Krause, Johannes

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Number of items: 40.

Journal Article

Bergström, Anders; Stanton, David W G; Taron, Ulrike H; Frantz, Laurent; Sinding, Mikkel-Holger S; Ersmark, Erik; Pfrengle, Saskia; Cassatt-Johnstone, Molly; Lebrasseur, Ophélie; Girdland-Flink, Linus; Fernandes, Daniel M; Ollivier, Morgane; Speidel, Leo; Gopalakrishnan, Shyam; Westbury, Michael V; Ramos-Madrigal, Jazmin; Feuerborn, Tatiana R; Reiter, Ella; Gretzinger, Joscha; Münzel, Susanne C; ... (2022). Grey wolf genomic history reveals a dual ancestry of dogs. Nature, 607(7918), pp. 313-320. Springer Nature 10.1038/s41586-022-04824-9

Suchan, Tomasz; Kusliy, Mariya A.; Khan, Naveed; Chauvey, Loreleï; Tonasso‐Calvière, Laure; Schiavinato, Stéphanie; Southon, John; Keller, Marcel; Kitagawa, Keiko; Krause, Johannes; Bessudnov, Alexander N.; Bessudnov, Alexander A.; Graphodatsky, Alexander S.; Valenzuela‐Lamas, Silvia; Wilczyński, Jarosław; Pospuła, Sylwia; Tunia, Krzysztof; Nowak, Marek; Moskal‐delHoyo, Magdalena; Tishkin, Alexey A.; ... (2022). Performance and automation of ancient DNA capture with RNA hyRAD probes. Molecular ecology resources, 22(3), pp. 891-907. Wiley 10.1111/1755-0998.13518

Ramstein, Marianne; Steuri, Noah; Brönnimann, David; Rentzel, Philippe; Cornelissen, Marcel; Schimmelpfennig, Dirk; Anselmetti, Flavio S; Häberle, Simone; Vandorpe, Patricia; Siebke, Inga; Furtwängler, Anja; Szidat, Sönke; Hafner, Albert; Krause, Johannes; Lösch, Sandra (2022). The well-preserved Late Neolithic dolmen burial of Oberbipp, Switzerland. Construction, use, and post-depositional processes. Journal of Archaeological Science: Reports, 42, p. 103397. Elsevier 10.1016/j.jasrep.2022.103397

Kocher, Arthur; Papac, Luka; Barquera, Rodrigo; Key, Felix M; Spyrou, Maria A; Hübler, Ron; Rohrlach, Adam B; Aron, Franziska; Stahl, Raphaela; Wissgott, Antje; van Bömmel, Florian; Pfefferkorn, Maria; Mittnik, Alissa; Villalba-Mouco, Vanessa; Neumann, Gunnar U; Rivollat, Maïté; van de Loosdrecht, Marieke S; Majander, Kerttu; Tukhbatova, Rezeda I; Musralina, Lyazzat; ... (2021). Ten millennia of hepatitis B virus evolution. Science, 374(6564), pp. 182-188. American Association for the Advancement of Science 10.1126/science.abi5658

Ingman, Tara; Eisenmann, Stefanie; Skourtanioti, Eirini; Akar, Murat; Ilgner, Jana; Gnecchi Ruscone, Guido Alberto; le Roux, Petrus; Shafiq, Rula; Neumann, Gunnar U.; Keller, Marcel; Freund, Cäcilia; Marzo, Sara; Lucas, Mary; Krause, Johannes; Roberts, Patrick; Yener, K. Aslıhan; Stockhammer, Philipp W. (2021). Human mobility at Tell Atchana (Alalakh), Hatay, Turkey during the 2nd millennium BC: Integration of isotopic and genomic evidence. PLOS ONE, 16(6), e0241883. 10.1371/journal.pone.0241883

Lösch, Sandra; Ramstein, Marianne; Hafner, Albert; Krause, Johannes (2021). Oberbipp - Ein neolithischer Dolmen im Oberaargau, die Toten und was wir über sie wissen. as. Archäologie Schweiz / Archéologie Suisse / Archeologia Svizzera, 44(1), pp. 4-15. Archäologie Schweiz

Librado, Pablo; Khan, Naveed; Fages, Antoine; Kusliy, Mariya A.; Suchan, Tomasz; Tonasso-Calvière, Laure; Schiavinato, Stéphanie; Alioglu, Duha; Fromentier, Aurore; Perdereau, Aude; Aury, Jean-Marc; Gaunitz, Charleen; Chauvey, Lorelei; Seguin-Orlando, Andaine; Der Sarkissian, Clio; Southon, John; Shapiro, Beth; Tishkin, Alexey A.; Kovalev, Alexey A.; Alquraishi, Saleh; ... (2021). The origins and spread of domestic horses from the Western Eurasian steppes. Nature, 598(7882), pp. 634-640. Springer Nature 10.1038/s41586-021-04018-9

Pfrengle, Saskia; Neukamm, Judith; Guellil, Meriam; Keller, Marcel; Molak, Martyna; Avanzi, Charlotte; Kushniarevich, Alena; Montes, Núria; Neumann, Gunnar U.; Reiter, Ella; Tukhbatova, Rezeda I.; Berezina, Nataliya Y.; Buzhilova, Alexandra P.; Korobov, Dmitry S.; Suppersberger Hamre, Stian; Matos, Vitor M. J.; Ferreira, Maria T.; González-Garrido, Laura; Wasterlain, Sofia N.; Lopes, Célia; ... (2021). Mycobacterium leprae diversity and population dynamics in medieval Europe from novel ancient genomes. BMC biology, 19(1), p. 220. BioMed Central 10.1186/s12915-021-01120-2

Furtwängler, Anja; Rohrlach, A. B.; Lamnidis, Thiseas C.; Papac, Luka; Neumann, Gunnar U.; Siebke, Inga; Reiter, Ella; Steuri, Noah; Hald, Jürgen; Denaire, Anthony; Schnitzler, Bernadette; Wahl, Joachim; Ramstein, Marianne; Schuenemann, Verena J.; Stockhammer, Philipp W.; Hafner, Albert; Lösch, Sandra; Haak, Wolfgang; Schiffels, Stephan and Krause, Johannes (2020). Author Correction: Ancient genomes reveal social and genetic structure of Late Neolithic Switzerland. Nature Communications, 11(1), pp. 1-2. Springer Nature 10.1038/s41467-020-18561-y

Siebke, Inga; Furtwängler, Anja; Steuri, Noah; Hafner, Albert; Ramstein, Marianne; Krause, Johannes; Lösch, Sandra (2020). Crops vs. animals: regional differences in subsistence strategies of Swiss Neolithic farmers revealed by stable isotopes. Archaeological and anthropological sciences, 12(10) Springer 10.1007/s12520-020-01122-1

Lösch, Sandra; Siebke, Inga; Furtwängler, Anja; Steuri, Noah; Hafner, Albert; Szidat, Sönke; Krause, Johannes (2020). Bioarchäologische Untersuchungen der Knochen aus dem Dolmen von Oberbipp, Steingasse. Archäologie Bern - Jahrbuch des Archäologischen Dienstes des Kantons Bern, 2020, pp. 202-230. Bern: Rub Media

Furtwängler, Anja; Rohrlach, A. B.; Lamnidis, Thiseas C.; Papac, Luka; Neumann, Gunnar U.; Siebke, Inga; Reiter, Ella; Steuri, Noah; Hald, Jürgen; Denaire, Anthony; Schnitzler, Bernadette; Wahl, Joachim; Ramstein, Marianne; Schuenemann, Verena J.; Stockhammer, Philipp W.; Hafner, Albert; Lösch, Sandra; Haak, Wolfgang; Schiffels, Stephan and Krause, Johannes (2020). Ancient genomes reveal social and genetic structure of Late Neolithic Switzerland. Nature Communications, 11(1), p. 1915. 10.1038/s41467-020-15560-x

Key, Felix M; Posth, Cosimo; Esquivel-Gomez, Luis R; Hübler, Ron; Spyrou, Maria A; Neumann, Gunnar U; Furtwängler, Anja; Sabin, Susanna; Burri, Marta; Wissgott, Antje; Lankapalli, Aditya Kumar; Vågene, Åshild J; Meyer, Matthias; Nagel, Sarah; Tukhbatova, Rezeda; Khokhlov, Aleksandr; Chizhevsky, Andrey; Hansen, Svend; Belinsky, Andrey B; Kalmykov, Alexey; ... (2020). Emergence of human-adapted Salmonella enterica is linked to the Neolithization process. Nature ecology & evolution, 4(3), pp. 324-333. Nature Publishing Group 10.1038/s41559-020-1106-9

Steuri, Noah; Siebke, Inga; Furtwängler, Anja; Szidat, Sönke; Krause, Johannes; Lösch, Sandra; Hafner, Albert (2019). Multiple radiocarbon dating of human remains: clarifying the chronology and sequences of burials in the late Neolithic dolmen of Oberbipp (Switzerland). Radiocarbon, 61(6), pp. 1697-1709. Arizona Board of Regents, University of Arizona 10.1017/RDC.2019.96

Spyrou, Maria A; Keller, Marcel; Tukhbatova, Rezeda I; Scheib, Christiana L; Nelson, Elizabeth A; Andrades Valtueña, Aida; Neumann, Gunnar U; Walker, Don; Alterauge, Amelie; Carty, Niamh; Cessford, Craig; Fetz, Hermann; Gourvennec, Michaël; Hartle, Robert; Henderson, Michael; von Heyking, Kristin; Inskip, Sarah A; Kacki, Sacha; Key, Felix M; Knox, Elizabeth L; ... (2019). Phylogeography of the second plague pandemic revealed through analysis of historical Yersinia pestis genomes. Nature communications, 10(1), p. 4470. Springer Nature 10.1038/s41467-019-12154-0

Keller, Marcel; Spyrou, Maria A.; Scheib, Christiana L.; Neumann, Gunnar U.; Kröpelin, Andreas; Haas-Gebhard, Brigitte; Päffgen, Bernd; Haberstroh, Jochen; Ribera i Lacomba, Albert; Raynaud, Claude; Cessford, Craig; Durand, Raphaël; Stadler, Peter; Nägele, Kathrin; Bates, Jessica S.; Trautmann, Bernd; Inskip, Sarah A.; Peters, Joris; Robb, John E.; Kivisild, Toomas; ... (2019). Ancient Yersinia pestis genomes from across Western Europe reveal early diversification during the First Pandemic (541–750). Proceedings of the National Academy of Sciences of the United States of America - PNAS, 116(25), pp. 12363-12372. National Academy of Sciences NAS 10.1073/pnas.1820447116

Siebke, Inga; Steuri, Noah; Furtwängler, Anja; Ramstein, Marianne; Arenz, Gabriele; Hafner, Albert; Krause, Johannes; Lösch, Sandra (2019). Who lived on the Swiss Plateau around 3300 BCE? Analyses of commingled human skeletal remains from the dolmen of Oberbipp. International journal of osteoarchaeology, 29(5), pp. 786-796. John Wiley & Sons 10.1002/oa.2791

Furtwängler, Anja; Reiter, Ella; Neumann, Gunnar U; Siebke, Inga; Steuri, Noah; Hafner, Albert; Lösch, Sandra; Anthes, Nils; Schuenemann, Verena J; Krause, Johannes (2018). Ratio of mitochondrial to nuclear DNA affects contamination estimates in ancient DNA analysis. Scientific Reports, 8(1), p. 14075. Nature Publishing Group 10.1038/s41598-018-32083-0

Krause-Kyora, Ben; Susat, Julian; Key, Felix M; Kühnert, Denise; Bosse, Esther; Immel, Alexander; Rinne, Christoph; Kornell, Sabin-Christin; Yepes, Diego; Franzenburg, Sören; Heyne, Henrike O; Meier, Thomas; Lösch, Sandra; Meller, Harald; Friederich, Susanne; Nicklisch, Nicole; Alt, Kurt W; Schreiber, Stefan; Tholey, Andreas; Herbig, Alexander; ... (2018). Neolithic and Medieval virus genomes reveal complex evolution of Hepatitis B. eLife, 7 eLife Sciences Publications 10.7554/eLife.36666

Keller, Marcel; Krause, Johannes (2017). Paleomicrobiology of Humans. Michel Drancourt und Didier Raoult (Hrsg.). Biospektrum, 2017(7), p. 847. Springer

Keller, Marcel; Krause, Johannes (2017). Den Seuchen auf der Spur: Genetische Untersuchungen zur Geschichte der Krankheitserreger. Yearbook of the Max Planck Society Max-Planck-Gesellschaft

Feldman, Michal; Harbeck, Michaela; Keller, Marcel; Spyrou, Maria A.; Rott, Andreas; Trautmann, Bernd; Scholz, Holger C.; Päffgen, Bernd; Peters, Joris; McCormick, Michael; Bos, Kirsten; Herbig, Alexander; Krause, Johannes (2016). A High-Coverage Yersinia pestis Genome from a Sixth-Century Justinianic Plague Victim. Molecular Biology and Evolution, 33(11), pp. 2911-2923. Oxford University Press 10.1093/molbev/msw170

Lazaridis, Iosif; Patterson, Nick; Mittnik, Alissa; Renaud, Gabriel; Mallick, Swapan; Kirsanow, Karola; Sudmant, Peter H.; Schraiber, Joshua G.; Castellano, Sergi; Lipson, Mark; Berger, Bonnie; Economou, Christos; Bollongino, Ruth; Fu, Qiaomei; Bos, Kirsten I.; Nordenfelt, Susanne; Li, Heng; Filippo, Cesare de; Prüfer, Kay; Sawyer, Susanne; ... (2014). Ancient human genomes suggest three ancestral populations for present-day Europeans. Nature, 513(7518), pp. 409-413. Macmillan Journals Ltd. 10.1038/nature13673

Conference or Workshop Item

Furtwängler, Anja; Steuri, Noah David; Milella, Marco; Martinet, Francesca; Raiteri, Luca; Mittnik, Alissa; Lösch, Sandra; Krause, Johannes (13 October 2023). Genetic Analysis of Neolithic Stone Cist Burials from the Aosta Valley, Northern Italy: Insights into Ancestry, Kinship, and Cultural Transition (Unpublished). In: What the dead tell us - Exploring societal behaviors of early European farmers through funerary practices (5000-4000 BCE). Bern. 13th of October 2023.

Lösch, Sandra; Siebke, Inga Katharina Elisabeth; Furtwängler, Anja; Steuri, Noah; Hafner, Albert; Ramstein, Marianne; Krause, Johannes (15 April 2020). Bioarchaeological analysis of Late Neolithic inhumations from a dolmen in Switzerland (Unpublished). In: 89th Annual Meeting of the American Association of Physical Anthropologists. Los Angeles.

Siebke, Inga; Furtwängler, Anja; Steuri, Noah; Krause, Johannes; Hafner, Albert; Lösch, Sandra (6 October 2018). Morphological Analyses of Late Neolithic human remains from Oberbipp (Unpublished). In: Jahresversammlung der Schweizerischen Gesellschaft für Anthropologie (SGA). Bern. 06.10.2018.

Siebke, Inga; Steuri, Noah; Furtwängler, Anja; Hafner, Albert; Krause, Johannes; Lösch, Sandra (2018). Living in Stone Age Switzerland – a Continuous Study of 5000 year old Human Bones from Switzerland (Unpublished). In: Graduate School for Cellular and Biomedical Sciences (GCB) Symposium. Bern. 01.02.2018.

Siebke, Inga; Steuri, Noah; Furtwängler, Anja; Hafner, Albert; Krause, Johannes; Lösch, Sandra (2018). The Dolmen of Oberbipp - first results (Unpublished). In: Jahresversammlung der Arbeitsgemeinschaft für die Urgeschichtsforschung in der Schweiz (AGUS). Bern. 23.02.2018.

Furtwängler, Anja; Reiter, Ella; Neumann, Gunnar U.; Siebke, Inga; Steuri, Noah; Wahl, Joachim; Hald, Jürgen; Schuenemann, Verena J.; Stockhammer, Philipp; Hafner, Albert; Lösch, Sandra; Krause, Johannes (2018). Genetic transition in the Swiss Late Neolithic and Early Bronze Age (Unpublished). In: Annual Meeting of the Society of Molecular Biology & Evolution (SMBE). Yokohama, Japan. 08.-12.07.2018.

Siebke, Inga; Steuri, Noah; Furtwängler, Anja; Hafner, Albert; Krause, Johannes; Lösch, Sandra (2018). An anthropological evaluation of Late Neolithic human remains from Switzerland (Unpublished). In: 24th Annual Meeting of European Association of Archaeologists (EAA). Barcelona. 05.-08.09.2018.

Furtwängler, Anja; Reiter, Ella; Neumann, Gunnar U.; Siebke, Inga; Steuri, Noah; Wahl, Joachim; Hald, Jürgen; Denaire, Anthony; Schnitzler, Bernadette; Schuenemann, Verena J.; Stockhammer, Philipp; Hafner, Albert; Lösch, Sandra; Schiffels, Stephan; Krause, Johannes (2018). Genetic transition in the Swiss Late Neolithic and Early Bronze Age (Unpublished). In: 8th International Symposium on Biomolecular Archaeology (ISBA). Jena, Germany. 18.-21.09.2018.

Keller, Marcel; Spyrou, Maria A.; Tukhbatova, Rezeda I.; Walker, Don; Castex, Dominique; Lösch, Sandra; Harbeck, Michaela; Herbig, Alexander; Bos, Kirsten I.; Krause, Johannes (2018). Yersinia pestis genomes recovered from 14th to 17th century plague burials elucidate the initiation and persistence of the Second Pandemic. (Unpublished). In: European Association of Archaeologists (EAA): Annual Meeting 2018. Barcelona.

Keller, Marcel; Spyrou, Maria A.; Haas-Gebhard, Brigitte; Päffgen, Bernd; Haberstroh, Jochen; Ribera, Albert; Nägele, Kathrin; Trautmann, Bernd; Peters, Joris; McCormick, Michael; Bos, Kirsten I.; Harbeck, Michaela; Herbig, Alexander; Krause, Johannes (2018). Ancient Yersinia pestis genomes reveal high diversity during the First Pandemic (6th to 8th c. CE) and genome decay parallel to the Second Pandemic (14th to 18th c. CE). (Unpublished). In: 1st European Yersinia Conference. Jena.

Keller, Marcel; Spyrou, Maria A.; Scheib, Christiana L.; Haas-Gebhard, Brigitte; Päffgen, Bernd; Haberstroh, Jochen; Ribera i Lacomba, Albert; Raynaud, Claude; Cessford, Craig; Kröpelin, Andreas; Neumann, Gunnar U.; Bates, Jessica S.; Trautmann, Bernd; Inskip, Sarah A.; Peters, Joris; Robb, John E.; Kivisild, Toomas; McCormick, Michael; Bos, Kirsten I.; Harbeck, Michaela; ... (2018). Ancient Yersinia pestis genomes from Britain, France, Germany and Spain reveal extensive strain diversity during the First Plague Pandemic (541-750 CE). (Unpublished). In: International Symposium on Biomolecular Archaeology (ISBA) 8. Jena.

Siebke, Inga; Furtwängler, Anja; Hafner, Albert; Krause, Johannes; Lösch, Sandra (22 April 2017). An Interdisciplinary Project on the Neolithic Population of Modern Switzerland. (Unpublished). In: The 86th Annual Meeting of the American Association of Physical Anthropologists (2017). Session 70. Human Skeletal Biology: Population History and Beyond. Contributed Posters. Chair: Molly K. Zuckerman.. New Orleans, United States of America. 19.-22.4.2017.

Keller, Marcel; Spyrou, Maria A.; Haas-Gebhard, Brigitte; Päffgen, Bernd; Haberstroh, Jochen; Ribera, Albert; Nägele, Kathrin; Trautmann, Bernd; Peters, Joris; McCormick, Michael; Bos, Kirsten I.; Harbeck, Michaela; Herbig, Alexander; Krause, Johannes (2017). Genetic diversity within the Justinianic Plague: New Yersinia pestis genomes from Spain and Bavaria. (Unpublished). In: German Society for Anthropology (GfA): 11th International Meeting. Geislingen an der Steige.

Keller, Marcel; Spyrou, Maria A.; Haas-Gebhard, Brigitte; Päffgen, Bernd; Haberstroh, Jochen; Ribera, Albert; Nägele, Kathrin; Trautmann, Bernd; Peters, Joris; Bos, Kirsten I.; McCormick, Michael; Harbeck, Michaela; Krause, Johannes (2017). Ancient Iberian and Central European Yersinia pestis genomes reveal genetic diversity of the Justinianic Plague (Unpublished). In: Society for Molecular Biology and Evolution (SMBE): Annual Meeting 2017. Austin.

Siebke, Inga; Hafner, Albert; Campana, Lorenzo; Furtwängler, Anja; Krause, Johannes; Lösch, Sandra (September 2016). Digging into the Swiss Neolithic with Modern Methods – 3D Documentation and Biochemical Analyses (Unpublished). In: 22nd Annual Meeting of the European Association of Archaeologists (EAA). Vilnius, Lithuania. 31.08.-04.09.2016.

Keller, Marcel; Haas-Gebhard, Brigitte; Päffgen, Bernd; Haberstroh, Jochen; Trautmann, Bernd; Spyrou, Maria A.; Peters, Joris; Bos, Kirsten I.; McCormick, Michael; Harbeck, Michaela; Krause, Johannes (2016). The First and Second Plague Pandemic in Bavaria, Germany – Preliminary Screening Results (Unpublished). In: International Symposium on Biomolecular Archaeology (ISBA) 7. Oxford.

Working Paper

Keller, Marcel; Spyrou, Maria A.; McCormick, Michael; Bos, Kirsten I.; Herbig, Alexander; Krause, Johannes (November 2019). Ancient Yersinia pestis genomes provide no evidence for the origins or spread of the Justinianic Plague. (Unpublished) (bioRxiv). Cold Spring Harbor Laboratory 10.1101/819698

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