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Jermain, Peter R; Oswald, Martin; Langdun, Tenzin; Wright, Santana; Khan, Ashraf; Stadelmann, Thilo; Abdulkadir, Ahmed; Yaroslavsky, Anna N (2024). Deep learning-based cell segmentation for rapid optical cytopathology of thyroid cancer. Scientific Reports, 14(16389) Nature Publishing Group 10.1038/s41598-024-64855-2
Wyss, Patric; Ginsbourger, David; Shou, Haochang; Davatzikos, Christos; Klöppel, Stefan; Abdulkadir, Ahmed (2023). Adaptive data-driven selection of sequences of biological and cognitive markers in pre-clinical diagnosis of dementia. Scientific Reports, 13(1), p. 6406. Nature Publishing Group 10.1038/s41598-023-32867-z
Novak, Lan; Wyss, Patric; Lenouvel, Eric; Abdulkadir, Ahmed; Klöppel, Stefan (2021). Informant Questionnaires in Dedicated Memory Clinics: How Much Do They Contribute? Journal of the American Geriatrics Society, 69(1), pp. 106-113. Wiley-Blackwell 10.1111/jgs.16818
Rathore, Saima; Chaddad, Ahmad; Iftikhar, Muhammad A.; Bilello, Michel; Abdulkadir, Ahmed (2021). Combining MRI and Histologic Imaging Features for Predicting Overall Survival in Patients with Glioma. Radiology: Imaging Cancer, 3(4), e200108. Radiological Society of North America RSNA 10.1148/rycan.2021200108
Anastasopoulos, Constantin; Yang, Shan; Pradella, Maurice; Akinci D’Antonoli, Tugba; Knecht, Sven; Cyriac, Joshy; Reisert, Marco; Kellner, Elias; Achermann, Rita; Haaf, Philip; Stieltjes, Bram; Sauter, Alexander W.; Bremerich, Jens; Sommer, Gregor; Abdulkadir, Ahmed (2021). Atri-U: assisted image analysis in routine cardiovascular magnetic resonance volumetry of the left atrium. Journal of cardiovascular magnetic resonance, 23(1), p. 133. BioMed Central 10.1186/s12968-021-00791-8
Rashid, Tanweer; Abdulkadir, Ahmed; Nasrallah, Ilya M.; Ware, Jeffrey B.; Liu, Hangfan; Spincemaille, Pascal; Romero, J. Rafael; Bryan, R. Nick; Heckbert, Susan R.; Habes, Mohamad (2021). DEEPMIR: a deep neural network for differential detection of cerebral microbleeds and iron deposits in MRI. Scientific reports, 11(1), p. 14124. Springer Nature 10.1038/s41598-021-93427-x
Viher, Petra; Abdulkadir, Ahmed; Savadijev, Peter; Stegmayer, Katharina; Kubicki, Marek; Makris, Nikos; Karmacharya, Sarina; Federspiel, Andrea; Bohlhalter, Stephan; Vanbellingen, Tim; Müri, René; Wiest, Roland; Strik, Werner; Walther, Sebastian (2020). Structural organization of the praxis network predicts gesture production: Evidence from healthy subjects and patients with schizophrenia. Cortex, 132, pp. 322-333. Elsevier 10.1016/j.cortex.2020.05.023
Egger, Karl; Rau, Alexander; Yang, Shan; Klöppel, Stefan; Abdulkadir, Ahmed; Kellner, Elias; Frings, Lars; Hellwig, Sabine; Urbach, Horst (2020). Automated voxel- and region-based analysis of gray matter and cerebrospinal fluid space in primary dementia disorders. Brain research, 1739, p. 146800. Elsevier 10.1016/j.brainres.2020.146800
Gesierich, Benno; Tuladhar, Anil Man; Telgte, Annemieke; Wiegertjes, Kim; Konieczny, Marek J.; Finsterwalder, Sofia; Hübner, Mathias; Pirpamer, Lukas; Koini, Marisa; Abdulkadir, Ahmed; Franzmeier, Nicolai; Norris, David G.; Marques, José P.; zu Eulenburg, Peter; Ewers, Michael; Schmidt, Reinhold; Leeuw, Frank‐Erik; Duering, Marco (2020). Alterations and test–retest reliability of functional connectivity network measures in cerebral small vessel disease. Human brain mapping, 41(10), pp. 2629-2641. Wiley-Blackwell 10.1002/hbm.24967
Rathore, Saima; Abdulkadir, Ahmed; Davatzikos, Christos (2020). Analysis of MRI Data in Diagnostic Neuroradiology. Annual Review of Biomedical Data Science, 3(1), pp. 365-390. 10.1146/annurev-biodatasci-022620-015538
Anastasopoulos, Constantin; Weikert, Thomas; Yang, Shan; Abdulkadir, Ahmed; Schmülling, Lena; Bühler, Claudia; Paciolla, Fabiano; Sexauer, Raphael; Cyriac, Joshy; Nesic, Ivan; Twerenbold, Raphael; Bremerich, Jens; Stieltjes, Bram; Sauter, Alexander W.; Sommer, Gregor (2020). Development and clinical implementation of tailored image analysis tools for COVID-19 in the midst of the pandemic: The synergetic effect of an open, clinically embedded software development platform and machine learning. European journal of radiology, 131, p. 109233. Elsevier 10.1016/j.ejrad.2020.109233
La Rosa, Francesco; Beck, Erin S.; Abdulkadir, Ahmed; Thiran, Jean-Philippe; Reich, Daniel S.; Sati, Pascal; Bach Cuadra, Meritxell (2020). Automated Detection of Cortical Lesions in Multiple Sclerosis Patients with 7T MRI. In: Martel, Anne L.; Abolmaesumi, Purang; Stoyanov, Danail; Mateus, Diana; Zuluaga, Maria A.; Zhou, S. Kevin; Racoceanu, Daniel; Joskowicz, Leo (eds.) Medical Image Computing and Computer Assisted Intervention. Lecture Notes in Computer Science: Vol. 12264 (pp. 584-593). Cham: Springer International Publishing 10.1007/978-3-030-59719-1_57
La Rosa, Francesco; Abdulkadir, Ahmed; Fartaria, Mário João; Rahmanzadeh, Reza; Lu, Po-Jui; Galbusera, Riccardo; Barakovic, Muhamed; Thiran, Jean-Philippe; Granziera, Cristina; Cuadra, Merixtell Bach (2020). Multiple sclerosis cortical and WM lesion segmentation at 3T MRI: a deep learning method based on FLAIR and MP2RAGE. NeuroImage: Clinical, 27, p. 102335. Elsevier 10.1016/j.nicl.2020.102335
Falk, Thorsten; Mai, Dominic; Bensch, Robert; Çiçek, Özgün; Abdulkadir, Ahmed; Marrakchi, Yassine; Böhm, Anton; Deubner, Jan; Jäckel, Zoe; Seiwald, Katharina; Dovzhenko, Alexander; Tietz, Olaf; Dal Bosco, Cristina; Walsh, Sean; Saltukoglu, Deniz; Tay, Tuan Leng; Prinz, Marco; Palme, Klaus; Simons, Matias; Diester, Ilka; ... (2019). U-Net: deep learning for cell counting, detection, and morphometry. Nature methods, 16(1), pp. 67-70. Nature Publishing Group 10.1038/s41592-018-0261-2
Minkova, Lora; Peter, Jessica; Abdulkadir, Ahmed; Schumacher, Lena V.; Kaller, Christoph P.; Nissen, Christoph; Klöppel, Stefan; Lahr, Jacob (2019). Determinants of Inter-Individual Variability in Corticomotor Excitability Induced by Paired Associative Stimulation. Frontiers in neuroscience, 13(841), p. 841. Frontiers Research Foundation 10.3389/fnins.2019.00841
Klink, Katharina; Abdulkadir, Ahmed; Minkova, Lora; Grothe, Michel; Teipel, Stefan; Schumacher, Lena V.; Kaller, Christoph P.; Lahr, Jacob; Klöppel, Stefan; Peter, Jessica (28 November 2018). Predicting verbal episodic memory changes with longitudinal measures of brain atrophy in mild cognitive impairment (Unpublished). In: DGPPN. Berlin. 2018.
Klöppel, Stefan; Kotschi, Maria; Peter, Jessica; Egger, Karl; Hausner, Lucrezia; Frölich, Lutz; Förster, Alex; Heimbach, Bernhard; Normann, Claus; Vach, Werner; Urbach, Horst; Abdulkadir, Ahmed (2018). Separating Symptomatic Alzheimer’s Disease from Depression based on Structural MRI. Journal of Alzheimer's disease, 63(1), pp. 353-363. IOS Press 10.3233/JAD-170964
Viher, Petra Verena; Abdulkadir, Ahmed; Stegmayer, Katharina; Savadijev, Peter; Kubicki, Marek; Makris, Nikos; Karmacharya, Sarina; Federspiel, Andrea; Bohlhalter, Stephan; Vanbellingen, Tim; Müri, René Martin; Wiest, Roland; Strik, Werner; Walther, Sebastian (1 April 2018). T177. Structural organization of the praxis network predicts gesture production: evidence from healthy subjects and patients with schizophrenia. Schizophrenia bulletin, 44(suppl_1), S184-S185. Oxford University Press 10.1093/schbul/sby016.453
Peter, Jessica; Schumacher, Lena V.; Landerer, Verena; Abdulkadir, Ahmed; Kaller, Christoph P.; Lahr, Jacob; Klöppel, Stefan (2018). Biological Factors Contributing to the Response to Cognitive Training in Mild Cognitive Impairment. Journal of Alzheimer's disease, 61(1), pp. 333-345. IOS Press 10.3233/JAD-170580
Peter, Jessica; Sandkamp, Richard; Minkova, Lora; Schumacher, Lena V.; Kaller, Christoph P.; Abdulkadir, Ahmed; Klöppel, Stefan (2018). Real-world navigation in amnestic mild cognitive impairment: the relation to visuospatial memory and volume of hippocampal subregions. Neuropsychologia, 109, pp. 86-94. Elsevier 10.1016/j.neuropsychologia.2017.12.014
Minkova, Lora; Gregory, Sarah; Scahill, Rachael I.; Abdulkadir, Ahmed; Kaller, Christoph P.; Peter, Jessica; Long, Jeffrey D.; Stout, Julie C.; Reilmann, Ralf; Roos, Raymund A.; Durr, Alexandra; Leavitt, Blair R.; Tabrizi, Sarah J.; Klöppel, Stefan (2018). Cross-sectional and longitudinal voxel-based grey matter asymmetries in Huntington's disease. NeuroImage: Clinical, 17, pp. 312-324. Elsevier 10.1016/j.nicl.2017.10.023
Holiga, Stefan; Abdulkadir, Ahmed; Klöppel, Stefan; Dukart, Juergen (2018). Functional Magnetic Resonance Imaging in Alzheimer' Disease Drug Development. In: Biomarkers for Alzheimer’s Disease Drug Development. Methods in Molecular Biology: Vol. 1750 (pp. 159-163). Springer 10.1007/978-1-4939-7704-8_10
Klöppel, Stefan; Kellner, Elias; Reisert, Marco; Heimbach, Bernhard; Urbach, Horst; Linn, Jennifer; Weidauer, Stefan; Andres, Tamara; Bröse, Maximilian; Lahr, Jacob; Lützen, Niklas; Meyer, Philipp T.; Peter, Jessica; Abdulkadir, Ahmed; Hellwig, Sabine; Egger, Karl (2018). Voxel-wise deviations from healthy aging for the detection of region-specific atrophy. NeuroImage: Clinical, 20, pp. 851-860. Elsevier 10.1016/j.nicl.2018.09.013
Habich, Annegret; Klöppel, Stefan; Abdulkadir, Ahmed; Scheller, Elisa; Nissen, Christoph; Peter, Jessica (2017). Anodal tDCS Enhances Verbal Episodic Memory in Initially Low Performers. Frontiers in human neuroscience, 11(542), p. 542. Frontiers Research Foundation 10.3389/fnhum.2017.00542
