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Pfefferli, Catherine; Bonvin, Marylène; Grepper, Dogan; Robatel, Steve; König, Désirée; Lischer, Heidi E L; Bruggmann, Rémy; Jaźwińska, Anna (2023). Parallels between oncogene-driven cardiac hyperplasia and heart regeneration in zebrafish. Development, 150(12) The Company of Biologists 10.1242/dev.201412
Duruz, Jules; Sprecher, Marta; Kaldun, Jenifer C; Al-Soudy, Al-Sayed; Tschanz, Heidi E L; van Geest, Geert; Nicholson, Pamela; Bruggmann, Rémy; Sprecher, Simon G (2023). Molecular characterization of cell types in the squid Loligo vulgaris. eLife, 12 eLife Sciences Publications 10.7554/eLife.80670
Bise, Thomas; Pfefferli, Catherine; Bonvin, Marylène; Taylor, Lea; Lischer, Heidi E L; Bruggmann, Rémy; Jaźwińska, Anna (2023). The regeneration-responsive element careg monitors activation of Müller glia after MNU-induced damage of photoreceptors in the zebrafish retina. Frontiers in molecular neuroscience, 16, p. 1160707. Frontiers Research Foundation 10.3389/fnmol.2023.1160707
Giesen, Athene; Blanckenhorn, Wolf U; Schäfer, Martin A; Shimizu, Kentaro K; Shimizu-Inatsugi, Rie; Misof, Bernhard; Podsiadlowski, Lars; Niehuis, Oliver; Lischer, Heidi E L; Aeschbacher, Simon; Kapun, Martin (2023). Geographic Variation in Genomic Signals of Admixture Between Two Closely Related European Sepsid Fly Species. Evolutionary biology, 50(4), pp. 395-412. Springer 10.1007/s11692-023-09612-5
Talker, Stephanie C; Barut, G Tuba; Lischer, Heidi E L; Rufener, Reto; von Münchow, Lilly; Bruggmann, Rémy; Summerfield, Artur (2022). Monocyte biology conserved across species: Functional insights from cattle. Frontiers in immunology, 13, p. 889175. Frontiers Research Foundation 10.3389/fimmu.2022.889175
Borcard, Loïc Vivien; Kick, Andrew Robert; Hug, Corinne; Lischer, Heidi Erika Lisa; Käser, Tobias; Summerfield, Artur (2021). Systems Immunology Analyses Following Porcine Respiratory and Reproductive Syndrome Virus Infection and Vaccination. Frontiers in immunology, 12, p. 779747. Frontiers Research Foundation 10.3389/fimmu.2021.779747
Brkic, Sime; Stivala, Simona; Santopolo, Alice; Szybinski, Jakub; Jungius, Sarah; Passweg, Jakob R; Tsakiris, Dimitrios; Dirnhofer, Stefan; Hutter, Gregor; Leonards, Katharina; Lischer, Heidi E L; Dettmer, Matthias S; Neel, Benjamin G; Levine, Ross L; Meyer, Sara C (2021). Dual targeting of JAK2 and ERK interferes with the myeloproliferative neoplasm clone and enhances therapeutic efficacy. Leukemia, 35(10), pp. 2875-2884. Springer Nature 10.1038/s41375-021-01391-2
Kuhn-Nentwig, Lucia; Lischer, Heidi E. L.; Pekár, Stano; Langenegger, Nicolas; Albo, Maria J.; Isaia, Marco; Nentwig, Wolfgang (2021). Linear Peptides-A Combinatorial Innovation in the Venom of Some Modern Spiders. Frontiers in Molecular Biosciences, 8, p. 705141. Frontiers 10.3389/fmolb.2021.705141
Zheng, Jia; Bratulic, Sinisa; Lischer, Heidi E. L.; Wagner, Andreas (2021). Mistranslation can promote the exploration of alternative evolutionary trajectories in enzyme evolution. Journal of evolutionary biology, 34(8), pp. 1302-1315. Wiley 10.1111/jeb.13892
Leigh, Deborah M; Lischer, Heidi E L; Guillaume, Frédéric; Grossen, Christine; Günther, Torsten (2021). Disentangling adaptation from drift in bottlenecked and reintroduced populations of Alpine ibex. Molecular ecology resources, 21(7), pp. 2350-2363. Wiley 10.1111/1755-0998.13442
Yilmaz, Bahtiyar; Mooser, Catherine; Keller, Irene; Li, Hai; Zimmermann, Jakob; Bosshard, Lars; Fuhrer, Tobias; Gomez de Agüero, Mercedes; Fernandez Trigo, Nerea; Tschanz-Lischer, Heidi; Limenitakis, Julien P.; Hardt, Wolf-Dietrich; McCoy, Kathleen; Stecher, Bärbel; Excoffier, Laurent; Sauer, Uwe; Ganal-Vonarburg, Stephanie C.; Macpherson, Andrew J. (2021). Long-term evolution and short-term adaptation of microbiota strains and sub-strains in mice. Cell host & microbe, 29(4), 650-663.e9. Cell Press 10.1016/j.chom.2021.02.001
Akiyama, Reiko; Janqiang, Sun; Hatakeyam, Masaomi; Lischer, Heidi E. L.; Briskine, Roman V.; Hay, Angela; Gan, Xiangchao; Tsiantis, Miltos; Kudoh, Hiroshi; Kanaoka, Masahiro M.; Sese, Jun; Shimizu, Kentaro K.; Shimizu-Inatsugi, Rie (2021). Fine-scale empirical data on niche divergence and homeolog expression patterns in an allopolyploid and its diploid progenitor species. New Phytologist, 229(6), pp. 3587-3601. Wiley-Blackwell 10.1111/nph.17101
Schmidli, Manuel Roland; Sadowska, Aleksandra; Cvitas, Iva; Gantenbein, Benjamin; Lischer, Heidi E. L.; Forterre, Simone; Hitzl, Wolfgang; Forterre, Franck; Wuertz-Kozak, Karin (2020). Fibronectin Fragments and Inflammation during Canine Intervertebral Disc Disease. Frontiers in veterinary science, 7 Frontiers Media 10.3389/fvets.2020.547644
Simon, R; Lischer, H. E. L.; Pieńkowska-Schelling, A.; Keller, I.; Häfliger, I. M.; Letko, A.; Schelling, C; Lühken, G; Drögemüller, C. (2020). New genomic features of the polled intersex syndrome variant in goats unraveled by long-read whole-genome sequencing. Animal genetics, 51(3), pp. 439-448. Wiley 10.1111/age.12918
Barut, G. Tuba; Lischer, Heidi E. L.; Bruggmann, Rémy; Summerfield, Artur; Talker, Stephanie C. (2020). Transcriptomic profiling of bovine blood dendritic cells and monocytes following TLR stimulation. European journal of immunology, 50(11), pp. 1691-1711. Wiley-VCH 10.1002/eji.202048643
Lischer, Heidi; Excoffier, Laurent; Heckel, Gerald (2014). Ignoring heterozygous sites biases phylogenomic estimates of divergence times: implications for the evolutionary history of Microtus voles. Molecular Biology and Evolution, 31(4), pp. 817-831. Oxford University Press 10.1093/molbev/mst271
Lischer, Heidi (2013). Genomic inference of evolutionary history and gene expression divergence in rodents. (Dissertation, University of Bern)
Lischer, H.E.L.; Excoffier, L. (2012). PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs. Bioinformatics, 28(2), pp. 298-299. Oxford: Oxford University Press 10.1093/bioinformatics/btr642
