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Kreppke, Jan-Niklas; Cody, Robyn; Beck, Johannes; Brand, Serge; Donath, Lars; Eckert, Anne; Imboden, Christian; Hatzinger, Martin; Holsboer-Trachsler, Edith; Lang, Undine E; Mans, Sarah; Mikoteit, Thorsten; Oswald, Anja; Rogausch, Anja; Schweinfurth-Keck, Nina; Zahner, Lukas; Gerber, Markus; Faude, Oliver (2024). Cardiorespiratory fitness, perceived fitness and autonomic function in in-patients with different depression severity compared with healthy controls. Journal of psychiatric research, 175, pp. 437-445. Elsevier 10.1016/j.jpsychires.2024.05.044
Kreppke, Jan-Niklas; Cody, Robyn; Beck, Johannes; Brand, Serge; Donath, Lars; Eckert, Anne; Faude, Oliver; Hatzinger, Martin; Imboden, Christian; Lang, Undine E; Ludyga, Sebastian; Mans, Sarah; Mikoteit, Thorsten; Oswald, Anja; Schweinfurth-Keck, Nina; Holsboer-Trachsler, Edith; Zahner, Lukas; Gerber, Markus (2024). Long-term outcomes of physical activity counseling in in-patients with major depressive disorder: results from the PACINPAT randomized controlled trial. Translational psychiatry, 14(160) Nature Publishing Group 10.1038/s41398-024-02885-0
Hinojosa, Yoandry; Liniger, Matthias; Garciá-Nicolás, Obdulio; Gerber, Markus; Rajaratnam, Anojen; Muñoz-González, Sara; Coronado, Liani; Frías, María Teresa; Perera, Carmen Laura; Ganges, Llilianne; Ruggli, Nicolas (2024). Evolutionary-Related High- and Low-Virulent Classical Swine Fever Virus Isolates Reveal Viral Determinants of Virulence. Viruses, 16(1) MDPI 10.3390/v16010147
Mehinagic, Kemal; Liniger, Matthias; Samoilenko, Maksym; Soltermann, Nick; Gerber, Markus; Ruggli, Nicolas (2024). A Sensitive Luciferase Reporter Assay for the Detection of Infectious African Swine Fever Virus. Journal of virological methods, 323, p. 114854. Elsevier 10.1016/j.jviromet.2023.114854
Knappe, Florian; Filippou, Konstantinia; Hatzigeorgiadis, Antonis; Morres, Ioannis D; Tzormpatzakis, Emmanouil; Havas, Elsa; Seelig, Harald; Ludyga, Sebastian; Colledge, Flora; Meier, Marianne; Theodorakis, Yannis; von Känel, Roland; Pühse, Uwe; Gerber, Markus (2024). Effects of a co-designed exercise and sport intervention on cardiorespiratory fitness and metabolic syndrome components among individuals living in a refugee camp in Greece: A randomized controlled trial. Journal of migration and health, 9(100227) Elsevier 10.1016/j.jmh.2024.100227
Démoulins, Thomas; Techakriengkrai, Navapon; Ebensen, Thomas; Schulze, Kai; Liniger, Matthias; Gerber, Markus; Nedumpun, Teerawut; McCullough, Kenneth C; Guzmán, Carlos A; Suradhat, Sanipa; Ruggli, Nicolas (2024). New Generation Self-Replicating RNA Vaccines Derived from Pestivirus Genome. Methods in molecular biology, 2786, pp. 89-133. Springer 10.1007/978-1-0716-3770-8_4
Gerber, Markus; Filippou, Konstantinia; Knappe, Florian; Morres, Ioannis D; Tzormpatzakis, Emmanouil; Havas, Elsa; Seelig, Harald; Colledge, Flora; Ludyga, Sebastian; Meier, Marianne; Theodorakis, Yannis; von Känel, Roland; Pühse, Uwe; Hatzigeorgiadis, Antonis (2023). Associations between grip strength, cardiorespiratory fitness, cardiovascular risk and mental health in forcibly displaced people from a Greek refugee camp. Scientific reports, 13(1), p. 20970. Springer Nature 10.1038/s41598-023-48032-5
Gerber, Markus; Suppanz, Ida; Oeljeklaus, Silke; Niemann, Moritz; Käser, Sandro; Warscheid, Bettina; Schneider, André; Dewar, Caroline E (2023). A Msp1-containing complex removes orphaned proteins in the mitochondrial outer membrane of T. brucei. Life science alliance, 6(11) EMBO Press 10.26508/lsa.202302004
Démoulins, Thomas; Schulze, Kai; Ebensen, Thomas; Techakriengkrai, Navapon; Nedumpun, Teerawut; Englezou, Pavlos C; Gerber, Markus; Hlushchuk, Ruslan; Toledo, Darien; Djonov, Valentin; von Gunten, Stephan; McCullough, Kenneth C; Liniger, Matthias; Guzmán, Carlos A; Suradhat, Sanipa; Ruggli, Nicolas (2023). Coatsome-replicon vehicles: Self-replicating RNA vaccines against infectious diseases. Nanomedicine : nanotechnology, biology, and medicine, 49(102655), p. 102655. Elsevier 10.1016/j.nano.2023.102655
Knappe, Florian; Filippou, Konstantinia; Hatzigeorgiadis, Antonis; Morres, Ioannis D; Tzormpatzakis, Emmanouil; Havas, Elsa; Seelig, Harald; Colledge, Flora; Ludyga, Sebastian; Meier, Marianne; de Quervain, Dominique; Theodorakis, Yannis; von Känel, Roland; Pühse, Uwe; Gerber, Markus (2023). Psychological well-being, mental distress, metabolic syndrome, and associated factors among people living in a refugee camp in Greece: a cross-sectional study. Frontiers in Public Health, 11(1179756), p. 1179756. Frontiers Research Foundation 10.3389/fpubh.2023.1179756
Wang, Miaomiao; Bohórquez, José Alejandro; Muñoz-González, Sara; Gerber, Markus; Alberch, Mònica; Pérez-Simó, Marta; Abad, Xavier; Liniger, Matthias; Ruggli, Nicolas; Ganges, Llilianne (2022). Removal of the Erns RNase Activity and of the 3' Untranslated Region Polyuridine Insertion in a Low-Virulence Classical Swine Fever Virus Triggers a Cytokine Storm and Lethal Disease. Journal of virology, 96(14), e0043822. American Society for Microbiology 10.1128/jvi.00438-22
Wang, Miaomiao; Bohórquez, José Alejandro; Hinojosa, Yoandry; Muñoz-González, Sara; Gerber, Markus; Coronado, Liani; Perera, Carmen Laura; Liniger, Matthias; Ruggli, Nicolas; Ganges, Llilianne (2021). Abrogation of the RNase activity of Erns in a low virulence classical swine fever virus enhances the humoral immune response and reduces virulence, transmissibility, and persistence in pigs. Virulence, 12(1), pp. 2037-2049. Taylor & Francis 10.1080/21505594.2021.1959715
Démoulins, Thomas; Ruggli, Nicolas; Gerber, Markus; Thomann-Harwood, Lisa J; Ebensen, Thomas; Schulze, Kai; Guzmán, Carlos A; McCullough, Kenneth C (2021). Self-Amplifying Pestivirus Replicon RNA Encoding Influenza Virus Nucleoprotein and Hemagglutinin Promote Humoral and Cellular Immune Responses in Pigs. Frontiers in immunology, 11, p. 622385. Frontiers Research Foundation 10.3389/fimmu.2020.622385
Liniger, Matthias; Gerber, Markus; Renzullo, Sandra; Garcia-Nicolás, Obdulio; Ruggli, Nicolas (2021). TNF-Mediated Inhibition of Classical Swine Fever Virus Replication Is IRF1-, NF-κB- and JAK/STAT Signaling-Dependent. Viruses, 13(10), p. 2017. MDPI 10.3390/v13102017
Reichert, Markus; Giurgiu, Marco; Koch, Elena D.; Wieland, Lena M.; Lautenbach, Sven; Neubauer, Andreas B.; von Haaren-Mack, Birte; Schilling, Renè; Timm, Irina; Notthoff, Nanna; Marzi, Isabel; Hill, Holger; Brüßler, Sarah; Eckert, Tobias; Fiedler, Janis; Burchartz, Alexander; Anedda, Bastian; Wunsch, Kathrin; Gerber, Markus; Jekauc, Darko; ... (2020). Ambulatory assessment for physical activity research: State of the science, best practices and future directions. Psychology of sport and exercise, 50 Elsevier Science 10.1016/j.psychsport.2020.101742
Itakura, Yukari; Matsuno, Keita; Ito, Asako; Gerber, Markus; Liniger, Matthias; Fujimoto, Yuri; Tamura, Tomokazu; Kameyama, Ken-Ichiro; Okamatsu, Masatoshi; Ruggli, Nicolas; Kida, Hiroshi; Sakoda, Yoshihiro (2020). A cloned classical swine fever virus derived from the vaccine strain GPE- causes cytopathic effect in CPK-NS cells via type-I interferon-dependent necroptosis. Virus research, 276, p. 197809. Elsevier 10.1016/j.virusres.2019.197809
Wang, Miaomiao; Liniger, Matthias; Muñoz-González, Sara; Bohórquez, José Alejandro; Hinojosa, Yoandry; Gerber, Markus; López-Soria, Sergio; Rosell, Rosa; Ruggli, Nicolas; Ganges, Llilianne (2020). A Polyuridine Insertion in the 3' Untranslated Region of Classical Swine Fever Virus Activates Immunity and Reduces Viral Virulence in Piglets. Journal of virology, 94(2) American Society for Microbiology 10.1128/JVI.01214-19
Nigg, Claudio R.; Fuchs, Reinhard; Gerber, Markus; Jekauc, Darko; Koch, Theresa; Krell-Roesch, Janina; Lippke, Sonia; Mnich, Carina; Novak, Bernhard; Ju, Qianqian; Sattler, Matteo C.; Schmidt, Steffen C.E.; van Poppel, Mireille; Reimers, Anne K.; Wagner, Petra; Woods, Catherine; Woll, Alexander (2020). Assessing physical activity through questionnaires – A consensus of best practices and future directions. Psychology of sport and exercise, 50, p. 101715. Elsevier Science 10.1016/j.psychsport.2020.101715
Auray, Gael; Talker, Stephanie; Keller, Irene; Python, Sylvie; Gerber, Markus; Liniger, Matthias; Ganges, Llilianne; Bruggmann, Rémy; Ruggli, Nicolas; Summerfield, Artur (2020). High-Resolution Profiling of Innate Immune Responses by Porcine Dendritic Cell Subsets in vitro and in vivo. Frontiers in immunology, 11, p. 1429. Frontiers Research Foundation 10.3389/fimmu.2020.01429
V'kovski, Philip; Gerber, Markus; Kelly, Jenna Nicole; Pfänder, Stephanie; Ebert, Nadine; Braga Lagache, Sophie; Simillion, Cedric; Portmann, Jasmine; Stalder, Hanspeter; Gaschen, Véronique; Bruggmann, Rémy; Stoffel, Michael Hubert; Heller, Manfred; Dijkman, Ronald; Thiel, Volker Earl (2019). Determination of host proteins composing the microenvironment of coronavirus replicase complexes by proximity-labeling. eLife, 8 eLife Sciences Publications 10.7554/eLife.42037
Scheel, Troels K H; Luna, Joseph M; Liniger, Matthias; Nishiuchi, Eiko; Rozen-Gagnon, Kathryn; Shlomai, Amir; Auray, Gaël; Gerber, Markus; Fak, John; Keller, Irene; Bruggmann, Rémy; Darnell, Robert B; Ruggli, Nicolas; Rice, Charles M (2016). A Broad RNA Virus Survey Reveals Both miRNA Dependence and Functional Sequestration. Cell host & microbe, 19(3), pp. 409-423. Cell Press 10.1016/j.chom.2016.02.007
Seitz, Michael; Gerber, Markus (2013). Grossgefässvaskulitiden-«Update». Diagnostik und Therapie 2012. Swiss Medical Forum, 13(10), pp. 201-205. EMH Swiss Medical Publishers
Gerber, Markus; Joos, Fortunat (2013). An Ensemble Kalman Filter multi-tracer assimilation: Determining uncertain ocean model parameters for improved climate-carbon cycle projections. Ocean Modelling, 64, pp. 29-45. Elsevier 10.1016/j.ocemod.2012.12.012
Gruber, Nicolas; Gloor, Manuel; Mikaloff Fletcher, Sara E.; Doney, Scott C.; Dutkiewicz, Stephanie; Follows, Michael J.; Gerber, Markus; Jacobson, Andrew R.; Joos, Fortunat; Lindsay, Keith; Menemenlis, Dimitris; Mouchet, Anne; Müller, Simon A.; Sarmiento, Jorge L.; Takahashi, Taro (2009). Oceanic sources, sinks, and transport of atmospheric CO2. Global biogeochemical cycles, 23(1), n/a-n/a. Washington, D.C.: American Geophysical Union 10.1029/2008GB003349
Elfering, Achim; Brunner, Beatrice; Igic, Ivana; Keller, Anita; Weber, Lukas (2018). Gesellschaftliche Bedeutung und Kosten von Stress. In: Fuchs, Reinhard; Gerber, Markus (eds.) Handbuch Stressregulation und Sport. Springer Reference Psychologie (pp. 123-141). Berlin: Springer 10.1007/978-3-662-49322-9_6
Eggenberger, Peter; Gerber, Markus; Ulrich-Bochsler, Susi (1988). Schwarzenburg «Käppeli». Dorfkapelle. Die Ergebnisse der Bauforschung von 1987. Bern: Staatlicher Lehrmittelverlag Bern 1988
Gerber, Markus (2009). Assimilating ocean tracer data into the Bern3D model using an ensemble Kalman filter (Unpublished). (Dissertation, Universität Bern, Philosophisch–naturwissenschaftliche Fakultät, Physikalisches Institut, Abteilung für Klima– und Umweltphysik)
