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Mattick, John S; Amaral, Paulo P; Carninci, Piero; Carpenter, Susan; Chang, Howard Y; Chen, Ling-Ling; Chen, Runsheng; Dean, Caroline; Dinger, Marcel E; Fitzgerald, Katherine A; Gingeras, Thomas R; Guttman, Mitchell; Hirose, Tetsuro; Huarte, Maite; Johnson, Rory; Kanduri, Chandrasekhar; Kapranov, Philipp; Lawrence, Jeanne B; Lee, Jeannie T; Mendell, Joshua T; ... (2023). Long non-coding RNAs: definitions, functions, challenges and recommendations. Nature reviews. Molecular cell biology, 24(6), pp. 430-447. Springer Nature 10.1038/s41580-022-00566-8
Moore, Jill E; Purcaro, Michael J; Pratt, Henry E; Epstein, Charles B; Shoresh, Noam; Adrian, Jessika; Kawli, Trupti; Davis, Carrie A; Dobin, Alexander; Kaul, Rajinder; Halow, Jessica; Van Nostrand, Eric L; Freese, Peter; Gorkin, David U; Shen, Yin; He, Yupeng; Mackiewicz, Mark; Pauli-Behn, Florencia; Williams, Brian A; Mortazavi, Ali; ... (2020). Expanded encyclopaedias of DNA elements in the human and mouse genomes. Nature, 583(7818), pp. 699-710. Springer Nature 10.1038/s41586-020-2493-4
Snyder, Michael P; Gingeras, Thomas R; Moore, Jill E; Weng, Zhiping; Gerstein, Mark B; Ren, Bing; Hardison, Ross C; Stamatoyannopoulos, John A; Graveley, Brenton R; Feingold, Elise A; Pazin, Michael J; Pagan, Michael; Gilchrist, Daniel A; Hitz, Benjamin C; Cherry, J Michael; Bernstein, Bradley E; Mendenhall, Eric M; Zerbino, Daniel R; Frankish, Adam; Flicek, Paul; ... (2020). Perspectives on ENCODE. Nature, 583(7818), pp. 693-698. 10.1038/s41586-020-2449-8
Lagarde, Julien; Uszczynska-Ratajczak, Barbara; Carbonell, Silvia; Pérez-Lluch, Sílvia; Abad, Amaya; Davis, Carrie; Gingeras, Thomas R; Frankish, Adam; Harrow, Jennifer; Guigo, Roderic; Johnson, Rory (2017). High-throughput annotation of full-length long noncoding RNAs with capture long-read sequencing. Nature genetics, 49(12), pp. 1731-1740. Nature America 10.1038/ng.3988
