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Subissi, Lorenzo; Otieno, James Richard; Worp, Nathalie; Attar Cohen, Homa; Oude Munnink, Bas B; Abu-Raddad, Laith J; Alm, Erik; Barakat, Amal; Barclay, Wendy S; Bhiman, Jinal N; Caly, Leon; Chand, Meera; Chen, Mark; Cullinane, Ann; de Oliveira, Tulio; Drosten, Christian; Druce, Julian; Effler, Paul; El Masry, Ihab; Faye, Adama; ... (2024). An updated framework for SARS-CoV-2 variants reflects the unpredictability of viral evolution. Nature medicine, 30(9), pp. 2400-2403. Springer Nature 10.1038/s41591-024-02949-0
Zhu, Yanshan; Almeida, Flávia Jacqueline; Baillie, J Kenneth; Bowen, Asha C; Britton, Philip N; Brizuela, Martin Eduardo; Buonsenso, Danilo; Burgner, David; Chew, Keng Yih; Chokephaibulkit, Kulkanya; Cohen, Cheryl; Cormier, Stephania A; Crawford, Nigel; Curtis, Nigel; Farias, Camila G A; Gilks, Charles F; von Gottberg, Anne; Hamer, Diana; Jarovsky, Daniel; Jassat, Waasila; ... (2023). International Pediatric COVID-19 Severity Over the Course of the Pandemic. JAMA pediatrics, 177(10), pp. 1073-1084. American Medical Association 10.1001/jamapediatrics.2023.3117
Shaw, David; Abad, Raquel; Amin-Chowdhury, Zahin; Bautista, Adriana; Bennett, Desiree; Broughton, Karen; Cao, Bin; Casanova, Carlo; Choi, Eun Hwa; Chu, Yiu-Wai; Claus, Heike; Coelho, Juliana; Corcoran, Mary; Cottrell, Simon; Cunney, Robert; Cuypers, Lize; Dalby, Tine; Davies, Heather; de Gouveia, Linda; Deghmane, Ala-Eddine; ... (2023). Trends in invasive bacterial diseases during the first 2 years of the COVID-19 pandemic: analyses of prospective surveillance data from 30 countries and territories in the IRIS Consortium. The Lancet. Digital health, 5(9), e582-e593. Elsevier 10.1016/S2589-7500(23)00108-5
Müller, Annelies; Lekhuleni, Cebile; Hupp, Sabrina; du Plessis, Mignon; Holivololona, Lalaina; Babiichuk, Eduard; Leib, Stephen L.; Grandgirard, Denis; Iliev, Asparouh I.; von Gottberg, Anne; Hathaway, Lucy J. (2023). Meningitis-associated pneumococcal serotype 8, ST 53, strain is hypervirulent in a rat model and has non-haemolytic pneumolysin which can be attenuated by liposomes. Frontiers in cellular and infection microbiology, 12 Frontiers 10.3389/fcimb.2022.1106063
Tegally, Houriiyah; Moir, Monika; Everatt, Josie; Giovanetti, Marta; Scheepers, Cathrine; Wilkinson, Eduan; Subramoney, Kathleen; Makatini, Zinhle; Moyo, Sikhulile; Amoako, Daniel G; Baxter, Cheryl; Althaus, Christian L; Anyaneji, Ugochukwu J; Kekana, Dikeledi; Viana, Raquel; Giandhari, Jennifer; Lessells, Richard J; Maponga, Tongai; Maruapula, Dorcas; Choga, Wonderful; ... (2022). Emergence of SARS-CoV-2 Omicron lineages BA.4 and BA.5 in South Africa. Nature medicine, 28(9), pp. 1785-1790. Nature Publishing Group 10.1038/s41591-022-01911-2
Subissi, Lorenzo; von Gottberg, Anne; Thukral, Lipi; Worp, Nathalie; Oude Munnink, Bas B; Rathore, Surabhi; Abu-Raddad, Laith J; Aguilera, Ximena; Alm, Erik; Archer, Brett N; Attar Cohen, Homa; Barakat, Amal; Barclay, Wendy S; Bhiman, Jinal N; Caly, Leon; Chand, Meera; Chen, Mark; Cullinane, Ann; de Oliveira, Tulio; Drosten, Christian; ... (2022). An early warning system for emerging SARS-CoV-2 variants. Nature medicine, 28(6), pp. 1110-1115. Springer Nature 10.1038/s41591-022-01836-w
Viana, Raquel; Moyo, Sikhulile; Amoako, Daniel G; Tegally, Houriiyah; Scheepers, Cathrine; Althaus, Christian L.; Anyaneji, Ugochukwu J; Bester, Phillip A; Boni, Maciej F; Chand, Mohammed; Choga, Wonderful T; Colquhoun, Rachel; Davids, Michaela; Deforche, Koen; Doolabh, Deelan; du Plessis, Louis; Engelbrecht, Susan; Everatt, Josie; Giandhari, Jennifer; Giovanetti, Marta; ... (2022). Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa. Nature, 603(7902), pp. 679-686. Macmillan Journals Ltd. 10.1038/s41586-022-04411-y
Müller, Annelies; Kleynhans, Jackie; de Gouveia, Linda; Meiring, Susan; Cohen, Cheryl; Hathaway, Lucy Jane; von Gottberg, Anne (2022). Streptococcus pneumoniae Serotypes Associated with Death, South Africa, 2012-2018. Emerging infectious diseases, 28(1), pp. 166-179. Centers for Disease Control and Prevention 10.3201/eid2801.210956
Müller, Annelies; Schramm, Diana B; Kleynhans, Jackie; de Gouveia, Linda; Meiring, Susan; Ramette, Alban; von Gottberg, Anne; Hathaway, Lucy Jane (2021). Cytokine response in cerebrospinal fluid of meningitis patients and outcome associated with pneumococcal serotype. Scientific reports, 11(1), p. 19920. Springer Nature 10.1038/s41598-021-99190-3
Konings, Frank; Perkins, Mark D; Kuhn, Jens H; Pallen, Mark J; Alm, Erik J; Archer, Brett N; Barakat, Amal; Bedford, Trevor; Bhiman, Jinal N; Caly, Leon; Carter, Lisa L; Cullinane, Anne; de Oliveira, Tulio; Druce, Julian; El Masry, Ihab; Evans, Roger; Gao, George F; Gorbalenya, Alexander E; Hamblion, Esther; Herring, Belinda L; ... (2021). SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse [comment]. Nature microbiology, 6(7), pp. 821-823. Springer Nature 10.1038/s41564-021-00932-w
Brueggemann, Angela B; Jansen van Rensburg, Melissa J; Shaw, David; McCarthy, Noel D; Jolley, Keith A; Maiden, Martin C J; van der Linden, Mark P G; Amin-Chowdhury, Zahin; Bennett, Désirée E; Borrow, Ray; Brandileone, Maria-Cristina C; Broughton, Karen; Campbell, Ruth; Cao, Bin; Casanova, Carlo; Choi, Eun Hwa; Chu, Yiu Wai; Clark, Stephen A; Claus, Heike; Coelho, Juliana; ... (2021). Changes in the incidence of invasive disease due to Streptococcus pneumoniae, Haemophilus influenzae, and Neisseria meningitidis during the COVID-19 pandemic in 26 countries and territories in the Invasive Respiratory Infection Surveillance Initiative: a prospective analysis of surveillance data. The Lancet. Digital health, 3(6), e360-e370. Elsevier 10.1016/S2589-7500(21)00077-7
Knoll, Maria Deloria; Bennett, Julia C.; Garcia Quesada, Maria; Kagucia, Eunice W.; Peterson, Meagan E.; Feikin, Daniel R.; Cohen, Adam L.; Hetrich, Marissa K.; Yang, Yangyupei; Sinkevitch, Jenna N.; Ampofo, Krow; Aukes, Laurie; Bacci, Sabrina; Bigogo, Godfrey; Brandileone, Maria-Cristina C.; Bruce, Michael G.; Camilli, Romina; Castilla, Jesús; Chan, Guanhao; Chanto Chacón, Grettel; ... (2021). Global Landscape Review of Serotype-Specific Invasive Pneumococcal Disease Surveillance among Countries Using PCV10/13: The Pneumococcal Serotype Replacement and Distribution Estimation (PSERENADE) Project. Microorganisms, 9(4) MDPI 10.3390/microorganisms9040742
Bennett, Julia C.; Hetrich, Marissa K.; Garcia Quesada, Maria; Sinkevitch, Jenna N.; Knoll, Maria Deloria; Feikin, Daniel R.; Zeger, Scott L.; Kagucia, Eunice W.; Cohen, Adam L.; Ampofo, Krow; Brandileone, Maria-Cristina C.; Bruden, Dana; Camilli, Romina; Castilla, Jesús; Chan, Guanhao; Cook, Heather; Cornick, Jennifer E.; Dagan, Ron; Dalby, Tine; Danis, Kostas; ... (2021). Changes in Invasive Pneumococcal Disease Caused by Streptococcus pneumoniae Serotype 1 Following Introduction of PCV10 and PCV13: Findings from the PSERENADE Project. Microorganisms, 9(4) MDPI 10.3390/microorganisms9040696
Müller, Annelies; Salmen, Anke; Aebi, Susanne; de Gouveia, Linda; von Gottberg, Anne; Hathaway, Lucy J. (2020). Pneumococcal serotype determines growth and capsule size in human cerebrospinal fluid. BMC microbiology, 20(1), p. 16. BioMed Central 10.1186/s12866-020-1700-7
