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Fernbach, Sonja; Mair, Nina K; Abela, Irene A; Groen, Kevin; Kuratli, Roger; Lork, Marie; Thorball, Christian W; Bernasconi, Enos; Filippidis, Paraskevas; Leuzinger, Karoline; Notter, Julia; Rauch, Andri; Hirsch, Hans H; Huber, Michael; Günthard, Huldrych F; Fellay, Jacques; Kouyos, Roger D; Hale, Benjamin G (2024). Loss of tolerance precedes triggering and lifelong persistence of pathogenic type I interferon autoantibodies. Journal of experimental medicine, 221(9) Rockefeller University Press 10.1084/jem.20240365
Gütlin, Yukino; Albertos Torres, Diana; Gensch, Alexander; Schlotterbeck, Ann-Kathrin; Stöger, Laurent; Heller, Stefanie; Infanti, Laura; Barut, Güliz Tuba; Thiel, Volker; Leuzinger, Karoline; Hirsch, Hans H; Buser, Andreas; Egli, Adrian (2024). Anti-SARS-CoV-2 total immunoglobulin and neutralising antibody responses in healthy blood donors throughout the COVID-19 pandemic: a longitudinal observational study. Swiss medical weekly, 154(3408) SMW supporting association 10.57187/s.3408
Begré, Lorin; Boyd, Anders; Plissonnier, Marie-Laure; Testoni, Barbara; Salazar-Vizcaya, Luisa; Suter-Riniker, Franziska; Scholtès, Caroline; Béguelin, Charles; Rockstroh, Jürgen K; Günthard, Huldrych F; Calmy, Alexandra; Cavassini, Matthias; Hirsch, Hans H; Schmid, Patrick; Bernasconi, Enos; Levrero, Massimo; Wandeler, Gilles; Zoulim, Fabien; Rauch, Andri (2024). Circulating HBV RNA and hepatitis B core-related antigen trajectories in persons with HIV/HBV coinfection and HBsAg loss on tenofovir therapy. (In Press). The journal of infectious diseases Oxford University Press 10.1093/infdis/jiae189
Kusejko, Katharina; Neofytos, Dionysios; van Delden, Christian; Hirsch, Hans H; Meylan, Pascal; Boggian, Katia; Hirzel, Cedric; Garzoni, Christian; Sidler, Daniel; Schnyder, Aurelia; Schaub, Stefan; Golshayan, Déla; Haidar, Fadi; Bonani, Marco; Kouyos, Roger D; Mueller, Nicolas J; Schreiber, Peter W (2024). Do Infectious Diseases After Kidney Retransplantation Differ From Those After First Kidney Transplantation? Open Forum Infectious Diseases, 11(3) Oxford University Press 10.1093/ofid/ofae055
Manuel, Oriol; Laager, Mirjam; Hirzel, Cédric; Neofytos, Dionysios; Walti, Laura N; Hoenger, Gideon; Binet, Isabelle; Schnyder, Aurelia; Stampf, Susanne; Koller, Michael; Mombelli, Matteo; Kim, Min Jeong; Hoffmann, Matthias; Koenig, Katrin; Hess, Christoph; Burgener, Anne-Valérie; Cippà, Pietro E; Hübel, Kerstin; Mueller, Thomas F; Sidler, Daniel; ... (2024). Immune monitoring-guided vs fixed duration of antiviral prophylaxis against cytomegalovirus in solid-organ transplant recipients. A Multicenter, Randomized Clinical Trial. Clinical infectious diseases, 78(2), pp. 312-323. Oxford University Press 10.1093/cid/ciad575
Zeeb, Marius; Tepekule, Burcu; Kusejko, Katharina; Reiber, Claudine; Kälin, Marisa; Bartl, Lena; Notter, Julia; Furrer, Hansjakob; Hoffmann, Matthias; Hirsch, Hans H; Calmy, Alexandra; Cavassini, Matthias; Labhardt, Niklaus D; Bernasconi, Enos; Braun, Dominique L; Günthard, Huldrych F; Kouyos, Roger D; Nemeth, Johannes (2023). Understanding the decline of incident, active tuberculosis in people with HIV in Switzerland. Clinical infectious diseases, 77(9), pp. 1303-1311. Oxford University Press 10.1093/cid/ciad330
Neves, Aitana; Walther, Daniel; Martin-Campos, Trinidad; Barbie, Valerie; Bertelli, Claire; Blanc, Dominique; Bouchet, Gérard; Erard, Frédéric; Greub, Gilbert; Hirsch, Hans H; Huber, Michael; Kaiser, Laurent; Leib, Stephen L; Leuzinger, Karoline; Lazarevic, Vladimir; Mäusezahl, Mirjam; Molina, Jorge; Neher, Richard A; Perreten, Vincent; Ramette, Alban; ... (2023). The Swiss Pathogen Surveillance Platform - towards a nation-wide One Health data exchange platform for bacterial, viral and fungal genomics and associated metadata. Microbial genomics, 9(5) Microbiology Society 10.1099/mgen.0.001001
Walti, Laura N; Mugglin, Catrina; Mombelli, Matteo; Manuel, Oriol; Hirsch, Hans H; Khanna, Nina; Mueller, Nicolas J; Berger, Christoph; Boggian, Katia; Garzoni, Christian; Neofytos, Dionysios; van Delden, Christian; Mäusezahl, Mirjam; Hirzel, Cédric (2023). Vaccine-Preventable Infections Among Solid Organ Transplant Recipients in Switzerland. JAMA Network Open, 6(4), e2310687. American Medical Association 10.1001/jamanetworkopen.2023.10687
Balakrishna, Suraj; Loosli, Tom; Zaheri, Maryam; Frischknecht, Paul; Huber, Michael; Kusejko, Katharina; Yerly, Sabine; Leuzinger, Karoline; Perreau, Matthieu; Ramette, Alban; Wymant, Chris; Fraser, Christophe; Kellam, Paul; Gall, Astrid; Hirsch, Hans H; Stoeckle, Marcel; Rauch, Andri; Cavassini, Matthias; Bernasconi, Enos; Notter, Julia; ... (2023). Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1. The journal of antimicrobial chemotherapy, 78(3), pp. 656-664. Oxford University Press 10.1093/jac/dkac430
Labarile, Marco; Loosli, Tom; Zeeb, Marius; Kusejko, Katharina; Huber, Michael; Hirsch, Hans H; Perreau, Matthieu; Ramette, Alban; Yerly, Sabine; Cavassini, Matthias; Battegay, Manuel; Rauch, Andri; Calmy, Alexandra; Notter, Julia; Bernasconi, Enos; Fux, Christoph; Günthard, Huldrych F; Pasin, Chloé; Kouyos, Roger D (2023). Quantifying and predicting ongoing Human Immunodeficiency Virus Type 1 (HIV-1) transmission dynamics in Switzerland using a distance-based clustering approach. The journal of infectious diseases, 227(4), pp. 554-564. Oxford University Press 10.1093/infdis/jiac457
Nadeau, Sarah A; Vaughan, Timothy G; Beckmann, Christiane; Topolsky, Ivan; Chen, Chaoran; Hodcroft, Emma; Schär, Tobias; Nissen, Ina; Santacroce, Natascha; Burcklen, Elodie; Ferreira, Pedro; Jablonski, Kim Philipp; Posada-Céspedes, Susana; Capece, Vincenzo; Seidel, Sophie; Santamaria de Souza, Noemi; Martinez-Gomez, Julia M; Cheng, Phil; Bosshard, Philipp P; Levesque, Mitchell P; ... (2023). Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data. Science translational medicine, 15(680), eabn7979. American Association for the Advancement of Science 10.1126/scitranslmed.abn7979
Chaudron, Sandra E; Leemann, Christine; Kusejko, Katharina; Nguyen, Huyen; Tschumi, Nadine; Marzel, Alex; Huber, Michael; Böni, Jürg; Perreau, Matthieu; Klimkait, Thomas; Yerly, Sabine; Ramette, Alban; Hirsch, Hans H; Rauch, Andri; Calmy, Alexandra; Vernazza, Pietro; Bernasconi, Enos; Cavassini, Matthias; Metzner, Karin J; Kouyos, Roger D; ... (2022). A systematic molecular epidemiology screen reveals numerous HIV-1 superinfections in the Swiss HIV Cohort Study. The journal of infectious diseases, 226(7), pp. 1256-1266. Oxford University Press 10.1093/infdis/jiac166
Hirzel, Cédric; Projer, Lea; Atkinson, Andrew; Surial, Bernard; Mueller, Nicolas J; Manuel, Oriol; Mombelli, Matteo; van Delden, Christian; Hirsch, Hans H; Boggian, Katia; Walti, Laura N; Sidler, Daniel; Hadaya, Karine; Dickenmann, Michael; Müller, Thomas F; Binet, Isabelle; Golshayan, Déla; Huynh-Do, Uyen (2022). Infection Risk in the First Year After ABO-incompatible Kidney Transplantation: A Nationwide Prospective Cohort Study. Transplantation, 106(9), pp. 1875-1883. Wolters Kluwer Health 10.1097/TP.0000000000004109
Nadeau, Sarah; Thorball, Christian W; Kouyos, Roger; Günthard, Huldrych F; Böni, Jürg; Yerly, Sabine; Perreau, Matthieu; Klimkait, Thomas; Rauch, Andri; Hirsch, Hans H; Cavassini, Matthias; Vernazza, Pietro; Bernasconi, Enos; Fellay, Jacques; Mitov, Venelin; Stadler, Tanja (2022). A phylogeny-aware GWAS framework to correct for heritable pathogen effects on infectious disease traits. Molecular Biology and Evolution, 39(8) Oxford University Press 10.1093/molbev/msac163
Wegner, Fanny; Roloff, Tim; Huber, Michael; Cordey, Samuel; Ramette, Alban; Gerth, Yannick; Bertelli, Claire; Stange, Madlen; Seth-Smith, Helena M B; Mari, Alfredo; Leuzinger, Karoline; Cerutti, Lorenzo; Harshman, Keith; Xenarios, Ioannis; Le Mercier, Philippe; Bittel, Pascal; Neuenschwander, Stefan; Opota, Onya; Fuchs, Jonas; Panning, Marcus; ... (2022). External quality assessment of SARS-CoV-2-sequencing: An ESGMD-SSM pilot trial across 15 European laboratories. Journal of clinical microbiology, 60(1), e0169821. American Society for Microbiology 10.1128/JCM.01698-21
Duran Ramirez, Jessy J; Ballouz, Tala; Nguyen, Huyen; Kusejko, Katharina; Chaudron, Sandra E; Huber, Michael; Hirsch, Hans H; Perreau, Matthieu; Ramette, Alban; Yerly, Sabine; Cavassini, Matthias; Stöckle, Marcel; Furrer, Hansjakob; Vernazza, Pietro; Bernasconi, Enos; Günthard, Huldrych F; Kouyos, Roger D (2022). Increasing Frequency and Transmission of HIV-1 Non-B Subtypes among Men Who Have Sex with Men in the Swiss HIV Cohort Study. The journal of infectious diseases, 225(2), pp. 306-316. Oxford University Press 10.1093/infdis/jiab360
Speich, Benjamin; Chammartin, Frédérique; Smith, Daniel; Stoeckle, Marcel P; Amico, Patrizia; Eichenberger, Anna L; Hasse, Barbara; Schuurmans, Macé M; Müller, Thomas; Tamm, Michael; Dickenmann, Michael; Abela, Irene A; Trkola, Alexandra; Hirsch, Hans H; Manuel, Oriol; Cavassini, Matthias; Hemkens, Lars G; Briel, Matthias; Mueller, Nicolas J; Rauch, Andri; ... (2021). A trial platform to assess approved SARS-CoV-2 vaccines in immunocompromised patients: first sub-protocol for a pilot trial comparing the mRNA vaccines Comirnaty® and COVID-19 mRNA Vaccine Moderna®. Trials, 22(1), p. 724. BioMed Central 10.1186/s13063-021-05664-0
Kusejko, Katharina; Neofytos, Dionysios; Hirsch, Hans H; Meylan, Pascal; Boggian, Katia; Hirzel, Cédric; Garzoni, Christian; Kouyos, Roger D; Mueller, Nicolas J; Schreiber, Peter W (2021). Differences between infectious disease events in first liver transplant versus re-transplantation in the Swiss Transplant Cohort Study. Liver transplantation, 27(9), pp. 1283-1290. Wiley 10.1002/lt.26068
Nguyen, Huyen; Thorball, Christian Wandell; Fellay, Jacques; Böni, Jürg; Yerly, Sabine; Perreau, Matthieu; Hirsch, Hans H; Kusejko, Katharina; Thurnheer, Maria Christine; Battegay, Manuel; Cavassini, Matthias; Kahlert, Christian R; Bernasconi, Enos; Günthard, Huldrych F; Kouyos, Roger D (2021). Systematic screening of viral and human genetic variation identifies antiretroviral resistance and immune escape link. eLife, 10 eLife Sciences Publications 10.7554/eLife.67388
Mari, Alfredo; Roloff, Tim; Stange, Madlen; Søgaard, Kirstine K; Asllanaj, Erblin; Tauriello, Gerardo; Alexander, Leila Tamara; Schweitzer, Michael; Leuzinger, Karoline; Gensch, Alexander; Martinez, Aurélien E; Bielicki, Julia; Pargger, Hans; Siegemund, Martin; Nickel, Christian H; Bingisser, Roland; Osthoff, Michael; Bassetti, Stefano; Sendi, Parham; Battegay, Manuel; ... (2021). Global Genomic Analysis of SARS-CoV-2 RNA Dependent RNA Polymerase Evolution and Antiviral Drug Resistance. Microorganisms, 9(5) MDPI 10.3390/microorganisms9051094
Mombelli, Matteo; Lang, Brian M; Neofytos, Dionysios; Aubert, John-David; Benden, Christian; Berger, Christoph; Boggian, Katia; Egli, Adrian; Soccal, Paola M; Kaiser, Laurent; Hirzel, Cédric; Pascual, Manuel; Koller, Michael; Mueller, Nicolas J; van Delden, Christian; Hirsch, Hans H; Manuel, Oriol (2021). Burden, epidemiology, and outcomes of microbiologically confirmed respiratory viral infections in solid organ transplant recipients: a nationwide, multi-season prospective cohort study. American journal of transplantation, 21(5), pp. 1789-1800. Wiley-Blackwell 10.1111/ajt.16383
Goncalves Cabecinhas, Ana Rita; Roloff, Tim; Stange, Madlen; Bertelli, Claire; Huber, Michael; Ramette, Alban; Chen, Chaoran; Nadeau, Sarah; Gerth, Yannick; Yerly, Sabine; Opota, Onya; Pillonel, Trestan; Schuster, Tobias; Metzger, Cesar M J A; Sieber, Jonas; Bel, Michael; Wohlwend, Nadia; Baumann, Christian; Koch, Michel C.; Bittel, Pascal; ... (2021). SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021-Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing. Microorganisms, 9(4), p. 677. MDPI 10.3390/microorganisms9040677
van Delden, Christian; Stampf, Susanne; Hirsch, Hans H; Manuel, Oriol; Meylan, Pascal; Cusini, Alexia; Hirzel, Cédric; Khanna, Nina; Weisser, Maja; Garzoni, Christian; Boggian, Katja; Berger, Christoph; Nadal, David; Koller, Michael; Saccilotto, Ramon; Mueller, Nicolas J (2020). Burden and Timeline of Infectious Diseases in the First Year After Solid Organ Transplantation in the Swiss Transplant Cohort Study. Clinical infectious diseases, 71(7), e159-e169. Oxford University Press 10.1093/cid/ciz1113
Tschopp, Jonathan; L'Huillier, Arnaud G; Mombelli, Matteo; Mueller, Nicolas J; Khanna, Nina; Garzoni, Christian; Meloni, Dario; Papadimitriou-Olivgeris, Matthaios; Neofytos, Dionysios; Hirsch, Hans H; Schuurmans, Macé M; Müller, Thomas; Berney, Thierry; Steiger, Jürg; Pascual, Manuel; Manuel, Oriol; van Delden, Christian (2020). First experience of SARS-CoV-2 infections in solid organ transplant recipients in the Swiss Transplant Cohort Study. American journal of transplantation, 20(10), pp. 2876-2882. Wiley-Blackwell 10.1111/ajt.16062
Marzolini, Catia; Stader, Felix; Stoeckle, Marcel; Franzeck, Fabian; Egli, Adrian; Bassetti, Stefano; Hollinger, Alexa; Osthoff, Michael; Weisser, Maja; Gebhard, Caroline E; Baettig, Veronika; Geenen, Julia; Khanna, Nina; Tschudin-Sutter, Sarah; Mueller, Daniel; Hirsch, Hans H; Battegay, Manuel; Sendi, Parham (2020). Effect of Systemic Inflammatory Response to SARS-CoV-2 on Lopinavir and Hydroxychloroquine Plasma Concentrations. Antimicrobial agents and chemotherapy, 64(9) American Society for Microbiology 10.1128/AAC.01177-20
Combes, Jean-Damien; Clifford, Gary M; Günthard, Huldrych F; Hauser, Christoph; Darling, Katharine E A; Valladares, Pablo; Battegay, Manuel; Waldeck, Frederike; Bernasconi, Enos; Bertisch, Barbara; Hirsch, Hans H; Brenner, Nicole; Waterboer, Tim; Scherrer, Alexandra U (2020). Antibodies against HPV16E6 oncoprotein in the Swiss HIV Cohort Study: kinetics and anal cancer risk prediction. International journal of cancer, 147(3), pp. 757-765. Wiley-Blackwell 10.1002/ijc.32784
Schreiber, Peter W; Kusejko, Katharina; Bischoff-Ferrari, Heike A; Boggian, Katia; Bonani, Marco; van Delden, Christian; Enriquez, Natalia; Fehr, Thomas; Garzoni, Christian; Hirsch, Hans H; Hirzel, Cédric; Manuel, Oriol; Meylan, Pascal; Saleh, Lanja; Weisser, Maja; Mueller, Nicolas J (2020). Vitamin D deficiency is common in kidney transplant recipients, but is not associated with infections after transplantation. Clinical transplantation, 34(2), e13778. Wiley-Blackwell 10.1111/ctr.13778
Abela, Irene A; Scherrer, Alexandra U; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Perreau, Matthieu; Hirsch, Hans H; Furrer, Hansjakob; Calmy, Alexandra; Schmid, Patrick; Cavassini, Matthias; Bernasconi, Enos; Günthard, Huldrych F (2020). Emergence of drug resistance in the Swiss HIV Cohort Study under potent antiretroviral therapy is observed in socially disadvantaged patients. Clinical infectious diseases, 70(2), pp. 297-303. Oxford University Press 10.1093/cid/ciz178
Compagno, Francesca; Naegele, Klaudia; Kahlert, Christian R; Hösli, Irene; Aebi-Popp, Karoline; Martinez de Tejada, Begona; Paioni, Paolo; Yerly, Sabine; Böni, Jürg; Battegay, Manuel; Rudin, Christoph; Hirsch, Hans H (2019). The rate of mother-to-child transmission of antiretroviral drug-resistant HIV strains is low in the Swiss Mother and Child HIV Cohort Study. Swiss medical weekly, 149(w20059), w20059. EMH Schweizerischer Ärzteverlag 10.4414/smw.2019.20059
Schreiber, Peter W; Bischoff-Ferrari, Heike A; Boggian, Katia; van Delden, Christian; Enriquez, Natalia; Fehr, Thomas; Garzoni, Christian; Hirsch, Hans H; Hirzel, Cédric; Manuel, Oriol; Meylan, Pascal; Saleh, Lanja; Weisser, Maja; Mueller, Nicolas J (2019). Vitamin D status and risk of infections after liver transplantation in the Swiss Transplant Cohort Study. Transplant international, 32(1), pp. 49-58. Wiley-Blackwell 10.1111/tri.13328
Schreiber, Peter W; Bischoff-Ferrari, Heike A; Boggian, Katia; Bonani, Marco; van Delden, Christian; Enriquez, Natalia; Fehr, Thomas; Garzoni, Christian; Hirsch, Hans H; Hirzel, Cédric; Manuel, Oriol; Meylan, Pascal; Saleh, Lanja; Weisser, Maja; Mueller, Nicolas J (2018). Bone metabolism dynamics in the early post-transplant period following kidney and liver transplantation. PLoS ONE, 13(1), e0191167. Public Library of Science 10.1371/journal.pone.0191167
Leboeuf, Céline; Wilk, Sabrina; Achermann, Rita; Binet, Isabelle; Golshayan, Dela; Hadaya, Karin; Hirzel, Cédric; Hoffmann, Matthias; Huynh-Do, Uyen; Koller, Michael T; Manuel, Oriol; Mueller, Nicolas J; Mueller, Thomas F; Schaub, Stefan; van Delden, Christian; Weissbach, Fabian H; Beldi, Guido; Banz Wüthrich, Vanessa; Stirnimann, Guido; Hirsch, Hans H; ... (2017). BK polyomavirus-specific 9mer CD8 T-cell responses correlate with clearance of BK viremia in kidney transplant recipients: First report from the Swiss Transplant Cohort Study (STCS). American journal of transplantation, 17(10), pp. 2591-2600. Wiley-Blackwell 10.1111/ajt.14282
Martin-Gandul, Cecilia; Stampf, Susanne; Héquet, Delphine; Mueller, Nicolas J; Cusini, Alexia; van Delden, Christian; Khanna, Nina; Boggian, Katia; Hirzel, Cédric; Soccal, Paola; Hirsch, Hans H; Pascual, Manuel; Meylan, Pascal; Beldi, Guido; Huynh-Do, Uyen; Stirnimann, Guido; Manuel, Oriol; Swiss Transplant Cohort Study, (STCS) (2017). Preventive strategies against cytomegalovirus and incidence of α-herpesvirus infections in olid-organ transplant recipients: A nationwide cohort study. American journal of transplantation, 17(7), pp. 1813-1822. Wiley-Blackwell 10.1111/ajt.14192
Combes, Jean-Damien; Clifford, Gary M; Egger, Matthias; Cavassini, Matthias; Hirsch, Hans H; Hauser, Christoph; Calmy, Alexandra; Schmid, Patrick; Bernasconi, Enos; Günthard, Huldrych F; Franceschi, Silvia; Waterboer, Tim; Scherrer, Alexandra U; Swiss HIV Cohort, Study (2017). Human papillomavirus antibody response following HAART initiation among MSM. AIDS, 31(4), pp. 561-569. Lippincott Williams & Wilkins 10.1097/QAD.0000000000001354
Shilaih, Mohaned; Marzel, Alex; Yang, Wan Lin; Scherrer, Alexandra U; Schüpbach, Jörg; Böni, Jürg; Yerly, Sabine; Hirsch, Hans H; Aubert, Vincent; Cavassini, Matthias; Klimkait, Thomas; Vernazza, Pietro L; Bernasconi, Enos; Furrer, Hansjakob; Günthard, Huldrych F; Kouyos, Roger (2016). Genotypic Resistance Tests Sequences Reveal the Role of Marginalized Populations in HIV-1 Transmission in Switzerland. Scientific Reports, 6(27580), p. 27580. Nature Publishing Group 10.1038/srep27580
Berger, Christoph; Bochud, Pierre-Yves; Boggian, Katja; Cusini, Alexia; Egli, Adrian; Garzoni, Christian; Hirsch, Hans H; Hoffmann, Matthias; Khanna, Nina; Manuel, Oriol; Meylan, Pascal; Nadal, David; van Delden, Christian; Weisser, Maja; Mueller, Nicolas J (2015). The swiss transplant cohort study: lessons from the first 6 years. Current infectious disease reports, 17(6), p. 486. Current Science 10.1007/s11908-015-0486-5
Kurmann, Rebekka; Weisstanner, Christian; Kardas, Piotr; Hirsch, Hans H; Wiest, Roland; Lämmle, Bernhard; Furrer, Hansjakob; Du Pasquier, Renaud; Bassetti, Claudio; Sturzenegger, Matthias; Krestel, Heinz Eric (2015). Progressive multifocal leukoencephalopathy in common variable immunodeficiency: mitigated course under mirtazapine and mefloquine. Journal of neurovirology, 21(6), pp. 694-701. Springer 10.1007/s13365-015-0340-4
Meyer, Sara C.; Medinger, Michael; Halter, Jörg P; Baldomero, Helen; Hirsch, Hans H; Tzankov, Alexandar; Dirnhofer, Stephan; Passweg, Jakob R; Tichelli, André (2014). Heterogeneity in clinical course of EBV-associated lymphoproliferative disorder after allogeneic stem cell transplantation. Hematology, 19(5), pp. 280-285. Taylor & Francis 10.1179/1607845413Y.0000000123
Manuel, Oriol; Wójtowicz, Agnieszka; Bibert, Stéphanie; Mueller, Nicolas J; van Delden, Christian; Hirsch, Hans H; Steiger, Juerg; Stern, Martin; Egli, Adrian; Garzoni, Christian; Binet, Isabelle; Weisser, Maja; Berger, Christoph; Cusini, Alexia; Meylan, Pascal; Pascual, Manuel; Bochud, Pierre-Yves; Swiss Transplant, Cohort Study; Huynh-Do, Uyen (2014). Influence of IFNL3/4 polymorphisms on the incidence of cytomegalovirus infection after solid-organ transplantation. Journal of infectious diseases, 211(6), pp. 906-914. Oxford University Press 10.1093/infdis/jiu557
Egli, Adrian; Schäfer, Juliane; Osthoff, Michael; Thiel, Steffen; Mikkelsen, Christina; Rauch, Andri; Hirsch, Hans H; Bucher, Heiner C; Young, James; Jensenius, Jens C; Battegay, Manuel; Trendelenburg, Marten; Swiss HIV Cohort Study, (2012). Low levels of mannan-binding lectin or ficolins are not associated with an increased risk of cytomegalovirus disease in HIV-infected patients. PLoS ONE, 8(1), e51983. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0051983
Fehr, Jan; Glass, Tracy R; Louvel, Séverine; Hamy, François; Hirsch, Hans H; von Wyl, Viktor; Böni, Jürg; Yerly, Sabine; Bürgisser, Philippe; Cavassini, Matthias; Fux, Christoph A; Hirschel, Bernard; Vernazza, Pietro; Martinetti, Gladys; Bernasconi, Enos; Günthard, Huldrych F; Battegay, Manuel; Bucher, Heiner C; Klimkait, Thomas and Swiss HIV Cohort Study, (2011). Replicative phenotyping adds value to genotypic resistance testing in heavily pre-treated HIV-infected individuals--the Swiss HIV Cohort Study. Journal of translational medicine, 9, p. 14. London: BioMed Central 10.1186/1479-5876-9-14
Khanna, Nina; Elzi, Luigia; Mueller, Nicolas J; Garzoni, Christian; Cavassini, Matthias; Fux, Christoph A; Vernazza, Pietro; Bernasconi, Enos; Battegay, Manuel; Hirsch, Hans H (2009). Incidence and outcome of progressive multifocal leukoencephalopathy over 20 years of the Swiss HIV Cohort Study. Clinical infectious diseases, 48(10), pp. 1459-66. Cary, N.C.: The University of Chicago Press 10.1086/598335
Khanna, Nina; Wolbers, Marcel; Mueller, Nicolas J; Garzoni, Christian; Du Pasquier, Renaud A; Fux, Christoph A; Vernazza, Pietro; Bernasconi, Enos; Viscidi, Raphael; Battegay, Manuel; Hirsch, Hans H (2009). JC virus-specific immune responses in human immunodeficiency virus type 1 patients with progressive multifocal leukoencephalopathy. Journal of virology, 83(9), pp. 4404-11. Baltimore: American Society for Microbiology 10.1128/JVI.02657-08
El Amari, Emmanuelle Boffi; Toutous-Trellu, Laurence; Gayet-Ageron, Angèle; Baumann, Michele; Cathomas, Gieri; Steffen, Ingrid; Erb, Peter; Mueller, Nicolas J; Furrer, Hansjakob; Cavassini, Matthias; Vernazza, Pietro; Hirsch, Hans H; Bernasconi, Enos; Hirschel, Bernard (2008). Predicting the evolution of Kaposi sarcoma, in the highly active antiretroviral therapy era. AIDS, 22(9), pp. 1019-28. Hagerstown, Md.: Lippincott Williams & Wilkins
Keiser, Olivia; Fellay, Jacques; Opravil, Milos; Hirsch, Hans H; Hirschel, Bernard; Bernasconi, Enos; Vernazza, Pietro L; Rickenbach, Martin; Telenti, Amalio; Furrer, Hansjakob (2007). Adverse events to antiretrovirals in the Swiss HIV Cohort Study: effect on mortality and treatment modification. Antiviral therapy, 12(8), pp. 1157-64. London: International Medical Press
