Using the PharmCAT tool for Pharmacogenetic clinical decision support.

Tippenhauer, Kevin; Philips, Marwin; Largiadèr, Carlo; Sariyar, Murat (2023). Using the PharmCAT tool for Pharmacogenetic clinical decision support. Briefings in bioinformatics, 25(1) Oxford University Press 10.1093/bib/bbad452

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Here, we will provide our insights into the usage of PharmCAT as part of a pharmacogenetic clinical decision support pipeline, which addresses the challenges in mapping clinical dosing guidelines to variants to be extracted from genetic datasets. After a general outline of pharmacogenetics, we describe some features of PharmCAT and how we integrated it into a pharmacogenetic clinical decision support system within a clinical information system. We conclude with promising developments regarding future PharmCAT releases.

Item Type:

Journal Article (Original Article)

Division/Institute:

04 Faculty of Medicine > Department of Haematology, Oncology, Infectious Diseases, Laboratory Medicine and Hospital Pharmacy (DOLS) > Institute of Clinical Chemistry

UniBE Contributor:

Largiadèr, Carlo Rodolfo

Subjects:

600 Technology > 610 Medicine & health

ISSN:

1477-4054

Publisher:

Oxford University Press

Language:

English

Submitter:

Pubmed Import

Date Deposited:

14 Dec 2023 13:47

Last Modified:

15 Dec 2023 05:59

Publisher DOI:

10.1093/bib/bbad452

PubMed ID:

38055839

Uncontrolled Keywords:

CDSS CPIC guidelines clinical information system pharmacogenetics pharmacogenomics

BORIS DOI:

10.48350/189902

URI:

https://boris.unibe.ch/id/eprint/189902

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