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Marques, David A.; Lucek, Kay; Sousa, Vitor C.; Excoffier, Laurent; Seehausen, Ole (2021). Reply to "Re-evaluating the evidence for facilitation of stickleback speciation by admixture in the Lake Constance basin". Nature Communications, 12(1), p. 2807. Springer Nature 10.1038/s41467-021-23096-x
Sikora, Martin; Pitulko, Vladimir V.; Sousa, Vitor C.; Allentoft, Morten E.; Vinner, Lasse; Rasmussen, Simon; Margaryan, Ashot; de Barros Damgaard, Peter; de la Fuente, Constanza; Renaud, Gabriel; Yang, Melinda A.; Fu, Qiaomei; Dupanloup, Isabelle; Giampoudakis, Konstantinos; Nogués-Bravo, David; Rahbek, Carsten; Kroonen, Guus; Peyrot, Michaël; McColl, Hugh; Vasilyev, Sergey V.; ... (2019). The population history of northeastern Siberia since the Pleistocene. Nature, 570, pp. 182-188. Macmillan Journals Ltd. https://doi.org/10.1038/s41586-019-1279-z
Kuhlwilm, Martin; Han, Sojung; Sousa, Vitor C.; Excoffier, Laurent; Marques-Bonet, Tomas (2019). Ancient admixture from an extinct ape lineage into bonobos. Nature ecology & evolution, 3(6), pp. 957-965. Springer Nature 10.1038/s41559-019-0881-7
Marques, David A.; Lucek, Kay; Sousa, Vitor; Excoffier, Laurent; Seehausen, Ole (2019). Admixture between old lineages facilitated contemporary ecological speciation in Lake Constance stickleback. Nature communications, 10(1) Nature Publishing Group 10.1038/s41467-019-12182-w
Pfeifer, Susanne P.; Laurent, Stefan; Martins Conde e Sousa, Vitor; Linnen, Catherine R.; Foll, Matthieu; Excoffier, Laurent; Hoekstra, Hopi E.; Jensen, Jeffrey D. (2018). The Evolutionary History of Nebraska Deer Mice: Local Adaptation in the Face of Strong Gene Flow. Molecular Biology and Evolution, 35(4), pp. 792-806. Oxford University Press 10.1093/molbev/msy004
Sikora, Martin; Seguin-Orlando, Andaine; Martins Conde e Sousa, Vitor; Albrechtsen, Anders; Korneliussen, Thorfinn; Ko, Amy; Rasmussen, Simon; Dupanloup, Isabelle; Nigst, Philip R.; Bosch, Marjolein D.; Renaud, Gabriel; Allentoft, Morten E.; Margaryan, Ashot; Vasilyev, Sergey V.; Veselovskaya, Elizaveta V.; Borutskaya, Svetlana B.; Deviese, Thibaut; Comeskey, Dan; Higham, Tom; Manica, Andrea; ... (2017). Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers. Science, 358(6363), pp. 659-662. American Association for the Advancement of Science 10.1126/science.aao1807
de Manuel, Marc; Kuhlwilm, Martin; Frandsen, Peter; Martins Conde e Sousa, Vitor; Desai, Tariq; Prado-Martinez, Javier; Hernandez-Rodriguez, Jessica; Duperret, Isabelle; Lao, Oscar; Hallast, Pille; Schmidt, Joshua M.; Herdia-Genestar, José María; Benazzo, Andrea; Barbujani, Guido; Peter, Benjamin M.; Kuderna, Lukas F. K.; Casals, Ferran; Angedakin, Samuel; Arandjelovic, Mimi; Boesch, Christophe; ... (2016). Chimpanzee genomic diversity reveals ancient admixture with bonobos. Science, 354(6311), pp. 477-481. American Association for the Advancement of Science 10.1126/science.aag2602
Foote, Andrew David; Vijay, Nagarjun; Ávila-Arcos, María C.; Baird, Robin W.; Durban, John W.; Fumagalli, Matteo; Gibbs, Richard A.; Hanson, M. Bradley; Korneliussen, Thorfinn S.; Martin, Michael D.; Robertson, Kelly M.; Martins Conde e Sousa, Vitor; Vieira, Filipe G.; Vinar, Tomás; Wade, Paul; Worley, Kim C.; Excoffier, Laurent; Morin, Phillip A.; Gilbert, M. Thomas P. and Wolf, Jochen B.W. (2016). Genome-culture coevolution promotes rapid divergence of killer whale ecotypes. Nature communications, 7(7), p. 11693. Nature Publishing Group 10.1038/ncomms11693
Alves, Isabel; Arenas Busto, Miguel; Currat, Mathias; Sramkova Hanulova, Anna; Martins Conde e Sousa, Vitor; Ray, Nicolas; Excoffier, Laurent (2016). Long distance dispersal shaped patterns of human genetic diversity in Eurasia. Molecular Biology and Evolution, 33(4), pp. 946-958. Oxford University Press 10.1093/molbev/msv332
Meier, Joana; Martins Conde e Sousa, Vitor; Marques, David Alexander; Selz, Oliver; Wagner, Catherine; Excoffier, Laurent; Seehausen, Ole (2016). Demographic modeling with whole genome data reveals parallel origin of similar Pundamilia cichlid species after hybridization. Molecular Ecology, 26(1), pp. 123-141. Wiley-Blackwell 10.1111/mec.13838
Martins Conde e Sousa, Vitor; Peischl, Stephan; Excoffier, Laurent (2014). Impact of range expansions on current human genomic diversity. Current opinion in genetics & development, 29, pp. 22-30. Elsevier 10.1016/j.gde.2014.07.007
Excoffier, Laurent; Dupanloup, Isabelle; Huerta-Sánchez, Emilia; Sousa, Vitor C.; Foll, Matthieu (2013). Robust demographic inference from genomic and SNP data. PLoS genetics, 9(10), e1003905. Public Library of Science 10.1371/journal.pgen.1003905
