Peischl, Stephan

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2024

Gioutsos, Konstantinos; Ehrenreich, Lasse; Azenha, Luis Filipe; Quapp, Christopher Siegbert; Kocher, Gregor Jan; Lutz, Jon Andri; Peischl, Stephan; Dorn, Patrick (2024). Randomized Controlled Trial of Thresholds for Drain Removal After Anatomic Lung Resection. The annals of thoracic surgery, 117(6), pp. 1103-1109. Elsevier 10.1016/j.athoracsur.2023.09.011

Roder, Thomas; Pimentel, Grégory; Fuchsmann, Pascal; Stern, Mireille Tena; von Ah, Ueli; Vergères, Guy; Peischl, Stephan; Brynildsrud, Ola; Bruggmann, Rémy; Bär, Cornelia (2024). Scoary2: rapid association of phenotypic multi-omics data with microbial pan-genomes. Genome biology, 25(1) BioMed Central 10.1186/s13059-024-03233-7

2023

Wang, Xuejing; Peischl, Stephan; Heckel, Gerald (2023). Demographic history and genomic consequences of 10,000 generations of isolation in a wild mammal. Current biology, 33(10), 2051-2062.e4. Cell Press 10.1016/j.cub.2023.04.042

Sianta, Shelley A; Peischl, Stephan; Moeller, David A; Brandvain, Yaniv (2023). The efficacy of selection may increase or decrease with selfing depending upon the recombination environment. Evolution, 77(2), pp. 394-408. Oxford University Press 10.1093/evolut/qpac013

2022

Schlichta, Flávia; Peischl, Stephan; Excoffier, Laurent (2022). The impact of genetic surfing on neutral genomic diversity. Molecular Biology and Evolution, 39(11) Oxford University Press 10.1093/molbev/msac249

Tomasini, Matteo; Peischl, Stephan (2022). The role of spatial structure in multi-deme models of evolutionary rescue. Journal of evolutionary biology, 35(7), pp. 986-1001. Wiley 10.1111/jeb.14018

Moinet, Antoine; Schlichta, Flavia; Peischl, Stephan; Excoffier, Laurent (2022). Strong neutral sweeps occurring during a population contraction. Genetics, 220(4) Oxford University Press 10.1093/genetics/iyac021

Gilbert, Kimberly J.; Moinet, Antoine; Peischl, Stephan (2022). Gene surfing of underdominant alleles promotes formation of hybrid zones. Philosophical transactions of the Royal Society. Series B - biological sciences, 377(1846), p. 20210006. Royal Society of London 10.1098/rstb.2021.0006

2021

Moinet, Antoine; Peischl, Stephan; Excoffier, Laurent (25 August 2021). Strong neutral sweeps occurring during a population contraction (bioRxiv). Cold Spring Harbor Laboratory 10.1101/2021.08.25.457712

2020

Tomasini, Matteo; Peischl, Stephan (2020). When does gene flow facilitate evolutionary rescue? Evolution, 74(8), pp. 1640-1653. Wiley 10.1111/evo.14038

Bosshard, Lars; Peischl, Stephan; Ackermann, Martin; Excoffier, Laurent (2020). Dissection of the mutation accumulation process during bacterial range expansions. BMC Genomics, 21(1) BioMed Central 10.1186/s12864-020-6676-z

Peischl, Stephan; Gilbert, Kimberly J. (2020). Evolution of dispersal can rescue populations from expansion load. The American naturalist, 195(2), pp. 349-360. University of Chicago Press 10.1086/705993

Gilbert, Kimberly J.; Pouyet, Fanny; Excoffier, Laurent; Peischl, Stephan (2020). Transition from Background Selection to Associative Overdominance Promotes Diversity in Regions of Low Recombination. Current Biology, 30(1), pp. 101-107. Cell Press 10.1016/j.cub.2019.11.063

2019

Peischl, Stephan; Gidoin, Cindy (2019). Range Expansion Theories Could Shed Light on the Spatial Structure of Intra-tumour Heterogeneity. Bulletin of mathematical biology, 81(11), pp. 4761-4777. Springer 10.1007/s11538-018-00540-6

Bosshard, Lars; Peischl, Stephan; Ackermann, Martin; Excoffier, Laurent (2019). Mutational and Selective Processes Involved in Evolution during Bacterial Range Expansions. Molecular Biology and Evolution, 36(10), pp. 2313-2327. Oxford University Press 10.1093/molbev/msz148

2018

Gilbert, Kimberly J.; Peischl, Stephan; Excoffier, Laurent (2018). Mutation load dynamics during environmentally-driven range shifts. PLoS genetics, 14(9), pp. 1-18. Public Library of Science 10.1371/journal.pgen.1007450

Tomasini, Matteo; Peischl, Stephan (2018). Establishment of Locally Adapted Mutations Under Divergent Selection. Genetics, 209(3), pp. 885-895. Oxford University Press 10.1534/genetics.118.301104

Peischl, Stephan; Dupanloup, I.; Foucal, A.; Jomphe, M.; Bruat, V.; Grenier, J.-C.; Gouy, A.; Gilbert, K. J.; Gbeha, E.; Bosshard, L.; Hip-Ki, E.; Agbessi, M.; Hodgkinson, A.; Vézina, H.; Awadalla, P.; Excoffier, Laurent (2018). Relaxed Selection During a Recent Human Expansion. Genetics, 208(2), pp. 763-777. Genetics Society of America 10.1534/genetics.117.300551

Popadin, Konstantin; Peischl, Stephan; Garieri, Marco; Sailani, M. Reza; Letourneau, Audrey; Santoni, Federico; Lukowski, Samuel W.; Bazykin, Georgii A.; Nikolaev, Sergey; Meyer, Diogo; Excoffier, Laurent; Reymond, Alexandre; Antonarakis, Stylianos E. (2018). Slightly deleterious genomic variants and transcriptome perturbations in Down syndrome embryonic selection. Genome research, 28(1), pp. 1-10. Cold Spring Harbor, N.Y 10.1101/gr.228411.117

2017

Bosshard, Lars; Dupanloup, Isabelle; Tenaillon, Olivier; Bruggmann, Rémy; Ackermann, Martin; Peischl, Stephan; Excoffier, Laurent (2017). Accumulation of Deleterious Mutations During Bacterial Range Expansions. Genetics, 207(2), pp. 669-684. Genetics Society of America 10.1534/genetics.117.300144

Rashpa, Ravish; Vazquez Pianzola, Maria Paula; Colombo, Martino; Hernandez, Greco; Beuchle, Dirk; Berger, Fabienne Chantal; Peischl, Stephan; Bruggmann, Rémy; Suter, Beat (2017). Cbp80 is needed for the expression of piRNA components and piRNAs. PLoS ONE, 12(7), e0181743. Public Library of Science 10.1371/journal.pone.0181743

Peischl, Stephan; Excoffier, Laurent (2017). EXPANSION LOAD. In: Invasion Genetics: the Bakker and Stebbins legacy (pp. 218-231). Wiley 10.1002/9781119072799.ch13

2016

Henn, Brenna M.; Botigué, Laura R.; Peischl, Stephan; Duperret, Isabelle; Lipatov, Mikhail; Maples, Brian K.; Martin, Alicia R.; Musharoff, Shaila; Cann, Howard; Snyder, Michael P.; Excoffier, Laurent; Kidd, Jeffrey M.; Bustamante, Carlos D. (2016). Distance from Sub-Saharan Africa Predicts Mutational Load in Diverse Human Genomes. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 113(4), E440-E449. National Academy of Sciences NAS 10.1073/pnas.1510805112

Peischl, Stephan; Dupanloup, Isabelle; Bosshard, Lars; Excoffier, Laurent (2016). Genetic surfing in human populations: from genes to genomes. Current opinion in genetics & development, 41, pp. 53-61. Elsevier 10.1016/j.gde.2016.08.003

Malaspinas, Anna-Sapfo; Westaway, Michael C.; Muller, Craig; Sousa, Vitor C.; Lao, Oscar; Alves, Isabel; Bergström, Anders; Athanasiadis, Georgios; Cheng, Jade Y.; Crawford, Jacob E.; Heupink, Tim H.; Macholdt, Enrico; Peischl, Stephan; Rasmussen, Simon; Schiffels, Stephan; Subramanian, Sankar; Wright, Joanne L.; Albrechtsen, Anders; Barbieri, Chiara; Dupanloup, Isabelle; ... (2016). A genomic history of Aboriginal Australia. Nature, 538(7624), pp. 207-214. Macmillan Journals Ltd. 10.1038/nature18299

2015

Peischl, Stephan; Excoffier, Laurent (2015). Expansion load: recessive mutations and the role of standing genetic variation. Molecular Ecology, 24(9), pp. 2084-2094. Wiley-Blackwell 10.1111/mec.13154

Peischl, Stephan; Kirkpatrick, Mark; Excoffier, Laurent (2015). Expansion Load and the Evolutionary Dynamics of a Species Range. The American naturalist, 185(4), E81-E93. University of Chicago Press 10.1086/680220

Botigué, Laura R.; Henn, Brenna M.; Peischl, Stephan; Dupanloup, Isabelle; Lipatov, Mikhail; Maples, Brian K.; Martin, Alicia R.; Yee, M.C.; Cann, Howard; Snyder, Michael P.; Excoffier, Laurent; Kidd, Jeffrey M.; Bustamante, Carlos D. (2015). The Out of Africa expansion affected accumulation of deleterious alleles in human genomes. American Journal of Physical Anthropology, 156(S60), pp. 90-91. Wiley

2014

Martins Conde e Sousa, Vitor; Peischl, Stephan; Excoffier, Laurent (2014). Impact of range expansions on current human genomic diversity. Current opinion in genetics & development, 29, pp. 22-30. Elsevier 10.1016/j.gde.2014.07.007

2013

Peischl, Stephan; Duperret, Isabelle; Kirkpatrick, Mark; Excoffier, Laurent (2013). On the accumulation of deleterious mutations during range expansions. Molecular Ecology, 22(24), pp. 5972-5982. Wiley-Blackwell 10.1111/mec.12524

Peischl, Stephan; Koch, E.; Guerrero, R. F.; Kirkpatrick, Mark (2013). A sequential coalescent algorithm for chromosomal inversions. Heredity, 111(3), pp. 200-209. Oliver and Boyd 10.1038/hdy.2013.38

2012

Peischl, Stephan; Kirkpatrick, Mark (2012). Establishment of new mutations in changing environments. Genetics, 191(3), pp. 895-906. Genetics Society of America 10.1534/genetics.112.140756

Kirkpatrick, Mark; Peischl, Stephan (2012). Evolutionary rescue by beneficial mutations in environments that change in space and time. Proceedings of the Royal Society. Series B - biological sciences, 368(1610), p. 20120082. Royal Society of London 10.1098/rstb.2012.0082

2011

Schneider, Kristan A.; Peischl, Stephan (2011). Evolution of assortative mating in a population expressing dominance. PLoS ONE, 6(4), e16821. Public Library of Science 10.1371/journal.pone.0016821

2010

Peischl, Stephan; Schneider, Kristan A (2010). EVOLUTION OF DOMINANCE UNDER FREQUENCY-DEPENDENT INTRASPECIFIC COMPETITION IN AN ASSORTATIVELY MATING POPULATION. Evolution, 64(2), pp. 561-582. Wiley 10.1111/j.1558-5646.2009.00839.x

Peischl, Stephan (2010). Dominance and the maintenance of polymorphism in multiallelic migration-selection models with two demes. Theoretical population biology, 78(1), pp. 12-25. Elsevier 10.1016/j.tpb.2010.03.006

2008

Peischl, Stephan; Buerger, Reinhard (2008). Evolution of dominance under frequency-dependent intraspecific competition. Journal of theoretical biology, 251(2), pp. 210-226. Elsevier 10.1016/j.jtbi.2007.11.014

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