09 Interdisciplinary Units > Next Generation Sequencing (NGS) Platform

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Number of items at this level: 336.

Aebi, Cindy Bianca

Aebi, Cindy Bianca; Fernandez, Javier Eduardo; Kittl, Sonja Cornelia; Tresch, Milena Laura; Perreten, Vincent; Overesch, Gudrun (2023). Characterization of third-generation cephalosporin-resistant Escherichia coli from slaughter calves and fattening pigs: A pilot study for monitoring antimicrobial resistance by whole genome sequencing in Switzerland. Schweizer Archiv für Tierheilkunde, 165(6), pp. 372-384. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00396

Alves Fernandes, Paula

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Draft genome of Trypanosoma b. brucei EATRO1125 (AnTaR1 serodeme) strain [Dataset]. In: EATRO1125 (AnTaR1 serodeme) pseudo chromosomes.

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Trypanosoma brucei EATRO1125 draft genome assembly (Contigs) [Dataset]. In: Trypanosoma brucei (EATRO1125) genome contigs.

Balmer, Pierre

Balmer, Pierre; Hariton, William V. J.; Sayar, Beyza; Jagannathan, Vidhya; Galichet, Arnaud; Leeb, Tosso; Roosje, Petra; Müller, Eliane J. (2021). SUV39H2 epigenetic silencing controls fate conversion of epidermal stem and progenitor cells. Journal of cell biology, 220(4) Rockefeller Institute Press 10.1083/jcb.201908178

Bannasch, Danika

Bannasch, Danika L.; Kaelin, Christopher B; Letko, Anna; Loechel, Robert; Hug, Petra; Jagannathan, Vidhya; Henkel, Jan; Roosje, Petra; Hytönen, Marjo K; Lohi, Hannes; Arumilli, Meharji; Minor, Katie M; Mickelson, James R; Drögemüller, Cord; Barsh, Gregory S; Leeb, Tosso (2021). Dog colour patterns explained by modular promoters of ancient canid origin. Nature ecology & evolution, 5(10), pp. 1415-1423. Nature Publishing Group 10.1038/s41559-021-01524-x

Becker, Jens Michael

Becker, Jens; Fernandez, Javier E; Rossano, Alexandra; Meylan, Mireille; Perreten, Vincent (2022). Clonal dissemination of MDR Pasteurella multocida ST79 in a small Swiss veal calf farm with high use of antibiotics. The journal of antimicrobial chemotherapy, 77(10), pp. 2886-2888. Oxford University Press 10.1093/jac/dkac270

Benarafa, Charaf

Radulovic, Emilia; Mehinagic, Kemal; Wüthrich, Tsering; Hilty, Markus; Posthaus, Horst; Summerfield, Artur; Ruggli, Nicolas; Benarafa, Charaf (2022). The baseline immunological and hygienic status of pigs impact disease severity of African swine fever. PLoS pathogens, 18(8), e1010522. Public Library of Science 10.1371/journal.ppat.1010522

Bevkal Subramanyaswamy, Shubha

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Draft genome of Trypanosoma b. brucei EATRO1125 (AnTaR1 serodeme) strain [Dataset]. In: EATRO1125 (AnTaR1 serodeme) pseudo chromosomes.

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Trypanosoma brucei EATRO1125 draft genome assembly (Contigs) [Dataset]. In: Trypanosoma brucei (EATRO1125) genome contigs.

Blatter, Sohvi Tuulikki

Kiener, Sarah; Åhman, Susanne; Cikota, Robert; Jagannathan, Vidhya; Blatter, Sohvi; Cvitas, Iva; Soto, Sara; Leeb, Tosso (2024). Heterozygous ASPRV1 frameshift variant in a Pembroke Welsh Corgi with ichthyosis. Animal genetics, 55(3), pp. 490-492. Wiley 10.1111/age.13423

Brunner, Magdalena Anna Theresa

Gerber, Nadja; Brunner, Magdalena A. T.; Jagannathan, Vidya; Leeb, Tosso; Gerhards, Nora M.; Welle, Monika M.; Dettwiler, Martina (2021). Transcriptional Differences between Canine Cutaneous Epitheliotropic Lymphoma and Immune-Mediated Dermatoses. Genes, 12(2) MDPI, Molecular Diversity Preservation International 10.3390/genes12020160

Chanchaithong, Pattrarat

Chanchaithong, Pattrarat; Perreten, Vincent; Schwendener, Sybille (2019). Macrococcus canis contains recombinogenic methicillin resistance elements and the mecB plasmid found in Staphylococcus aureus. Journal of antimicrobial chemotherapy, 74(9), pp. 2531-2536. Oxford University Press 10.1093/jac/dkz260

Christen, Matthias

Christen, Matthias; Gregor, Anne; Gutierrez-Quintana, Rodrigo; Bongers, Jos; Rupp, Angie; Penderis, Jacques; Shelton, G Diane; Jagannathan, Vidhya; Zweier, Christiane; Leeb, Tosso (2024). NDUFS7 variant in dogs with Leigh syndrome and its functional validation in a Drosophila melanogaster model. Scientific Reports, 14(2975) Nature Publishing Group 10.1038/s41598-024-53314-7

Rawson, Faye; Christen, Matthias; Rose, Jeremy; Paran, Emilie; Leeb, Tosso; Fadda, Angela (2024). Polioencephalopathy in Eurasier dogs. Journal of veterinary internal medicine, 38(1), pp. 277-284. Wiley 10.1111/jvim.16945

Christen, Matthias Theo

Christen, Matthias; Zdora, Isabel; Leschnik, Michael; Jagannathan, Vidhya; Puff, Christina; Hünerfauth, Enrice; Volk, Holger A; Baumgärtner, Wolfgang; Koch, Tessa C; Schäfer, Wencke; Kleiter, Miriam; Leeb, Tosso (2023). RALGAPA1 Deletion in Belgian Shepherd Dogs with Cerebellar Ataxia. Genes, 14(8) MDPI, Molecular Diversity Preservation International 10.3390/genes14081520

Lourdes Frehner, Bianca; Christen, Matthias; Reichler, Iris M; Jagannathan, Vidhya; Novacco, Marilisa; Riond, Barbara; Peters, Laureen M; Suárez Sánchez-Andrade, José; Pieńkowska-Schelling, Aldona; Schelling, Claude; Kipar, Anja; Leeb, Tosso; Balogh, Orsolya (2023). Autosomal recessive hyposegmentation of granulocytes in Australian Shepherd Dogs indicates a role for LMBR1L in myeloid leukocytes. PLoS genetics, 19(6), e1010805. Public Library of Science 10.1371/journal.pgen.1010805

Gutierrez-Quintana, Rodrigo; Christen, Matthias; Faller, Kiterie M E; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso (2023). Response to letter regarding "SCN9A variant in a family of mixed breed dogs with congenital insensitivity to pain". Journal of veterinary internal medicine, 37(3), p. 793. Wiley 10.1111/jvim.16707

Christen, Matthias; Gonzalo-Nadal, Veronica; Kaczmarska, Adriana; Dyrka, Magdalena; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso; Gutierrez-Quintana, Rodrigo (2023). A novel missense variant in the L2HGDH gene in a cat with L-2-hydroxyglutaric aciduria and multicystic cerebral lesions. Journal of veterinary internal medicine, 37(2), pp. 676-680. Wiley 10.1111/jvim.16675

Gutierrez-Quintana, Rodrigo; Christen, Matthias; Faller, Kiterie M E; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso (2023). SCN9A variant in a family of mixed breed dogs with congenital insensitivity to pain. Journal of veterinary internal medicine, 37(1), pp. 230-235. Wiley 10.1111/jvim.16610

Hilton, Stephanie; Christen, Matthias; Bilzer, Thomas; Jagannathan, Vidhya; Leeb, Tosso; Giger, Urs (2023). Dystrophin (DMD) Missense Variant in Cats with Becker-Type Muscular Dystrophy. International journal of molecular sciences, 24(4), p. 3192. MDPI 10.3390/ijms24043192

Christen, Matthias; Ludwig-Peisker, Odette; Jagannathan, Vidhya; Hetzel, Udo; Schönball, Ulrike; Leeb, Tosso (2023). STK36 splice site variant in an Australian Shepherd dog with primary ciliary dyskinesia. Animal genetics, 54(3), pp. 412-415. Wiley 10.1111/age.13306

Dell'Apa, Diletta; Fumeo, Martina; Volta, Antonella; Bernardini, Marco; Fidanzio, Francesca; Buffagni, Valentina; Christen, Matthias; Jagannathan, Vidhya; Leeb, Tosso; Bianchi, Ezio (2023). Case report: Sacral agenesis in two boxer dogs: clinical presentation, diagnostic investigations, and outcome. Frontiers in veterinary science, 10, p. 1201484. Frontiers Media 10.3389/fvets.2023.1201484

Christen, Matthias; Gutierrez-Quintana, Rodrigo; Vandenberghe, Helene; Kaczmarska, Adriana; Penderis, Jacques; José-López, Roberto; Rupp, Angie; Griffiths, Ian R; Jagannathan, Vidhya; Leeb, Tosso (2022). Mitochondrial fission factor (MFF) frameshift variant in Bullmastiffs with mitochondrial fission encephalopathy. Animal genetics, 53(6), pp. 814-820. Wiley 10.1111/age.13263

Rudd Garces, Gabriela; Christen, Matthias; Loechel, Robert; Jagannathan, Vidhya; Leeb, Tosso (2022). FYCO1 Frameshift Deletion in Wirehaired Pointing Griffon Dogs with Juvenile Cataract. Genes, 13(2), p. 334. MDPI, Molecular Diversity Preservation International 10.3390/genes13020334

Christen, Matthias; Rupp, Stefan; Van Soens, Iris; Bhatti, Sofie F. M.; Matiasek, Kaspar; von Klopmann, Thilo; Jagannathan, Vidhya; Madden, Indiana; Batcher, Kevin; Bannasch, Danika; Leeb, Tosso (2022). SLC25A12 Missense Variant in Nova Scotia Duck Tolling Retrievers Affected by Cerebellar Degeneration—Myositis Complex (CDMC). Genes, 13(7), p. 1223. MDPI, Molecular Diversity Preservation International 10.3390/genes13071223

Østergård Jensen, Sarah; Christen, Matthias; Rondahl, Veronica; Holland, Christopher T.; Jagannathan, Vidhya; Leeb, Tosso; Giger, Urs (2022). EHBP1L1 Frameshift Deletion in English Springer Spaniel Dogs with Dyserythropoietic Anemia and Myopathy Syndrome (DAMS) or Neonatal Losses. Genes, 13(9), p. 1533. MDPI, Molecular Diversity Preservation International 10.3390/genes13091533

Christen, Matthias; Bongers, Jos; Mathis, Déborah; Jagannathan, Vidya; Quintana, Rodrigo Gutierrez; Leeb, Tosso (2022). ACADM Frameshift Variant in Cavalier King Charles Spaniels with Medium-Chain Acyl-CoA Dehydrogenase Deficiency. Genes, 13(10), p. 1847. MDPI 10.3390/genes13101847

Christen, Matthias; Reineking, Wencke; Beineke, Andreas; Jagannathan, Vidhya; Baumgärtner, Wolfgang; Leeb, Tosso (2021). Polyadenine insertion disrupting the G6PC1 gene in German Pinschers with glycogen storage disease type Ia (GSD1A). Animal genetics, 52(6), pp. 900-902. Wiley 10.1111/age.13146

Christen, Matthias; Högler, Sandra; Kleiter, Miriam; Leschnik, Michael; Weber, Corinna; Thaller, Denise; Jagannathan, Vidya; Leeb, Tosso (2021). Deletion of the SELENOP gene leads to CNS atrophy with cerebellar ataxia in dogs. PLoS genetics, 17(8), e1009716. Public Library of Science 10.1371/journal.pgen.1009716

Christen, Matthias; Janzen, Nils; Fraser, Anne; Sewell, Adrian C.; Jagannathan, Vidhya; Guevar, Julien; Leeb, Tosso; Sanchez-Masian, Daniel (2021). L2HGDH Missense Variant in a Cat with L-2-Hydroxyglutaric Aciduria. Genes, 12(5), p. 682. MDPI, Molecular Diversity Preservation International 10.3390/genes12050682

Christen, Matthias; de le Roi, Madeleine; Jagannathan, Vidhya; Becker, Kathrin; Leeb, Tosso (2021). MYO5A Frameshift Variant in a Miniature Dachshund with Coat Color Dilution and Neurological Defects Resembling Human Griscelli Syndrome Type 1. Genes, 12(10), p. 1479. MDPI, Molecular Diversity Preservation International 10.3390/genes12101479

Christen, Matthias; Booij-Vrieling, Henriëtte; Oksa-Minalto, Jelena; de Vries, Cynthia; Kehl, Alexandra; Jagannathan, Vidhya; Leeb, Tosso (2021). MIA3 Splice Defect in Cane Corso Dogs with Dental-Skeletal-Retinal Anomaly (DSRA). Genes, 12(10), p. 1497. MDPI, Molecular Diversity Preservation International 10.3390/genes12101497

Christen, Matthias; Indzhova, Victoria; Guo, Ling T.; Jagannathan, Vidhya; Leeb, Tosso; Shelton, G. Diane; Brocal, Josep (2021). LAMA2 Nonsense Variant in an Italian Greyhound with Congenital Muscular Dystrophy. Genes, 12(11), p. 1823. MDPI, Molecular Diversity Preservation International 10.3390/genes12111823

Collaud, Alexandra

Hurni, J I; Kaiser-Thom, S; Gerber, V; Keller, J E; Collaud, A; Fernandez, J; Schwendener, S; Perreten, V (2022). Prevalence and whole genome-based phylogenetic, virulence and antibiotic ­resistance characteristics of nasal ­Staphylococcus aureus in healthy Swiss horses. Schweizer Archiv für Tierheilkunde, 164(7), pp. 499-512. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00360

Kaiser-Thom, Sarah; Gerber, Vinzenz; Collaud, Alexandra; Hurni, Joel; Perreten, Vincent (2022). Prevalence and WGS-based characteristics of Staphylococcus aureus in the nasal mucosa and pastern of horses with equine pastern dermatitis. BMC veterinary research, 18(1), p. 79. BioMed Central 10.1186/s12917-021-03053-y

Cvitas, Iva

Kiener, Sarah; Åhman, Susanne; Cikota, Robert; Jagannathan, Vidhya; Blatter, Sohvi; Cvitas, Iva; Soto, Sara; Leeb, Tosso (2024). Heterozygous ASPRV1 frameshift variant in a Pembroke Welsh Corgi with ichthyosis. Animal genetics, 55(3), pp. 490-492. Wiley 10.1111/age.13423

Cvitas, Iva; Oberhaensli, Simone; Leeb, Tosso; Marti, Eliane (2022). Equine keratinocytes in the pathogenesis of insect bite hypersensitivity: Just another brick in the wall? PLoS ONE, 17(8), e0266263. Public Library of Science 10.1371/journal.pone.0266263

De-Kayne, Rishi

Frei, David; De-Kayne, Rishi; Selz, Oliver M; Seehausen, Ole; Feulner, Philine G D (2022). Genomic variation from an extinct species is retained in the extant radiation following speciation reversal. Nature ecology & evolution, 6(4), pp. 461-468. Springer Nature 10.1038/s41559-022-01665-7

De-Kayne, Rishi; Selz, Oliver M; Marques, David A; Frei, David; Seehausen, Ole; Feulner, Philine G D (2022). Genomic architecture of adaptive radiation and hybridization in Alpine whitefish. Nature Communications, 13(1), p. 4479. Springer Nature 10.1038/s41467-022-32181-8

De-Kayne, Rishi; Zoller, Stefan; Feulner, Philine G. D. (2020). A de novo chromosome‐level genome assembly of Coregonus sp. “Balchen” : one representative of the Swiss Alpine whitefish radiation. Molecular ecology resources, 20(4), pp. 1093-1109. Wiley 10.1111/1755-0998.13187

Dettwiler, Martina Andrea

Gerber, Nadja; Brunner, Magdalena A. T.; Jagannathan, Vidya; Leeb, Tosso; Gerhards, Nora M.; Welle, Monika M.; Dettwiler, Martina (2021). Transcriptional Differences between Canine Cutaneous Epitheliotropic Lymphoma and Immune-Mediated Dermatoses. Genes, 12(2) MDPI, Molecular Diversity Preservation International 10.3390/genes12020160

Dolder, Silvia

Safari, Fatemeh; Yeoh, Wen Jie; Perret-Gentil, Saskia; Klenke, Frank; Dolder, Silvia; Hofstetter, Wilhelm; Krebs, Philippe (2024). SHIP1 deficiency causes inflammation-dependent retardation in skeletal growth. Life science alliance, 7(5) EMBO Press 10.26508/lsa.202302297

Donà, Valentina

Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337

Drögemüller, Cord

Brunetti, Barbara; Bacci, Barbara; Abbate, Jessica Maria; Tura, Giorgia; Paciello, Orlando; Vaccaro, Emanuela; Prisco, Francesco; Gandini, Gualtiero; Okonji, Samuel; Paola, Andrea di; Letko, Anna; Drögemüller, Cord; Jagannathan, Vidhya; Turba, Maria Elena; Ogundipe, Tolulope Grace; Lorenzini, Luca; Rosati, Marco; Psalla, Dimitra; Leeb, Tosso and Drögemüller, Michaela (2023). SGCD Missense Variant in a Lagotto Romagnolo Dog with Autosomal Recessively Inherited Limb-Girdle Muscular Dystrophy. Genes, 14(8) MDPI, Molecular Diversity Preservation International 10.3390/genes14081641

Signer-Hasler, Heidi; Henkel, Jan; Bangerter, Erika; Bulut, Zafer; Drögemüller, Cord; Leeb, Tosso; Flury, Christine (2022). Runs of homozygosity in Swiss goats reveal genetic changes associated with domestication and modern selection. Genetics, selection, evolution, 54(1), p. 6. BioMed Central 10.1186/s12711-022-00695-w

Bannasch, Danika L.; Kaelin, Christopher B; Letko, Anna; Loechel, Robert; Hug, Petra; Jagannathan, Vidhya; Henkel, Jan; Roosje, Petra; Hytönen, Marjo K; Lohi, Hannes; Arumilli, Meharji; Minor, Katie M; Mickelson, James R; Drögemüller, Cord; Barsh, Gregory S; Leeb, Tosso (2021). Dog colour patterns explained by modular promoters of ancient canid origin. Nature ecology & evolution, 5(10), pp. 1415-1423. Nature Publishing Group 10.1038/s41559-021-01524-x

Henkel, Jan; Dubacher, Alexandra; Bangerter, Erika; Herren, Ursula; Ammann, Philippe; Drögemüller, Cord; Flury, Christine; Leeb, Tosso (2021). Introgression of ASIP and TYRP1 Alleles Explains Coat Color Variation in Valais Goats. Journal of heredity, 112(5), pp. 452-457. Oxford University Press 10.1093/jhered/esab024

O’Toole, Donal; Häfliger, Irene M.; Leuthard, Fabienne; Schumaker, Brant; Steadman, Lynn; Murphy, Brian; Drögemüller, Cord; Leeb, Tosso (2021). X-Linked Hypohidrotic Ectodermal Dysplasia in Crossbred Beef Cattle Due to a Large Deletion in EDA. Animals, 11(3), p. 657. MDPI 10.3390/ani11030657

Drögemüller, Michaela

Brunetti, Barbara; Bacci, Barbara; Abbate, Jessica Maria; Tura, Giorgia; Paciello, Orlando; Vaccaro, Emanuela; Prisco, Francesco; Gandini, Gualtiero; Okonji, Samuel; Paola, Andrea di; Letko, Anna; Drögemüller, Cord; Jagannathan, Vidhya; Turba, Maria Elena; Ogundipe, Tolulope Grace; Lorenzini, Luca; Rosati, Marco; Psalla, Dimitra; Leeb, Tosso and Drögemüller, Michaela (2023). SGCD Missense Variant in a Lagotto Romagnolo Dog with Autosomal Recessively Inherited Limb-Girdle Muscular Dystrophy. Genes, 14(8) MDPI, Molecular Diversity Preservation International 10.3390/genes14081641

Meadows, Jennifer R S; Kidd, Jeffrey M; Wang, Guo-Dong; Parker, Heidi G; Schall, Peter Z; Bianchi, Matteo; Christmas, Matthew J; Bougiouri, Katia; Buckley, Reuben M; Hitte, Christophe; Nguyen, Anthony K; Wang, Chao; Jagannathan, Vidhya; Niskanen, Julia E; Frantz, Laurent A F; Arumilli, Meharji; Hundi, Sruthi; Lindblad-Toh, Kerstin; Ginja, Catarina; Agustina, Kadek Karang; ... (2023). Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture. Genome biology, 24(1), p. 187. BioMed Central Ltd. 10.1186/s13059-023-03023-7

Drögemüller, Michaela; Klein, Nadine; Steffensen, Rikke Lill; Keiner, Miriam; Jagannathan, Vidhya; Leeb, Tosso (2023). PKD1 Nonsense Variant in a Lagotto Romagnolo Family with Polycystic Kidney Disease. Genes, 14(6) MDPI, Molecular Diversity Preservation International 10.3390/genes14061210

Endimiani, Andrea

Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337

Fernandez, Javier E; Seth-Smith, Helena M B; Nordmann, Patrice; Egli, Adrian; Endimiani, Andrea; Perreten, Vincent (2022). Intra- and Interspecies Spread of a Novel Conjugative Multidrug Resistance IncC Plasmid Coharboring blaOXA-181 and armA in a Cystic Fibrosis Patient. Microbiology spectrum, 10(5), e0312122. American Society for Microbiology 10.1128/spectrum.03121-22

Brilhante, Michael; Gobeli Brawand, Stefanie; Endimiani, Andrea; Rohrbach, Helene; Kittl, Sonja; Willi, Barbara; Schuller, Simone; Perreten, Vincent (2021). Two high-risk clones of carbapenemase-producing Klebsiella pneumoniae that cause infections in pets and are present in the environment of a veterinary referral hospital. Journal of antimicrobial chemotherapy, 76(5), pp. 1140-1149. Oxford University Press 10.1093/jac/dkab028

Fernandez, Javier Eduardo

Aebi, Cindy Bianca; Fernandez, Javier Eduardo; Kittl, Sonja Cornelia; Tresch, Milena Laura; Perreten, Vincent; Overesch, Gudrun (2023). Characterization of third-generation cephalosporin-resistant Escherichia coli from slaughter calves and fattening pigs: A pilot study for monitoring antimicrobial resistance by whole genome sequencing in Switzerland. Schweizer Archiv für Tierheilkunde, 165(6), pp. 372-384. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00396

Fernandez, Javier E; Seth-Smith, Helena M B; Nordmann, Patrice; Egli, Adrian; Endimiani, Andrea; Perreten, Vincent (2022). Intra- and Interspecies Spread of a Novel Conjugative Multidrug Resistance IncC Plasmid Coharboring blaOXA-181 and armA in a Cystic Fibrosis Patient. Microbiology spectrum, 10(5), e0312122. American Society for Microbiology 10.1128/spectrum.03121-22

Becker, Jens; Fernandez, Javier E; Rossano, Alexandra; Meylan, Mireille; Perreten, Vincent (2022). Clonal dissemination of MDR Pasteurella multocida ST79 in a small Swiss veal calf farm with high use of antibiotics. The journal of antimicrobial chemotherapy, 77(10), pp. 2886-2888. Oxford University Press 10.1093/jac/dkac270

Hurni, J I; Kaiser-Thom, S; Gerber, V; Keller, J E; Collaud, A; Fernandez, J; Schwendener, S; Perreten, V (2022). Prevalence and whole genome-based phylogenetic, virulence and antibiotic ­resistance characteristics of nasal ­Staphylococcus aureus in healthy Swiss horses. Schweizer Archiv für Tierheilkunde, 164(7), pp. 499-512. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00360

Fernandez, Javier Eduardo; Perreten, Vincent; Schwendener, Sybille (2021). The novel macrolide resistance genes mef(F) and msr(G) are located on a plasmid in Macrococcus canis and a transposon in Macrococcus caseolyticus. The journal of antimicrobial chemotherapy, 76(1), pp. 48-54. Oxford University Press 10.1093/jac/dkaa405

Feulner, Philine

Le Pennec, Guénolé; Retel, Cas; Kowallik, Vienna; Becks, Lutz; Feulner, Philine G D (2024). Demographic fluctuations and selection during host-parasite coevolution interactively increase genetic diversity. Molecular Ecology, 33(10), e16939. Wiley-Blackwell 10.1111/mec.16939

Frei, David; Reichlin, Pascal; Seehausen, Ole; Feulner, Philine G. D. (2023). Introgression from extinct species facilitates adaptation to its vacated niche. Molecular Ecology, 32(4), pp. 841-853. Wiley-Blackwell 10.1111/mec.16791

Frei, David; De-Kayne, Rishi; Selz, Oliver M; Seehausen, Ole; Feulner, Philine G D (2022). Genomic variation from an extinct species is retained in the extant radiation following speciation reversal. Nature ecology & evolution, 6(4), pp. 461-468. Springer Nature 10.1038/s41559-022-01665-7

Retel, Cas; Kowallik, Vienna; Becks, Lutz; Feulner, Philine G. D. (2022). Strong selection and high mutation supply characterize experimental Chlorovirus evolution. Virus evolution, 8(1), pp. 1-14. Oxford University Press 10.1093/ve/veac003

De-Kayne, Rishi; Selz, Oliver M; Marques, David A; Frei, David; Seehausen, Ole; Feulner, Philine G D (2022). Genomic architecture of adaptive radiation and hybridization in Alpine whitefish. Nature Communications, 13(1), p. 4479. Springer Nature 10.1038/s41467-022-32181-8

De-Kayne, Rishi; Zoller, Stefan; Feulner, Philine G. D. (2020). A de novo chromosome‐level genome assembly of Coregonus sp. “Balchen” : one representative of the Swiss Alpine whitefish radiation. Molecular ecology resources, 20(4), pp. 1093-1109. Wiley 10.1111/1755-0998.13187

Fouché, Nathalie Elisa

Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501

Franzen, Jan

Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501

Frei, David Florian

Frei, David; Reichlin, Pascal; Seehausen, Ole; Feulner, Philine G. D. (2023). Introgression from extinct species facilitates adaptation to its vacated niche. Molecular Ecology, 32(4), pp. 841-853. Wiley-Blackwell 10.1111/mec.16791

Frei, David; De-Kayne, Rishi; Selz, Oliver M; Seehausen, Ole; Feulner, Philine G D (2022). Genomic variation from an extinct species is retained in the extant radiation following speciation reversal. Nature ecology & evolution, 6(4), pp. 461-468. Springer Nature 10.1038/s41559-022-01665-7

De-Kayne, Rishi; Selz, Oliver M; Marques, David A; Frei, David; Seehausen, Ole; Feulner, Philine G D (2022). Genomic architecture of adaptive radiation and hybridization in Alpine whitefish. Nature Communications, 13(1), p. 4479. Springer Nature 10.1038/s41467-022-32181-8

Galichet, Arnaud

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Gerber, Nadja

Gerber, Nadja; Brunner, Magdalena A. T.; Jagannathan, Vidya; Leeb, Tosso; Gerhards, Nora M.; Welle, Monika M.; Dettwiler, Martina (2021). Transcriptional Differences between Canine Cutaneous Epitheliotropic Lymphoma and Immune-Mediated Dermatoses. Genes, 12(2) MDPI, Molecular Diversity Preservation International 10.3390/genes12020160

Gerber, Vinzenz

Sage, Sophie E.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2024). Single-cell profiling of bronchoalveolar cells reveals a Th17 signature in neutrophilic severe equine asthma. Immunology, 171(4), pp. 549-565. Wiley-Blackwell 10.1111/imm.13745

Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501

Hurni, J I; Kaiser-Thom, S; Gerber, V; Keller, J E; Collaud, A; Fernandez, J; Schwendener, S; Perreten, V (2022). Prevalence and whole genome-based phylogenetic, virulence and antibiotic ­resistance characteristics of nasal ­Staphylococcus aureus in healthy Swiss horses. Schweizer Archiv für Tierheilkunde, 164(7), pp. 499-512. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00360

Kaiser-Thom, Sarah; Gerber, Vinzenz; Collaud, Alexandra; Hurni, Joel; Perreten, Vincent (2022). Prevalence and WGS-based characteristics of Staphylococcus aureus in the nasal mucosa and pastern of horses with equine pastern dermatitis. BMC veterinary research, 18(1), p. 79. BioMed Central 10.1186/s12917-021-03053-y

Sage, Sophie E.; Nicholson, Pamela; Peters, Laureen M.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2022). Single-cell gene expression analysis of cryopreserved equine bronchoalveolar cells (In Press). Frontiers in immunology, 13 Frontiers Research Foundation 10.3389/fimmu.2022.929922

Sage, Sophie Elena; Nicholson, Pamela; Leeb, Tosso; Gerber, Vinzenz; Jagannathan, Vidhya (2022). Long-Read Transcriptome of Equine Bronchoalveolar Cells. Genes, 13(10), p. 1722. MDPI, Molecular Diversity Preservation International 10.3390/genes13101722

Gerhards, Nora Merete

Gerber, Nadja; Brunner, Magdalena A. T.; Jagannathan, Vidya; Leeb, Tosso; Gerhards, Nora M.; Welle, Monika M.; Dettwiler, Martina (2021). Transcriptional Differences between Canine Cutaneous Epitheliotropic Lymphoma and Immune-Mediated Dermatoses. Genes, 12(2) MDPI, Molecular Diversity Preservation International 10.3390/genes12020160

Gobeli, Stefanie

Brilhante, Michael; Gobeli Brawand, Stefanie; Endimiani, Andrea; Rohrbach, Helene; Kittl, Sonja; Willi, Barbara; Schuller, Simone; Perreten, Vincent (2021). Two high-risk clones of carbapenemase-producing Klebsiella pneumoniae that cause infections in pets and are present in the environment of a veterinary referral hospital. Journal of antimicrobial chemotherapy, 76(5), pp. 1140-1149. Oxford University Press 10.1093/jac/dkab028

Gregor, Anne

Christen, Matthias; Gregor, Anne; Gutierrez-Quintana, Rodrigo; Bongers, Jos; Rupp, Angie; Penderis, Jacques; Shelton, G Diane; Jagannathan, Vidhya; Zweier, Christiane; Leeb, Tosso (2024). NDUFS7 variant in dogs with Leigh syndrome and its functional validation in a Drosophila melanogaster model. Scientific Reports, 14(2975) Nature Publishing Group 10.1038/s41598-024-53314-7

Guevar, Julien Jean

Gutierrez-Quintana, Rodrigo; Christen, Matthias; Faller, Kiterie M E; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso (2023). Response to letter regarding "SCN9A variant in a family of mixed breed dogs with congenital insensitivity to pain". Journal of veterinary internal medicine, 37(3), p. 793. Wiley 10.1111/jvim.16707

Christen, Matthias; Gonzalo-Nadal, Veronica; Kaczmarska, Adriana; Dyrka, Magdalena; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso; Gutierrez-Quintana, Rodrigo (2023). A novel missense variant in the L2HGDH gene in a cat with L-2-hydroxyglutaric aciduria and multicystic cerebral lesions. Journal of veterinary internal medicine, 37(2), pp. 676-680. Wiley 10.1111/jvim.16675

Gutierrez-Quintana, Rodrigo; Christen, Matthias; Faller, Kiterie M E; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso (2023). SCN9A variant in a family of mixed breed dogs with congenital insensitivity to pain. Journal of veterinary internal medicine, 37(1), pp. 230-235. Wiley 10.1111/jvim.16610

Christen, Matthias; Janzen, Nils; Fraser, Anne; Sewell, Adrian C.; Jagannathan, Vidhya; Guevar, Julien; Leeb, Tosso; Sanchez-Masian, Daniel (2021). L2HGDH Missense Variant in a Cat with L-2-Hydroxyglutaric Aciduria. Genes, 12(5), p. 682. MDPI, Molecular Diversity Preservation International 10.3390/genes12050682

Gurtner, Corinne

Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501

Hariton, William Vincent

Balmer, Pierre; Hariton, William V. J.; Sayar, Beyza; Jagannathan, Vidhya; Galichet, Arnaud; Leeb, Tosso; Roosje, Petra; Müller, Eliane J. (2021). SUV39H2 epigenetic silencing controls fate conversion of epidermal stem and progenitor cells. Journal of cell biology, 220(4) Rockefeller Institute Press 10.1083/jcb.201908178

Hass, Pascal-Kolja

Kiener, Sarah; Apostolopoulos, Neoklis; Schissler, Jennifer; Hass, Pascal-Kolja; Leuthard, Fabienne; Jagannathan, Vidhya; Schuppisser, Carole; Soto, Sara; Welle, Monika; Mayer, Ursula; Leeb, Tosso; Fischer, Nina M; Kaessmeyer, Sabine (2022). Independent COL5A1 Variant in Cats with Ehlers-Danlos Syndrome. Genes, 13(5), p. 797. MDPI, Molecular Diversity Preservation International 10.3390/genes13050797

Heckel, Gerald

Wang, Xuejing; Peischl, Stephan; Heckel, Gerald (2023). Demographic history and genomic consequences of 10,000 generations of isolation in a wild mammal. Current biology, 33(10), 2051-2062.e4. Cell Press 10.1016/j.cub.2023.04.042

Henkel, Jan Wolfgang

Signer-Hasler, Heidi; Henkel, Jan; Bangerter, Erika; Bulut, Zafer; Drögemüller, Cord; Leeb, Tosso; Flury, Christine (2022). Runs of homozygosity in Swiss goats reveal genetic changes associated with domestication and modern selection. Genetics, selection, evolution, 54(1), p. 6. BioMed Central 10.1186/s12711-022-00695-w

Bannasch, Danika L.; Kaelin, Christopher B; Letko, Anna; Loechel, Robert; Hug, Petra; Jagannathan, Vidhya; Henkel, Jan; Roosje, Petra; Hytönen, Marjo K; Lohi, Hannes; Arumilli, Meharji; Minor, Katie M; Mickelson, James R; Drögemüller, Cord; Barsh, Gregory S; Leeb, Tosso (2021). Dog colour patterns explained by modular promoters of ancient canid origin. Nature ecology & evolution, 5(10), pp. 1415-1423. Nature Publishing Group 10.1038/s41559-021-01524-x

Henkel, Jan; Dubacher, Alexandra; Bangerter, Erika; Herren, Ursula; Ammann, Philippe; Drögemüller, Cord; Flury, Christine; Leeb, Tosso (2021). Introgression of ASIP and TYRP1 Alleles Explains Coat Color Variation in Valais Goats. Journal of heredity, 112(5), pp. 452-457. Oxford University Press 10.1093/jhered/esab024

Hierweger, Melanie Michaela

Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501

Hiltbrunner, Melanie

Liu, Zuyao; Roesti, Marius; Marques, David; Hiltbrunner, Melanie; Saladin, Verena; Peichel, Catherine L (2021). Chromosomal fusions facilitate adaptation to divergent environments in threespine stickleback (Submitted). Molecular Biology and Evolution Oxford University Press 10.1093/molbev/msab358

Hilty, Markus

Radulovic, Emilia; Mehinagic, Kemal; Wüthrich, Tsering; Hilty, Markus; Posthaus, Horst; Summerfield, Artur; Ruggli, Nicolas; Benarafa, Charaf (2022). The baseline immunological and hygienic status of pigs impact disease severity of African swine fever. PLoS pathogens, 18(8), e1010522. Public Library of Science 10.1371/journal.ppat.1010522

Hofstetter, Wilhelm

Safari, Fatemeh; Yeoh, Wen Jie; Perret-Gentil, Saskia; Klenke, Frank; Dolder, Silvia; Hofstetter, Wilhelm; Krebs, Philippe (2024). SHIP1 deficiency causes inflammation-dependent retardation in skeletal growth. Life science alliance, 7(5) EMBO Press 10.26508/lsa.202302297

Hurni, Joel Immanuel

Hurni, J I; Kaiser-Thom, S; Gerber, V; Keller, J E; Collaud, A; Fernandez, J; Schwendener, S; Perreten, V (2022). Prevalence and whole genome-based phylogenetic, virulence and antibiotic ­resistance characteristics of nasal ­Staphylococcus aureus in healthy Swiss horses. Schweizer Archiv für Tierheilkunde, 164(7), pp. 499-512. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00360

Kaiser-Thom, Sarah; Gerber, Vinzenz; Collaud, Alexandra; Hurni, Joel; Perreten, Vincent (2022). Prevalence and WGS-based characteristics of Staphylococcus aureus in the nasal mucosa and pastern of horses with equine pastern dermatitis. BMC veterinary research, 18(1), p. 79. BioMed Central 10.1186/s12917-021-03053-y

Huynh-Do, Uyen

Kiener, Sarah; Ribi, Camillo; Keller, Irene; Chizzolini, Carlo; Trendelenburg, Marten; Huynh-Do, Uyen; von Kempis, Johannes; Leeb, Tosso (2021). Variants Affecting the C-Terminal Tail of UNC93B1 Are Not a Common Risk Factor for Systemic Lupus Erythematosus. Genes, 12(8), p. 1268. MDPI, Molecular Diversity Preservation International 10.3390/genes12081268

Häfliger, Irene Monika

O’Toole, Donal; Häfliger, Irene M.; Leuthard, Fabienne; Schumaker, Brant; Steadman, Lynn; Murphy, Brian; Drögemüller, Cord; Leeb, Tosso (2021). X-Linked Hypohidrotic Ectodermal Dysplasia in Crossbred Beef Cattle Due to a Large Deletion in EDA. Animals, 11(3), p. 657. MDPI 10.3390/ani11030657

Jagannathan, Vidya

Kiener, Sarah; Åhman, Susanne; Cikota, Robert; Jagannathan, Vidhya; Blatter, Sohvi; Cvitas, Iva; Soto, Sara; Leeb, Tosso (2024). Heterozygous ASPRV1 frameshift variant in a Pembroke Welsh Corgi with ichthyosis. Animal genetics, 55(3), pp. 490-492. Wiley 10.1111/age.13423

Kaelin, Christopher B; McGowan, Kelly A; Hutcherson, Anthony D; Delay, John M; Li, Jeremiah H; Kiener, Sarah; Jagannathan, Vidhya; Leeb, Tosso; Murphy, William J; Barsh, Gregory S (2024). Ancestry dynamics and trait selection in a designer cat breed. Current biology, 34(7), 1506-1518.e7. Cell Press 10.1016/j.cub.2024.02.075

Sage, Sophie E.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2024). Single-cell profiling of bronchoalveolar cells reveals a Th17 signature in neutrophilic severe equine asthma. Immunology, 171(4), pp. 549-565. Wiley-Blackwell 10.1111/imm.13745

Christen, Matthias; Gregor, Anne; Gutierrez-Quintana, Rodrigo; Bongers, Jos; Rupp, Angie; Penderis, Jacques; Shelton, G Diane; Jagannathan, Vidhya; Zweier, Christiane; Leeb, Tosso (2024). NDUFS7 variant in dogs with Leigh syndrome and its functional validation in a Drosophila melanogaster model. Scientific Reports, 14(2975) Nature Publishing Group 10.1038/s41598-024-53314-7

Kiener, Sarah; Åhman, Susanne; Jagannathan, Vidhya; Soto, Sara; Leeb, Tosso (2023). Heterozygous KRT10 missense variant in a Chihuahua with severe epidermolytic ichthyosis. Animal genetics, 54(5), pp. 652-654. Wiley 10.1111/age.13341

Brunetti, Barbara; Bacci, Barbara; Abbate, Jessica Maria; Tura, Giorgia; Paciello, Orlando; Vaccaro, Emanuela; Prisco, Francesco; Gandini, Gualtiero; Okonji, Samuel; Paola, Andrea di; Letko, Anna; Drögemüller, Cord; Jagannathan, Vidhya; Turba, Maria Elena; Ogundipe, Tolulope Grace; Lorenzini, Luca; Rosati, Marco; Psalla, Dimitra; Leeb, Tosso and Drögemüller, Michaela (2023). SGCD Missense Variant in a Lagotto Romagnolo Dog with Autosomal Recessively Inherited Limb-Girdle Muscular Dystrophy. Genes, 14(8) MDPI, Molecular Diversity Preservation International 10.3390/genes14081641

Meadows, Jennifer R S; Kidd, Jeffrey M; Wang, Guo-Dong; Parker, Heidi G; Schall, Peter Z; Bianchi, Matteo; Christmas, Matthew J; Bougiouri, Katia; Buckley, Reuben M; Hitte, Christophe; Nguyen, Anthony K; Wang, Chao; Jagannathan, Vidhya; Niskanen, Julia E; Frantz, Laurent A F; Arumilli, Meharji; Hundi, Sruthi; Lindblad-Toh, Kerstin; Ginja, Catarina; Agustina, Kadek Karang; ... (2023). Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture. Genome biology, 24(1), p. 187. BioMed Central Ltd. 10.1186/s13059-023-03023-7

Drögemüller, Michaela; Klein, Nadine; Steffensen, Rikke Lill; Keiner, Miriam; Jagannathan, Vidhya; Leeb, Tosso (2023). PKD1 Nonsense Variant in a Lagotto Romagnolo Family with Polycystic Kidney Disease. Genes, 14(6) MDPI, Molecular Diversity Preservation International 10.3390/genes14061210

Lourdes Frehner, Bianca; Christen, Matthias; Reichler, Iris M; Jagannathan, Vidhya; Novacco, Marilisa; Riond, Barbara; Peters, Laureen M; Suárez Sánchez-Andrade, José; Pieńkowska-Schelling, Aldona; Schelling, Claude; Kipar, Anja; Leeb, Tosso; Balogh, Orsolya (2023). Autosomal recessive hyposegmentation of granulocytes in Australian Shepherd Dogs indicates a role for LMBR1L in myeloid leukocytes. PLoS genetics, 19(6), e1010805. Public Library of Science 10.1371/journal.pgen.1010805

Gutierrez-Quintana, Rodrigo; Christen, Matthias; Faller, Kiterie M E; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso (2023). Response to letter regarding "SCN9A variant in a family of mixed breed dogs with congenital insensitivity to pain". Journal of veterinary internal medicine, 37(3), p. 793. Wiley 10.1111/jvim.16707

Kiener, Sarah; McMahill, Barbara G; Affolter, Verena K; Welle, Monika; Yager, Julie A; Jagannathan, Vidhya; Leeb, Tosso (2023). SOAT1 missense variant in two cats with sebaceous gland dysplasia. Molecular genetics and genomics : MGG, 298(4), pp. 837-843. Springer 10.1007/s00438-023-02020-6

Jenni, Sophia; Ludwig-Peisker, Odette; Jagannathan, Vidhya; Lapsina, Sandra; Stirn, Martina; Hofmann-Lehmann, Regina; Bogdanov, Nikolay; Schetle, Nelli; Giger, Urs; Leeb, Tosso; Bogdanova, Anna (2023). Methemoglobinemia, Increased Deformability and Reduced Membrane Stability of Red Blood Cells in a Cat with a CYB5R3 Splice Defect. Cells, 12(7) MDPI 10.3390/cells12070991

Letko, Anna; Hédan, Benoît; Snell, Anna; Harris, Alexander C; Jagannathan, Vidhya; Andersson, Göran; Holst, Bodil S; Ostrander, Elaine A; Quignon, Pascale; André, Catherine; Leeb, Tosso (2023). Genomic Diversity and Runs of Homozygosity in Bernese Mountain Dogs. Genes, 14(3) MDPI, Molecular Diversity Preservation International 10.3390/genes14030650

Christen, Matthias; Gonzalo-Nadal, Veronica; Kaczmarska, Adriana; Dyrka, Magdalena; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso; Gutierrez-Quintana, Rodrigo (2023). A novel missense variant in the L2HGDH gene in a cat with L-2-hydroxyglutaric aciduria and multicystic cerebral lesions. Journal of veterinary internal medicine, 37(2), pp. 676-680. Wiley 10.1111/jvim.16675

Gutierrez-Quintana, Rodrigo; Christen, Matthias; Faller, Kiterie M E; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso (2023). SCN9A variant in a family of mixed breed dogs with congenital insensitivity to pain. Journal of veterinary internal medicine, 37(1), pp. 230-235. Wiley 10.1111/jvim.16610

Hilton, Stephanie; Christen, Matthias; Bilzer, Thomas; Jagannathan, Vidhya; Leeb, Tosso; Giger, Urs (2023). Dystrophin (DMD) Missense Variant in Cats with Becker-Type Muscular Dystrophy. International journal of molecular sciences, 24(4), p. 3192. MDPI 10.3390/ijms24043192

Christen, Matthias; Ludwig-Peisker, Odette; Jagannathan, Vidhya; Hetzel, Udo; Schönball, Ulrike; Leeb, Tosso (2023). STK36 splice site variant in an Australian Shepherd dog with primary ciliary dyskinesia. Animal genetics, 54(3), pp. 412-415. Wiley 10.1111/age.13306

Dell'Apa, Diletta; Fumeo, Martina; Volta, Antonella; Bernardini, Marco; Fidanzio, Francesca; Buffagni, Valentina; Christen, Matthias; Jagannathan, Vidhya; Leeb, Tosso; Bianchi, Ezio (2023). Case report: Sacral agenesis in two boxer dogs: clinical presentation, diagnostic investigations, and outcome. Frontiers in veterinary science, 10, p. 1201484. Frontiers Media 10.3389/fvets.2023.1201484

Abitbol, Marie; Jagannathan, Vidhya; Laurent, Nelly; Noblet, Eglantine; Dutil, Guillaume F.; Troupel, Thibaut; de Dufaure de Citres, Caroline; Gache, Vincent; Blot, Stéphane; Escriou, Catherine; Leeb, Tosso (2022). A PNPLA8 frameshift variant in Australian shepherd dogs with hereditary ataxia. Animal genetics, 53(5), pp. 709-712. Wiley 10.1111/age.13245

Christen, Matthias; Gutierrez-Quintana, Rodrigo; Vandenberghe, Helene; Kaczmarska, Adriana; Penderis, Jacques; José-López, Roberto; Rupp, Angie; Griffiths, Ian R; Jagannathan, Vidhya; Leeb, Tosso (2022). Mitochondrial fission factor (MFF) frameshift variant in Bullmastiffs with mitochondrial fission encephalopathy. Animal genetics, 53(6), pp. 814-820. Wiley 10.1111/age.13263

Kiener, Sarah; Mauldin, Elizabeth A; Jagannathan, Vidhya; Casal, Margret L; Leeb, Tosso (2022). KRT5 missense variant in a Cardigan Welsh Corgi with epidermolysis bullosa simplex. Animal genetics, 53(6), pp. 892-896. Wiley 10.1111/age.13257

Kiener, Sarah; Chevallier, Lucie; Jagannathan, Vidhya; Briand, Amaury; Cochet-Faivre, Noëlle; Reyes-Gomez, Edouard; Leeb, Tosso (2022). A COL5A2 In-Frame Deletion in a Chihuahua with Ehlers-Danlos Syndrome. Genes, 13(5) MDPI, Molecular Diversity Preservation International 10.3390/genes13050934

Kiener, Sarah; Apostolopoulos, Neoklis; Schissler, Jennifer; Hass, Pascal-Kolja; Leuthard, Fabienne; Jagannathan, Vidhya; Schuppisser, Carole; Soto, Sara; Welle, Monika; Mayer, Ursula; Leeb, Tosso; Fischer, Nina M; Kaessmeyer, Sabine (2022). Independent COL5A1 Variant in Cats with Ehlers-Danlos Syndrome. Genes, 13(5), p. 797. MDPI, Molecular Diversity Preservation International 10.3390/genes13050797

Kiener, Sarah; Wiener, Dominique J; Hopke, Kaitlin; Diesel, Alison B; Jagannathan, Vidhya; Mauldin, Elizabeth A; Casal, Margret L; Leeb, Tosso (2022). ABHD5 frameshift deletion in Golden Retrievers with ichthyosis. G3 Genes Genomes Genetics, 12(2) Genetics Society of America 10.1093/g3journal/jkab397

Rudd Garces, Gabriela; Christen, Matthias; Loechel, Robert; Jagannathan, Vidhya; Leeb, Tosso (2022). FYCO1 Frameshift Deletion in Wirehaired Pointing Griffon Dogs with Juvenile Cataract. Genes, 13(2), p. 334. MDPI, Molecular Diversity Preservation International 10.3390/genes13020334

Kiener, Sarah; Rostaher, Ana; Rüfenacht, Silvia; Jagannathan, Vidhya; Sundberg, John P.; Welle, Monika; Leeb, Tosso (2022). Independent DSG4 frameshift variants in cats with hair shaft dystrophy. Molecular genetics and genomics : MGG, 297(1), pp. 147-154. Springer 10.1007/s00438-021-01842-6

Christen, Matthias; Rupp, Stefan; Van Soens, Iris; Bhatti, Sofie F. M.; Matiasek, Kaspar; von Klopmann, Thilo; Jagannathan, Vidhya; Madden, Indiana; Batcher, Kevin; Bannasch, Danika; Leeb, Tosso (2022). SLC25A12 Missense Variant in Nova Scotia Duck Tolling Retrievers Affected by Cerebellar Degeneration—Myositis Complex (CDMC). Genes, 13(7), p. 1223. MDPI, Molecular Diversity Preservation International 10.3390/genes13071223

Østergård Jensen, Sarah; Christen, Matthias; Rondahl, Veronica; Holland, Christopher T.; Jagannathan, Vidhya; Leeb, Tosso; Giger, Urs (2022). EHBP1L1 Frameshift Deletion in English Springer Spaniel Dogs with Dyserythropoietic Anemia and Myopathy Syndrome (DAMS) or Neonatal Losses. Genes, 13(9), p. 1533. MDPI, Molecular Diversity Preservation International 10.3390/genes13091533

Sage, Sophie Elena; Nicholson, Pamela; Leeb, Tosso; Gerber, Vinzenz; Jagannathan, Vidhya (2022). Long-Read Transcriptome of Equine Bronchoalveolar Cells. Genes, 13(10), p. 1722. MDPI, Molecular Diversity Preservation International 10.3390/genes13101722

Christen, Matthias; Bongers, Jos; Mathis, Déborah; Jagannathan, Vidya; Quintana, Rodrigo Gutierrez; Leeb, Tosso (2022). ACADM Frameshift Variant in Cavalier King Charles Spaniels with Medium-Chain Acyl-CoA Dehydrogenase Deficiency. Genes, 13(10), p. 1847. MDPI 10.3390/genes13101847

Affolter, Verena K; Kiener, Sarah; Jagannathan, Vidhya; Nagle, Terry; Leeb, Tosso (2022). A de novo variant in the keratin 1 gene (KRT1) in a Chinese shar-pei dog with severe congenital cornification disorder and non-epidermolytic ichthyosis. PLoS ONE, 17(10), e0275367. Public Library of Science 10.1371/journal.pone.0275367

Ludwig-Peisker, Odette; Ansel, Emily; Schweizer, Daniela; Jagannathan, Vidhya; Loechel, Robert; Leeb, Tosso (2022). PCYT1A Missense Variant in Vizslas with Disproportionate Dwarfism. Genes, 13(12), p. 2354. MDPI, Molecular Diversity Preservation International 10.3390/genes13122354

Christen, Matthias; Reineking, Wencke; Beineke, Andreas; Jagannathan, Vidhya; Baumgärtner, Wolfgang; Leeb, Tosso (2021). Polyadenine insertion disrupting the G6PC1 gene in German Pinschers with glycogen storage disease type Ia (GSD1A). Animal genetics, 52(6), pp. 900-902. Wiley 10.1111/age.13146

Christen, Matthias; Högler, Sandra; Kleiter, Miriam; Leschnik, Michael; Weber, Corinna; Thaller, Denise; Jagannathan, Vidya; Leeb, Tosso (2021). Deletion of the SELENOP gene leads to CNS atrophy with cerebellar ataxia in dogs. PLoS genetics, 17(8), e1009716. Public Library of Science 10.1371/journal.pgen.1009716

Balmer, Pierre; Hariton, William V. J.; Sayar, Beyza; Jagannathan, Vidhya; Galichet, Arnaud; Leeb, Tosso; Roosje, Petra; Müller, Eliane J. (2021). SUV39H2 epigenetic silencing controls fate conversion of epidermal stem and progenitor cells. Journal of cell biology, 220(4) Rockefeller Institute Press 10.1083/jcb.201908178

Gerber, Nadja; Brunner, Magdalena A. T.; Jagannathan, Vidya; Leeb, Tosso; Gerhards, Nora M.; Welle, Monika M.; Dettwiler, Martina (2021). Transcriptional Differences between Canine Cutaneous Epitheliotropic Lymphoma and Immune-Mediated Dermatoses. Genes, 12(2) MDPI, Molecular Diversity Preservation International 10.3390/genes12020160

Christen, Matthias; Janzen, Nils; Fraser, Anne; Sewell, Adrian C.; Jagannathan, Vidhya; Guevar, Julien; Leeb, Tosso; Sanchez-Masian, Daniel (2021). L2HGDH Missense Variant in a Cat with L-2-Hydroxyglutaric Aciduria. Genes, 12(5), p. 682. MDPI, Molecular Diversity Preservation International 10.3390/genes12050682

Kiener, Sarah; Cikota, Robert; Welle, Monika; Jagannathan, Vidhya; Åhman, Susanne; Leeb, Tosso (2021). A Missense Variant in SLC39A4 in a Litter of Turkish Van Cats with Acrodermatitis Enteropathica. Genes, 12(9), p. 1309. MDPI, Molecular Diversity Preservation International 10.3390/genes12091309

Christen, Matthias; de le Roi, Madeleine; Jagannathan, Vidhya; Becker, Kathrin; Leeb, Tosso (2021). MYO5A Frameshift Variant in a Miniature Dachshund with Coat Color Dilution and Neurological Defects Resembling Human Griscelli Syndrome Type 1. Genes, 12(10), p. 1479. MDPI, Molecular Diversity Preservation International 10.3390/genes12101479

Christen, Matthias; Booij-Vrieling, Henriëtte; Oksa-Minalto, Jelena; de Vries, Cynthia; Kehl, Alexandra; Jagannathan, Vidhya; Leeb, Tosso (2021). MIA3 Splice Defect in Cane Corso Dogs with Dental-Skeletal-Retinal Anomaly (DSRA). Genes, 12(10), p. 1497. MDPI, Molecular Diversity Preservation International 10.3390/genes12101497

Rudd Garces, Gabriela; Turba, Maria Elena; Muracchini, Myriam; Diana, Alessia; Jagannathan, Vidhya; Gentilini, Fabio; Leeb, Tosso (2021). PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism. Genes, 12(10), p. 1489. MDPI, Molecular Diversity Preservation International 10.3390/genes12101489

Christen, Matthias; Indzhova, Victoria; Guo, Ling T.; Jagannathan, Vidhya; Leeb, Tosso; Shelton, G. Diane; Brocal, Josep (2021). LAMA2 Nonsense Variant in an Italian Greyhound with Congenital Muscular Dystrophy. Genes, 12(11), p. 1823. MDPI, Molecular Diversity Preservation International 10.3390/genes12111823

Rudd Garces, Gabriela; Knebel, Anna; Hülskötter, Kirsten; Jagannathan, Vidhya; Störk, Theresa; Hewicker-Trautwein, Marion; Leeb, Tosso; Volk, Holger A. (2021). LTBP3 Frameshift Variant in British Shorthair Cats with Complex Skeletal Dysplasia. Genes, 12(12), p. 1923. MDPI, Molecular Diversity Preservation International 10.3390/genes12121923

Jeffries, Daniel Lee

Jeffries, Daniel L; Mee, Jonathan A; Peichel, Catherine L (2022). Identification of a candidate sex determination gene in Culaea inconstans suggests convergent recruitment of an Amh duplicate in two lineages of stickleback. Journal of evolutionary biology, 35(12), pp. 1683-1695. Wiley 10.1111/jeb.14034

Josephson, Matthew

Dagilis, Andrius J; Sardell, Jason M; Josephson, Matthew P; Su, Yiheng; Kirkpatrick, Mark; Peichel, Catherine L (2022). Searching for signatures of sexually antagonistic selection on stickleback sex chromosomes. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 377(1856), p. 20210205. Royal Society of London 10.1098/rstb.2021.0205

Sardell, Jason M; Josephson, Matthew P; Dalziel, Anne C; Peichel, Catherine L; Kirkpatrick, Mark (2021). Heterogeneous histories of recombination suppression on stickleback sex chromosomes. Molecular Biology and Evolution, 38(10), pp. 4403-4418. Oxford University Press 10.1093/molbev/msab179

Kaiser-Thom, Sarah

Hurni, J I; Kaiser-Thom, S; Gerber, V; Keller, J E; Collaud, A; Fernandez, J; Schwendener, S; Perreten, V (2022). Prevalence and whole genome-based phylogenetic, virulence and antibiotic ­resistance characteristics of nasal ­Staphylococcus aureus in healthy Swiss horses. Schweizer Archiv für Tierheilkunde, 164(7), pp. 499-512. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00360

Kaiser-Thom, Sarah; Gerber, Vinzenz; Collaud, Alexandra; Hurni, Joel; Perreten, Vincent (2022). Prevalence and WGS-based characteristics of Staphylococcus aureus in the nasal mucosa and pastern of horses with equine pastern dermatitis. BMC veterinary research, 18(1), p. 79. BioMed Central 10.1186/s12917-021-03053-y

Keller, Irene

Kiener, Sarah; Ribi, Camillo; Keller, Irene; Chizzolini, Carlo; Trendelenburg, Marten; Huynh-Do, Uyen; von Kempis, Johannes; Leeb, Tosso (2021). Variants Affecting the C-Terminal Tail of UNC93B1 Are Not a Common Risk Factor for Systemic Lupus Erythematosus. Genes, 12(8), p. 1268. MDPI, Molecular Diversity Preservation International 10.3390/genes12081268

Keller, Jennifer Eleonora

Keller, Jennifer Eleonora; Schwendener, Sybille; Nováková, Dana; Pantůček, Roman; Perreten, Vincent (2023). Novel Antimicrobial Genetic Elements in Methicillin-Resistant Macrococcus armenti. Microbial drug resistance, 29(2), pp. 65-68. Mary Ann Liebert 10.1089/mdr.2022.0162

Hurni, J I; Kaiser-Thom, S; Gerber, V; Keller, J E; Collaud, A; Fernandez, J; Schwendener, S; Perreten, V (2022). Prevalence and whole genome-based phylogenetic, virulence and antibiotic ­resistance characteristics of nasal ­Staphylococcus aureus in healthy Swiss horses. Schweizer Archiv für Tierheilkunde, 164(7), pp. 499-512. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00360

Keller, Jennifer Eleonora; Schwendener, Sybille; Neuenschwander, Jil; Overesch, Gudrun; Perreten, Vincent (2022). Prevalence and characterization of -methicillin-resistant Macrococcus spp. in food producing animals and meat in Switzerland in 2019. Schweizer Archiv für Tierheilkunde, 164(2), pp. 153-164. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00343

Keller, Jennifer Eleonora; Schwendener, Sybille; Overesch, Gudrun; Perreten, Vincent (2022). Macrococcus armenti sp. nov., a novel bacterium isolated from the skin and nasal cavities of healthy pigs and calves. International journal of systematic and evolutionary microbiology, 72(2) Society for General Microbiology SGM 10.1099/ijsem.0.005245

Kiener, Sarah

Kiener, Sarah; Åhman, Susanne; Cikota, Robert; Jagannathan, Vidhya; Blatter, Sohvi; Cvitas, Iva; Soto, Sara; Leeb, Tosso (2024). Heterozygous ASPRV1 frameshift variant in a Pembroke Welsh Corgi with ichthyosis. Animal genetics, 55(3), pp. 490-492. Wiley 10.1111/age.13423

Kaelin, Christopher B; McGowan, Kelly A; Hutcherson, Anthony D; Delay, John M; Li, Jeremiah H; Kiener, Sarah; Jagannathan, Vidhya; Leeb, Tosso; Murphy, William J; Barsh, Gregory S (2024). Ancestry dynamics and trait selection in a designer cat breed. Current biology, 34(7), 1506-1518.e7. Cell Press 10.1016/j.cub.2024.02.075

Kiener, Sarah; Åhman, Susanne; Jagannathan, Vidhya; Soto, Sara; Leeb, Tosso (2023). Heterozygous KRT10 missense variant in a Chihuahua with severe epidermolytic ichthyosis. Animal genetics, 54(5), pp. 652-654. Wiley 10.1111/age.13341

Simon, Rebecca; Kiener, Sarah; Thom, Nina; Schäfer, Laura; Müller, Janina; Schlohsarczyk, Elfi K; Gärtner, Ulrich; Herden, Christiane; Leeb, Tosso; Lühken, Gesine (2023). Identification of an ADAMTS2 frameshift variant in a cat family with Ehlers-Danlos syndrome. G3 Genes Genomes Genetics, 13(9) Genetics Society of America 10.1093/g3journal/jkad152

Kiener, Sarah; McMahill, Barbara G; Affolter, Verena K; Welle, Monika; Yager, Julie A; Jagannathan, Vidhya; Leeb, Tosso (2023). SOAT1 missense variant in two cats with sebaceous gland dysplasia. Molecular genetics and genomics : MGG, 298(4), pp. 837-843. Springer 10.1007/s00438-023-02020-6

Kiener, Sarah; Mauldin, Elizabeth A; Jagannathan, Vidhya; Casal, Margret L; Leeb, Tosso (2022). KRT5 missense variant in a Cardigan Welsh Corgi with epidermolysis bullosa simplex. Animal genetics, 53(6), pp. 892-896. Wiley 10.1111/age.13257

Kiener, Sarah; Chevallier, Lucie; Jagannathan, Vidhya; Briand, Amaury; Cochet-Faivre, Noëlle; Reyes-Gomez, Edouard; Leeb, Tosso (2022). A COL5A2 In-Frame Deletion in a Chihuahua with Ehlers-Danlos Syndrome. Genes, 13(5) MDPI, Molecular Diversity Preservation International 10.3390/genes13050934

Kiener, Sarah; Apostolopoulos, Neoklis; Schissler, Jennifer; Hass, Pascal-Kolja; Leuthard, Fabienne; Jagannathan, Vidhya; Schuppisser, Carole; Soto, Sara; Welle, Monika; Mayer, Ursula; Leeb, Tosso; Fischer, Nina M; Kaessmeyer, Sabine (2022). Independent COL5A1 Variant in Cats with Ehlers-Danlos Syndrome. Genes, 13(5), p. 797. MDPI, Molecular Diversity Preservation International 10.3390/genes13050797

Kiener, Sarah; Wiener, Dominique J; Hopke, Kaitlin; Diesel, Alison B; Jagannathan, Vidhya; Mauldin, Elizabeth A; Casal, Margret L; Leeb, Tosso (2022). ABHD5 frameshift deletion in Golden Retrievers with ichthyosis. G3 Genes Genomes Genetics, 12(2) Genetics Society of America 10.1093/g3journal/jkab397

Kiener, Sarah; Rostaher, Ana; Rüfenacht, Silvia; Jagannathan, Vidhya; Sundberg, John P.; Welle, Monika; Leeb, Tosso (2022). Independent DSG4 frameshift variants in cats with hair shaft dystrophy. Molecular genetics and genomics : MGG, 297(1), pp. 147-154. Springer 10.1007/s00438-021-01842-6

Affolter, Verena K; Kiener, Sarah; Jagannathan, Vidhya; Nagle, Terry; Leeb, Tosso (2022). A de novo variant in the keratin 1 gene (KRT1) in a Chinese shar-pei dog with severe congenital cornification disorder and non-epidermolytic ichthyosis. PLoS ONE, 17(10), e0275367. Public Library of Science 10.1371/journal.pone.0275367

Kiener, Sarah; Ribi, Camillo; Keller, Irene; Chizzolini, Carlo; Trendelenburg, Marten; Huynh-Do, Uyen; von Kempis, Johannes; Leeb, Tosso (2021). Variants Affecting the C-Terminal Tail of UNC93B1 Are Not a Common Risk Factor for Systemic Lupus Erythematosus. Genes, 12(8), p. 1268. MDPI, Molecular Diversity Preservation International 10.3390/genes12081268

Kiener, Sarah; Cikota, Robert; Welle, Monika; Jagannathan, Vidhya; Åhman, Susanne; Leeb, Tosso (2021). A Missense Variant in SLC39A4 in a Litter of Turkish Van Cats with Acrodermatitis Enteropathica. Genes, 12(9), p. 1309. MDPI, Molecular Diversity Preservation International 10.3390/genes12091309

Kittl, Sonja Cornelia

Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337

Aebi, Cindy Bianca; Fernandez, Javier Eduardo; Kittl, Sonja Cornelia; Tresch, Milena Laura; Perreten, Vincent; Overesch, Gudrun (2023). Characterization of third-generation cephalosporin-resistant Escherichia coli from slaughter calves and fattening pigs: A pilot study for monitoring antimicrobial resistance by whole genome sequencing in Switzerland. Schweizer Archiv für Tierheilkunde, 165(6), pp. 372-384. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00396

Brilhante, Michael; Gobeli Brawand, Stefanie; Endimiani, Andrea; Rohrbach, Helene; Kittl, Sonja; Willi, Barbara; Schuller, Simone; Perreten, Vincent (2021). Two high-risk clones of carbapenemase-producing Klebsiella pneumoniae that cause infections in pets and are present in the environment of a veterinary referral hospital. Journal of antimicrobial chemotherapy, 76(5), pp. 1140-1149. Oxford University Press 10.1093/jac/dkab028

Klenke, Frank M.

Safari, Fatemeh; Yeoh, Wen Jie; Perret-Gentil, Saskia; Klenke, Frank; Dolder, Silvia; Hofstetter, Wilhelm; Krebs, Philippe (2024). SHIP1 deficiency causes inflammation-dependent retardation in skeletal growth. Life science alliance, 7(5) EMBO Press 10.26508/lsa.202302297

Koch, Michel Christoph

Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501

Krebs, Philippe

Safari, Fatemeh; Yeoh, Wen Jie; Perret-Gentil, Saskia; Klenke, Frank; Dolder, Silvia; Hofstetter, Wilhelm; Krebs, Philippe (2024). SHIP1 deficiency causes inflammation-dependent retardation in skeletal growth. Life science alliance, 7(5) EMBO Press 10.26508/lsa.202302297

Ennis, Sarah; Conforte, Alessandra; O'Reilly, Eimear; Takanlu, Javid Sabour; Cichocka, Tatiana; Dhami, Sukhraj Pal; Nicholson, Pamela; Krebs, Philippe; Ó Broin, Pilib; Szegezdi, Eva (2023). Cell-cell interactome of the hematopoietic niche and its changes in acute myeloid leukemia. iScience, 26(6), p. 106943. Elsevier 10.1016/j.isci.2023.106943

Kässmeyer, Sabine

Kiener, Sarah; Apostolopoulos, Neoklis; Schissler, Jennifer; Hass, Pascal-Kolja; Leuthard, Fabienne; Jagannathan, Vidhya; Schuppisser, Carole; Soto, Sara; Welle, Monika; Mayer, Ursula; Leeb, Tosso; Fischer, Nina M; Kaessmeyer, Sabine (2022). Independent COL5A1 Variant in Cats with Ehlers-Danlos Syndrome. Genes, 13(5), p. 797. MDPI, Molecular Diversity Preservation International 10.3390/genes13050797

Leeb, Tosso

Kiener, Sarah; Åhman, Susanne; Cikota, Robert; Jagannathan, Vidhya; Blatter, Sohvi; Cvitas, Iva; Soto, Sara; Leeb, Tosso (2024). Heterozygous ASPRV1 frameshift variant in a Pembroke Welsh Corgi with ichthyosis. Animal genetics, 55(3), pp. 490-492. Wiley 10.1111/age.13423

Kaelin, Christopher B; McGowan, Kelly A; Hutcherson, Anthony D; Delay, John M; Li, Jeremiah H; Kiener, Sarah; Jagannathan, Vidhya; Leeb, Tosso; Murphy, William J; Barsh, Gregory S (2024). Ancestry dynamics and trait selection in a designer cat breed. Current biology, 34(7), 1506-1518.e7. Cell Press 10.1016/j.cub.2024.02.075

Sage, Sophie E.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2024). Single-cell profiling of bronchoalveolar cells reveals a Th17 signature in neutrophilic severe equine asthma. Immunology, 171(4), pp. 549-565. Wiley-Blackwell 10.1111/imm.13745

Christen, Matthias; Gregor, Anne; Gutierrez-Quintana, Rodrigo; Bongers, Jos; Rupp, Angie; Penderis, Jacques; Shelton, G Diane; Jagannathan, Vidhya; Zweier, Christiane; Leeb, Tosso (2024). NDUFS7 variant in dogs with Leigh syndrome and its functional validation in a Drosophila melanogaster model. Scientific Reports, 14(2975) Nature Publishing Group 10.1038/s41598-024-53314-7

Rawson, Faye; Christen, Matthias; Rose, Jeremy; Paran, Emilie; Leeb, Tosso; Fadda, Angela (2024). Polioencephalopathy in Eurasier dogs. Journal of veterinary internal medicine, 38(1), pp. 277-284. Wiley 10.1111/jvim.16945

Kiener, Sarah; Åhman, Susanne; Jagannathan, Vidhya; Soto, Sara; Leeb, Tosso (2023). Heterozygous KRT10 missense variant in a Chihuahua with severe epidermolytic ichthyosis. Animal genetics, 54(5), pp. 652-654. Wiley 10.1111/age.13341

Simon, Rebecca; Kiener, Sarah; Thom, Nina; Schäfer, Laura; Müller, Janina; Schlohsarczyk, Elfi K; Gärtner, Ulrich; Herden, Christiane; Leeb, Tosso; Lühken, Gesine (2023). Identification of an ADAMTS2 frameshift variant in a cat family with Ehlers-Danlos syndrome. G3 Genes Genomes Genetics, 13(9) Genetics Society of America 10.1093/g3journal/jkad152

Brunetti, Barbara; Bacci, Barbara; Abbate, Jessica Maria; Tura, Giorgia; Paciello, Orlando; Vaccaro, Emanuela; Prisco, Francesco; Gandini, Gualtiero; Okonji, Samuel; Paola, Andrea di; Letko, Anna; Drögemüller, Cord; Jagannathan, Vidhya; Turba, Maria Elena; Ogundipe, Tolulope Grace; Lorenzini, Luca; Rosati, Marco; Psalla, Dimitra; Leeb, Tosso and Drögemüller, Michaela (2023). SGCD Missense Variant in a Lagotto Romagnolo Dog with Autosomal Recessively Inherited Limb-Girdle Muscular Dystrophy. Genes, 14(8) MDPI, Molecular Diversity Preservation International 10.3390/genes14081641

Meadows, Jennifer R S; Kidd, Jeffrey M; Wang, Guo-Dong; Parker, Heidi G; Schall, Peter Z; Bianchi, Matteo; Christmas, Matthew J; Bougiouri, Katia; Buckley, Reuben M; Hitte, Christophe; Nguyen, Anthony K; Wang, Chao; Jagannathan, Vidhya; Niskanen, Julia E; Frantz, Laurent A F; Arumilli, Meharji; Hundi, Sruthi; Lindblad-Toh, Kerstin; Ginja, Catarina; Agustina, Kadek Karang; ... (2023). Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture. Genome biology, 24(1), p. 187. BioMed Central Ltd. 10.1186/s13059-023-03023-7

Christen, Matthias; Zdora, Isabel; Leschnik, Michael; Jagannathan, Vidhya; Puff, Christina; Hünerfauth, Enrice; Volk, Holger A; Baumgärtner, Wolfgang; Koch, Tessa C; Schäfer, Wencke; Kleiter, Miriam; Leeb, Tosso (2023). RALGAPA1 Deletion in Belgian Shepherd Dogs with Cerebellar Ataxia. Genes, 14(8) MDPI, Molecular Diversity Preservation International 10.3390/genes14081520

Drögemüller, Michaela; Klein, Nadine; Steffensen, Rikke Lill; Keiner, Miriam; Jagannathan, Vidhya; Leeb, Tosso (2023). PKD1 Nonsense Variant in a Lagotto Romagnolo Family with Polycystic Kidney Disease. Genes, 14(6) MDPI, Molecular Diversity Preservation International 10.3390/genes14061210

Lourdes Frehner, Bianca; Christen, Matthias; Reichler, Iris M; Jagannathan, Vidhya; Novacco, Marilisa; Riond, Barbara; Peters, Laureen M; Suárez Sánchez-Andrade, José; Pieńkowska-Schelling, Aldona; Schelling, Claude; Kipar, Anja; Leeb, Tosso; Balogh, Orsolya (2023). Autosomal recessive hyposegmentation of granulocytes in Australian Shepherd Dogs indicates a role for LMBR1L in myeloid leukocytes. PLoS genetics, 19(6), e1010805. Public Library of Science 10.1371/journal.pgen.1010805

Gutierrez-Quintana, Rodrigo; Christen, Matthias; Faller, Kiterie M E; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso (2023). Response to letter regarding "SCN9A variant in a family of mixed breed dogs with congenital insensitivity to pain". Journal of veterinary internal medicine, 37(3), p. 793. Wiley 10.1111/jvim.16707

Kiener, Sarah; McMahill, Barbara G; Affolter, Verena K; Welle, Monika; Yager, Julie A; Jagannathan, Vidhya; Leeb, Tosso (2023). SOAT1 missense variant in two cats with sebaceous gland dysplasia. Molecular genetics and genomics : MGG, 298(4), pp. 837-843. Springer 10.1007/s00438-023-02020-6

Jenni, Sophia; Ludwig-Peisker, Odette; Jagannathan, Vidhya; Lapsina, Sandra; Stirn, Martina; Hofmann-Lehmann, Regina; Bogdanov, Nikolay; Schetle, Nelli; Giger, Urs; Leeb, Tosso; Bogdanova, Anna (2023). Methemoglobinemia, Increased Deformability and Reduced Membrane Stability of Red Blood Cells in a Cat with a CYB5R3 Splice Defect. Cells, 12(7) MDPI 10.3390/cells12070991

Letko, Anna; Hédan, Benoît; Snell, Anna; Harris, Alexander C; Jagannathan, Vidhya; Andersson, Göran; Holst, Bodil S; Ostrander, Elaine A; Quignon, Pascale; André, Catherine; Leeb, Tosso (2023). Genomic Diversity and Runs of Homozygosity in Bernese Mountain Dogs. Genes, 14(3) MDPI, Molecular Diversity Preservation International 10.3390/genes14030650

Christen, Matthias; Gonzalo-Nadal, Veronica; Kaczmarska, Adriana; Dyrka, Magdalena; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso; Gutierrez-Quintana, Rodrigo (2023). A novel missense variant in the L2HGDH gene in a cat with L-2-hydroxyglutaric aciduria and multicystic cerebral lesions. Journal of veterinary internal medicine, 37(2), pp. 676-680. Wiley 10.1111/jvim.16675

Abitbol, Marie; Jagannathan, Vidhya; Lopez, Marie; Courtin, Ambre; Dufaure de Citres, Caroline; Gache, Vincent; Leeb, Tosso (2023). A CDH23 missense variant in Beauceron dogs with non-syndromic deafness. Animal genetics, 54(1), pp. 73-77. Wiley 10.1111/age.13273

Gutierrez-Quintana, Rodrigo; Christen, Matthias; Faller, Kiterie M E; Guevar, Julien; Jagannathan, Vidhya; Leeb, Tosso (2023). SCN9A variant in a family of mixed breed dogs with congenital insensitivity to pain. Journal of veterinary internal medicine, 37(1), pp. 230-235. Wiley 10.1111/jvim.16610

Hilton, Stephanie; Christen, Matthias; Bilzer, Thomas; Jagannathan, Vidhya; Leeb, Tosso; Giger, Urs (2023). Dystrophin (DMD) Missense Variant in Cats with Becker-Type Muscular Dystrophy. International journal of molecular sciences, 24(4), p. 3192. MDPI 10.3390/ijms24043192

Christen, Matthias; Ludwig-Peisker, Odette; Jagannathan, Vidhya; Hetzel, Udo; Schönball, Ulrike; Leeb, Tosso (2023). STK36 splice site variant in an Australian Shepherd dog with primary ciliary dyskinesia. Animal genetics, 54(3), pp. 412-415. Wiley 10.1111/age.13306

Dell'Apa, Diletta; Fumeo, Martina; Volta, Antonella; Bernardini, Marco; Fidanzio, Francesca; Buffagni, Valentina; Christen, Matthias; Jagannathan, Vidhya; Leeb, Tosso; Bianchi, Ezio (2023). Case report: Sacral agenesis in two boxer dogs: clinical presentation, diagnostic investigations, and outcome. Frontiers in veterinary science, 10, p. 1201484. Frontiers Media 10.3389/fvets.2023.1201484

Abitbol, Marie; Jagannathan, Vidhya; Laurent, Nelly; Noblet, Eglantine; Dutil, Guillaume F.; Troupel, Thibaut; de Dufaure de Citres, Caroline; Gache, Vincent; Blot, Stéphane; Escriou, Catherine; Leeb, Tosso (2022). A PNPLA8 frameshift variant in Australian shepherd dogs with hereditary ataxia. Animal genetics, 53(5), pp. 709-712. Wiley 10.1111/age.13245

Christen, Matthias; Gutierrez-Quintana, Rodrigo; Vandenberghe, Helene; Kaczmarska, Adriana; Penderis, Jacques; José-López, Roberto; Rupp, Angie; Griffiths, Ian R; Jagannathan, Vidhya; Leeb, Tosso (2022). Mitochondrial fission factor (MFF) frameshift variant in Bullmastiffs with mitochondrial fission encephalopathy. Animal genetics, 53(6), pp. 814-820. Wiley 10.1111/age.13263

Kiener, Sarah; Mauldin, Elizabeth A; Jagannathan, Vidhya; Casal, Margret L; Leeb, Tosso (2022). KRT5 missense variant in a Cardigan Welsh Corgi with epidermolysis bullosa simplex. Animal genetics, 53(6), pp. 892-896. Wiley 10.1111/age.13257

Kiener, Sarah; Chevallier, Lucie; Jagannathan, Vidhya; Briand, Amaury; Cochet-Faivre, Noëlle; Reyes-Gomez, Edouard; Leeb, Tosso (2022). A COL5A2 In-Frame Deletion in a Chihuahua with Ehlers-Danlos Syndrome. Genes, 13(5) MDPI, Molecular Diversity Preservation International 10.3390/genes13050934

Kiener, Sarah; Apostolopoulos, Neoklis; Schissler, Jennifer; Hass, Pascal-Kolja; Leuthard, Fabienne; Jagannathan, Vidhya; Schuppisser, Carole; Soto, Sara; Welle, Monika; Mayer, Ursula; Leeb, Tosso; Fischer, Nina M; Kaessmeyer, Sabine (2022). Independent COL5A1 Variant in Cats with Ehlers-Danlos Syndrome. Genes, 13(5), p. 797. MDPI, Molecular Diversity Preservation International 10.3390/genes13050797

Kiener, Sarah; Wiener, Dominique J; Hopke, Kaitlin; Diesel, Alison B; Jagannathan, Vidhya; Mauldin, Elizabeth A; Casal, Margret L; Leeb, Tosso (2022). ABHD5 frameshift deletion in Golden Retrievers with ichthyosis. G3 Genes Genomes Genetics, 12(2) Genetics Society of America 10.1093/g3journal/jkab397

Rudd Garces, Gabriela; Christen, Matthias; Loechel, Robert; Jagannathan, Vidhya; Leeb, Tosso (2022). FYCO1 Frameshift Deletion in Wirehaired Pointing Griffon Dogs with Juvenile Cataract. Genes, 13(2), p. 334. MDPI, Molecular Diversity Preservation International 10.3390/genes13020334

Signer-Hasler, Heidi; Henkel, Jan; Bangerter, Erika; Bulut, Zafer; Drögemüller, Cord; Leeb, Tosso; Flury, Christine (2022). Runs of homozygosity in Swiss goats reveal genetic changes associated with domestication and modern selection. Genetics, selection, evolution, 54(1), p. 6. BioMed Central 10.1186/s12711-022-00695-w

Kiener, Sarah; Rostaher, Ana; Rüfenacht, Silvia; Jagannathan, Vidhya; Sundberg, John P.; Welle, Monika; Leeb, Tosso (2022). Independent DSG4 frameshift variants in cats with hair shaft dystrophy. Molecular genetics and genomics : MGG, 297(1), pp. 147-154. Springer 10.1007/s00438-021-01842-6

Christen, Matthias; Rupp, Stefan; Van Soens, Iris; Bhatti, Sofie F. M.; Matiasek, Kaspar; von Klopmann, Thilo; Jagannathan, Vidhya; Madden, Indiana; Batcher, Kevin; Bannasch, Danika; Leeb, Tosso (2022). SLC25A12 Missense Variant in Nova Scotia Duck Tolling Retrievers Affected by Cerebellar Degeneration—Myositis Complex (CDMC). Genes, 13(7), p. 1223. MDPI, Molecular Diversity Preservation International 10.3390/genes13071223

Cvitas, Iva; Oberhaensli, Simone; Leeb, Tosso; Marti, Eliane (2022). Equine keratinocytes in the pathogenesis of insect bite hypersensitivity: Just another brick in the wall? PLoS ONE, 17(8), e0266263. Public Library of Science 10.1371/journal.pone.0266263

Sage, Sophie E.; Nicholson, Pamela; Peters, Laureen M.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2022). Single-cell gene expression analysis of cryopreserved equine bronchoalveolar cells (In Press). Frontiers in immunology, 13 Frontiers Research Foundation 10.3389/fimmu.2022.929922

Østergård Jensen, Sarah; Christen, Matthias; Rondahl, Veronica; Holland, Christopher T.; Jagannathan, Vidhya; Leeb, Tosso; Giger, Urs (2022). EHBP1L1 Frameshift Deletion in English Springer Spaniel Dogs with Dyserythropoietic Anemia and Myopathy Syndrome (DAMS) or Neonatal Losses. Genes, 13(9), p. 1533. MDPI, Molecular Diversity Preservation International 10.3390/genes13091533

Sage, Sophie Elena; Nicholson, Pamela; Leeb, Tosso; Gerber, Vinzenz; Jagannathan, Vidhya (2022). Long-Read Transcriptome of Equine Bronchoalveolar Cells. Genes, 13(10), p. 1722. MDPI, Molecular Diversity Preservation International 10.3390/genes13101722

Christen, Matthias; Bongers, Jos; Mathis, Déborah; Jagannathan, Vidya; Quintana, Rodrigo Gutierrez; Leeb, Tosso (2022). ACADM Frameshift Variant in Cavalier King Charles Spaniels with Medium-Chain Acyl-CoA Dehydrogenase Deficiency. Genes, 13(10), p. 1847. MDPI 10.3390/genes13101847

Affolter, Verena K; Kiener, Sarah; Jagannathan, Vidhya; Nagle, Terry; Leeb, Tosso (2022). A de novo variant in the keratin 1 gene (KRT1) in a Chinese shar-pei dog with severe congenital cornification disorder and non-epidermolytic ichthyosis. PLoS ONE, 17(10), e0275367. Public Library of Science 10.1371/journal.pone.0275367

Ludwig-Peisker, Odette; Ansel, Emily; Schweizer, Daniela; Jagannathan, Vidhya; Loechel, Robert; Leeb, Tosso (2022). PCYT1A Missense Variant in Vizslas with Disproportionate Dwarfism. Genes, 13(12), p. 2354. MDPI, Molecular Diversity Preservation International 10.3390/genes13122354

Christen, Matthias; Reineking, Wencke; Beineke, Andreas; Jagannathan, Vidhya; Baumgärtner, Wolfgang; Leeb, Tosso (2021). Polyadenine insertion disrupting the G6PC1 gene in German Pinschers with glycogen storage disease type Ia (GSD1A). Animal genetics, 52(6), pp. 900-902. Wiley 10.1111/age.13146

Bannasch, Danika L.; Kaelin, Christopher B; Letko, Anna; Loechel, Robert; Hug, Petra; Jagannathan, Vidhya; Henkel, Jan; Roosje, Petra; Hytönen, Marjo K; Lohi, Hannes; Arumilli, Meharji; Minor, Katie M; Mickelson, James R; Drögemüller, Cord; Barsh, Gregory S; Leeb, Tosso (2021). Dog colour patterns explained by modular promoters of ancient canid origin. Nature ecology & evolution, 5(10), pp. 1415-1423. Nature Publishing Group 10.1038/s41559-021-01524-x

Christen, Matthias; Högler, Sandra; Kleiter, Miriam; Leschnik, Michael; Weber, Corinna; Thaller, Denise; Jagannathan, Vidya; Leeb, Tosso (2021). Deletion of the SELENOP gene leads to CNS atrophy with cerebellar ataxia in dogs. PLoS genetics, 17(8), e1009716. Public Library of Science 10.1371/journal.pgen.1009716

Henkel, Jan; Dubacher, Alexandra; Bangerter, Erika; Herren, Ursula; Ammann, Philippe; Drögemüller, Cord; Flury, Christine; Leeb, Tosso (2021). Introgression of ASIP and TYRP1 Alleles Explains Coat Color Variation in Valais Goats. Journal of heredity, 112(5), pp. 452-457. Oxford University Press 10.1093/jhered/esab024

Quitt, Pia R; Brühschwein, Andreas; Matiasek, Kaspar; Wielaender, Franziska; Karkamo, Veera; Hytönen, Marjo K; Meyer-Lindenberg, Andrea; Dengler, Berett; Leeb, Tosso; Lohi, Hannes; Fischer, Andrea (2021). A hypomyelinating leukodystrophy in German Shepherd dogs. Journal of veterinary internal medicine, 35(3), pp. 1455-1465. Wiley-Blackwell 10.1111/jvim.16085

Balmer, Pierre; Hariton, William V. J.; Sayar, Beyza; Jagannathan, Vidhya; Galichet, Arnaud; Leeb, Tosso; Roosje, Petra; Müller, Eliane J. (2021). SUV39H2 epigenetic silencing controls fate conversion of epidermal stem and progenitor cells. Journal of cell biology, 220(4) Rockefeller Institute Press 10.1083/jcb.201908178

O’Toole, Donal; Häfliger, Irene M.; Leuthard, Fabienne; Schumaker, Brant; Steadman, Lynn; Murphy, Brian; Drögemüller, Cord; Leeb, Tosso (2021). X-Linked Hypohidrotic Ectodermal Dysplasia in Crossbred Beef Cattle Due to a Large Deletion in EDA. Animals, 11(3), p. 657. MDPI 10.3390/ani11030657

Gerber, Nadja; Brunner, Magdalena A. T.; Jagannathan, Vidya; Leeb, Tosso; Gerhards, Nora M.; Welle, Monika M.; Dettwiler, Martina (2021). Transcriptional Differences between Canine Cutaneous Epitheliotropic Lymphoma and Immune-Mediated Dermatoses. Genes, 12(2) MDPI, Molecular Diversity Preservation International 10.3390/genes12020160

Christen, Matthias; Janzen, Nils; Fraser, Anne; Sewell, Adrian C.; Jagannathan, Vidhya; Guevar, Julien; Leeb, Tosso; Sanchez-Masian, Daniel (2021). L2HGDH Missense Variant in a Cat with L-2-Hydroxyglutaric Aciduria. Genes, 12(5), p. 682. MDPI, Molecular Diversity Preservation International 10.3390/genes12050682

Kiener, Sarah; Ribi, Camillo; Keller, Irene; Chizzolini, Carlo; Trendelenburg, Marten; Huynh-Do, Uyen; von Kempis, Johannes; Leeb, Tosso (2021). Variants Affecting the C-Terminal Tail of UNC93B1 Are Not a Common Risk Factor for Systemic Lupus Erythematosus. Genes, 12(8), p. 1268. MDPI, Molecular Diversity Preservation International 10.3390/genes12081268

Kiener, Sarah; Cikota, Robert; Welle, Monika; Jagannathan, Vidhya; Åhman, Susanne; Leeb, Tosso (2021). A Missense Variant in SLC39A4 in a Litter of Turkish Van Cats with Acrodermatitis Enteropathica. Genes, 12(9), p. 1309. MDPI, Molecular Diversity Preservation International 10.3390/genes12091309

Christen, Matthias; de le Roi, Madeleine; Jagannathan, Vidhya; Becker, Kathrin; Leeb, Tosso (2021). MYO5A Frameshift Variant in a Miniature Dachshund with Coat Color Dilution and Neurological Defects Resembling Human Griscelli Syndrome Type 1. Genes, 12(10), p. 1479. MDPI, Molecular Diversity Preservation International 10.3390/genes12101479

Christen, Matthias; Booij-Vrieling, Henriëtte; Oksa-Minalto, Jelena; de Vries, Cynthia; Kehl, Alexandra; Jagannathan, Vidhya; Leeb, Tosso (2021). MIA3 Splice Defect in Cane Corso Dogs with Dental-Skeletal-Retinal Anomaly (DSRA). Genes, 12(10), p. 1497. MDPI, Molecular Diversity Preservation International 10.3390/genes12101497

Rudd Garces, Gabriela; Turba, Maria Elena; Muracchini, Myriam; Diana, Alessia; Jagannathan, Vidhya; Gentilini, Fabio; Leeb, Tosso (2021). PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism. Genes, 12(10), p. 1489. MDPI, Molecular Diversity Preservation International 10.3390/genes12101489

Christen, Matthias; Indzhova, Victoria; Guo, Ling T.; Jagannathan, Vidhya; Leeb, Tosso; Shelton, G. Diane; Brocal, Josep (2021). LAMA2 Nonsense Variant in an Italian Greyhound with Congenital Muscular Dystrophy. Genes, 12(11), p. 1823. MDPI, Molecular Diversity Preservation International 10.3390/genes12111823

Rudd Garces, Gabriela; Knebel, Anna; Hülskötter, Kirsten; Jagannathan, Vidhya; Störk, Theresa; Hewicker-Trautwein, Marion; Leeb, Tosso; Volk, Holger A. (2021). LTBP3 Frameshift Variant in British Shorthair Cats with Complex Skeletal Dysplasia. Genes, 12(12), p. 1923. MDPI, Molecular Diversity Preservation International 10.3390/genes12121923

Letko, Anna

Brunetti, Barbara; Bacci, Barbara; Abbate, Jessica Maria; Tura, Giorgia; Paciello, Orlando; Vaccaro, Emanuela; Prisco, Francesco; Gandini, Gualtiero; Okonji, Samuel; Paola, Andrea di; Letko, Anna; Drögemüller, Cord; Jagannathan, Vidhya; Turba, Maria Elena; Ogundipe, Tolulope Grace; Lorenzini, Luca; Rosati, Marco; Psalla, Dimitra; Leeb, Tosso and Drögemüller, Michaela (2023). SGCD Missense Variant in a Lagotto Romagnolo Dog with Autosomal Recessively Inherited Limb-Girdle Muscular Dystrophy. Genes, 14(8) MDPI, Molecular Diversity Preservation International 10.3390/genes14081641

Letko, Anna; Hédan, Benoît; Snell, Anna; Harris, Alexander C; Jagannathan, Vidhya; Andersson, Göran; Holst, Bodil S; Ostrander, Elaine A; Quignon, Pascale; André, Catherine; Leeb, Tosso (2023). Genomic Diversity and Runs of Homozygosity in Bernese Mountain Dogs. Genes, 14(3) MDPI, Molecular Diversity Preservation International 10.3390/genes14030650

Bannasch, Danika L.; Kaelin, Christopher B; Letko, Anna; Loechel, Robert; Hug, Petra; Jagannathan, Vidhya; Henkel, Jan; Roosje, Petra; Hytönen, Marjo K; Lohi, Hannes; Arumilli, Meharji; Minor, Katie M; Mickelson, James R; Drögemüller, Cord; Barsh, Gregory S; Leeb, Tosso (2021). Dog colour patterns explained by modular promoters of ancient canid origin. Nature ecology & evolution, 5(10), pp. 1415-1423. Nature Publishing Group 10.1038/s41559-021-01524-x

Leuthard, Fabienne Nadja

Kiener, Sarah; Apostolopoulos, Neoklis; Schissler, Jennifer; Hass, Pascal-Kolja; Leuthard, Fabienne; Jagannathan, Vidhya; Schuppisser, Carole; Soto, Sara; Welle, Monika; Mayer, Ursula; Leeb, Tosso; Fischer, Nina M; Kaessmeyer, Sabine (2022). Independent COL5A1 Variant in Cats with Ehlers-Danlos Syndrome. Genes, 13(5), p. 797. MDPI, Molecular Diversity Preservation International 10.3390/genes13050797

O’Toole, Donal; Häfliger, Irene M.; Leuthard, Fabienne; Schumaker, Brant; Steadman, Lynn; Murphy, Brian; Drögemüller, Cord; Leeb, Tosso (2021). X-Linked Hypohidrotic Ectodermal Dysplasia in Crossbred Beef Cattle Due to a Large Deletion in EDA. Animals, 11(3), p. 657. MDPI 10.3390/ani11030657

Liu, Zuyao

Liu, Zuyao; Roesti, Marius; Marques, David; Hiltbrunner, Melanie; Saladin, Verena; Peichel, Catherine L (2021). Chromosomal fusions facilitate adaptation to divergent environments in threespine stickleback (Submitted). Molecular Biology and Evolution Oxford University Press 10.1093/molbev/msab358

Ludwig, Odette Hanna Alison

Christen, Matthias; Ludwig-Peisker, Odette; Jagannathan, Vidhya; Hetzel, Udo; Schönball, Ulrike; Leeb, Tosso (2023). STK36 splice site variant in an Australian Shepherd dog with primary ciliary dyskinesia. Animal genetics, 54(3), pp. 412-415. Wiley 10.1111/age.13306

Ludwig-Peisker, Odette; Ansel, Emily; Schweizer, Daniela; Jagannathan, Vidhya; Loechel, Robert; Leeb, Tosso (2022). PCYT1A Missense Variant in Vizslas with Disproportionate Dwarfism. Genes, 13(12), p. 2354. MDPI, Molecular Diversity Preservation International 10.3390/genes13122354

Ludwig-Peisker, Odette Hanna Alison

Jenni, Sophia; Ludwig-Peisker, Odette; Jagannathan, Vidhya; Lapsina, Sandra; Stirn, Martina; Hofmann-Lehmann, Regina; Bogdanov, Nikolay; Schetle, Nelli; Giger, Urs; Leeb, Tosso; Bogdanova, Anna (2023). Methemoglobinemia, Increased Deformability and Reduced Membrane Stability of Red Blood Cells in a Cat with a CYB5R3 Splice Defect. Cells, 12(7) MDPI 10.3390/cells12070991

Marchionatti, Emma

Marchionatti, Emma; Perreten, Vincent (2023). Novel macrolide-lincosamide-streptogramin B resistance gene erm(56) in Trueperella pyogenes. mSphere, 8(4), e0023923. American Society for Microbiology 10.1128/msphere.00239-23

Marchionatti, Emma; Perreten, Vincent (2022). Whole-Genome Sequences of Antibiotic-Resistant Trueperella pyogenes Isolates from Surgical Site Infections in Dairy Cows in Switzerland. Microbiology resource announcements, 11(12), e0086522. American Society for Microbiology 10.1128/mra.00865-22

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De-Kayne, Rishi; Selz, Oliver M; Marques, David A; Frei, David; Seehausen, Ole; Feulner, Philine G D (2022). Genomic architecture of adaptive radiation and hybridization in Alpine whitefish. Nature Communications, 13(1), p. 4479. Springer Nature 10.1038/s41467-022-32181-8

Liu, Zuyao; Roesti, Marius; Marques, David; Hiltbrunner, Melanie; Saladin, Verena; Peichel, Catherine L (2021). Chromosomal fusions facilitate adaptation to divergent environments in threespine stickleback (Submitted). Molecular Biology and Evolution Oxford University Press 10.1093/molbev/msab358

Marti, Eliane Isabelle

Cvitas, Iva; Oberhaensli, Simone; Leeb, Tosso; Marti, Eliane (2022). Equine keratinocytes in the pathogenesis of insect bite hypersensitivity: Just another brick in the wall? PLoS ONE, 17(8), e0266263. Public Library of Science 10.1371/journal.pone.0266263

Mathis, Déborah

Christen, Matthias; Bongers, Jos; Mathis, Déborah; Jagannathan, Vidya; Quintana, Rodrigo Gutierrez; Leeb, Tosso (2022). ACADM Frameshift Variant in Cavalier King Charles Spaniels with Medium-Chain Acyl-CoA Dehydrogenase Deficiency. Genes, 13(10), p. 1847. MDPI 10.3390/genes13101847

Meylan, Mireille

Becker, Jens; Fernandez, Javier E; Rossano, Alexandra; Meylan, Mireille; Perreten, Vincent (2022). Clonal dissemination of MDR Pasteurella multocida ST79 in a small Swiss veal calf farm with high use of antibiotics. The journal of antimicrobial chemotherapy, 77(10), pp. 2886-2888. Oxford University Press 10.1093/jac/dkac270

Müller, Eliane Jasmine

Balmer, Pierre; Hariton, William V. J.; Sayar, Beyza; Jagannathan, Vidhya; Galichet, Arnaud; Leeb, Tosso; Roosje, Petra; Müller, Eliane J. (2021). SUV39H2 epigenetic silencing controls fate conversion of epidermal stem and progenitor cells. Journal of cell biology, 220(4) Rockefeller Institute Press 10.1083/jcb.201908178

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Keller, Jennifer Eleonora; Schwendener, Sybille; Neuenschwander, Jil; Overesch, Gudrun; Perreten, Vincent (2022). Prevalence and characterization of -methicillin-resistant Macrococcus spp. in food producing animals and meat in Switzerland in 2019. Schweizer Archiv für Tierheilkunde, 164(2), pp. 153-164. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00343

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Ennis, Sarah; Conforte, Alessandra; O'Reilly, Eimear; Takanlu, Javid Sabour; Cichocka, Tatiana; Dhami, Sukhraj Pal; Nicholson, Pamela; Krebs, Philippe; Ó Broin, Pilib; Szegezdi, Eva (2023). Cell-cell interactome of the hematopoietic niche and its changes in acute myeloid leukemia. iScience, 26(6), p. 106943. Elsevier 10.1016/j.isci.2023.106943

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Sage, Sophie E.; Nicholson, Pamela; Peters, Laureen M.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2022). Single-cell gene expression analysis of cryopreserved equine bronchoalveolar cells (In Press). Frontiers in immunology, 13 Frontiers Research Foundation 10.3389/fimmu.2022.929922

Sage, Sophie Elena; Nicholson, Pamela; Leeb, Tosso; Gerber, Vinzenz; Jagannathan, Vidhya (2022). Long-Read Transcriptome of Equine Bronchoalveolar Cells. Genes, 13(10), p. 1722. MDPI, Molecular Diversity Preservation International 10.3390/genes13101722

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Draft genome of Trypanosoma b. brucei EATRO1125 (AnTaR1 serodeme) strain [Dataset]. In: EATRO1125 (AnTaR1 serodeme) pseudo chromosomes.

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Trypanosoma brucei EATRO1125 draft genome assembly (Contigs) [Dataset]. In: Trypanosoma brucei (EATRO1125) genome contigs.

Oberhänsli, Simone

Cvitas, Iva; Oberhaensli, Simone; Leeb, Tosso; Marti, Eliane (2022). Equine keratinocytes in the pathogenesis of insect bite hypersensitivity: Just another brick in the wall? PLoS ONE, 17(8), e0266263. Public Library of Science 10.1371/journal.pone.0266263

Overesch, Gudrun

Aebi, Cindy Bianca; Fernandez, Javier Eduardo; Kittl, Sonja Cornelia; Tresch, Milena Laura; Perreten, Vincent; Overesch, Gudrun (2023). Characterization of third-generation cephalosporin-resistant Escherichia coli from slaughter calves and fattening pigs: A pilot study for monitoring antimicrobial resistance by whole genome sequencing in Switzerland. Schweizer Archiv für Tierheilkunde, 165(6), pp. 372-384. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00396

Keller, Jennifer Eleonora; Schwendener, Sybille; Neuenschwander, Jil; Overesch, Gudrun; Perreten, Vincent (2022). Prevalence and characterization of -methicillin-resistant Macrococcus spp. in food producing animals and meat in Switzerland in 2019. Schweizer Archiv für Tierheilkunde, 164(2), pp. 153-164. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00343

Keller, Jennifer Eleonora; Schwendener, Sybille; Overesch, Gudrun; Perreten, Vincent (2022). Macrococcus armenti sp. nov., a novel bacterium isolated from the skin and nasal cavities of healthy pigs and calves. International journal of systematic and evolutionary microbiology, 72(2) Society for General Microbiology SGM 10.1099/ijsem.0.005245

Peichel, Catherine

Jeffries, Daniel L; Mee, Jonathan A; Peichel, Catherine L (2022). Identification of a candidate sex determination gene in Culaea inconstans suggests convergent recruitment of an Amh duplicate in two lineages of stickleback. Journal of evolutionary biology, 35(12), pp. 1683-1695. Wiley 10.1111/jeb.14034

Dagilis, Andrius J; Sardell, Jason M; Josephson, Matthew P; Su, Yiheng; Kirkpatrick, Mark; Peichel, Catherine L (2022). Searching for signatures of sexually antagonistic selection on stickleback sex chromosomes. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 377(1856), p. 20210205. Royal Society of London 10.1098/rstb.2021.0205

Sardell, Jason M; Josephson, Matthew P; Dalziel, Anne C; Peichel, Catherine L; Kirkpatrick, Mark (2021). Heterogeneous histories of recombination suppression on stickleback sex chromosomes. Molecular Biology and Evolution, 38(10), pp. 4403-4418. Oxford University Press 10.1093/molbev/msab179

Liu, Zuyao; Roesti, Marius; Marques, David; Hiltbrunner, Melanie; Saladin, Verena; Peichel, Catherine L (2021). Chromosomal fusions facilitate adaptation to divergent environments in threespine stickleback (Submitted). Molecular Biology and Evolution Oxford University Press 10.1093/molbev/msab358

Peichel, Catherine L.; McCann, Shaugnessy R; Ross, Joseph A; Naftaly, Alice FS; Urton, James R; Cech, Jennifer N; Grimwood, Jane; Schmutz, Jeremy; Myers, Richard M; Kingsley, David M; White, Michael A (2020). Assembly of the threespine stickleback Y chromosome reveals convergent signatures of sex chromosome evolution. Genome biology, 21(1), p. 177. BioMed Central Ltd. 10.1186/s13059-020-02097-x

Sardell, Jason M; Cheng, Changde; Dagilis, Andrius J; Ishikawa, Asano; Kitano, Jun; Peichel, Catherine L; Kirkpatrick, Mark (2018). Sex Differences in Recombination in Sticklebacks. G3 Genes Genomes Genetics, 8(6), pp. 1971-1983. Genetics Society of America 10.1534/g3.118.200166

Peischl, Stephan

Wang, Xuejing; Peischl, Stephan; Heckel, Gerald (2023). Demographic history and genomic consequences of 10,000 generations of isolation in a wild mammal. Current biology, 33(10), 2051-2062.e4. Cell Press 10.1016/j.cub.2023.04.042

Perret-Gentil-dit-Maillard, Saskia

Safari, Fatemeh; Yeoh, Wen Jie; Perret-Gentil, Saskia; Klenke, Frank; Dolder, Silvia; Hofstetter, Wilhelm; Krebs, Philippe (2024). SHIP1 deficiency causes inflammation-dependent retardation in skeletal growth. Life science alliance, 7(5) EMBO Press 10.26508/lsa.202302297

Perreten, Vincent

Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337

Marchionatti, Emma; Perreten, Vincent (2023). Novel macrolide-lincosamide-streptogramin B resistance gene erm(56) in Trueperella pyogenes. mSphere, 8(4), e0023923. American Society for Microbiology 10.1128/msphere.00239-23

Aebi, Cindy Bianca; Fernandez, Javier Eduardo; Kittl, Sonja Cornelia; Tresch, Milena Laura; Perreten, Vincent; Overesch, Gudrun (2023). Characterization of third-generation cephalosporin-resistant Escherichia coli from slaughter calves and fattening pigs: A pilot study for monitoring antimicrobial resistance by whole genome sequencing in Switzerland. Schweizer Archiv für Tierheilkunde, 165(6), pp. 372-384. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00396

Keller, Jennifer Eleonora; Schwendener, Sybille; Nováková, Dana; Pantůček, Roman; Perreten, Vincent (2023). Novel Antimicrobial Genetic Elements in Methicillin-Resistant Macrococcus armenti. Microbial drug resistance, 29(2), pp. 65-68. Mary Ann Liebert 10.1089/mdr.2022.0162

Albert, Ervin; Sipos, Rita; Perreten, Vincent; Tóth, Ákos; Ungvári, Erika; Papp, Márton; Dán, Ádám; Biksi, Imre; Khurshid, Mohsin (2023). High Prevalence of Livestock-Associated Methicillin-Resistant Staphylococcus aureus in Hungarian Pig Farms and Genomic Evidence for the Spillover of the Pathogen to Humans. Transboundary and emerging diseases, 2023, pp. 1-13. Wiley 10.1155/2023/5540019

Marchionatti, Emma; Perreten, Vincent (2022). Whole-Genome Sequences of Antibiotic-Resistant Trueperella pyogenes Isolates from Surgical Site Infections in Dairy Cows in Switzerland. Microbiology resource announcements, 11(12), e0086522. American Society for Microbiology 10.1128/mra.00865-22

Findlay, Jacqueline; Perreten, Vincent; Poirel, Laurent; Nordmann, Patrice (2022). Molecular analysis of OXA-48-producing Escherichia coli in Switzerland from 2019 to 2020. European journal of clinical microbiology & infectious diseases, 41(11), pp. 1355-1360. Springer 10.1007/s10096-022-04493-6

Fernandez, Javier E; Seth-Smith, Helena M B; Nordmann, Patrice; Egli, Adrian; Endimiani, Andrea; Perreten, Vincent (2022). Intra- and Interspecies Spread of a Novel Conjugative Multidrug Resistance IncC Plasmid Coharboring blaOXA-181 and armA in a Cystic Fibrosis Patient. Microbiology spectrum, 10(5), e0312122. American Society for Microbiology 10.1128/spectrum.03121-22

Becker, Jens; Fernandez, Javier E; Rossano, Alexandra; Meylan, Mireille; Perreten, Vincent (2022). Clonal dissemination of MDR Pasteurella multocida ST79 in a small Swiss veal calf farm with high use of antibiotics. The journal of antimicrobial chemotherapy, 77(10), pp. 2886-2888. Oxford University Press 10.1093/jac/dkac270

Hurni, J I; Kaiser-Thom, S; Gerber, V; Keller, J E; Collaud, A; Fernandez, J; Schwendener, S; Perreten, V (2022). Prevalence and whole genome-based phylogenetic, virulence and antibiotic ­resistance characteristics of nasal ­Staphylococcus aureus in healthy Swiss horses. Schweizer Archiv für Tierheilkunde, 164(7), pp. 499-512. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00360

Kaiser-Thom, Sarah; Gerber, Vinzenz; Collaud, Alexandra; Hurni, Joel; Perreten, Vincent (2022). Prevalence and WGS-based characteristics of Staphylococcus aureus in the nasal mucosa and pastern of horses with equine pastern dermatitis. BMC veterinary research, 18(1), p. 79. BioMed Central 10.1186/s12917-021-03053-y

Keller, Jennifer Eleonora; Schwendener, Sybille; Neuenschwander, Jil; Overesch, Gudrun; Perreten, Vincent (2022). Prevalence and characterization of -methicillin-resistant Macrococcus spp. in food producing animals and meat in Switzerland in 2019. Schweizer Archiv für Tierheilkunde, 164(2), pp. 153-164. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00343

Keller, Jennifer Eleonora; Schwendener, Sybille; Overesch, Gudrun; Perreten, Vincent (2022). Macrococcus armenti sp. nov., a novel bacterium isolated from the skin and nasal cavities of healthy pigs and calves. International journal of systematic and evolutionary microbiology, 72(2) Society for General Microbiology SGM 10.1099/ijsem.0.005245

Brilhante, Michael; Gobeli Brawand, Stefanie; Endimiani, Andrea; Rohrbach, Helene; Kittl, Sonja; Willi, Barbara; Schuller, Simone; Perreten, Vincent (2021). Two high-risk clones of carbapenemase-producing Klebsiella pneumoniae that cause infections in pets and are present in the environment of a veterinary referral hospital. Journal of antimicrobial chemotherapy, 76(5), pp. 1140-1149. Oxford University Press 10.1093/jac/dkab028

Fernandez, Javier Eduardo; Perreten, Vincent; Schwendener, Sybille (2021). The novel macrolide resistance genes mef(F) and msr(G) are located on a plasmid in Macrococcus canis and a transposon in Macrococcus caseolyticus. The journal of antimicrobial chemotherapy, 76(1), pp. 48-54. Oxford University Press 10.1093/jac/dkaa405

Brilhante, Michael; Menezes, Juliana; Belas, Adriana; Feudi, Claudia; Schwarz, Stefan; Pomba, Constança; Perreten, Vincent (2020). OXA-181-Producing Extraintestinal Pathogenic Escherichia coli Sequence Type 410 Isolated from a Dog in Portugal. Antimicrobial agents and chemotherapy, 64(4) American Society for Microbiology 10.1128/AAC.02298-19

Chanchaithong, Pattrarat; Perreten, Vincent; Schwendener, Sybille (2019). Macrococcus canis contains recombinogenic methicillin resistance elements and the mecB plasmid found in Staphylococcus aureus. Journal of antimicrobial chemotherapy, 74(9), pp. 2531-2536. Oxford University Press 10.1093/jac/dkz260

Peters, Laureen Michèle

Lourdes Frehner, Bianca; Christen, Matthias; Reichler, Iris M; Jagannathan, Vidhya; Novacco, Marilisa; Riond, Barbara; Peters, Laureen M; Suárez Sánchez-Andrade, José; Pieńkowska-Schelling, Aldona; Schelling, Claude; Kipar, Anja; Leeb, Tosso; Balogh, Orsolya (2023). Autosomal recessive hyposegmentation of granulocytes in Australian Shepherd Dogs indicates a role for LMBR1L in myeloid leukocytes. PLoS genetics, 19(6), e1010805. Public Library of Science 10.1371/journal.pgen.1010805

Sage, Sophie E.; Nicholson, Pamela; Peters, Laureen M.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2022). Single-cell gene expression analysis of cryopreserved equine bronchoalveolar cells (In Press). Frontiers in immunology, 13 Frontiers Research Foundation 10.3389/fimmu.2022.929922

Pieńkowska-Schelling, Aldona

Lourdes Frehner, Bianca; Christen, Matthias; Reichler, Iris M; Jagannathan, Vidhya; Novacco, Marilisa; Riond, Barbara; Peters, Laureen M; Suárez Sánchez-Andrade, José; Pieńkowska-Schelling, Aldona; Schelling, Claude; Kipar, Anja; Leeb, Tosso; Balogh, Orsolya (2023). Autosomal recessive hyposegmentation of granulocytes in Australian Shepherd Dogs indicates a role for LMBR1L in myeloid leukocytes. PLoS genetics, 19(6), e1010805. Public Library of Science 10.1371/journal.pgen.1010805

Quinta Brilhante, Michael

Brilhante, Michael; Gobeli Brawand, Stefanie; Endimiani, Andrea; Rohrbach, Helene; Kittl, Sonja; Willi, Barbara; Schuller, Simone; Perreten, Vincent (2021). Two high-risk clones of carbapenemase-producing Klebsiella pneumoniae that cause infections in pets and are present in the environment of a veterinary referral hospital. Journal of antimicrobial chemotherapy, 76(5), pp. 1140-1149. Oxford University Press 10.1093/jac/dkab028

Brilhante, Michael; Menezes, Juliana; Belas, Adriana; Feudi, Claudia; Schwarz, Stefan; Pomba, Constança; Perreten, Vincent (2020). OXA-181-Producing Extraintestinal Pathogenic Escherichia coli Sequence Type 410 Isolated from a Dog in Portugal. Antimicrobial agents and chemotherapy, 64(4) American Society for Microbiology 10.1128/AAC.02298-19

Rehmann, Ruth

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Draft genome of Trypanosoma b. brucei EATRO1125 (AnTaR1 serodeme) strain [Dataset]. In: EATRO1125 (AnTaR1 serodeme) pseudo chromosomes.

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Trypanosoma brucei EATRO1125 draft genome assembly (Contigs) [Dataset]. In: Trypanosoma brucei (EATRO1125) genome contigs.

Remy-Wohlfender, Franziska

Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501

Retel, Cas

Retel, Cas; Kowallik, Vienna; Becks, Lutz; Feulner, Philine G. D. (2022). Strong selection and high mutation supply characterize experimental Chlorovirus evolution. Virus evolution, 8(1), pp. 1-14. Oxford University Press 10.1093/ve/veac003

Roditi, Isabel

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Draft genome of Trypanosoma b. brucei EATRO1125 (AnTaR1 serodeme) strain [Dataset]. In: EATRO1125 (AnTaR1 serodeme) pseudo chromosomes.

Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Trypanosoma brucei EATRO1125 draft genome assembly (Contigs) [Dataset]. In: Trypanosoma brucei (EATRO1125) genome contigs.

Rohrbach, Helene

Brilhante, Michael; Gobeli Brawand, Stefanie; Endimiani, Andrea; Rohrbach, Helene; Kittl, Sonja; Willi, Barbara; Schuller, Simone; Perreten, Vincent (2021). Two high-risk clones of carbapenemase-producing Klebsiella pneumoniae that cause infections in pets and are present in the environment of a veterinary referral hospital. Journal of antimicrobial chemotherapy, 76(5), pp. 1140-1149. Oxford University Press 10.1093/jac/dkab028

Roosje Hasler, Pieternella

Bannasch, Danika L.; Kaelin, Christopher B; Letko, Anna; Loechel, Robert; Hug, Petra; Jagannathan, Vidhya; Henkel, Jan; Roosje, Petra; Hytönen, Marjo K; Lohi, Hannes; Arumilli, Meharji; Minor, Katie M; Mickelson, James R; Drögemüller, Cord; Barsh, Gregory S; Leeb, Tosso (2021). Dog colour patterns explained by modular promoters of ancient canid origin. Nature ecology & evolution, 5(10), pp. 1415-1423. Nature Publishing Group 10.1038/s41559-021-01524-x

Balmer, Pierre; Hariton, William V. J.; Sayar, Beyza; Jagannathan, Vidhya; Galichet, Arnaud; Leeb, Tosso; Roosje, Petra; Müller, Eliane J. (2021). SUV39H2 epigenetic silencing controls fate conversion of epidermal stem and progenitor cells. Journal of cell biology, 220(4) Rockefeller Institute Press 10.1083/jcb.201908178

Rossano, Alexandra

Becker, Jens; Fernandez, Javier E; Rossano, Alexandra; Meylan, Mireille; Perreten, Vincent (2022). Clonal dissemination of MDR Pasteurella multocida ST79 in a small Swiss veal calf farm with high use of antibiotics. The journal of antimicrobial chemotherapy, 77(10), pp. 2886-2888. Oxford University Press 10.1093/jac/dkac270

Rudd Garcés, Gabriela

Rudd Garces, Gabriela; Christen, Matthias; Loechel, Robert; Jagannathan, Vidhya; Leeb, Tosso (2022). FYCO1 Frameshift Deletion in Wirehaired Pointing Griffon Dogs with Juvenile Cataract. Genes, 13(2), p. 334. MDPI, Molecular Diversity Preservation International 10.3390/genes13020334

Ruggli, Nicolas

Radulovic, Emilia; Mehinagic, Kemal; Wüthrich, Tsering; Hilty, Markus; Posthaus, Horst; Summerfield, Artur; Ruggli, Nicolas; Benarafa, Charaf (2022). The baseline immunological and hygienic status of pigs impact disease severity of African swine fever. PLoS pathogens, 18(8), e1010522. Public Library of Science 10.1371/journal.ppat.1010522

Rösti, Marius Samuel

Liu, Zuyao; Roesti, Marius; Marques, David; Hiltbrunner, Melanie; Saladin, Verena; Peichel, Catherine L (2021). Chromosomal fusions facilitate adaptation to divergent environments in threespine stickleback (Submitted). Molecular Biology and Evolution Oxford University Press 10.1093/molbev/msab358

Safari, Fatemeh

Safari, Fatemeh; Yeoh, Wen Jie; Perret-Gentil, Saskia; Klenke, Frank; Dolder, Silvia; Hofstetter, Wilhelm; Krebs, Philippe (2024). SHIP1 deficiency causes inflammation-dependent retardation in skeletal growth. Life science alliance, 7(5) EMBO Press 10.26508/lsa.202302297

Sage, Sophie Elena

Sage, Sophie E.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2024). Single-cell profiling of bronchoalveolar cells reveals a Th17 signature in neutrophilic severe equine asthma. Immunology, 171(4), pp. 549-565. Wiley-Blackwell 10.1111/imm.13745

Sage, Sophie E.; Nicholson, Pamela; Peters, Laureen M.; Leeb, Tosso; Jagannathan, Vidhya; Gerber, Vinzenz (2022). Single-cell gene expression analysis of cryopreserved equine bronchoalveolar cells (In Press). Frontiers in immunology, 13 Frontiers Research Foundation 10.3389/fimmu.2022.929922

Sage, Sophie Elena; Nicholson, Pamela; Leeb, Tosso; Gerber, Vinzenz; Jagannathan, Vidhya (2022). Long-Read Transcriptome of Equine Bronchoalveolar Cells. Genes, 13(10), p. 1722. MDPI, Molecular Diversity Preservation International 10.3390/genes13101722

Saladin, Verena

Liu, Zuyao; Roesti, Marius; Marques, David; Hiltbrunner, Melanie; Saladin, Verena; Peichel, Catherine L (2021). Chromosomal fusions facilitate adaptation to divergent environments in threespine stickleback (Submitted). Molecular Biology and Evolution Oxford University Press 10.1093/molbev/msab358

Sayar, Beyza

Balmer, Pierre; Hariton, William V. J.; Sayar, Beyza; Jagannathan, Vidhya; Galichet, Arnaud; Leeb, Tosso; Roosje, Petra; Müller, Eliane J. (2021). SUV39H2 epigenetic silencing controls fate conversion of epidermal stem and progenitor cells. Journal of cell biology, 220(4) Rockefeller Institute Press 10.1083/jcb.201908178

Schuller, Simone

Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337

Brilhante, Michael; Gobeli Brawand, Stefanie; Endimiani, Andrea; Rohrbach, Helene; Kittl, Sonja; Willi, Barbara; Schuller, Simone; Perreten, Vincent (2021). Two high-risk clones of carbapenemase-producing Klebsiella pneumoniae that cause infections in pets and are present in the environment of a veterinary referral hospital. Journal of antimicrobial chemotherapy, 76(5), pp. 1140-1149. Oxford University Press 10.1093/jac/dkab028

Schweizer, Daniela Esther

Ludwig-Peisker, Odette; Ansel, Emily; Schweizer, Daniela; Jagannathan, Vidhya; Loechel, Robert; Leeb, Tosso (2022). PCYT1A Missense Variant in Vizslas with Disproportionate Dwarfism. Genes, 13(12), p. 2354. MDPI, Molecular Diversity Preservation International 10.3390/genes13122354

Schwendener, Sybille

Keller, Jennifer Eleonora; Schwendener, Sybille; Nováková, Dana; Pantůček, Roman; Perreten, Vincent (2023). Novel Antimicrobial Genetic Elements in Methicillin-Resistant Macrococcus armenti. Microbial drug resistance, 29(2), pp. 65-68. Mary Ann Liebert 10.1089/mdr.2022.0162

Hurni, J I; Kaiser-Thom, S; Gerber, V; Keller, J E; Collaud, A; Fernandez, J; Schwendener, S; Perreten, V (2022). Prevalence and whole genome-based phylogenetic, virulence and antibiotic ­resistance characteristics of nasal ­Staphylococcus aureus in healthy Swiss horses. Schweizer Archiv für Tierheilkunde, 164(7), pp. 499-512. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00360

Keller, Jennifer Eleonora; Schwendener, Sybille; Neuenschwander, Jil; Overesch, Gudrun; Perreten, Vincent (2022). Prevalence and characterization of -methicillin-resistant Macrococcus spp. in food producing animals and meat in Switzerland in 2019. Schweizer Archiv für Tierheilkunde, 164(2), pp. 153-164. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00343

Keller, Jennifer Eleonora; Schwendener, Sybille; Overesch, Gudrun; Perreten, Vincent (2022). Macrococcus armenti sp. nov., a novel bacterium isolated from the skin and nasal cavities of healthy pigs and calves. International journal of systematic and evolutionary microbiology, 72(2) Society for General Microbiology SGM 10.1099/ijsem.0.005245

Fernandez, Javier Eduardo; Perreten, Vincent; Schwendener, Sybille (2021). The novel macrolide resistance genes mef(F) and msr(G) are located on a plasmid in Macrococcus canis and a transposon in Macrococcus caseolyticus. The journal of antimicrobial chemotherapy, 76(1), pp. 48-54. Oxford University Press 10.1093/jac/dkaa405

Chanchaithong, Pattrarat; Perreten, Vincent; Schwendener, Sybille (2019). Macrococcus canis contains recombinogenic methicillin resistance elements and the mecB plasmid found in Staphylococcus aureus. Journal of antimicrobial chemotherapy, 74(9), pp. 2531-2536. Oxford University Press 10.1093/jac/dkz260

Seehausen, Ole

Frei, David; Reichlin, Pascal; Seehausen, Ole; Feulner, Philine G. D. (2023). Introgression from extinct species facilitates adaptation to its vacated niche. Molecular Ecology, 32(4), pp. 841-853. Wiley-Blackwell 10.1111/mec.16791

Frei, David; De-Kayne, Rishi; Selz, Oliver M; Seehausen, Ole; Feulner, Philine G D (2022). Genomic variation from an extinct species is retained in the extant radiation following speciation reversal. Nature ecology & evolution, 6(4), pp. 461-468. Springer Nature 10.1038/s41559-022-01665-7

De-Kayne, Rishi; Selz, Oliver M; Marques, David A; Frei, David; Seehausen, Ole; Feulner, Philine G D (2022). Genomic architecture of adaptive radiation and hybridization in Alpine whitefish. Nature Communications, 13(1), p. 4479. Springer Nature 10.1038/s41467-022-32181-8

Selz, Oliver Martin

Frei, David; De-Kayne, Rishi; Selz, Oliver M; Seehausen, Ole; Feulner, Philine G D (2022). Genomic variation from an extinct species is retained in the extant radiation following speciation reversal. Nature ecology & evolution, 6(4), pp. 461-468. Springer Nature 10.1038/s41559-022-01665-7

Seuberlich, Torsten

Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501

Soto Martin, Sara

Kiener, Sarah; Åhman, Susanne; Cikota, Robert; Jagannathan, Vidhya; Blatter, Sohvi; Cvitas, Iva; Soto, Sara; Leeb, Tosso (2024). Heterozygous ASPRV1 frameshift variant in a Pembroke Welsh Corgi with ichthyosis. Animal genetics, 55(3), pp. 490-492. Wiley 10.1111/age.13423

Kiener, Sarah; Åhman, Susanne; Jagannathan, Vidhya; Soto, Sara; Leeb, Tosso (2023). Heterozygous KRT10 missense variant in a Chihuahua with severe epidermolytic ichthyosis. Animal genetics, 54(5), pp. 652-654. Wiley 10.1111/age.13341

Kiener, Sarah; Apostolopoulos, Neoklis; Schissler, Jennifer; Hass, Pascal-Kolja; Leuthard, Fabienne; Jagannathan, Vidhya; Schuppisser, Carole; Soto, Sara; Welle, Monika; Mayer, Ursula; Leeb, Tosso; Fischer, Nina M; Kaessmeyer, Sabine (2022). Independent COL5A1 Variant in Cats with Ehlers-Danlos Syndrome. Genes, 13(5), p. 797. MDPI, Molecular Diversity Preservation International 10.3390/genes13050797

Summerfield, Artur

Radulovic, Emilia; Mehinagic, Kemal; Wüthrich, Tsering; Hilty, Markus; Posthaus, Horst; Summerfield, Artur; Ruggli, Nicolas; Benarafa, Charaf (2022). The baseline immunological and hygienic status of pigs impact disease severity of African swine fever. PLoS pathogens, 18(8), e1010522. Public Library of Science 10.1371/journal.ppat.1010522

Tresch, Milena Laura

Aebi, Cindy Bianca; Fernandez, Javier Eduardo; Kittl, Sonja Cornelia; Tresch, Milena Laura; Perreten, Vincent; Overesch, Gudrun (2023). Characterization of third-generation cephalosporin-resistant Escherichia coli from slaughter calves and fattening pigs: A pilot study for monitoring antimicrobial resistance by whole genome sequencing in Switzerland. Schweizer Archiv für Tierheilkunde, 165(6), pp. 372-384. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00396

Unger, Lucia

Hierweger, Melanie M.; Remy-Wohlfender, Franziska; Franzen, Jan; Koch, Michel C.; Blau, Désirée; Schoster, Angelika; Nicholson, Pamela; Gerber, Vinzenz; Gurtner, Corinne; Fouché, Nathalie; Unger, Lucia; Seuberlich, Torsten (2022). Outbreak of equine coronavirus disease in adult horses, Switzerland 2021. Transboundary and emerging diseases, 69(4), pp. 1691-1694. Wiley 10.1111/tbed.14501

Wang, Xuejing

Wang, Xuejing; Peischl, Stephan; Heckel, Gerald (2023). Demographic history and genomic consequences of 10,000 generations of isolation in a wild mammal. Current biology, 33(10), 2051-2062.e4. Cell Press 10.1016/j.cub.2023.04.042

Welle, Monika Maria

Kiener, Sarah; McMahill, Barbara G; Affolter, Verena K; Welle, Monika; Yager, Julie A; Jagannathan, Vidhya; Leeb, Tosso (2023). SOAT1 missense variant in two cats with sebaceous gland dysplasia. Molecular genetics and genomics : MGG, 298(4), pp. 837-843. Springer 10.1007/s00438-023-02020-6

Kiener, Sarah; Apostolopoulos, Neoklis; Schissler, Jennifer; Hass, Pascal-Kolja; Leuthard, Fabienne; Jagannathan, Vidhya; Schuppisser, Carole; Soto, Sara; Welle, Monika; Mayer, Ursula; Leeb, Tosso; Fischer, Nina M; Kaessmeyer, Sabine (2022). Independent COL5A1 Variant in Cats with Ehlers-Danlos Syndrome. Genes, 13(5), p. 797. MDPI, Molecular Diversity Preservation International 10.3390/genes13050797

Kiener, Sarah; Rostaher, Ana; Rüfenacht, Silvia; Jagannathan, Vidhya; Sundberg, John P.; Welle, Monika; Leeb, Tosso (2022). Independent DSG4 frameshift variants in cats with hair shaft dystrophy. Molecular genetics and genomics : MGG, 297(1), pp. 147-154. Springer 10.1007/s00438-021-01842-6

Gerber, Nadja; Brunner, Magdalena A. T.; Jagannathan, Vidya; Leeb, Tosso; Gerhards, Nora M.; Welle, Monika M.; Dettwiler, Martina (2021). Transcriptional Differences between Canine Cutaneous Epitheliotropic Lymphoma and Immune-Mediated Dermatoses. Genes, 12(2) MDPI, Molecular Diversity Preservation International 10.3390/genes12020160

Kiener, Sarah; Cikota, Robert; Welle, Monika; Jagannathan, Vidhya; Åhman, Susanne; Leeb, Tosso (2021). A Missense Variant in SLC39A4 in a Litter of Turkish Van Cats with Acrodermatitis Enteropathica. Genes, 12(9), p. 1309. MDPI, Molecular Diversity Preservation International 10.3390/genes12091309

Wüthrich, Tsering Monika

Radulovic, Emilia; Mehinagic, Kemal; Wüthrich, Tsering; Hilty, Markus; Posthaus, Horst; Summerfield, Artur; Ruggli, Nicolas; Benarafa, Charaf (2022). The baseline immunological and hygienic status of pigs impact disease severity of African swine fever. PLoS pathogens, 18(8), e1010522. Public Library of Science 10.1371/journal.ppat.1010522

Yeoh, Wen Jie

Safari, Fatemeh; Yeoh, Wen Jie; Perret-Gentil, Saskia; Klenke, Frank; Dolder, Silvia; Hofstetter, Wilhelm; Krebs, Philippe (2024). SHIP1 deficiency causes inflammation-dependent retardation in skeletal growth. Life science alliance, 7(5) EMBO Press 10.26508/lsa.202302297

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