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Ngoepe, Nare; Merz, Alenya; King, Leighton; Wienhues, Giulia; Kishe, Mary A; Mwaiko, Salome; Misra, Pavani; Grosjean, Martin; Matthews, Blake; Mustaphi, Colin Courtney; Heiri, Oliver; Cohen, Andrew; Tinner, Willy; Muschick, Moritz; Seehausen, Ole (2024). Testing alternative hypotheses for the decline of cichlid fish in Lake Victoria using fish tooth time series from sediment cores. Biology Letters, 20(3) The Royal Society 10.1098/rsbl.2023.0604
Frei, David; Mwaiko, Salome; Seehausen, Ole; Feulner, Philine G. D. (2024). Ecological disturbance reduces genomic diversity across an Alpine whitefish adaptive radiation. Evolutionary applications, 17(2) Wiley 10.1111/eva.13617
Muschick, Moritz; Jemmi, Eliane; Lengacher, Nicholas; Hänsch, Stephanie; Wales, Nathan; Kishe, Mary A; Mwaiko, Salome; Dieleman, Jorunn; Lever, Mark Alexander; Salzburger, Walter; Verschuren, Dirk; Seehausen, Ole (2023). Ancient DNA is preserved in fish fossils from tropical lake sediments. Molecular ecology, 32(22), pp. 5913-5931. Wiley 10.1111/mec.17159
Ngoepe, Nare; Muschick, Moritz; Kishe, Mary A; Mwaiko, Salome; Temoltzin-Loranca, Yunuén; King, Leighton; Courtney Mustaphi, Colin; Heiri, Oliver; Wienhues, Giulia; Vogel, Hendrik; Cuenca-Cambronero, Maria; Tinner, Willy; Grosjean, Martin; Matthews, Blake; Seehausen, Ole (2023). A continuous fish fossil record reveals key insights into adaptive radiation. Nature, 622(7982), pp. 315-320. Springer Nature 10.1038/s41586-023-06603-6
Meier, Joana; McGee, Matthew D; Marques, David A; Mwaiko, Salome; Kishe, Mary; Wandera, Sylvester; Neumann, Dirk; Mrosso, Hilary; Chapman, Lauren J; Chapman, Colin A; Kaufman, Les; Taabu-Munyaho, Anthony; Wagner, Catherine E; Bruggmann, Rémy; Excoffier, Laurent; Seehausen, Ole (2023). Cycles of fusion and fission enabled rapid parallel adaptive radiations in African cichlids. Science, 381(6665), eade2833. American Association for the Advancement of Science 10.1126/science.ade2833
Wienhues, Giulia; Temoltzin-Loranca, Yunuen; Vogel, Hendrik; Morlock, Marina A.; Cohen, Andrew S.; Anselmetti, Flavio S.; Bernasconi, Stefano M.; Jaggi, Madalina; Tylmann, Wojciech; Kishe, Mary A.; King, Leighton Rebecca; Ngoepe, Nare; Courtney-Mustaphi, Colin J.; Muschick, Moritz; Matthews, Blake; Mwaiko, Salome; Seehausen, Ole; Tinner, Willy; Grosjean, Martin (2023). From desiccation to wetlands and outflow: Rapid re-filling of Lake Victoria during the Latest Pleistocene 14–13 ka. Journal of Great Lakes Research, p. 102246. Elsevier 10.1016/j.jglr.2023.102246
van Rijssel, Jacco C; Moser, Florian N; Mwaiko, Salome; Seehausen, Ole (2022). Strong species structure but weak geographical structure in demersal Lake Victoria cichlids. Ecology and evolution, 12(12), e9669. John Wiley & Sons, Inc. 10.1002/ece3.9669
Rick, Jessica A; Junker, Julian; Kimirei, Ismael A; Sweke, Emmanuel A; Mosille, Julieth B; Dinkel, Christian; Mwaiko, Salome; Seehausen, Ole; Wagner, Catherine E (2021). The Genetic Population Structure of Lake Tanganyika’s Lates Species Flock, an Endemic Radiation of Pelagic Top Predators. Journal of heredity, 113(2), pp. 145-159. Oxford University Press 10.1093/jhered/esab072
Carleton, Karen L.; Conte, Matthew A.; Malinsky, Milan; Nandamuri, Sri Pratima; Sandkam, Benjamin A.; Meier, Joana I.; Mwaiko, Salome; Seehausen, Ole; Kocher, Thomas D. (2020). Movement of transposable elements contributes to cichlid diversity. Molecular Ecology, 29(24), pp. 4956-4969. Wiley-Blackwell 10.1111/mec.15685
Feller, Anna F.; Selz, Oliver M.; McGee, Matthew D.; Meier, Joana I.; Mwaiko, Salome; Seehausen, Ole (2020). Rapid generation of ecologically relevant behavioral novelty in experimental cichlid hybrids. Ecology and evolution, 10(14), pp. 7445-7462. Wiley 10.1002/ece3.6471
Mc Gee, Matthew D.; Borstein, Samuel R.; Meier, Joana I.; Marques, David A.; Mwaiko, Salome; Taabu, Anthony; Kishe, Mary A.; O’Meara, Brian; Bruggmann, Rémy; Excoffier, Laurent; Seehausen, Ole (2020). The ecological and genomic basis of explosive adaptive radiation. Nature, 586(7827), pp. 75-79. Springer Nature 10.1038/s41586-020-2652-7
Junker, Julian; Rick, Jessica A.; McIntyre, Peter B.; Kimirei, Ismael; Sweke, Emmanuel A.; Mosille, Julieth B.; Wehrli, Bernhard; Dinkel, Christian; Mwaiko, Salome; Seehausen, Ole; Wagner, Catherine E. (2020). Structural genomic variation leads to genetic differentiation in Lake Tanganyika's sardines. Molecular Ecology, 29(17), pp. 3277-3298. Wiley-Blackwell 10.1111/mec.15559
Meier, Joana I.; Stelkens, Rike B.; Joyce, Domino A.; Mwaiko, Salome; Phiri, Numel; Schliewen, Ulrich K.; Selz, Oliver M.; Wagner, Catherine E.; Katongo, Cyprian; Seehausen, Ole (2019). The coincidence of ecological opportunity with hybridization explains rapid adaptive radiation in Lake Mweru cichlid fishes. Nature communications, 10(1) Nature Publishing Group 10.1038/s41467-019-13278-z
Moser, Florian Nicolo; van Rijssel, Jacco C.; Mwaiko, Salome; Meier, Joana; Ngatunga, Benjamin; Seehausen, Ole (2018). The onset of ecological diversification 50 years after colonization of a crater lake by haplochromine cichlid fishes. Proceedings of the Royal Society B: Biological sciences, 285(1884), p. 20180171. The Royal Society 10.1098/rspb.2018.0171
Lemoine, Melissa; Barluenga, Marta; Lucek, Kay; Mwaiko, Salome; Häsler, Marcel; Chapman, Lauren J.; Chapman, Colin A.; Seehausen, Ole (2018). Recent sympatric speciation involving habitat-associated nuptial colour polymorphism in a crater lake cichlid. Hydrobiologia, 832(1), pp. 297-315. Springer Netherlands 10.1007/s10750-018-3746-1
Moser, Florian Nicolo; van Rijssel, Jacobus Cornelis; Ngatunga, Benjamin; Mwaiko, Salome; Seehausen, Ole (2018). The origin and future of an endangered crater lake endemic; phylogeography and ecology of Oreochromis hunteri and its invasive relatives. Hydrobiologia, 832(1), pp. 283-296. Springer Netherlands 10.1007/s10750-018-3780-z
Meier, Joana; Marques, David Alexander; Mwaiko, Salome; Wagner, Catherine; Excoffier, Laurent; Seehausen, Ole (2017). Ancient hybridization fuels rapid cichlid fish adaptive radiations. Nature communications, 8(14363), p. 14363. Nature Publishing Group 10.1038/ncomms14363
Marques, David Alexander; Lucek, Kay Jurka Olaf; Meier, Joana; Mwaiko, Salome; Wagner, Catherine; Excoffier, Laurent; Seehausen, Ole (2016). Genomics of Rapid Incipient Speciation in Sympatric Threespine Stickleback. PLoS genetics, 12(2), e1005887. Public Library of Science 10.1371/journal.pgen.1005887
Schwarzer, Julia; Shabani, Naghme; Esmaeili, Hamid Reza; Mwaiko, Salome; Seehausen, Ole (2016). Allopatric speciation in the desert: diversification of cichlids at their geographical and ecological range limit in Iran. Hydrobiologia, 791(1), pp. 193-207. Springer 10.1007/s10750-016-2976-3
Brawand, David; Wagner, Catherine; Li, Yang I.; Malinsky, Milan; Keller, Irene; Fan, Shaohua; Simakov, Oleg; Ng, Alvin Y.; Lim, Zhi Wei; Bezault, Etienne; Turner-Maier, Jason; Johnson, Jeremy; Alcazar, Rosa; Noh, Hyun Ji; Russell, Pamela; Aken, Bronwen; Alföldi, Jessica; Amemiya, Chris; Azzouzi, Naoual; Baroiller, Jean-François; ... (2014). The genomic substrate for adaptive radiation in African cichlid fish. Nature, 513(7518), pp. 375-381. Macmillan Journals Ltd. 10.1038/nature13726
