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Chain, Frédéric J. J.; Feulner, Philine (2014). Ecological and evolutionary implications of genomic structural variations (In Press). Frontiers in genetics, 5, p. 326. Frontiers Media SA 10.3389/fgene.2014.00326
Çetin, Cansu; Jokela, Jukka; Feulner, Philine G. D.; Schlegel, Tamara; Tardent, Nadine; Seppälä, Otto (2024). Population genetic structure in a self-compatible hermaphroditic snail is driven by drift independently of its contemporary mating system. Ecology and evolution, 14(8), e70162. John Wiley & Sons, Inc. 10.1002/ece3.70162
Lievens, Eva J P; Kühn, Samuel; Horas, Elena L; Le Pennec, Guénolé; Peter, Sarah; Petrosky, Azade D; Künzel, Sven; Feulner, Philine G D; Becks, Lutz (2024). High parasite diversity maintained after an alga-virus coevolutionary arms race. Journal of evolutionary biology, 37(7), pp. 795-806. Wiley 10.1093/jeb/voae053
Le Pennec, Guénolé; Retel, Cas; Kowallik, Vienna; Becks, Lutz; Feulner, Philine G D (2024). Demographic fluctuations and selection during host-parasite coevolution interactively increase genetic diversity. Molecular Ecology, 33(10), e16939. Wiley-Blackwell 10.1111/mec.16939
Frei, David; Mwaiko, Salome; Seehausen, Ole; Feulner, Philine G. D. (2024). Ecological disturbance reduces genomic diversity across an Alpine whitefish adaptive radiation. Evolutionary applications, 17(2) Wiley 10.1111/eva.13617
Haltiner, Linda; Spaak, Piet; Dennis, Stuart R.; Feulner, Philine G. D. (2024). Population genetic insights into establishment, adaptation, and dispersal of the invasive quagga mussel across perialpine lakes. Evolutionary applications, 17(1) Wiley 10.1111/eva.13620
Thorburn, Doko-Miles J; Sagonas, Kostas; Binzer-Panchal, Mahesh; Chain, Frederic J J; Feulner, Philine G D; Bornberg-Bauer, Erich; Reusch, Thorsten B H; Samonte-Padilla, Irene E; Milinski, Manfred; Lenz, Tobias L; Eizaguirre, Christophe (2023). Origin matters: Using a local reference genome improves measures in population genomics. Molecular ecology resources, 23(7), pp. 1706-1723. Blackwell Science 10.1111/1755-0998.13838
Frei, David; Reichlin, Pascal; Seehausen, Ole; Feulner, Philine G. D. (2023). Introgression from extinct species facilitates adaptation to its vacated niche. Molecular Ecology, 32(4), pp. 841-853. Wiley-Blackwell 10.1111/mec.16791
Frei, David; De-Kayne, Rishi; Selz, Oliver M; Seehausen, Ole; Feulner, Philine G D (2022). Genomic variation from an extinct species is retained in the extant radiation following speciation reversal. Nature ecology & evolution, 6(4), pp. 461-468. Springer Nature 10.1038/s41559-022-01665-7
Retel, Cas; Kowallik, Vienna; Becks, Lutz; Feulner, Philine G. D. (2022). Strong selection and high mutation supply characterize experimental Chlorovirus evolution. Virus evolution, 8(1), pp. 1-14. Oxford University Press 10.1093/ve/veac003
De-Kayne, Rishi; Selz, Oliver M; Marques, David A; Frei, David; Seehausen, Ole; Feulner, Philine G D (2022). Genomic architecture of adaptive radiation and hybridization in Alpine whitefish. Nature Communications, 13(1), p. 4479. Springer Nature 10.1038/s41467-022-32181-8
De-Kayne, Rishi; Frei, David; Greenway, Ryan; Mendes, Sofia L.; Retel, Cas; Feulner, Philine G. D. (2021). Sequencing platform shifts provide opportunities but pose challenges for combining genomic data sets. Molecular ecology resources, 21(3), pp. 653-660. Wiley 10.1111/1755-0998.13309
De-Kayne, Rishi; Zoller, Stefan; Feulner, Philine G. D. (2020). A de novo chromosome‐level genome assembly of Coregonus sp. “Balchen” : one representative of the Swiss Alpine whitefish radiation. Molecular ecology resources, 20(4), pp. 1093-1109. Wiley 10.1111/1755-0998.13187
Feulner, Philine; Seehausen, Ole (2019). Genomic insights into the vulnerability of sympatric whitefish species flocks. Molecular Ecology, 28(3), pp. 615-629. Wiley-Blackwell 10.1111/mec.14977
Retel, Cas; Märkle, Hanna; Becks, Lutz; Feulner, Philine (2019). Ecological and Evolutionary Processes Shaping Viral Genetic Diversity. Viruses, 11(3), E220. MDPI 10.3390/v11030220
Retel, Cas; Kowallik, Vienna; Huang, Weini; Werner, Benjamin; Künzel, Sven; Becks, Lutz; Feulner, Philine G. D. (2019). The feedback between selection and demography shapes genomic diversity during coevolution. Science Advances, 5(10), eaax0530. American Association for the Advancement of Science 10.1126/sciadv.aax0530
Frickel, Jens; Feulner, Philine; Karakoc, Emre; Becks, Lutz (2018). Population size changes and selection drive patterns of parallel evolution in a host–virus system. Nature communications, 9(1) Nature Publishing Group 10.1038/s41467-018-03990-7
Feulner, Philine; Schwarzer, Julia; Häsler, Marcel; Meier, Joana; Seehausen, Ole (2018). A Dense Linkage Map of Lake Victoria Cichlids Improved the Pundamilia Genome Assembly and Revealed a Major QTL for Sex-Determination. G3 Genes Genomes Genetics, 8(7), pp. 2411-2420. Genetics Society of America 10.1534/g3.118.200207
De-Kayne, Rishi; Feulner, Philine (2018). A European Whitefish Linkage Map and Its Implications for Understanding Genome-Wide Synteny Between Salmonids Following Whole Genome Duplication. G3 Genes Genomes Genetics, 8(12), pp. 3745-3755. Genetics Society of America 10.1534/g3.118.200552
Matthews, Blake; Best, Rebecca J.; Feulner, Philine G.D.; Narwani, Anita; Limberger, Romana; Morgan, Ted (2018). Evolution as an ecosystem process: insights from genomics. Genome, 61(4), pp. 298-309. National Research Council of Canada 10.1139/gen-2017-0044
Stapley, Jessica; Feulner, Philine; Johnston, Susan E.; Santure, Anna W.; Smadja, Carole M. (2017). Variation in recombination frequency and distribution across eukaryotes: patterns and processes. Philosophical transactions of the Royal Society. Series B - biological sciences, 372(1736) Royal Society of London 10.1098/rstb.2016.0455
Stapley, Jessica; Feulner, Philine; Johnston, Susan E.; Santure, Anna W.; Smadja, Carole M. (2017). Recombination: the good, the bad and the variable. Philosophical transactions of the Royal Society. Series B - biological sciences, 372(1736) Royal Society of London 10.1098/rstb.2017.0279
Huang, Yun; Chain, Frédéric J. J.; Panchal, Mahesh; Eizaguirre, Christophe; Kalbe, Martin; Lenz, Tobias L.; Samonte, Irene E.; Stoll, Monika; Bornberg-Bauer, Erich; Reusch, Thorsten B. H.; Milinski, Manfred; Feulner, Philine (2016). Transcriptome profiling of immune tissues reveals habitat-specific gene expression between lake and river sticklebacks. Molecular Ecology, 25(4), pp. 943-958. Wiley-Blackwell 10.1111/mec.13520
Lamanna, Francesco; Kirschbaum, Frank; Ernst, Anja R.R.; Feulner, Philine; Mamonekene, Victor; Paul, Christiane; Tiedemann, Ralph (2016). Species delimitation and phylogenetic relationships in a genus of African weakly-electric fishes (Osteoglossiformes, Mormyridae, Campylomormyrus). Molecular phylogenetics and evolution, 101, pp. 8-18. Elsevier 10.1016/j.ympev.2016.04.035
Paul, Christiane; Mamonekene, Victor; Vater, Marianne; Feulner, Philine; Engelmann, Jacob; Tiedemann, Ralph; Kirschbaum, Frank (2015). Comparative histology of the adult electric organ among four species of the genus Campylomormyrus (Teleostei: Mormyridae). Journal of Comparative Physiology A, 201(4), pp. 357-374. Springer 10.1007/s00359-015-0995-6
Feulner, Philine; Chain, Frédéric J. J.; Panchal, Mahesh; Huang, Yun; Eizaguirre, Christophe; Kalbe, Martin; Lenz, Tobias L.; Samonte, Irene E.; Stoll, Monika; Bornberg-Bauer, Erich; Reusch, Thorsten B. H.; Milinski, Manfred; Zhang, Jianzhi (2015). Genomics of Divergence along a Continuum of Parapatric Population Differentiation. PLoS genetics, 11(2), e1004966. Public Library of Science 10.1371/journal.pgen.1004966
Chain, Frédéric J. J.; Feulner, Philine; Panchal, Mahesh; Eizaguirre, Christophe; Samonte, Irene E.; Kalbe, Martin; Lenz, Tobias L.; Stoll, Monika; Bornberg-Bauer, Erich; Milinski, Manfred; Reusch, Thorsten B. H.; Zhang, Jianzhi (2014). Extensive Copy-Number Variation of Young Genes across Stickleback Populations. PLoS genetics, 10(12), e1004830. Public Library of Science 10.1371/journal.pgen.1004830
