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Miettinen, Arttu; Vogiatzis Oikonomidis, Ioannis; Bonnin, Anne; Stampanoni, Marco (2019). NRStitcher: Non-rigid stitching of terapixel-scale volumetric images. Bioinformatics, 35(24), pp. 5290-5297. Oxford University Press 10.1093/bioinformatics/btz423
Vogiatzis Oikonomidis, Ioannis; Lovric, Goran; Cremona, Tiziana Patrizia; Arcadu, Filippo; Patera, Alessandra; Schittny, Johannes; Stampanoni, Marco (2017). Imaging samples larger than the field of view: the SLS experience. Journal of Physics: Conference Series, 849, 012004. Institute of Physics Publishing IOP 10.1088/1742-6596/849/1/012004
Vogiatzis Oikonomidis, Ioannis; Cremona, Tiziana Patrizia; Lovric, Goran; Arcadu, Filippo; Stampanoni, Marco; Schittny, Johannes (2017). Effective segmentation of fresh post-mortem murine lung parenchyma in phase contrast X-ray tomographic microscopy images. Journal of Physics: Conference Series, 849(1), 012006. Institute of Physics Publishing IOP 10.1088/1742-6596/849/1/012006
Lovric, Goran; Vogiatzis Oikonomidis, Ioannis; Mokso, Rajmund; Stampanoni, Marco; Roth-Kleiner, Matthias; Schittny, Johannes (2017). Automated computer-assisted quantitative analysis of intact murine lungs at the alveolar scale. PLoS ONE, 12(9), e0183979. Public Library of Science 10.1371/journal.pone.0183979
Lovric, Goran; Mokso, Rajmund; Arcadu, Filippo; Vogiatzis Oikonomidis, Ioannis; Schittny, Johannes; Roth-Kleiner, Matthias; Stampanoni, Marco (2017). Tomographic in vivo microscopy for the study of lung physiology at the alveolar level. Scientific Reports, 7(1), p. 12545. Nature Publishing Group 10.1038/s41598-017-12886-3
