological characterization of a Swiss legacy collection. Genome medicine, 16(23) BioMed Central 10.1186/s13073-024-01292-w
Cuénod, Aline; Aerni, Martina; Bagutti, Claudia; Bayraktar, Banu; Boz, Efe Serkan; Carneiro, Cynthia Beisert; Casanova, Carlo; Coste, Alix T; Damborg, Peter; van Dam, Dick; Demirci, Mehmet; Drevinek, Pavel; Dubuis, Olivier; Fernandez, José; Greub, Gilbert; Hrabak, Jaroslav; Yiğitler, Gülen Hürkal; Hurych, Jakub; Jensen, Thøger Gorm; Jost, Géraldine; ... (2023). Quality of MALDI-TOF Mass Spectra in Routine Diagnostics: Results from an International External Quality Assessment including 36 Laboratories from 12 countries using 47 challenging bacterial strains. Clinical microbiology and infection, 29(2), pp. 190-199. Elsevier 10.1016/j.cmi.2022.05.017
Wegner, Fanny; Roloff, Tim; Huber, Michael; Cordey, Samuel; Ramette, Alban; Gerth, Yannick; Bertelli, Claire; Stange, Madlen; Seth-Smith, Helena M B; Mari, Alfredo; Leuzinger, Karoline; Cerutti, Lorenzo; Harshman, Keith; Xenarios, Ioannis; Le Mercier, Philippe; Bittel, Pascal; Neuenschwander, Stefan; Opota, Onya; Fuchs, Jonas; Panning, Marcus; ... (2022). External quality assessment of SARS-CoV-2-sequencing: An ESGMD-SSM pilot trial across 15 European laboratories. Journal of clinical microbiology, 60(1), e0169821. American Society for Microbiology 10.1128/JCM.01698-21
Goncalves Cabecinhas, Ana Rita; Roloff, Tim; Stange, Madlen; Bertelli, Claire; Huber, Michael; Ramette, Alban; Chen, Chaoran; Nadeau, Sarah; Gerth, Yannick; Yerly, Sabine; Opota, Onya; Pillonel, Trestan; Schuster, Tobias; Metzger, Cesar M J A; Sieber, Jonas; Bel, Michael; Wohlwend, Nadia; Baumann, Christian; Koch, Michel C.; Bittel, Pascal; ... (2021). SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021-Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing. Microorganisms, 9(4), p. 677. MDPI 10.3390/microorganisms9040677
Ragozzino, Silvio; Goldenberger, Daniel; Wright, Patrick R; Zimmerli, Stefan; Mühlethaler, Konrad; Neofytos, Dionysios; Riat, Arnaud; Boggian, Katia; Nolte, Oliver; Conen, Anna; Fankhauser, Hans; Schreiber, Peter W; Zbinden, Reinhard; Lamoth, Frederic; Khanna, Nina (2021). Distribution of Aspergillus species and prevalence of azole resistance in respiratory samples from Swiss Tertiary Care Hospitals. Open Forum Infectious Diseases, 9(2) Oxford University Press 10.1093/ofid/ofab638
