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Keiser, Olivia; Blaser, Nello; Davies, Mary-Ann; Wessa, Patrick; Eley, Brian; Moultrie, Harry; Rabie, Helena; Technau, Karl; Ndirangu, James; Garone, Daniela; Giddy, Janet; Grimwood, Ashraf; Gsponer, Thomas; Egger, Matthias (2015). Growth in Virologically Suppressed HIV Positive Children on Antiretroviral Therapy: Individual and Population-Level References. The Pediatric infectious disease journal, 34(10), e254-9. Lippincott Williams & Wilkins 10.1097/INF.0000000000000801
Blaser, Nello; Vizcaya Salazar, Luisa; Estill, Janne; Zahnd, Cindy; Kalesan, Bindu; Egger, Matthias; Gsponer, Thomas; Keiser, Olivia (2015). gems: An R Package for Simulating from Disease Progression Models. Journal of statistical software, 64(10), pp. 1-22. UCLA Statistics
Avila, Dorita; Althoff, Keri N.; Mugglin, Catrina; Wools-Kaloustian, Kara; Koller, Manuel; Dabis, François; Nash, Denis; Gsponer, Thomas; Sungkanuparph, Somnuek; McGowan, Catherine; May, Margaret; Cooper, David; Chimbetete, Cleophas; Wolff, Marcelo; Collier, Ann; McManus, Hamish; Davies, Mary-Ann; Costagliola, Dominique; Crabtree-Ramirez, Brenda; Chaiwarith, Romanee; ... (2014). Immunodeficiency at the start of combination antiretroviral therapy in low-, middle-, and high-income countries. Journal of acquired immune deficiency syndromes JAIDS, 65(1), e8-16. Lippincott Williams & Wilkins 10.1097/QAI.0b013e3182a39979
Schomaker, M.; Gsponer, Thomas; Estill, Janne Anton Markus; Fox, M.; Boulle, A. (2014). Non-ignorable loss to follow-up: correcting mortality estimates based on additional outcome ascertainment. STATISTICS IN MEDICINE, 33(1), pp. 129-142. Wiley 10.1002/sim.5912
Wandeler, Gilles; Gerber, Florian; Rohr, Julia; Chi, Benjamin H; Orrell, Catherine; Chimbetete, Cleophas; Prozesky, Hans; Boulle, Andrew; Hoffmann, Christopher J; Gsponer, Thomas; Fox, Matthew P; Zwahlen, Marcel; Egger, Matthias; Africa, Iedea Southern (2014). Tenofovir or zidovudine in second-line antiretroviral therapy after stavudine failure in southern Africa. Antiviral therapy, 19(5), pp. 521-525. International Medical Press 10.3851/IMP2710
Pilgrim, Thomas; Rothenbühler, Martina; Kalesan, Bindu; Pulver, Cédric; Stefanini, Giulio G; Zanchin, Thomas; Räber, Lorenz; Stortecky, Stefan; Jung, Simon; Mattle, Heinrich; Moschovitis, Aris; Wenaweser, Peter Martin; Meier, Bernhard; Gsponer, Thomas; Windecker, Stephan; Jüni, Peter (2014). Additive effect of anemia and renal impairment on long-term outcome after percutaneous coronary intervention. PLoS ONE, 9(12), e114846. Public Library of Science 10.1371/journal.pone.0114846
Redmond, Shelagh; von Elm, Erik; Blümle, Anette; Gengler, Malou; Gsponer, Thomas; Egger, Matthias (2013). Cohort study of trials submitted to ethics committee identified discrepant reporting of outcomes in publications. Journal of clinical epidemiology, 66(12), pp. 1367-1375. New York, N.Y.: Elsevier 10.1016/j.jclinepi.2013.06.020
Schomaker, Michael; Egger, Matthias; Ndirangu, James; Phiri, Sam; Moultrie, Harry; Technau, Karl; Cox, Vivian; Giddy, Janet; Chimbetete, Cleophas; Wood, Robin; Gsponer, Thomas; Bolton Moore, Carolyn; Rabie, Helena; Eley, Brian; Muhe, Lulu; Penazzato, Martina; Essajee, Shaffiq; Keiser, Olivia; Davies, Mary-Ann and IeDEA-SA, Collaboration (2013). When to start antiretroviral therapy in children aged 2-5 years: a collaborative causal modelling analysis of cohort studies from southern Africa. PLoS medicine, 10(11), e1001555. Public Library of Science 10.1371/journal.pmed.1001555
Wandeler, Gilles; Gsponer, Thomas; Mulenga, Lloyd; Garone, Daniela; Wood, Robin; Maskew, Mhairi; Prozesky, Hans; Hoffmann, Christopher; Ehmer, Jochen; Dickinson, Diana; Davies, Mary-Ann; Egger, Matthias; Keiser, Olivia (2013). Zidovudine impairs immunological recovery on first-line antiretroviral therapy: collaborative analysis of cohort studies in southern Africa. AIDS, 27(14), pp. 2225-2232. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e328362d887
Fenner, Lukas; Egger, Matthias; Bodmer, Thomas; Furrer, Hansjakob; Ballif, Marie; Battegay, Manuel; Helbling, Peter; Fehr, Jan; Gsponer, Thomas; Rieder, Hans L.; Zwahlen, Marcel; Hoffmann, Matthias; Bernasconi, Enos; Cavassini, Matthias; Calmy, Alexandra; Dolina, Marisa; Frei, Reno; Janssens, Jean-Paul; Borrell, Sonia; Stucki, David; ... (2013). HIV infection disrupts the sympatric host-pathogen relationship in human tuberculosis. PLoS genetics, 9(3), e1003318. Public Library of Science 10.1371/journal.pgen.1003318
Estill, Janne; Egger, Matthias; Johnson, Leigh F.; Gsponer, Thomas; Wandeler, Gilles; Davies, Mary-Ann; Boulle, Andrew; Wood, Robin; Garone, Daniela; Stringer, Jeffrey S. A.; Hallett, Timothy B.; Keiser, Olivia (2013). Monitoring of antiretroviral therapy and mortality in HIV programmes in Malawi, South Africa and Zambia: mathematical modelling study. PLoS ONE, 8(2), e57611. Public Library of Science 10.1371/journal.pone.0057611
Wandeler, Gilles; Gsponer, Thomas; Bihl, Florian; Bernasconi, Enos; Cavassini, Matthias; Kovari, Helen; Schmid, Patrick; Battegay, Manuel; Calmy, Alexandra; Egger, Matthias; Furrer, Hansjakob; Rauch, Andri (2013). Hepatitis B virus infection is associated with impaired immunological recovery during antiretroviral therapy in the Swiss HIV cohort study. Journal of infectious diseases, 208(9), pp. 1454-1458. Cary, N.C.: Oxford University Press 10.1093/infdis/jit351
Estill, Janne; Aubriere, Cindy; Egger, Matthias; Johnson, Leigh; Wood, Robin; Garone, Daniela; Gsponer, Thomas; Wandeler, Gilles; Boulle, Andrew; Davies, Mary-Ann; Hallett, Tim; Keiser, Olivia (2012). Viral load monitoring of antiretroviral therapy, cohort viral load and HIV transmission in Southern Africa: A mathematical modelling analysis. AIDS, 26(11), pp. 1403-1413. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e3283536988
Gsponer, Thomas; Petersen, Maya; Egger, Matthias; Phiri, Sam; Maathuis, Marloes H; Boulle, Andrew; Musondad, Patrick; Tweya, Hannock; Peter, Karin; Chi, Benjamin H; Keiser, Olivia; IeDEA Southern Africa, (2012). The causal effect of switching to second-line ART in programmes without access to routine viral load monitoring. AIDS, 26(1), pp. 57-65. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e32834e1b5f
Pilgrim, Thomas; Kalesan, Bindu; Wenaweser, Peter; Huber, Christoph; Stortecky, Stefan; Buellesfeld, Lutz; Khattab, Ahmed A; Eberle, Balthasar; Gloekler, Steffen; Gsponer, Thomas; Meier, Bernhard; Jüni, Peter; Carrel, Thierry; Windecker, Stephan (2012). Predictors of Clinical Outcomes in Patients With Severe Aortic Stenosis Undergoing TAVI: A Multistate Analysis. Circulation: Cardiovascular interventions, 5(6), pp. 856-61. Philadelphia, Pa.: Lippincott Williams & Wilkins 10.1161/CIRCINTERVENTIONS.112.974899
Mugglin, Catrina; Estill, Janne; Wandeler, Gilles; Bender, Nicole; Egger, Matthias; Gsponer, Thomas; Keiser, Olivia; for IeDEA Southern Africa, (2012). Loss to programme between HIV diagnosis and initiation of antiretroviral therapy in sub-Saharan Africa: systematic review and meta-analysis. Tropical medicine and international health TM&IH, 17(12), pp. 1509-1520. Oxford: Blackwell Science 10.1111/j.1365-3156.2012.03089.x
Yiannoutsos, Constantin Theodore; Johnson, Leigh Francis; Boulle, Andrew; Musick, Beverly Sue; Gsponer, Thomas; Balestre, Eric; Law, Matthew; Shepherd, Bryan E; Egger, Matthias; International Epidemiologic Databases to Evaluate AIDS (IeDEA) C, (2012). Estimated mortality of adult HIV-infected patients starting treatment with combination antiretroviral therapy. Sexually transmitted infections, 88 Suppl 2(Suppl_2), i33-43. London: BMJ Publishing Group 10.1136/sextrans-2012-050658
Gsponer, Thomas; Weigel, Ralf; Davies, Mary-Ann; Bolton, Carolyn; Moultrie, Harry; Vaz, Paula; Rabie, Helena; Technau, Karl; Ndirangu, James; Eley, Brian; Garone, Daniela; Wellington, Maureen; Giddy, Janet; Ehmer, Jochen; Egger, Matthias; Keiser, Olivia; IeDEA Southern Africa, (2012). Variability of growth in children starting antiretroviral treatment in southern Africa. Pediatrics, 130(4), e966-77. Elk Grove Village, Ill.: American Academy of Pediatrics 10.1542/peds.2011-3020
Wandeler, Gilles; Gsponer, Thomas; Bregenzer, Andrea; Günthard, Huldrych F; Clerc, Olivier; Calmy, Alexandra; Stöckle, Marcel; Bernasconi, Enos; Furrer, Hansjakob; Rauch, Andri; Swiss HIV Cohort, Study (2012). Hepatitis C virus infections in the Swiss HIV Cohort Study: a rapidly evolving epidemic. Clinical infectious diseases, 55(10), pp. 1408-16. Cary, N.C.: Oxford University Press 10.1093/cid/cis694
Keiser, Olivia; Chi, Benjamin H; Gsponer, Thomas; Boulle, Andrew; Orrell, Catherine; Phiri, Sam; Maxwell, Nicola; Maskew, Mhairi; Prozesky, Hans; Fox, Matthew P; Westfall, Andrew; Egger, Matthias (2011). Outcomes of antiretroviral treatment in programmes with and without routine viral load monitoring in Southern Africa. AIDS, 25(14), pp. 1761-1769. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e328349822f
Banz, Vanessa; Gsponer, Thomas; Candinas, Daniel; Güller, Ulrich (2011). Population-based analysis of 4113 patients with acute cholecystitis: defining the optimal time-point for laparoscopic cholecystectomy. Annals of surgery, 254(6), pp. 964-970. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/SLA.0b013e318228d31c
Weigel, Ralf; Phiri, Sam; Chiputula, Fred; Gumulira, Joe; Brinkhof, Martin; Gsponer, Thomas; Tweya, Hannock; Egger, Matthias; Keiser, Olivia (2010). Growth response to antiretroviral treatment in HIV-infected children: a cohort study from Lilongwe, Malawi. Tropical medicine and international health TM&IH, 15(8), pp. 934-944. Oxford: Blackwell Science 10.1111/j.1365-3156.2010.02561.x
Rotger, Margalida; Gsponer, Thomas; Martinez, Raquel; Taffé, Patrick; Elzi, Luigia; Vernazza, Pietro; Cavassini, Matthias; Bernasconi, Enos; Hirschel, Bernard; Furrer, Hansjakob; Weber, Rainer; Ledergerber, Bruno; Egger, Matthias; Telenti, Amalio; Tarr, Philip E (2010). Impact of single nucleotide polymorphisms and of clinical risk factors on new-onset diabetes mellitus in HIV-infected individuals. Clinical infectious diseases, 51(9), pp. 1090-1098. Cary, N.C.: The University of Chicago Press 10.1086/656630
