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Ennis, Sarah; Conforte, Alessandra; O'Reilly, Eimear; Takanlu, Javid Sabour; Cichocka, Tatiana; Dhami, Sukhraj Pal; Nicholson, Pamela; Krebs, Philippe; Ó Broin, Pilib; Szegezdi, Eva (2023). Cell-cell interactome of the hematopoietic niche and its changes in acute myeloid leukemia. iScience, 26(6), p. 106943. Elsevier 10.1016/j.isci.2023.106943
Duruz, Jules; Sprecher, Marta; Kaldun, Jenifer C; Al-Soudy, Al-Sayed; Tschanz, Heidi E L; van Geest, Geert; Nicholson, Pamela; Bruggmann, Rémy; Sprecher, Simon G (2023). Molecular characterization of cell types in the squid Loligo vulgaris. eLife, 12 eLife Sciences Publications 10.7554/eLife.80670
Schumacher, Melanie; Nicholson, Pamela; Stoffel, Michael H; Chandran, Suchismita; D'Mello, Adonis; Ma, Li; Vashee, Sanjay; Jores, Joerg; Labroussaa, Fabien (2023). Corrigendum: Evidence for the cytoplasmic localization of the L-α-Glycerophosphate oxidase in members of the "Mycoplasma mycoides cluster". Frontiers in Microbiology, 14(1293129), p. 1293129. Frontiers 10.3389/fmicb.2023.1293129
Spinelli, Marialuigia; Zdanowicz, Jarmila A; Keller, Irene; Nicholson, Pamela; Raio, Luigi; Amylidi-Mohr, Sofia; Mosimann, Beatrice; Surbek, Daniel; Mueller, Martin (2022). Hypertensive disorders of pregnancy share common cfDNA methylation profiles. Scientific Reports, 12(1), p. 19837. Nature Publishing Group 10.1038/s41598-022-24348-6
Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501
Sage, Sophie E.; Nicholson, Pamela; Peters, Laureen M.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2022). Single-cell gene expression analysis of cryopreserved equine bronchoalveolar cells (In Press). Frontiers in immunology, 13 Frontiers Research Foundation 10.3389/fimmu.2022.929922
Sage, Sophie Elena; Nicholson, Pamela; Leeb, Tosso; Gerber, Vinzenz; Jagannathan, Vidhya (2022). Long-Read Transcriptome of Equine Bronchoalveolar Cells. Genes, 13(10), p. 1722. MDPI 10.3390/genes13101722
Labroussaa, Fabien; Thomann, Andreas; Nicholson, Pamela; Falquet, Laurent; Jores, Jörg (2020). Complete Genome Sequence of Mycoplasma feriruminatoris Strain IVB14/OD_0535, Isolated from an Alpine Ibex in a Swiss Zoo. Microbiology resource announcements, 9(12) American Society for Microbiology 10.1128/MRA.01528-19
Schumacher, Melanie Edith; Nicholson, Pamela; Stoffel, Michael H.; Chandran, Suchismita; D'Mello, Adonis; Ma, Li; Vashee, Sanjay; Jores, Jörg; Labroussaa, Fabien (2019). Evidence for the Cytoplasmic Localization of the L-α-Glycerophosphate Oxidase in Members of the "Mycoplasma mycoides Cluster". Frontiers in Microbiology, 10(1344), p. 1344. Frontiers 10.3389/fmicb.2019.01344
Nicholson, Pamela; Furrer, Julia; Hässig, Michael; Strauss, Christian; Heller, Manfred; Braga, Sophie; Frey, Joachim (2019). Production of neutralizing antibodies against the secreted Clostridium chauvoei toxin A (CctA) upon blackleg vaccination. Anaerobe, 56, pp. 78-87. Elsevier 10.1016/j.anaerobe.2019.02.011
Nicholson, Pamela; Gkratsou, Asimina; Josi, Christoph; Colombo, Martino; Mühlemann, Oliver (2018). Dissecting the functions of SMG5, SMG7 and PNRC2 in nonsense-mediated mRNA decay of human cells. RNA - a publication of the RNA Society, 24(4), pp. 557-573. Cold Spring Harbor Laboratory Press 10.1261/rna.063719.117
Zeeh, Friederike; De Luca, Silvio; Nicholson, Pamela; Grützner, Niels; Nathues, Christina; Perreten, Vincent; Nathues, Heiko (2018). Brachyspira hyodysenteriae detection in the large intestine of slaughtered pigs. Journal of veterinary diagnostic investigation, 30(1), pp. 56-63. American Association of Veterinary Laboratory Diagnosticians AAVLD 10.1177/1040638717722816
De Luca, Silvio; Nicholson, Pamela; Magistrali, Chiara F.; García-Martín, Ana B.; Rychener, Lorenz; Zeeh, Friederike; Frey, Joachim; Perreten, Vincent (2018). Transposon-associated lincosamide resistance lnu (C) gene identified in Brachyspira hyodysenteriae ST83. Veterinary microbiology, 214, pp. 51-55. Elsevier 10.1016/j.vetmic.2017.12.003
Aguilar-Bultet, Lisandra; Nicholson, Pamela; Rychener, Lorenz; Dreyer, Margaux; Gözel, Bulent; Origgi, Francesco C; Oevermann, Anna; Frey, Joachim; Falquet, Laurent (2018). Genetic Separation of Listeria monocytogenes Causing Central Nervous System Infections in Animals. Frontiers in cellular and infection microbiology, 8(20), p. 20. Frontiers 10.3389/fcimb.2018.00020
Nicholson, Pamela; Fathi, M A; Fischer, A; Mohan, C; Schieck, E; Mishra, N; Heinimann, Andreas; Frey, Joachim; Wieland, B; Jores, Jörg (2017). Detection of Tilapia Lake Virus in Egyptian fish farms experiencing high mortalities in 2015. Journal of fish diseases, 40(12), pp. 1925-1928. Wiley 10.1111/jfd.12650
Nicholson, Pamela; Josi, Christoph; Kurosawa, Hitomi; Yamashita, Akio; Mühlemann, Oliver (2014). A novel phosphorylation-independent interaction between SMG6 and UPF1 is essential for human NMD. Nucleic acids research, 42(14), pp. 9217-9235. Oxford University Press 10.1093/nar/gku645
de Turris, Valeria; Nicholson, Pamela; Zamudio Orozco, Rodolfo; Singer, Robert H.; Mühlemann, Oliver (2011). Cotranscriptional effect of a premature termination codon revealed by live-cell imaging. RNA - a publication of the RNA Society, 17(12), pp. 2094-2107. Woodbury, N.Y.: Cold Spring Harbor Laboratory Press 10.1261/rna.02918111
Nicholson, Pamela; Mühlemann, Oliver (2010). Cutting the nonsense: the degradation of PTC containing mRNAs. Biochemical Society transactions, 38(6), pp. 1615-1620. London: Portland Press 10.1042/BST0381615
Nicholson, Pamela; Yepiskoposyan, Hasmik; Metze, Stefanie; Zamudio Orozco, Rodolfo; Kleinschmidt, Nicole; Mühlemann, Oliver (2010). Nonsense-mediated mRNA decay in human cells: mechanistic insights, functions beyond quality control and the double-life of NMD factors. Cellular and molecular life sciences, 67(5), pp. 677-700. Basel: SP Birkhäuser Verlag Basel 10.1007/s00018-009-0177-1
Nicholson, Pamela; Joncourt, Raphael; Mühlemann, Oliver (2012). Analysis of Nonsense-Mediated mRNA Decay in Mammalian Cells. In: Current Protocols in Cell Biology 55 (27.4.1.-27.4.61). Chichester: John Wiley & Sons 10.1002/0471143030.cb2704s55
Gkratsou, Asimina; Nicholson, Pamela; Colombo, Martino; Mühlemann, Oliver (7 October 2016). Investigation of the role of PNRC2 in nonsense-mediated mRNA decay in human cells (Unpublished). In: EMBO | EMBL Symposium: The Complex Life of mRNA. EMBL Heidelberg, Germany. 05.-08.10.16.
Nicholson, Pamela (24 January 2014). SMG6 mediated degradation of nonsense mRNA requires phosphorylation-independent interaction with the helicase domain of UPF1 (Unpublished). In: Swiss RNA Workshop 2014. Bern, Schweiz. 24.01.2014.
Nicholson, Pamela (22 May 2013). Elucidating the roles of SMG5, SMG7 and PNRC2 in NMD (Unpublished). In: TERM meeting 2013. St. Feliu de Guixols, Spanien. 22.-24.05.2013.
de Turris, Valeria; Nicholson, Pamela; Orozco, Rodolfo Zamudio; Mühlemann, Oliver; Singer, Robert H. (2012). Retention of Nonsense mRNA at the Site of Transcription. In: Swiss RNA Workshop 2012 Abstracts.
Nicholson, Pamela; Yamashita, Akio; Mühlemann, Oliver (2012). Unrevelling the mechanism of RNA degradation in the nonsense-mediated mRNA decay pathway. In: Swiss RNA Workshop 2012 Posters.
Nicholson, Pamela; Mühlemann, Oliver (2012). Dissecting the mammalian nonsense-mediated mRNA decay pathway by a combined tethering / knockdown approach. In: 17th Annual Meeting of the RNA Society, Ann Arbor MI, USA.
Nicholson, Pamela; Mühlemann, Oliver (2012). Unrevelling the mammalian nonsense-mediated mRNA decay pathway by a combined tethering / knockdown approach. In: EMBO/EMBL Symposium 7.10.2012-10.10.2012 - The Complex Life of mRNA, Heidelberg (D) Posters.
Nicholson, Pamela; Mühlemann, Oliver (2011). Understanding the mechanism of mRNA degradation in the nonsense-mediated decay pathway. In: Swiss RNA Workshop January 2011. Bern: Universität Bern
Nicholson, Pamela; Mühlemann, Oliver (2011). Understanding the mechanism of RNA degradation in the mammalian nonsense-mediated mRNA decay pathway. In: Swiss RNA Workshop January 2011. RNA Society
Nicholson, Pamela; Mühlemann, Oliver (2010). Understanding the mechanism of RNA degradation in the nonsense-mediated mRNA decay pathway. In: Conference - Post transcriptional control: mRNA translation, localization and turnover, 8th-10th June, Edinburgh, Scotland.
Nicholson, Pamela; Stalder, Lukas; Eberle, Andrea; Bühler, Marc; Mühlemann, Oliver (2010). Investigating nonsense-mediated transcriptional gene silencing: a novel quality-control mechanism. In: Abstract Swiss RNA workshop January 2010 (p. 1). Bern: Universität Bern
De Turris, Valeria; Nicholson, Pamela; Zamudio, Rodolfo; Singer, Robert; Mühlemann, Oliver (2010). Live-cell imaging reveals that SMG6 and UPF1 inhibit release of nonsense mRNA from the transcription site. In: TERM 2010: RNA quality control meeting in Seillac, France.
Stalder, Lukas; Eberle, Andrea; Bühler, Marc; Nicholson, Pamela; Mühlemann, Oliver (2009). Nonsense-mediated transcriptional gene silencing: a puzzle far from being solved. In: Workshop "RNA Quality 2009", Gif sur Yvette, France, 13-15 May 2009. Strasbourg: European Science Foundation
Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Draft genome of Trypanosoma b. brucei EATRO1125 (AnTaR1 serodeme) strain [Dataset]. In: EATRO1125 (AnTaR1 serodeme) pseudo chromosomes.
Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Trypanosoma brucei EATRO1125 draft genome assembly (Contigs) [Dataset]. In: Trypanosoma brucei (EATRO1125) genome contigs.
