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Subissi, Lorenzo; Otieno, James Richard; Worp, Nathalie; Attar Cohen, Homa; Oude Munnink, Bas B; Abu-Raddad, Laith J; Alm, Erik; Barakat, Amal; Barclay, Wendy S; Bhiman, Jinal N; Caly, Leon; Chand, Meera; Chen, Mark; Cullinane, Ann; de Oliveira, Tulio; Drosten, Christian; Druce, Julian; Effler, Paul; El Masry, Ihab; Faye, Adama; ... (2024). An updated framework for SARS-CoV-2 variants reflects the unpredictability of viral evolution. Nature medicine, 30(9), pp. 2400-2403. Springer Nature 10.1038/s41591-024-02949-0
Ramphal, Yajna; Tegally, Houriiyah; San, James Emmanuel; Reichmuth, Martina Larissa; Hofstra, Marije; Wilkinson, Eduan; Baxter, Cheryl; de Oliveira, Tulio; Moir, Monika (2024). Understanding the Transmission Dynamics of the Chikungunya Virus in Africa. Pathogens, 13(7), p. 605. MDPI AG 10.3390/pathogens13070605
Tegally, Houriiyah; Moir, Monika; Everatt, Josie; Giovanetti, Marta; Scheepers, Cathrine; Wilkinson, Eduan; Subramoney, Kathleen; Makatini, Zinhle; Moyo, Sikhulile; Amoako, Daniel G; Baxter, Cheryl; Althaus, Christian L; Anyaneji, Ugochukwu J; Kekana, Dikeledi; Viana, Raquel; Giandhari, Jennifer; Lessells, Richard J; Maponga, Tongai; Maruapula, Dorcas; Choga, Wonderful; ... (2022). Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa. Nature medicine, 28(9), pp. 1785-1790. Nature Publishing Group 10.1038/s41591-022-01911-2
Happi, Christian; Adetifa, Ifedayo; Mbala, Placide; Njouom, Richard; Nakoune, Emmanuel; Happi, Anise; Ndodo, Nnaemeka; Ayansola, Oyeronke; Mboowa, Gerald; Bedford, Trevor; Neher, Richard A; Roemer, Cornelius; Hodcroft, Emma; Tegally, Houriiyah; O'Toole, Áine; Rambaut, Andrew; Pybus, Oliver; Kraemer, Moritz U G; Wilkinson, Eduan; Isidro, Joana; ... (2022). Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus [perspective]. PLoS biology, 20(8), e3001769. Public Library of Science 10.1371/journal.pbio.3001769
Subissi, Lorenzo; von Gottberg, Anne; Thukral, Lipi; Worp, Nathalie; Oude Munnink, Bas B; Rathore, Surabhi; Abu-Raddad, Laith J; Aguilera, Ximena; Alm, Erik; Archer, Brett N; Attar Cohen, Homa; Barakat, Amal; Barclay, Wendy S; Bhiman, Jinal N; Caly, Leon; Chand, Meera; Chen, Mark; Cullinane, Ann; de Oliveira, Tulio; Drosten, Christian; ... (2022). An early warning system for emerging SARS-CoV-2 variants. Nature medicine, 28(6), pp. 1110-1115. Springer Nature 10.1038/s41591-022-01836-w
Giovanetti, Marta; Fonseca, Vagner; Wilkinson, Eduan; Tegally, Houriiyah; San, Emmanuel James; Althaus, Christian L; Xavier, Joilson; Nanev Slavov, Svetoslav; Viala, Vincent Louis; Ranieri Jerônimo Lima, Alex; Ribeiro, Gabriela; Souza-Neto, Jayme A; Fukumasu, Heidge; Lehmann Coutinho, Luiz; Venancio da Cunha, Rivaldo; Freitas, Carla; Campelo de A E Melo, Carlos F; Navegantes de Araújo, Wildo; Do Carmo Said, Rodrigo Fabiano; Almiron, Maria; ... (2022). Replacement of the Gamma by the Delta variant in Brazil: Impact of lineage displacement on the ongoing pandemic. Virus evolution, 8(1), veac024. Oxford University Press 10.1093/ve/veac024
Viana, Raquel; Moyo, Sikhulile; Amoako, Daniel G; Tegally, Houriiyah; Scheepers, Cathrine; Althaus, Christian L.; Anyaneji, Ugochukwu J; Bester, Phillip A; Boni, Maciej F; Chand, Mohammed; Choga, Wonderful T; Colquhoun, Rachel; Davids, Michaela; Deforche, Koen; Doolabh, Deelan; du Plessis, Louis; Engelbrecht, Susan; Everatt, Josie; Giandhari, Jennifer; Giovanetti, Marta; ... (2022). Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa. Nature, 603(7902), pp. 679-686. Macmillan Journals Ltd. 10.1038/s41586-022-04411-y
Konings, Frank; Perkins, Mark D; Kuhn, Jens H; Pallen, Mark J; Alm, Erik J; Archer, Brett N; Barakat, Amal; Bedford, Trevor; Bhiman, Jinal N; Caly, Leon; Carter, Lisa L; Cullinane, Anne; de Oliveira, Tulio; Druce, Julian; El Masry, Ihab; Evans, Roger; Gao, George F; Gorbalenya, Alexander E; Hamblion, Esther; Herring, Belinda L; ... (2021). SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse [comment]. Nature microbiology, 6(7), pp. 821-823. Springer Nature 10.1038/s41564-021-00932-w
Vogels, Chantal B F; Breban, Mallery I; Ott, Isabel M; Alpert, Tara; Petrone, Mary E; Watkins, Anne E; Kalinich, Chaney C; Earnest, Rebecca; Rothman, Jessica E; Goes de Jesus, Jaqueline; Morales Claro, Ingra; Magalhães Ferreira, Giulia; Crispim, Myuki A E; Singh, Lavanya; Tegally, Houriiyah; Anyaneji, Ugochukwu J; Hodcroft, Emma B.; Mason, Christopher E; Khullar, Gaurav; Metti, Jessica; ... (2021). Multiplex qPCR discriminates variants of concern to enhance global surveillance of SARS-CoV-2. PLoS biology, 19(5), e3001236. Public Library of Science 10.1371/journal.pbio.3001236
