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Planchette, Arielle Louise; Schmidt, Cédric; Burri, Olivier; Gomez de Agüero, Mercedes; Radenovic, Aleksandra; Mylonas, Alessio; Extermann, Jérôme (2023). Optical imaging of the small intestine immune compartment across scales. Communications biology, 6(1), p. 352. Springer Nature 10.1038/s42003-023-04642-3
Jakob, Manuel O; Spari, Daniel; Sánchez Taltavull, Daniel; Salm, Lilian; Yilmaz, Bahtiyar; Doucet Ladevèze, Rémi; Mooser, Catherine; Pereyra, David; Ouyang, Ye; Schmidt, Theresa; Mattiola, Irene; Starlinger, Patrick; Stroka, Deborah; Tschan, Franziska; Candinas, Daniel; Gasteiger, Georg; Klose, Christoph S N; Diefenbach, Andreas; Gomez de Agüero, Mercedes and Beldi, Guido (2023). ILC3s restrict the dissemination of intestinal bacteria to safeguard liver regeneration after surgery. Cell reports, 42(3), p. 112269. Cell Press 10.1016/j.celrep.2023.112269
Shmeleva, Evgeniya V; Gomez de Agüero, Mercedes; Wagner, Josef; Enright, Anton J; Macpherson, Andrew J; Ferguson, Brian J; Smith, Geoffrey L (2022). Smallpox vaccination induces a substantial increase in commensal skin bacteria that promote pathology and influence the host response. PLoS pathogens, 18(4), e1009854. Public Library of Science 10.1371/journal.ppat.1009854
Mossad, Omar; Batut, Bérénice; Yilmaz, Bahtiyar; Dokalis, Nikolaos; Mezö, Charlotte; Nent, Elisa; Nabavi, Lara Susann; Mayer, Melanie; Maron, Feres José Mocayar; Buescher, Joerg M; Gomez de Agüero, Mercedes; Szalay, Antal; Lämmermann, Tim; Macpherson, Andrew J; Ganal-Vonarburg, Stephanie C; Backofen, Rolf; Erny, Daniel; Prinz, Marco; Blank, Thomas (2022). Gut microbiota drives age-related oxidative stress and mitochondrial damage in microglia via the metabolite N6-carboxymethyllysine. Nature neuroscience, 25(3), pp. 295-305. Nature America 10.1038/s41593-022-01027-3
Zindel, Joel; Mittner, Jonas; Bayer, Julia; April-Monn, Simon L.; Kohler, Andreas; Nusse, Ysbrand; Dosch, Michel; Büchi, Isabel; Sanchez-Taltavull, Daniel; Dawson, Heather; Gomez de Agüero, Mercedes; Asahina, Kinji; Kubes, Paul; Macpherson, Andrew J.; Stroka, Deborah; Candinas, Daniel (2021). Intraperitoneal microbial contamination drives post-surgical peritoneal adhesions by mesothelial EGFR-signaling. Nature Communications, 12(1), p. 7316. Springer Nature 10.1038/s41467-021-27612-x
Sankowski, Roman; Ahmari, Jasmin; Mezö, Charlotte; Hrabě de Angelis, Anna Lena; Fuchs, Vidmante; Utermöhlen, Olaf; Buch, Thorsten; Blank, Thomas; Gomez de Agüero, Mercedes; Macpherson, Andrew J; Erny, Daniel (2021). Commensal microbiota divergently affect myeloid subsets in the mammalian central nervous system during homeostasis and disease. The EMBO journal, 40(23), e108605. EMBO Press 10.15252/embj.2021108605
Erny, Daniel; Dokalis, Nikolaos; Mezö, Charlotte; Castoldi, Angela; Mossad, Omar; Staszewski, Ori; Frosch, Maximilian; Villa, Matteo; Fuchs, Vidmante; Mayer, Arun; Neuber, Jana; Sosat, Janika; Tholen, Stefan; Schilling, Oliver; Vlachos, Andreas; Blank, Thomas; Gomez de Agüero, Mercedes; Macpherson, Andrew J; Pearce, Edward J and Prinz, Marco (2021). Microbiota-derived acetate enables the metabolic fitness of the brain innate immune system during health and disease. Cell metabolism, 33(11), 2260-2276.e7. Elsevier 10.1016/j.cmet.2021.10.010
Aswendt, Markus; Green, Claudia; Sadler, Rebecca; Llovera, Gemma; Dzikowski, Lauren; Heindl, Steffanie; Gomez de Agüero, Mercedes; Diedenhofen, Michael; Vogel, Stefanie; Wieters, Frederique; Wiedermann, Dirk; Liesz, Arthur; Hoehn, Mathias (2021). The gut microbiota modulates brain network connectivity under physiological conditions and after acute brain ischemia. iScience, 24(10), p. 103095. Elsevier 10.1016/j.isci.2021.103095
Yilmaz, Bahtiyar; Mooser, Catherine; Keller, Irene; Li, Hai; Zimmermann, Jakob; Bosshard, Lars; Fuhrer, Tobias; Gomez de Agüero, Mercedes; Fernandez Trigo, Nerea; Tschanz-Lischer, Heidi; Limenitakis, Julien P.; Hardt, Wolf-Dietrich; McCoy, Kathleen; Stecher, Bärbel; Excoffier, Laurent; Sauer, Uwe; Ganal-Vonarburg, Stephanie C.; Macpherson, Andrew J. (2021). Long-term evolution and short-term adaptation of microbiota strains and sub-strains in mice. Cell host & microbe, 29(4), 650-663.e9. Cell Press 10.1016/j.chom.2021.02.001
Colombo, Alessio Vittorio; Sadler, Rebecca Katie; Llovera, Gemma; Singh, Vikramjeet; Roth, Stefan; Heindl, Steffanie; Sebastian Monasor, Laura; Verhoeven, Aswin; Peters, Finn; Parhizkar, Samira; Kamp, Frits; Gomez de Aguero, Mercedes; Macpherson, Andrew; Winkler, Edith; Herms, Jochen; Benakis, Corinne; Dichgans, Martin; Steiner, Harald; Giera, Martin; Haass, Christian; ... (2021). Microbiota-derived short chain fatty acids modulate microglia and promote Aβ plaque deposition. eLife, 10 eLife Sciences Publications 10.7554/eLife.59826
Pfister, Simona P.; Schären, Olivier P.; Beldi, Luca; Printz, Andrea; D. Notter, Matheus; Mukherjee, Mohana; Li, Hai; Limenitakis, Julien P.; Werren, Joel P.; Tandon, Disha; Cuenca, Miguelangel; Hagemann, Stefanie; Uster, Stephanie S.; Terrazos, Miguel A.; Gomez de Agüero, Mercedes; Schürch, Christian M.; M. Coelho, Fernanda; Curtiss, Roy; Slack, Emma; Balmer, Maria L; ... (2021). Author Correction: Uncoupling of invasive bacterial mucosal immunogenicity from pathogenicity. Nature Communications, 12(1), p. 798. Springer Nature 10.1038/s41467-021-21096-5
Mezö, Charlotte; Dokalis, Nikolaos; Mossad, Omar; Staszewski, Ori; Neuber, Jana; Yilmaz, Bahtiyar; Schnepf, Daniel; Gomez de Agüero, Mercedes; Ganal-Vonarburg, Stephanie C.; Macpherson, Andrew J.; Meyer-Luehmann, Melanie; Staeheli, Peter; Blank, Thomas; Prinz, Marco; Erny, Daniel (2020). Different effects of constitutive and induced microbiota modulation on microglia in a mouse model of Alzheimer's disease. Acta neuropathologica communications, 8(1), p. 119. BioMed Central 10.1186/s40478-020-00988-5
Healy, Marc E; Boege, Yannick; Hodder, Michael C; Böhm, Friederike; Malehmir, Mohsen; Scherr, Anna-Lena; Jetzer, Jasna; Chan, Lap Kwan; Parrotta, Rossella; Jacob, Kurt; Clerbaux, Laure-Alix; Kreutzer, Susanne; Campbell, Andrew; Gilchrist, Ella; Gilroy, Kathryn; Rodewald, Ann-Katrin; Honcharova-Biletska, Hanna; Schimmer, Roman; Vélez, Karelia; Büeler, Simone; ... (2020). MCL1 Is Required for Maintenance of Intestinal Homeostasis and Prevention of Carcinogenesis in Mice. Gastroenterology, 159(1), pp. 183-199. Elsevier 10.1053/j.gastro.2020.03.017
Pfister, Simona; Schären, Olivier P.; Beldi, Luca; Printz, Andrea; Notter, Matheus D.; Mukherjee, Mohana; Li, Hai; Limenitakis, Julien P.; Werren, Joel P.; Tandon, Disha; Cuenca Vera, Miguelangel; Hagemann, Stefanie Claudia; Uster, Stephanie S.; Terrazos, Miguel A.; Gomez de Agüero, Mercedes; Schürch, Christian M.; Matos Coelho, Fernanda; Curtiss, Roy; Slack, Emma; Balmer, Maria L.; ... (2020). Uncoupling of invasive bacterial mucosal immunogenicity from pathogenicity. Nature Communications, 11(1), p. 1978. Springer Nature 10.1038/s41467-020-15891-9
Lehmann, Frank Michael; von Burg, Nicole; Ivanek, Robert; Teufel, Claudia; Horvath, Edit; Peter, Annick; Turchinovich, Gleb; Staehli, Daniel; Eichlisberger, Tobias; Gomez de Agüero, Mercedes; Coto-Llerena, Mairene; Prchal-Murphy, Michaela; Sexl, Veronika; Bentires-Alj, Mohamed; Mueller, Christoph; Finke, Daniela (2020). Microbiota-induced tissue signals regulate ILC3-mediated antigen presentation. Nature communications, 11(1), p. 1794. Nature Publishing Group 10.1038/s41467-020-15612-2
Obata, Yuuki; Castaño, Álvaro; Boeing, Stefan; Bon-Frauches, Ana Carina; Fung, Candice; Fallesen, Todd; Gomez de Agüero, Mercedes; Yilmaz, Bahtiyar; Lopes, Rita; Huseynova, Almaz; Horswell, Stuart; Maradana, Muralidhara Rao; Boesmans, Werend; Vanden Berghe, Pieter; Murray, Andrew J; Stockinger, Brigitta; Macpherson, Andrew J.; Pachnis, Vassilis (2020). Neuronal programming by microbiota regulates intestinal physiology. Nature, 578(7794), pp. 284-289. Springer Nature 10.1038/s41586-020-1975-8
Jakob, Manuel O.; Sánchez-Taltavull, Daniel; Yilmaz, Bahtiyar; Malinka, Thomas; Mooser, Catherine; Spari, Daniel; Salm, Lilian A.; Freiburghaus, Katrin; Pereyra, David; Hapfelmeier, Siegfried; Masoodi, Mojgan; Starlinger, Patrick; Stroka, Deborah; Tschan, Franziska; Candinas, Daniel; Gomez de Agüero, Mercedes; Beldi, Guido (19 September 2019). Compartmentalization of intestinal bacteria by hepatic ILC3s prevents infections after surgery (bioRxiv). Cold Spring Harbor Laboratory 10.1101/773150
Radulovic, Katarina; Ayata, C Korcan; Mak'Anyengo, Rachel; Lechner, Kristina; Wuggenig, Philipp; Kaya, Berna; Hruz, Petr; Gomez de Agüero, Mercedes; Broz, Petr; Weigmann, Benno; Niess, Jan Hendrik (2019). NLRP6 Deficiency in CD4 T Cells Decreases T Cell Survival Associated with Increased Cell Death. Journal of immunology, 203(2), pp. 544-556. American Association of Immunologists 10.4049/jimmunol.1800938
Fabbiano, Salvatore; Suárez-Zamorano, Nicolas; Chevalier, Claire; Lazarević, Vladimir; Kieser, Silas; Rigo, Dorothée; Leo, Stefano; Veyrat-Durebex, Christelle; Gaïa, Nadia; Maresca, Marcello; Merkler, Doron; Gomez de Agüero Tamargo, Maria de la Mercedes; Macpherson, Andrew; Schrenzel, Jacques; Trajkovski, Mirko (2018). Functional Gut Microbiota Remodeling Contributes to the Caloric Restriction-Induced Metabolic Improvements. Cell metabolism, 28(6), 907-921.e7. Cell Press 10.1016/j.cmet.2018.08.005
Uchimura, Yasuhiro; Fuhrer, Tobias; Li, Hai; Lawson, Melissa A.; Zimmermann, Michael; Yilmaz, Bahtiyar; Zindel, Joel; Ronchi, Francesca; Sorribas Olivera, Marcel; Hapfelmeier, Siegfried; Ganal-Vonarburg, Stephanie C.; Gomez de Agüero, Mercedes; McCoy, Kathleen D.; Sauer, Uwe; Macpherson, Andrew J. (2018). Antibodies Set Boundaries Limiting Microbial Metabolite Penetration and the Resultant Mammalian Host Response. Immunity, 49(3), 545-559.e5. Cell Press 10.1016/j.immuni.2018.08.004
Mooser, Catherine; Gomez de Agüero Tamargo, Maria de la Mercedes; Ganal-Vonarburg, Stephanie (2018). Standardization in host-microbiota interaction studies: challenges, gnotobiology as a tool, and perspective. Current opinion in microbiology, 44, pp. 50-60. Elsevier 10.1016/j.mib.2018.07.007
Girard-Madoux, Mathilde J H; Gomez de Agüero Tamargo, Maria de la Mercedes; Ganal-Vonarburg, Stephanie; Mooser, Catherine; Belz, Gabrielle T; Macpherson, Andrew; Vivier, Eric (2018). The immunological functions of the Appendix: An example of redundancy? Seminars in immunology, 36, pp. 31-44. Elsevier 10.1016/j.smim.2018.02.005
Macpherson, Andrew; Gomez de Agüero Tamargo, Maria de la Mercedes; Ganal-Vonarburg, Stephanie (2017). How nutrition and the maternal microbiota shape the neonatal immune system. Nature reviews - immunology, 17(8), pp. 508-517. Nature Publishing Group 10.1038/nri.2017.58
Gomez de Agüero Tamargo, Maria de la Mercedes; Ganal-Vonarburg, Stephanie C; Fuhrer, Tobias; Rupp, Sandra Carina; Uchimura, Yasuhiro; Li, Hai; Steinert, Anna; Heikenwalder, Mathias; Hapfelmeier, Siegfried Hektor; Sauer, Uwe; McCoy, Kathleen; Macpherson, Andrew (2016). The maternal microbiota drives early postnatal innate immune development. Science, 351(6279), pp. 1296-1302. American Association for the Advancement of Science 10.1126/science.aad2571
Kudira, Ramesh; Malinka, Thomas; Kohler, Andreas; Dosch, Michel; Gomez de Agüero Tamargo, Maria de la Mercedes; Melin, Nicolas; Haegele, S; Starlinger, P; Maharjan, Niran; Saxena, Smita; Keogh, Adrian; Keogh-Stroka, Deborah M.; Candinas, Daniel; Beldi, Guido (2016). P2X1 regulated IL-22 secretion by innate lymphoid cells is required for efficient liver regeneration. Hepatology, 63(6), pp. 2004-2017. Wiley Interscience 10.1002/hep.28492
Kudira, Ramesh; Malinka, Thomas; Kohler, Andreas; Dosch, Michel; Gomez de Agüero Tamargo, Maria de la Mercedes; Melin, Nicolas; Haegele, S; Starlinger, P; Maharjan, Niran; Saxena, Smita; Keogh, Adrian; Keogh-Stroka, Deborah M.; Candinas, Daniel; Beldi, Guido (2016). P2X1 regulated IL-22 secretion by innate lymphoid cells is required for efficient liver regeneration (Unpublished). In: Keystone Symposium. Vancouver. 29.01.2016.
Gomez de Agüero Tamargo, Maria de la Mercedes (October 2015). Maternal microbiota educates the immune system of the offspring through natural antibodies (Unpublished). In: Jahreskongress Schweizerische Gesellschaft für Gastroenterologie (SGG). Interlaken. 01.-02.10.2015.
Gomez de Agüero Tamargo, Maria de la Mercedes (July 2015). Maternal microbiota educates the immune system of the offspring through the antibodies (Unpublished). In: 17th International Congress of Mucosal Immunology (ICMI). Berlin. 14.-18.07.2015.
Ganal, Stephanie; Gomez de Agüero Tamargo, Maria de la Mercedes (5 June 2015). Role of maternal microbiota in modulating gene expression and immunity in the neonatal intestine (Unpublished). In: Genomics Day. Bern. 05.06.2015.
Gomez de Agüero Tamargo, Maria de la Mercedes (15 December 2014). Microbiota exposure during the pregnancy and the development of the innate immunity of the offspring (Unpublished). In: Sinergia retreat. Bern. 15.12.2014.
Gomez de Agüero Tamargo, Maria de la Mercedes (20 October 2014). Microbiota exposure during the pregnancy and the development of the innate immunity of the offspring (Unpublished). In: Sinergia meeting. Basel. 20.10.2014.
Kudira, Ramesh; Malinka, Thomas; Gomez de Agüero Tamargo, Maria de la Mercedes; Keogh, Adrian; Furer, Cynthia; Keogh-Stroka, Deborah M.; Candinas, Daniel; Beldi, Guido (September 2014). Secretion of IL-22 is modulated by CD39 and is required for liver regeneration post partial hepatectomy. In: Schweizerische Gesellschaft für Gastroenterologie (SGG) - Schweizerische Gesellschaft für Viszeralchirurgie (SGVC) Annual Congress. Interlaken. 11.-12.9.2014.
Kudira, Ramesh; Malinka, Thomas; Gomez de Agüero Tamargo, Maria de la Mercedes; Keogh, Adrian; Furer, Cynthia; Keogh-Stroka, Deborah M.; Candinas, Daniel; Beldi, Guido (September 2014). Travel Award: Secretion of IL-22 is modulated by CD39 and is required for liver regeneration post partial hepatectomy (Unpublished). In: Schweizerische Gesellschaft für Gastroenterologie (SGG) - Schweizerische Gesellschaft für Viszeralchirurgie (SGVC) Annual Congress. Interlaken. 11.-12.09.2014.
Gomez de Agüero Tamargo, Maria de la Mercedes (29 April 2014). Commensal microbiota exposure during the pregnancy shapes the development of the innate immune cell of the offspring (Unpublished). In: Sinergia meeting. Zurich. 29.04.2014.
Gomez de Agüero Tamargo, Maria de la Mercedes (20 January 2014). Impact of commensal microbiota on the development and shaping of innate immune cells (Unpublished). In: Sinergia retreat. Bern. 20.01.2014.
