Althaus, Christian L.

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Journal Article

Viana, Raquel; Moyo, Sikhulile; Amoako, Daniel G; Tegally, Houriiyah; Scheepers, Cathrine; Althaus, Christian L.; Anyaneji, Ugochukwu J; Bester, Phillip A; Boni, Maciej F; Chand, Mohammed; Choga, Wonderful T; Colquhoun, Rachel; Davids, Michaela; Deforche, Koen; Doolabh, Deelan; du Plessis, Louis; Engelbrecht, Susan; Everatt, Josie; Giandhari, Jennifer; Giovanetti, Marta; ... (2022). Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa. Nature, 603(7902), pp. 679-686. Macmillan Journals Ltd. 10.1038/s41586-022-04411-y

Kostoulas, Polychronis; Meletis, Eletherios; Pateras, Konstantinos; Eusebi, Paolo; Kostoulas, Theodoros; Furuya-Kanamori, Luis; Speybroeck, Niko; Denwood, Matthew; Doi, Suhail A R; Althaus, Christian L.; Kirkeby, Carsten; Rohani, Pejman; Dhand, Navneet K; Peñalvo, José L; Thabane, Lehana; BenMiled, Slimane; Sharifi, Hamid; Walter, Stephen D (2021). The epidemic volatility index, a novel early warning tool for identifying new waves in an epidemic. Scientific Reports, 11(1), p. 23775. Nature Publishing Group 10.1038/s41598-021-02622-3

Chen, Chaoran; Nadeau, Sarah Ann; Topolsky, Ivan; Manceau, Marc; Huisman, Jana S; Jablonski, Kim Philipp; Fuhrmann, Lara; Dreifuss, David; Jahn, Katharina; Beckmann, Christiane; Redondo, Maurice; Noppen, Christoph; Risch, Lorenz; Risch, Martin; Wohlwend, Nadia; Kas, Sinem; Bodmer, Thomas; Roloff, Tim; Stange, Madlen; Egli, Adrian; ... (2021). Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland. Epidemics, 37, p. 100480. Elsevier 10.1016/j.epidem.2021.100480

Riou, Julien; Dupont, Carole; Bertagnolio, Silvia; Gupta, Ravindra K; Kouyos, Roger D; Egger, Matthias; Althaus, Christian L. (2021). Drivers of HIV-1 drug resistance to non-nucleoside reverse-transcriptase inhibitors (NNRTIs) in nine southern African countries: a modelling study. BMC infectious diseases, 21(1), p. 1042. BioMed Central 10.1186/s12879-021-06757-6

Kremer, Cécile; Torneri, Andrea; Boesmans, Sien; Meuwissen, Hanne; Verdonschot, Selina; Vanden Driessche, Koen; Althaus, Christian L.; Faes, Christel; Hens, Niel (2021). Quantifying superspreading for COVID-19 using Poisson mixture distributions. Scientific reports, 11(1), p. 14107. Springer Nature 10.1038/s41598-021-93578-x

Menges, Dominik; Aschmann, Hélène E; Moser, André; Althaus, Christian L.; von Wyl, Viktor (2021). A Data-Driven Simulation of the Exposure Notification Cascade for Digital Contact Tracing of SARS-CoV-2 in Zurich, Switzerland. JAMA Network Open, 4(4), e218184. American Medical Association 10.1001/jamanetworkopen.2021.8184

Hauser, Anthony; Counotte, Michel J.; Margossian, Charles C; Konstantinoudis, Garyfallos; Low, Nicola; Althaus, Christian L.; Riou, Julien (2020). Estimation of SARS-CoV-2 mortality during the early stages of an epidemic: A modeling study in Hubei, China, and six regions in Europe. PLoS medicine, 17(7), e1003189. Public Library of Science 10.1371/journal.pmed.1003189

Ashcroft, Peter; Huisman, Jana S; Lehtinen, Sonja; Bouman, Judith A; Althaus, Christian L.; Regoes, Roland R; Bonhoeffer, Sebastian (2020). COVID-19 infectivity profile correction [viewpoint]. Swiss medical weekly, 150, w20336. EMH Schweizerischer Ärzteverlag 10.4414/smw.2020.20336

Chowdhury, Rajiv; Heng, Kevin; Shawon, Md Shajedur Rahman; Goh, Gabriel; Okonofua, Daisy; Ochoa-Rosales, Carolina; Gonzalez-Jaramillo, Valentina; Bhuiya, Abbas; Reidpath, Daniel; Prathapan, Shamini; Shahzad, Sara; Althaus, Christian L.; Gonzalez-Jaramillo, Nathalia; Franco, Oscar H. (2020). Dynamic interventions to control COVID-19 pandemic: a multivariate prediction modelling study comparing 16 worldwide countries. European journal of epidemiology, 35(5), pp. 389-399. Springer 10.1007/s10654-020-00649-w

Cadosch, Dominique; Garcia, Victor; Jensen, Jørgen S; Low, Nicola; Althaus, Christian L. (2020). Understanding the spread of de novo and transmitted macrolide-resistance in Mycoplasma genitalium. PeerJ, 8, e8913. PeerJ, Ltd 10.7717/peerj.8913

Brugger, Jon; Althaus, Christian L. (2020). Transmission of and susceptibility to seasonal influenza in Switzerland from 2003 to 2015. Epidemics, 30, p. 100373. Elsevier 10.1016/j.epidem.2019.100373

Fingerhuth, Stephanie M.; Low, Nicola; Bonhoeffer, Sebastian; Althaus, Christian L. (2017). Detection of antibiotic resistance is essential for gonorrhoea point-of-care testing: a mathematical modelling study. BMC medicine, 15(1), p. 142. BioMed Central 10.1186/s12916-017-0881-x

Förster, Sunniva; Unemo, Magnus; Hathaway, Lucy J.; Low, Nicola; Althaus, Christian L. (2016). Time-kill curve analysis and pharmacodynamic modelling for in vitro evaluation of antimicrobials against Neisseria gonorrhoeae. BMC microbiology, 16, p. 216. BioMed Central 10.1186/s12866-016-0838-9

Althaus, Christian L.; Joos, Beda; Perelson, Alan S.; Günthard, Huldrych F. (2014). Quantifying the turnover of transcriptional subclasses of HIV-1-infected cells. PLoS computational biology, 10(10), e1003871. Public Library of Science 10.1371/journal.pcbi.1003871

Althaus, Christian L.; Turner, Katherine ME; Mercer, Catherine H.; Auguste, Peter; Roberts, Tracy E.; Bell, Gill; Herzog, Sereina A.; Cassell, Jackie A.; Edmunds, W. John; White, Peter J.; Ward, Helen; Low, Nicola (2014). Effectiveness and cost-effectiveness of traditional and new partner notification technologies for curable sexually transmitted infections: observational study, systematic reviews and mathematical modelling. Health technology assessment, 18(2), pp. 1-100. National Coordinating Centre for Health Technology Assessment 10.3310/hta18020

Herzog, Sereina A.; Heijne, Janneke C. M.; Scott, Pippa; Althaus, Christian L.; Low, Nicola (2013). Direct and indirect effects of screening for Chlamydia trachomatis on the prevention of pelvic inflammatory disease: a mathematical modeling study. EPIDEMIOLOGY, 24(6), pp. 854-862. Lippincott Williams & Wilkins 10.1097/EDE.0b013e31829e110e

Heijne, Janneke C. M.; Herzog, Sereina A.; Althaus, Christian L.; Low, Nicola; Kretzschmar, Mirjam (2013). Case and partnership reproduction numbers for a curable sexually transmitted infection. JOURNAL OF THEORETICAL BIOLOGY, 331, pp. 38-47. Elsevier 10.1016/j.jtbi.2013.04.010

Althaus, Christian L.; Heijne, Janneke C. M.; Low, Nicola (2012). Towards More Robust Estimates of the Transmissibility of Chlamydia trachomatis. Sexually transmitted diseases, 39(5), pp. 402-404. Philadelphia, Pa.: Lippincott Williams & Wilkins 10.1097/OLQ.0b013e318248a550

Althaus, Christian L.; Heijne, Janneke C. M.; Herzog, Sereina A; Roellin, Adrian; Low, Nicola (2012). Individual and population level effects of partner notification for Chlamydia trachomatis. PLoS ONE, 7(12), e51438. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0051438

Althaus, Christian L.; De Boer, Rob J.; Dieli, Francesco (2011). Implications of CTL-Mediated Killing of HIV-Infected Cells during the Non-Productive Stage of Infection. PLoS ONE, 6(2), e16468. Public Library of Science 10.1371/journal.pone.0016468

Althaus, Christian L.; Heijne, Janneke C.M.; Röllin, Adrian; Low, Nicola (2010). Transmission dynamics of Chlamydia trachomatis affect the impact of screening programmes. Epidemics, 2(3), pp. 123-131. Amsterdam: Elsevier 10.1016/j.epidem.2010.04.002

Althaus, Christian L.; De Boer, Rob J.; Pascual, Mercedes (2008). Dynamics of Immune Escape during HIV/SIV Infection. PLoS computational biology, 4(7), e1000103. Public Library of Science 10.1371/journal.pcbi.1000103

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