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Andriollo, Tommy; Ashrafi, Sohrab; Arlettaz, Raphaël; Ruedi, Manuel (2018). Porous barriers? Assessment of gene flow within and among sympatric long‐eared bat species. Ecology and evolution, 8(24), pp. 12841-12854. John Wiley & Sons, Inc. 10.1002/ece3.4714
Currat, Mathias; Ruedi, Manuel; Petit, Rémy J.; Excoffier, Laurent (2008). The hidden side of invasions: massive introgression by local genes. Evolution, 62(8), pp. 1908-1920. Hoboken, N.J.: Wiley 10.1111/j.1558-5646.2008.00413.x
Ruedi, Manuel; Walter, Simon; Fischer, Martin C.; Scaravelli, Dino; Excoffier, Laurent; Heckel, Gerald (2008). Italy as a major Ice Age refuge area for the bat Myotis myotis (Chiroptera: Vespertilionidae) in Europe. Molecular Ecology, 17(7), pp. 1801-1814. Oxford: Wiley-Blackwell 10.1111/j.1365-294X.2008.03702.x
Berthier, Pierre; Excoffier, Laurent; Ruedi, Manuel (2006). Replacement of mtDNA and cryptic hybridization between two sibling bat species Myotis myotis and Myotis blythii. Proceedings of the Royal Society. Series B - biological sciences, 273(1605), pp. 3101-3123. London: Royal Society of London 10.1098/rspb.2006.3680
