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Gmel, Annik; Ricard, Anne; Gerber, Vinzenz; Neuditschko, Markus (2024). Population structure and genomic diversity of the Einsiedler horse. (In Press). Animal genetics Wiley 10.1111/age.13421
Lindtke, Dorothea; Seefried, Franz R; Drögemüller, Cord; Neuditschko, Markus (2023). Increased heterozygosity in low-pass sequencing data allows identification of blood chimeras in cattle. Animal genetics, 54(5), pp. 613-618. Wiley 10.1111/age.13334
Gmel, Annik Imogen; Burger, Dominik; Neuditschko, Markus (2021). A Novel QTL and a Candidate Gene Are Associated with the Progressive Motility of Franches-Montagnes Stallion Spermatozoa after Thaw. Genes, 12(10), p. 1501. MDPI, Molecular Diversity Preservation International 10.3390/genes12101501
Grilz-Seger, Gertrud; Reiter, Simone; Neuditschko, Markus; Wallner, Barbara; Rieder, Stefan; Leeb, Tosso; Jagannathan, Vidya; Mesarič, Matjaz; Cotman, Markus; Pausch, Hubert; Lindgren, Gabriella; Velie, Brandon; Horna, Michaela; Brem, Gottfried; Druml, Thomas (2020). A Genome-Wide Association Analysis in Noriker Horses Identifies a SNP Associated With Roan Coat Color. Journal of equine veterinary science, 88, p. 102950. Elsevier 10.1016/j.jevs.2020.102950
Gmel, Annik Imogen; Druml, Thomas; von Niederhäusern, Rudolf; Leeb, Tosso; Neuditschko, Markus (2019). Genome-Wide Association Studies Based on Equine Joint Angle Measurements Reveal New QTL Affecting the Conformation of Horses. Genes, 10(5) MDPI, Molecular Diversity Preservation International 10.3390/genes10050370
Felkel, Sabine; Vogl, Claus; Rigler, Doris; Dobretsberger, Viktoria; Chowdhary, Bhanu P; Distl, Ottmar; Fries, Ruedi; Jagannathan, Vidya; Janečka, Jan E; Leeb, Tosso; Lindgren, Gabriella; McCue, Molly; Metzger, Julia; Neuditschko, Markus; Rattei, Thomas; Raudsepp, Terje; Rieder, Stefan; Rubin, Carl-Johan; Schaefer, Robert; Schlötterer, Christian; ... (2019). The horse Y chromosome as an informative marker for tracing sire lines. Scientific Reports, 9(1), p. 6095. Nature Publishing Group 10.1038/s41598-019-42640-w
Wallner, Barbara; Palmieri, Nicola; Vogl, Claus; Rigler, Doris; Bozlak, Elif; Druml, Thomas; Jagannathan, Vidhya; Leeb, Tosso; Fries, Ruedi; Tetens, Jens; Thaller, Georg; Metzger, Julia; Distl, Ottmar; Lindgren, Gabriella; Rubin, Carl-Johan; Andersson, Leif; Schaefer, Robert; McCue, Molly; Neuditschko, Markus; Rieder, Stefan; ... (2017). Y Chromosome Uncovers the Recent Oriental Origin of Modern Stallions. Current Biology, 27(13), pp. 2029-2035. Cell Press 10.1016/j.cub.2017.05.086
Librado, Pablo; Gamba, Cristina; Gaunitz, Charleen; Der Sarkissian, Clio; Pruvost, Mélanie; Albrechtsen, Anders; Fages, Antoine; Khan, Naveed; Schubert, Mikkel; Jagannathan, Vidhya; Serres-Armero, Aitor; Kuderna, Lukas F K; Povolotskaya, Inna S; Seguin-Orlando, Andaine; Lepetz, Sébastien; Neuditschko, Markus; Thèves, Catherine; Alquraishi, Saleh; Alfarhan, Ahmed H; Al-Rasheid, Khaled; ... (2017). Ancient genomic changes associated with domestication of the horse. Science, 356(6336), pp. 442-445. American Association for the Advancement of Science 10.1126/science.aam5298
Bauer, Anina Estrella; Hiemesch, Theresa; Jagannathan, Vidhya; Neuditschko, Markus; Bachmann, Iris; Rieder, Stefan; Mikko, Sofia; Penedo, M Cecilia; Tarasova, Nadja; Vitková, Martina; Sirtori, Nicolò; Roccabianca, Paola; Leeb, Tosso; Welle, Monika Maria (2017). A Nonsense Variant in the ST14 Gene in Akhal-Teke Horses with Naked Foal Syndrome. G3 Genes Genomes Genetics, 7(4), pp. 1315-1321. Genetics Society of America 10.1534/g3.117.039511
Neuditschko, Markus; Raadsma, Herman W; Khatkar, Mehar S; Jonas, Elisabeth; Steinig, Eike J; Flury, Christine; Signer-Hasler, Heidi; Frischknecht, Mirjam; von Niederhäusern, Ruedi; Leeb, Tosso; Rieder, Stefan (2017). Identification of key contributors in complex population structures. PLoS ONE, 12(5), e0177638. Public Library of Science 10.1371/journal.pone.0177638
Burren, A; Neuditschko, Markus; Signer-Hasler, Heidi; Frischknecht, Mirjam; Reber, Irene; Menzi, Fiona; Drögemüller, Cord; Flury, C (2016). Genetic diversity analyses reveal first insights into breed-specific selection signatures within Swiss goat breeds. Animal genetics, 47(6), pp. 727-739. Blackwell 10.1111/age.12476
Parejo, Melanie; Wragg, David; Gauthier, Laurent; Vignal, Alain; Neumann, Peter; Neuditschko, Markus (2016). Using Whole-Genome Sequence Information to Foster Conservation Efforts for the European Dark Honey Bee, Apis mellifera mellifera. Frontiers in ecology and evolution, 4(140) Frontiers Media 10.3389/fevo.2016.00140
Librado, Pablo; Der Sarkissian, Clio; Ermini, Luca; Schubert, Mikkel; Jónsson, Hákon; Albrechtsen, Anders; Fumagalli, Matteo; Yang, Melinda A.; Gamba, Cristina; Seguin-Orlando, Andaine; Mortensen, Cecilie D.; Petersen, Bent; Hoover, Cindi A.; Lorente-Galdos, Belen; Nedoluzhko, Artem; Boulygina, Eugenia; Tsygankova, Svetlana; Neuditschko, Markus; Jagannathan, Vidhya; Thèves, Catherine; ... (2015). Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 112(50), E6889-E6897. National Academy of Sciences NAS 10.1073/pnas.1513696112
Der Sarkissian, Clio; Ermini, Luca; Schubert, Mikkel; Yang, Melinda A; Librado, Pablo; Fumagalli, Matteo; Jónsson, Hákon; Bar-Gal, Gila Kahila; Albrechtsen, Anders; Vieira, Filipe G; Petersen, Bent; Ginolhac, Aurélien; Seguin-Orlando, Andaine; Magnussen, Kim; Fages, Antoine; Gamba, Cristina; Lorente-Galdos, Belen; Polani, Sagi; Steiner, Cynthia; Neuditschko, Markus; ... (2015). Evolutionary Genomics and Conservation of the Endangered Przewalski's Horse. Current Biology, 25(19), pp. 2577-2583. Cell Press 10.1016/j.cub.2015.08.032
Frischknecht, Mirjam; Jagannathan, Vidhya; Plattet, Philippe; Neuditschko, Markus; Signer-Hasler, Heidi; Bachmann, Iris; Pacholewska, Alicja Elzbieta; Drögemüller, Cord; Dietschi, Elisabeth; Flury, Christine; Rieder, Stefan; Leeb, Tosso (2015). A Non-Synonymous HMGA2 Variant Decreases Height in Shetland Ponies and Other Small Horses. PLoS ONE, 10(10), e0140749. Public Library of Science 10.1371/journal.pone.0140749
Signer-Hasler, Heidi; Neuditschko, Markus; Koch, Christoph; Froidevaux, Sylvie Marie; Flury, Christine; Burger, Dominik; Leeb, Tosso; Rieder, Stefan (2014). A chromosomal region on ECA13 is associated with maxillary prognathism in horses. PLoS ONE, 9(1), e86607. Public Library of Science 10.1371/journal.pone.0086607
Burren, Alexander; Signer-Hasler, Heidi; Neuditschko, Markus; Tetens, Jens; Kijas, James; Drögemüller, Cord; Flury, Christine (2014). Fine-scale population structure analysis of seven local Swiss sheep breeds using genome-wide SNP data. Animal genetic resources, 55, pp. 67-76. Cambridge University Press 10.1017/S2078633614000253
Frischknecht, Mirjam; Neuditschko, Markus; Jagannathan, Vidhya; Drögemüller, Cord; Tetens, Jens; Thaller, Georg; Leeb, Tosso; Rieder, Stefan (2014). Imputation of sequence level genotypes in the Franches-Montagnes horse breed. Genetics, selection, evolution, 46(1), p. 63. BioMed Central 10.1186/s12711-014-0063-7
