08 Faculty of Science > School of Biomedical and Precision Engineering (SBPE) > Personalised Medicine

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Number of items at this level: 31.

2024

Croci, Eleonora; Hess, Hanspeter; Warmuth, Fabian; Künzler, Marina; Börlin, Sean; Baumgartner, Daniel; Müller, Andreas Marc; Gerber, Kate; Mündermann, Annegret (2024). Fully automatic algorithm for detecting and tracking anatomical shoulder landmarks on fluoroscopy images with artificial intelligence. European radiology, 34(1), pp. 270-278. Springer-Verlag 10.1007/s00330-023-10082-8

2023

Menze, Johanna; Croci, Eleonora; Andersen, Michael Skipper; Hess, Hanspeter; Ferguson, Stephen J.; Müller, Andreas Marc; Mündermann, Annegret; Gerber, Kate (1 August 2023). Towards a Musculoskeletal Shoulder Model Depicting Glenohumeral Translations Considering Bony, Ligamentous and Muscular Stability Constraints. In: XXIX Congress of International/Japanese Society of Biomechanics. Fukuoka, Japan. 30th July - 3rd August 2023.

Oswald, Alexandra; Menze, Johanna; Jacxsens, Matthijs; Rojas, Tomás; Zumstein, Matthias A.; Ferguson, Stephen J.; Gerber, Kate (9 July 2023). Automated Shoulder Morphing to Assess Subject Specific Biomechanics of Rotator Cuff Tear and Osteoarthritis. In: 28th Congress of the European Society of Biomechanics. July 9-12, 2023.

Menze, Johanna; Leuthard, Louis; Wirth, Barbara; Audigé, Laurent; De Pieri, Enrico; Gerber, Kate; Ferguson, Stephen J (2023). The effect of pathological shoulder rhythm on muscle and joint forces after reverse shoulder arthroplasty, a numerical analysis. Clinical biomechanics, 107, p. 106030. Elsevier 10.1016/j.clinbiomech.2023.106030

Fliri, Jon; Menze, Johanna; Zumstein, Matthias A.; Ferguson, Stephen J.; Burger, Jürgen; Gerber, Kate (July 2023). Sensitivity study of the hill muscle model in a musculoskeletal shoulder model. In: 28th Congress of the European Society of Biomechanics. Maastricht, the Netherlands. July 9-12, 2023.

Lerch, Till; Meier, Malin Kristin; Steppacher, Simon Damian; Gerber, Nicolas; Zeng, Guodong; Schmaranzer, Florian (June 2023). Pelvis MRI for cinematic rendering of Pelvis 3D models using fast T1 images and deep learning (Unpublished). In: Swiss Congress of Radiology (SCR), 2023. Davos. June 2023.

Meier, Malin Kristin; Scheuber, Samira; Hanke, Markus Simon; Haefeli, Pascal Cyrill; Ruckli, Adrian Cyrill; Liechti, Emanuel Francis; Gerber, Nicolas; Lerch, Till Dominic; Tannast, Moritz; Siebenrock, Klaus Arno; Steppacher, Simon Damian; Schmaranzer, Florian (2023). Does the dGEMRIC Index Recover 3 Years After Surgical FAI Correction and an Initial dGEMRIC Decrease at 1-Year Follow-up? A Controlled Prospective Study. The American journal of sports medicine, 51(7), pp. 1808-1817. Sage 10.1177/03635465231167854

Ruckli, Adrian C.; Nanavati, Andreas K.; Meier, Malin K.; Lerch, Till D.; Steppacher, Simon D.; Vuilleumier, Sébastian; Boschung, Adam; Vuillemin, Nicolas; Tannast, Moritz; Siebenrock, Klaus A.; Gerber, Nicolas; Schmaranzer, Florian (2023). A Deep Learning Method for Quantification of Femoral Head Necrosis Based on Routine Hip MRI for Improved Surgical Decision Making. Journal of personalized medicine, 13(1), p. 153. MDPI 10.3390/jpm13010153

Hess, Hanspeter; Ruckli, Adrian C.; Bürki, Finn; Gerber, Nicolas; Menzemer, Jennifer; Burger, Jürgen; Schär, Michael; Zumstein, Matthias A.; Gerber, Kate (2023). Deep-Learning-Based Segmentation of the Shoulder from MRI with Inference Accuracy Prediction. Diagnostics, 13(10), p. 1668. MDPI 10.3390/diagnostics13101668

2022

Hess, Hanspeter; Gussarow, Philipp; Rojas, J Tomás; Weber, Stefan; Hayoz, Annabel; Zumstein, Matthias A.; Gerber, Kate (13 December 2022). Fully Automatic Analysis of Posterosuperior Full-Thickness Rotator Cuff Tears from MRI. In: Proceedings of The 20th Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery. 10.29007/fnjd

Ruckli, Adrian Cyrill; Schmaranzer, Florian; Meier, Malin K; Lerch, Till D; Steppacher, Simon D; Tannast, Moritz; Zeng, Guodong; Burger, Jürgen; Siebenrock, Klaus A; Gerber, Nicolas; Gerber, Kate (2022). Automated quantification of cartilage quality for hip treatment decision support. International journal of computer assisted radiology and surgery, 17(11), pp. 2011-2021. Springer 10.1007/s11548-022-02714-z

Hess, Hanspeter; Herren, Michael; Gerber, Nicolas; Scheidegger, Olivier; Schär, Michael; Daneshvar, Keivan; Zumstein, Matthias A.; Gerber, Kate (11 June 2022). Automatic quantification of fatty infiltration of the supraspinatus from MRI. In: CAOS 2022: The 21st Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery. 10.29007/xq8m

2021

Menze, Johanna; Hess, Hanspeter; Ferguson, Stephen J.; Zumstein, Matthias; Gerber, Nicolas; Burger, Jürgen; Gerber, Kate (July 2021). How does the glenoid size affect rotator cuff loading? A musculoskeletal analysis. In: 26th Congress of the European Society of Biomechanics (ESBiomech 2021). Milan, Italy.

Menze, Johanna Franziska; Hess, Hanspeter; Ferguson, Stephen J.; Zumstein, Matthias; Gerber, Nicolas; Burger, Jürgen; Gerber, Kate (July 2021). A Musculoskeletal Parameter Study of Scapula Characteristics Affecting Rotator Cuff Muscle Forces (In Press). In: XXVIII congress of the international society of biomechanics (ISB 2021). Stockholm.

Menze, Johanna Franziska; Rojas, Tomás; Ferguson, Stephen J.; Zumstein, Matthias; DePieri, Enrico; Gerber, Kate (July 2021). Tendon transfers reestablish shoulder rotations after rotator cuff lesions (In Press). In: 18t International Symposium on Computer Simulation in Biomechanics (ISB TGCS 2021). Virtual.

Hess, Hanspeter; Zumstein, M.; Dommer, L.; Schär, M.; Hayoz, A.; Zeng, Guodong; Ruckli, Adrian Cyrill; Burger, Jürgen; Gerber, Nicolas; Gerber, Kate (4 June 2021). Automatic shoulder bone segmentation from CT arthrograms based on deep learning. International Journal of Computer Assisted Radiology and Surgery, 16(S1), pp. 90-91. Springer

Ruckli, Adrian Cyrill; Schmaranzer, F.; Lerch, T.; Boschung, A.; Steppacher, S.; Burger, Jürgen; Tannast, M.; Siebenrock, K.; Gerber, Nicolas; Gerber, Kate (4 June 2021). Deep learning for automatic quantification of AVN of the femoral head on 3D MRI in patients eligible for joint preserving surgery: A pilot study. International Journal of Computer Assisted Radiology and Surgery, 16(S1), S85-S86. Springer-Verlag

Meier, Malin Kristin; Zeng, Guodong; Boschung, Adam; Lerch, Till; Burger, Jürgen; Gerber, Nicolas; Gerber, Kate; Siebenrock, Klaus-Arno; Tannast, Moritz; Steppacher, Simon Damian; Schmaranzer, Florian (June 2021). Deep Learning Based Fully Automated 3D MRI Models Of Hip Cartilage And Labrum: A Pilot Study. In: EFORT Congress (Virtual).

Lerch, Till D.; Zwingelstein, Sébastien; Schmaranzer, Florian; Boschung, Adam; Hanke, Markus S.; Todorski, Inga A. S.; Steppacher, Simon D.; Gerber, Nicolas; Zeng, Guodong; Siebenrock, Klaus A.; Tannast, Moritz (2021). Posterior Extra-articular Ischiofemoral Impingement Can Be Caused by the Lesser and Greater Trochanter in Patients With Increased Femoral Version: Dynamic 3D CT–Based Hip Impingement Simulation of a Modified FABER Test. Orthopaedic journal of sports medicine, 9(5), p. 2325967121990629. Sage Publications 10.1177/2325967121990629

Ruckli, Adrian Cyrill; Schmaranzer, Florian; Lerch, Till; Boschung, Adam; Steppacher, Simon; Burger, Jürgen; Tannast, Moritz; Siebenrock, Klaus; Gerber, Kate; Gerber, Nicolas (17 May 2021). Deep learning for fully-automatic quantification of avascular necrosis of the femoral head on 3D hip MRI in young patients eligible for joint preserving hip surgery: A pilot study (Unpublished). In: Bern Data Science Day 2021. Bern. 23.04.2021. 10.5281/zenodo.4767398

Zeng, Guodong; Schmaranzer, Florian; Lerch, Till D.; Boschung, Adam; Zheng, Guoyan; Burger, Jürgen; Gerber, Kate; Tannast, Moritz; Siebenrock, K.; Kim, Young-Jo; Novais, Eduardo; Gerber, Nicolas (23 April 2021). Entropy Guided Unsupervised Domain Adaptation for Cross-Center Hip Cartilage Segmentation from MRI (Unpublished). In: Bern Data Science Day 2021. 23.04.2021. 10.5281/zenodo.4767469

Ruckli, Adrian Cyrill; Lerch, Till; Boschung, Adam; Steppacher, Simon; Gerber, Nicolas; Gerber, Kate; Burger, Jürgen; Tannast, Moritz; Siebenrock, Klaus; Schmaranzer, Florian (April 2021). Deep learning for fully-automatic quantification of avascular necrosis of the femoral head on 3D hip MRI in young patients eligible for joint preserving hip surgery: A pilot study. Skeletal radiology, 50, p. 1060. Springer

Zeng, Guodong; Schmaranzer, Florian; Degonda, Celia; Gerber, Nicolas; Gerber, Kate; Tannast, Moritz; Burger, Jürgen; Siebenrock, Klaus A.; Zheng, Guoyan; Lerch, Till (2021). MRI-based 3D models of the hip joint enables radiation-free computer-assisted planning of periacetabular osteotomy for treatment of hip dysplasia using deep learning for automatic segmentation. European journal of radiology open, 8, p. 100303. Elsevier 10.1016/j.ejro.2020.100303

Ruckli, Adrian Cyrill; Vuilleumier, S; Boschung, A; Lerch, Till; Steppacher, Simon Damian; Tannast, Moritz; Siebenrock, Klaus-Arno; Burger, Jürgen; Gerber, Nicolas; Schmaranzer, Florian (2021). Deep learning for fully-automatic quantification of avascular necrosis of the femoral head on 3D hip MRI in young patients eligible for joint preserving hip surgery: A pilot study (Unpublished). In: SCR (Swiss Congress of Radiology).

Zeng, Guodong; Degonda, Celia; Boschung, Adam; Schmaranzer, Florian; Gerber, Nicolas; Siebenrock, Klaus-A.; Steppacher, Simon D.; Tannast, Moritz; Lerch, Till (2021). Three-Dimensional Magnetic Resonance Imaging Bone Models of the Hip Joint Using Deep Learning: Dynamic Simulation of Hip Impingement for Diagnosis of Intra- and Extra-articular Hip Impingement. Orthopaedic journal of sports medicine, 9(12), pp. 1-11. Sage Publications 10.1177/23259671211046916

2020

Lerch, T; Zeng, Guodong; Schmaranzer, F; Boschung, A; Gerber, Nicolas; Siebenrock, K-A; Tannast, M (November 2020). Fast Automatic Bone Segmentation Using Machine Learning for MRI Based Dynamic 3d Hip Impingement Simulation Based on t1 VIBE DIXON of the Pelvis in Routine MRI (Unpublished). In: RSNA Annual Meeting (Radiological Society of North America).

Lerch, Till; Schmaranzer, Florian; Boschung, Adam; Zeng, Guodong; Gerber, Nicolas; Siebenrock, Klaus-Arno; Tannast, Moritz (November 2020). Valgus and Increased Acetabular Version Can Aggravate Posterior Extraarticular Ischiofemoral Femoroacetabular Impingement in Patients With Increased Femoral Version in Dynamic Impingement Simulation (Unpublished). In: RSNA Annual Meeting (Radiological Society of North America).

Zeng, Guodong; Schmaranzer, Florian; Lerch, Till; Boschung, Adam; Zheng, Guoyan; Burger, Jürgen; Gerber, Kate; Tannast, Moritz; Siebenrock, Klaus-Arno; Kim, Young-Jo; Novais, Eduardo N.; Gerber, Nicolas (1 September 2020). Entropy Guided Unsupervised Domain Adaptation for Cross-Center Hip Cartilage Segmentation from MRI. Lecture notes in computer science, 12261, pp. 447-456. Springer 10.1007/978-3-030-59710-8_44

Gerber, Nicolas; Carrillo, Fabio; Abegg, Daniel; Sutter, Reto; Zheng, Guoyan; Fürnstahl, Philipp (2020). Evaluation of CT-MR image registration methodologies for 3D preoperative planning of forearm surgeries. Journal of orthopaedic research, 38(9), pp. 1920-1930. Wiley 10.1002/jor.24641

Lerch, T.; Zeng, G.; Schmaranzer, F.; Gerber, N.; Siebenrock, K.-A.; Tannast, M. (July 2020). RPS 1010a - Computer-assisted diagnosis of hip dysplasia and femoroacetabular impingement FAI using automatic reconstruction of MRI-based 3D models of the hip joint: a deep learning-based study. In: ECR (European Congress of Radiology) 11 (p. 355). Springer

2019

Zeng, Guodong; Zheng, Guoyan (2019). Holistic decomposition convolution for effective semantic segmentation of medical volume images. Medical image analysis, 57, pp. 149-164. Elsevier 10.1016/j.media.2019.07.003

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