Scheidegger, Olivier

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Jungo, Alain; Scheidegger, Olivier; Reyes, Mauricio; Balsiger, Fabian (2021). pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis. Computer methods and programs in biomedicine, 198, p. 105796. Elsevier 10.1016/j.cmpb.2020.105796


Nguyen, Lien; Laboissonniere, Lauren A; Guo, Shu; Pilotto, Federica; Scheidegger, Olivier; Oestmann, Angelina; Hammond, Jennetta W; Li, Herman; Hyysalo, Anu; Peltola, Roosa; Pattamatta, Amrutha; Zu, Tao; Voutilainen, Merja H; Gelbard, Harris A; Saxena, Smita; Ranum, Laura P W (2020). Survival and Motor Phenotypes in FVB C9-500 ALS/FTD BAC Transgenic Mice Reproduced by Multiple Labs. Neuron, 108(4), 784-796.e3. Cell Press 10.1016/j.neuron.2020.09.009

Balsiger, Fabian; Jungo, Alain; Scheidegger, Olivier; Marty, Benjamin; Reyes, Mauricio (2020). Learning Bloch Simulations for MR Fingerprinting by Invertible Neural Networks. In: Deeba, Farah; Johnson, Patricia; Würfl, Tobias; Ye, Jong Chul (eds.) Machine Learning for Medical Image Reconstruction. Lecture Notes in Computer Science: Vol. 12450 (pp. 60-69). Cham: Springer 10.1007/978-3-030-61598-7_6

Balsiger, Fabian; Jungo, Alain; Scheidegger, Olivier; Carlier, Pierre G; Reyes, Mauricio; Marty, Benjamin (2020). Spatially regularized parametric map reconstruction for fast magnetic resonance fingerprinting. Medical image analysis, 64(101741), p. 101741. Elsevier 10.1016/

Blanquet, Marisa; Scheidegger, Olivier (2020). [Neurological Evaluation of Neuropathic Pain]. Therapeutische Umschau, 77(6), pp. 246-251. Hogrefe 10.1024/0040-5930/a001186


Caversaccio, Marco; Wimmer, Wilhelm; Anso, Juan; Mantokoudis, Georgios; Gerber, Nicolas; Rathgeb, Christoph Martin; Schneider, Daniel; Hermann, Jan; Wagner, Franca; Scheidegger, Olivier; Huth, Markus; Anschütz, Lukas Peter; Kompis, Martin; Williamson, Tom; Bell, Brett; Gerber, Kate; Weber, Stefan (2019). Robotic middle ear access for cochlear implantation: first in man. PLoS ONE, 14(8), e0220543. Public Library of Science 10.1101/19000711

Schefold, Joerg C.; Messmer, Anna S.; Wenger, Stefanie; Müller, Lionel; von Haehling, Stephan; Doehner, Wolfram; McPhee, Jamie S; Fux, Michaela; Rösler, Kai M; Scheidegger, Olivier; Olariu, Radu; Z'Graggen, Werner; Rezzi, Serge; Grathwohl, Dominik; Konz, Tobias; Takala, Jukka; Cuenoud, Bernard; Jakob, Stephan M. (2019). Nutrient pattern analysis in critically ill patients using Omics technology (NAChO) - Study protocol for a prospective observational study. Medicine, 98(1), e13937. Lippincott Williams & Wilkins 10.1097/MD.0000000000013937


Scheidegger, Olivier; Leupold, Daniela; Sauter, Rafael; Findling, Oliver; Rösler, Kai Michael; Hundsberger, Thomas (2018). 36-Months follow-up assessment after cessation and resuming of enzyme replacement therapy in late onset Pompe disease: data from the Swiss Pompe Registry. Journal of neurology, 265(12), pp. 2783-2788. Springer-Medizin-Verlag 10.1007/s00415-018-9065-7

Scheidegger, Olivier; Kamber, Nicole; Rösler, Kai Michael (2018). Estimation of voluntary elicited motor neuron discharge using a peripheral nerve collision technique at different contraction strengths. Clinical neurophysiology, 129(8), pp. 1579-1587. Elsevier 10.1016/j.clinph.2018.04.751

Anso, Juan; Scheidegger, Olivier; Wimmer, Wilhelm; Gavaghan, Kate; Gerber, Nicolas; Schneider, Daniel; Hermann, Jan; Rathgeb, Christoph Martin; Dür, Cilgia; Rösler, Kai Michael; Mantokoudis, Georgios; Caversaccio, Marco; Weber, Stefan (2018). Neuromonitoring During Robotic Cochlear Implantation: Initial Clinical Experience. Annals of biomedical engineering, 46(10), pp. 1568-1581. Springer 10.1007/s10439-018-2094-7

Balsiger, Fabian; Steindel, Carolin; Arn, Mirjam; Wagner, Benedikt; Grunder, Lorenz Nicolas; El-Koussy, Marwan; Valenzuela, Waldo Enrique; Reyes, Mauricio; Scheidegger, Olivier (2018). Segmentation of Peripheral Nerves From Magnetic Resonance Neurography: A Fully-Automatic, Deep Learning-Based Approach. Frontiers in neurology, 9(777), p. 777. Frontiers Media S.A. 10.3389/fneur.2018.00777

Balsiger, Fabian; Shridhar Konar, Amaresha; Chikop, Shivaprasad; Chandran, Vimal; Scheidegger, Olivier; Geethanath, Sairam; Reyes, Mauricio (2018). Magnetic Resonance Fingerprinting Reconstruction via Spatiotemporal Convolutional Neural Networks. In: Machine Learning for Medical Image Reconstruction. Lecture Notes in Computer Science: Vol. 11074 (pp. 39-46). Cham: Springer International Publishing 10.1007/978-3-030-00129-2_5


Weber, Stefan; Gerber, Kate; Wimmer, Wilhelm; Williamson, Tom; Gerber, Nicolas; Anso, Juan; Bell, Brett; Feldmann, Arne Niklas; Rathgeb, Christoph Martin; Matulic, Marco Benjamin; Stebinger, Manuel; Schneider, Daniel; Mantokoudis, Georgios; Scheidegger, Olivier; Wagner, Franca; Kompis, Martin; Caversaccio, Marco (2017). Instrument flight to the inner ear. Science robotics, 2(4), pp. 1-12. American Association for the Advancement of Science 10.1126/scirobotics.aal4916

Caversaccio, Marco; Gerber, Kate; Wimmer, Wilhelm; Williamson, Tom; Anso, Juan; Mantokoudis, Georgios; Gerber, Nicolas; Rathgeb, Christoph Martin; Feldmann, Arne Niklas; Wagner, Franca; Scheidegger, Olivier; Kompis, Martin; Weisstanner, Christian; Zoka Assadi, Masoud; Rösler, Kai Michael; Bitterli, Lukas Peter; Huth, Markus; Weber, Stefan (2017). Robotic cochlear implantation: surgical procedure and first clinical experience. Acta oto-laryngologica, 137(4), pp. 447-454. Informa Healthcare 10.1080/00016489.2017.1278573


Gavaghan, Kate; Dür, Cilgia; Scheidegger, Olivier; Rathgeb, Christoph; Weder, Stefan; Bitterli, Lukas; Wagner, Franca; Weber, Stefan; Caversaccio, Marco; Gerber, Nicolas (May 2016). Ex-vivo Evaluation of a Chorda Tympani Prediction Model for Minimally Invasive Cochlear Implantation (Unpublished). In: 14th International Conference On Cochlear Implants And Other Implantable Technologies.

Scheidegger, Olivier; Kihm, Christina; Kamm, Christian Philipp; Rösler, Kai Michael (2016). Sural nerve conduction studies using ultrasound-guided needle positioning: Influence of age and recording location. Muscle & nerve, 54(5), pp. 879-882. John Wiley & Sons 10.1002/mus.25133

Carlier, Pierre G.; Marty, Benjamin; Scheidegger, Olivier; Loureiro de Sousa, Paulo; Baudin, Pierre-Yves; Snezhko, Eduard; Vlodavets, Dmitry (2016). Skeletal Muscle Quantitative Nuclear Magnetic Resonance Imaging and Spectroscopy as an Outcome Measure for Clinical Trials. Journal of neuromuscular diseases, 3(1), pp. 1-28. IOS Press 10.3233/JND-160145

Rathgeb, Christoph; Gerber, Kate; Dür, Cilgia; Scheidegger, Olivier; Williamson, Tom; Anschütz, Lukas; Caversaccio, Marco; Weber, Stefan; Gerber, Nicolas (2016). Ex-vivo evaluation of a chorda tympani prediction model for minimally invasive cochlear implantation. International Journal of Computer Assisted Radiology and Surgery, 11(S1), pp. 76-77. Heidelberg: Springer

Gavaghan, Kate; Rathgeb, Christoph; Dür, Cilgia; Scheidegger, Olivier; Williamson, Tom; Anschütz, Lukas; Caversaccio, Marco; Weber, Stefan; Gerber, Nicolas (2016). Modelling of the Chorda Tympani for Minimally Invasive Cochlear Implantation. In: CURAC 2016 : 15. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie. 29.09.-01.10.2016.


Rösler, Kai Michael; Scheidegger, Olivier (2015). Myositides : What is the current situation? Zeitschrift für Rheumatologie, 74(6), pp. 496-506. Springer-Medizin-Verlag 10.1007/s00393-014-1547-0


Scheidegger, Olivier; Wingeier, Kevin; Stefan, Dan; Graveron-Demilly, Danielle; van Ormondt, Dirk; Wiest, Roland; Slotboom, Johannes (2013). Optimized quantitative magnetic resonance spectroscopy for clinical routine. Magnetic resonance in medicine, 70(1), pp. 25-32. New York, N.Y.: Wiley-Liss 10.1002/mrm.24455

Scheidegger, Olivier; Wiest, Roland; Jann, Kay; König, Thomas; Meyer, Klaus; Hauf, Martinus (2013). Epileptogenic developmental venous anomaly: insights from simultaneous EEG/fMRI. Clinical EEG and neuroscience, 44(2), pp. 157-160. London: Sage 10.1177/1550059412464463

Wiest, Roland; Estermann, Lea; Scheidegger, Olivier; Rummel, Christian; Jann, Kay; Seeck, Margitta; Schindler, Kaspar; Hauf, Martinus (2013). Widespread grey matter changes and hemodynamic correlates to interictal epileptiform discharges in pharmacoresistant mesial temporal epilepsy. Journal of neurology, 260(6), pp. 1601-1610. Heidelberg: Springer-Verlag 10.1007/s00415-013-6841-2


Scheidegger, O; Kamm, Cp; Humpert, Sj; Rösler, Km (2012). Corticospinal output during muscular fatigue differs in multiple sclerosis patients compared to healthy controls. Multiple sclerosis journal, 18(10), pp. 1500-6. London: Sage 10.1177/1352458512438722

Hauf, M; Jann, K; Schindler, K; Scheidegger, O; Meyer, K; Rummel, C; Mariani, L; Koenig, T; Wiest, R (2012). Localizing Seizure-Onset Zones in Presurgical Evaluation of Drug-Resistant Epilepsy by Electroencephalography/fMRI: Effectiveness of Alternative Thresholding Strategies. American journal of neuroradiology AJNR, 33(9), pp. 1818-24. Oak Brook, Ill.: American Society of Neuroradiology 10.3174/ajnr.A3052


Z'graggen, W J; Brander, L; Tuchscherer, D; Scheidegger, O; Takala, J; Bostock, H (2011). Muscle membrane dysfunction in critical illness myopathy assessed by velocity recovery cycles. Clinical neurophysiology, 122(4), pp. 834-41. Amsterdam: Elsevier 10.1016/j.clinph.2010.09.024

Rummel, Christian; Abela, Eugenio; Müller, Markus; Hauf, Martinus; Scheidegger, Olivier; Wiest, Roland; Schindler, Kaspar (2011). Uniform approach to linear and nonlinear interrelation patterns in multivariate time series. Physical review. E - statistical, nonlinear, and soft matter physics, 83(6 Pt 2), p. 66215. Melville, N.Y.: American Physical Society 10.1103/PhysRevE.83.066215

Scheidegger, Olivier; Küffer, Alexander F; Kamm, Christian P; Rösler, Kai M (2011). Reproducibility of sensory nerve conduction studies of the sural nerve using ultrasound-guided needle positioning. Muscle & nerve, 44(6), pp. 873-6. New York, N.Y.: John Wiley & Sons


Kamm, Christian P; Scheidegger, Olivier; Rösler, Kai M (2009). Ultrasound-guided needle positioning in sensory nerve conduction study of the sural nerve. Clinical neurophysiology, 120(7), pp. 1342-5. Amsterdam: Elsevier 10.1016/j.clinph.2009.04.016

Rösler, Kai M; Scheidegger, O; Magistris, M R (2009). Corticospinal output and loss of force during motor fatigue. Experimental brain research, 197(2), pp. 111-23. Berlin: Springer-Verlag 10.1007/s00221-009-1897-z

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