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Stillinovic, Martina; Sarangdhar, Mayuresh Anant; Andina, Nicola; Tardivel, Aubry; Greub, Frédéric; Bombaci, Giuseppe; Ansermet, Camille; Zatti, Marco; Saha, Dipanjali; Xiong, Jieyu; Sagae, Takeru; Yokogawa, Mariko; Osawa, Masanori; Heller, Manfred; Keogh, Adrian; Keller, Irene; Angelillo-Scherrer, Anne; Allam, Ramanjaneyulu (2024). Ribonuclease inhibitor and angiogenin system regulates cell type-specific global translation. Science Advances, 10(22) American Association for the Advancement of Science 10.1126/sciadv.adl0320
Schlegel, Irina; De Goüyon Matignon de Pontourade, Claire M F; Lincke, Joel-Benjamin; Keller, Irene; Zinkernagel, Martin S; Zysset-Burri, Denise C (2023). The Human Ocular Surface Microbiome and Its Associations with the Tear Proteome in Dry Eye Disease. International journal of molecular sciences, 24(18) MDPI 10.3390/ijms241814091
Bustamante Eduardo, Mariana; Keller, Irene; Schuster, Nathalie; Aebi, Stefan; Jaggi, Rolf (2023). Molecular characterization of breast cancer cell pools with normal or reduced ability to respond to progesterone: a study based on RNA-seq. Journal, genetic engineering & biotechnology, 21(1), p. 81. Springer 10.1186/s43141-023-00541-6
Bertschi, Nicole L; Steck, Oliver; Luther, Fabian; Bazzini, Cecilia; von Meyenn, Leonhard; Schärli, Stefanie; Vallone, Angela; Felser, Andrea; Keller, Irene; Friedli, Olivier; Freigang, Stefan; Begré, Nadja; Radonjic-Hoesli, Susanne; Lamos, Cristina; Gabutti, Max Philip; Benzaquen, Michael; Laimer, Markus; Simon, Dagmar; Nuoffer, Jean-Marc and Schlapbach, Christoph (2023). PPAR-γ regulates the effector function of human T helper 9 cells by promoting glycolysis. Nature Communications, 14(1), p. 2471. Springer Nature 10.1038/s41467-023-38233-x
Spinelli, Marialuigia; Zdanowicz, Jarmila A; Keller, Irene; Nicholson, Pamela; Raio, Luigi; Amylidi-Mohr, Sofia; Mosimann, Beatrice; Surbek, Daniel; Mueller, Martin (2022). Hypertensive disorders of pregnancy share common cfDNA methylation profiles. Scientific Reports, 12(1), p. 19837. Nature Publishing Group 10.1038/s41598-022-24348-6
Bertschi, Nicole L; Steck, Oliver; Luther, Fabian; Bazzini, Cecilia; von Meyenn, Leonhard; Felser, Andrea; Keller, Irene; Friedli, Olivier; Freigang, Stefan; Begré, Nadja; Lamos, Cristina; Gabutti, Max Philip; Benzaquen, Michael; Laimer, Markus; Simon, Dagmar; Nuoffer, Jean-Marc; Schlapbach, Christoph (16 August 2022). PPAR-γ regulates the effector function of human TH9 cells by promoting glycolysis (bioRxiv). Cold Spring Harbor Laboratory 10.1101/2022.08.16.503972
Guse, Kirsten; Hagemann, Nina; Thiele, Lisa; Remlinger, Jana; Salmen, Anke; Hoepner, Robert; Keller, Irene; Meyer, Patricia; Grandgirard, Denis; Leib, Stephen; Vassella, Erik; Locatelli, Giuseppe; Hermann, Dirk M; Chan, Andrew Hao-Kuang (2022). CNS Antigen-Specific Neuroinflammation Attenuates Ischemic Stroke With Involvement of Polarized Myeloid Cells. Neurology: neuroimmunology & neuroinflammation, 9(4) Wolters Kluwer Health 10.1212/NXI.0000000000001168
Mohsin, Hassan; Juanola, Oriol; Keller, Irene; Nanni, Paolo; Wolski, Witold; Martínez-López, Sebastián; Caparrós, Esther; Francés, Rubén; Moghadamrad, Sheida (2022). Paneth Cells Regulate Lymphangiogenesis under Control of Microbial Signals during Experimental Portal Hypertension. Biomedicines, 10(7) MDPI 10.3390/biomedicines10071503
Hobi, Gabriel; Cline, J Mark; Ethun, Kelly F; Simillion, Cedric; Keller, Irene; Stute, Petra (2022). Impact of 6 month conjugated equine estrogen versus estradiol-treatment on biomarkers and enriched gene sets in healthy mammary tissue of non-human primates. PLoS ONE, 17(3), e0264057. Public Library of Science 10.1371/journal.pone.0264057
Hashemi Gheinani, Ali; Akshay, Akshay; Besic, Mustafa; Kuhn, Annette; Keller, Irene; Bruggmann, Rémy; Rehrauer, Hubert; Adam, Rosalyn M; Burkhard, Fiona C.; Monastyrskaya, Katia (2021). Integrated mRNA-miRNA transcriptome analysis of bladder biopsies from patients with bladder pain syndrome identifies signaling alterations contributing to the disease pathogenesis. BMC urology, 21(1), p. 172. BMC 10.1186/s12894-021-00934-0
Spinelli, Marialuigia; Boucard, Céline; Ornaghi, Sara; Schoeberlein, Andreina; Keller, Irene; Coman, Daniel; Hyder, Fahmeed; Zhang, Longbo; Haesler, Valérie; Bordey, Angelique; Barnea, Eytan; Paidas, Michael; Surbek, Daniel; Mueller, Martin (2021). Preimplantation factor modulates oligodendrocytes by H19-induced demethylation of NCOR2. JCI insight, 6(20) JCI Insight 10.1172/jci.insight.132335
Zysset-Burri, Denise C.; Schlegel, Irina; Lincke, Joel-Benjamin; Jaggi, Damian; Keller, Irene; Heller, Manfred; Braga Lagache, Sophie; Wolf, Sebastian; Zinkernagel, Martin S. (2021). Understanding the Interactions Between the Ocular Surface Microbiome and the Tear Proteome. Investigative ophthalmology & visual science, 62(10), p. 8. Association for Research in Vision and Ophthalmology 10.1167/iovs.62.10.8
Yilmaz, Bahtiyar; Mooser, Catherine; Keller, Irene; Li, Hai; Zimmermann, Jakob; Bosshard, Lars; Fuhrer, Tobias; Gomez de Agüero, Mercedes; Fernandez Trigo, Nerea; Tschanz-Lischer, Heidi; Limenitakis, Julien P.; Hardt, Wolf-Dietrich; McCoy, Kathleen; Stecher, Bärbel; Excoffier, Laurent; Sauer, Uwe; Ganal-Vonarburg, Stephanie C.; Macpherson, Andrew J. (2021). Long-term evolution and short-term adaptation of microbiota strains and sub-strains in mice. Cell host & microbe, 29(4), 650-663.e9. Cell Press 10.1016/j.chom.2021.02.001
Juanola, Oriol; Hassan, Mohsin; Kumar, Pavitra; Yilmaz, Bahtiyar; Keller, Irene; Simillion, Cedric; Engelmann, Cornelius; Tacke, Frank; Dufour, Jean-François; De Gottardi, Andrea; Moghadamrad, Sheida (2021). Intestinal microbiota drives cholestasis-induced specific hepatic gene expression patterns. Gut microbes, 13(1), pp. 1-20. Taylor & Francis Group 10.1080/19490976.2021.1911534
Joerger-Messerli, Marianne S.; Thomi, Gierin; Haesler, Valérie; Keller, Irene; Renz, Patricia; Surbek, Daniel V.; Schoeberlein, Andreina (2021). Human Wharton’s jelly mesenchymal stromal cell-derived small extracellular vesicles drive oligodendroglial maturation by restraining MAPK/ERK and Notch signaling pathways. Frontiers in cell and developmental biology, 9, p. 622539. Frontiers 10.3389/fcell.2021.622539
Kiener, Sarah; Ribi, Camillo; Keller, Irene; Chizzolini, Carlo; Trendelenburg, Marten; Huynh-Do, Uyen; von Kempis, Johannes; Leeb, Tosso (2021). Variants Affecting the C-Terminal Tail of UNC93B1 Are Not a Common Risk Factor for Systemic Lupus Erythematosus. Genes, 12(8), p. 1268. MDPI 10.3390/genes12081268
Herzog, Elio L; Wäfler, Melania; Keller, Irene; Wolf, Sebastian; Zinkernagel, Martin S; Zysset-Burri, Denise C (2021). The importance of age in compositional and functional profiling of the human intestinal microbiome. PLoS ONE, 16(10), e0258505. Public Library of Science 10.1371/journal.pone.0258505
Mohsin Hassan, Mohsin Hassan; Moghadamrad, Sheida; Sorribas, Marcel; G. Muntet, Sergi; Kellmann, Philipp; Trentesaux, Coralie; Fraudeau, Marie; Nanni, Paolo; Wolski, Witold; Keller, Irene; Hapfelmeier, Siegfried; Shroyer, Noah F; Wiest, Reiner; Romagnolo, Beatrice; De Gottardi, Andrea (2020). Paneth cells promote angiogenesis and regulate portal hypertension in response to microbial signals. Journal of hepatology, 73(3), pp. 628-639. Elsevier 10.1016/j.jhep.2020.03.019
Simon, Rebecca; Lischer, H. E. L.; Pieńkowska-Schelling, A.; Keller, I.; Häfliger, I. M.; Letko, A.; Schelling, C; Lühken, G; Drögemüller, C. (2020). New genomic features of the polled intersex syndrome variant in goats unraveled by long-read whole-genome sequencing. Animal genetics, 51(3), pp. 439-448. Wiley 10.1111/age.12918
Dąbrowska, Joanna; Keller, Irene; Karamon, Jacek; Kochanowski, Maciej; Gottstein, Bruno; Cencek, Tomasz; Frey, Caroline F.; Müller, Norbert (2020). Whole genome sequencing of a feline strain of Tritrichomonas foetus reveals massive genetic differences to bovine and porcine isolates. International journal for parasitology, 50(3), pp. 227-233. Elsevier 10.1016/j.ijpara.2019.12.007
Zysset-Burri, Denise C.; Keller, Irene; Berger, Lieselotte E.; Largiadèr, Carlo R.; Wittwer, Matthias; Wolf, Sebastian; Zinkernagel, Martin S. (2020). Associations of the intestinal microbiome with the complement system in neovascular age-related macular degeneration. NPJ genomic medicine, 5(34), p. 34. Springer Nature 10.1038/s41525-020-00141-0
Joerger Messerli, Marianne; Brosius Lutz, Amanda; Thomi, Gierin; Haesler, Valérie; Keller, Irene; Schoeberlein, Andreina; Surbek, Daniel (2020). 906: Characterization of microRNA cargo of Wharton’s jelly-derived extracellular vesicles and its future role in neuroregeneration. American journal of obstetrics and gynecology, 222(1), S562. Elsevier 10.1016/j.ajog.2019.11.917
Auray, Gael; Talker, Stephanie; Keller, Irene; Python, Sylvie; Gerber, Markus; Liniger, Matthias; Ganges, Llilianne; Bruggmann, Rémy; Ruggli, Nicolas; Summerfield, Artur (2020). High-Resolution Profiling of Innate Immune Responses by Porcine Dendritic Cell Subsets in vitro and in vivo. Frontiers in immunology, 11, p. 1429. Frontiers Research Foundation 10.3389/fimmu.2020.01429
Zysset-Burri, Denise C.; Keller, Irene; Berger, Lieselotte E.; Neyer, Peter J; Steuer, Christian; Wolf, Sebastian; Zinkernagel, Martin S. (2019). Retinal artery occlusion is associated with compositional and functional shifts in the gut microbiome and altered trimethylamine-N-oxide levels. Scientific reports, 9(1), p. 15303. Springer Nature 10.1038/s41598-019-51698-5
Frazão, Josias B; Colombo, Martino; Simillion, Cedric; Bilican, Adem; Keller, Irene; Wüthrich, Daniel; Zhu, Zhiqing; Okoniewski, Michal J; Bruggmann, Rémy; Condino-Neto, Antonio; Newburger, Peter E (2019). Gene expression in chronic granulomatous disease and interferon-γ receptor-deficient cells treated in vitro with interferon-γ. Journal of cellular biochemistry, 120(3), pp. 4321-4332. Wiley-Blackwell 10.1002/jcb.27718
Burkhard, Regula; Keller, Irene; Arambasic, Miroslav; Juskevicius, Darius; Tzankov, Alexandar; Lundberg, Pontus; Bruggmann, Rémy; Dirnhofer, Stephan; Radpour, Ramin; Novak, Urban (2019). TIRAP p.R81C is a novel lymphoma risk variant which enhances cell proliferation via NF-κB mediated signaling in B-cells. Haematologica - the hematology journal, 104(4), pp. 766-777. Ferrata-Storti Foundation 10.3324/haematol.2018.201590
Matthijs, Anneleen M F; Auray, Gael; Jakob, Virginie; Garcia-Nicolas, Obdulio; Braun, Roman O.; Keller, Irene; Bruggmann, Rémy; Devriendt, Bert; Boyen, Filip; Guzman, Carlos A; Michiels, Annelies; Haesebrouck, Freddy; Collin, Nicolas; Barnier-Quer, Christophe; Maes, Dominiek; Summerfield, Artur (2019). Systems Immunology Characterization of Novel Vaccine Formulations for Mycoplasma hyopneumoniae Bacterins. Frontiers in immunology, 10(1087), p. 1087. Frontiers Research Foundation 10.3389/fimmu.2019.01087
Stilinovic, Martina; Andina, Nicola; Tardivel, Aubry; Keller, Irene; Allam, Ramanjaneyulu (2019). RIBONUCLEASE INHIBITOR (RNH1) REGULATES HEMATOPOIETIC CELL SPECIFIC TRANSLATION. Experimental hematology, 76, S49. Elsevier 10.1016/j.exphem.2019.06.302
Talker, Stephanie; Baumann, Arnaud; Barut, Güliz Tuba; Keller, Irene; Bruggmann, Rémy; Summerfield, Artur (2018). Precise Delineation and Transcriptional Characterization of Bovine Blood Dendritic-Cell and Monocyte Subsets. Frontiers in immunology, 9(2505), p. 2505. Frontiers Research Foundation 10.3389/fimmu.2018.02505
Chevalier, Morgan Yoann Edwin; Vermij, Sarah Helena; Wyler, Kurt; Gillet, Ludovic; Keller, Irene; Abriel, Hugues (2018). Corrigendum: Transcriptomic analyses of murine ventricular cardiomyocytes. Scientific data, 5(180216), p. 180216. Nature Publishing Group 10.1038/sdata.2018.216
Hauser, Michel; Siegrist, Mark; Keller, Irene; Hofstetter, Wilhelm (2018). Healing of fractures in osteoporotic bones in mice treated with bisphosphonates - A transcriptome analysis. Bone, 112, pp. 107-119. Elsevier 10.1016/j.bone.2018.04.017
Hensel, Janine; Wetterwald, Antoinette; Temanni, Ramzi; Keller, Irene; Riether, Carsten; van der Pluijm, Gabri; Cecchini, Marco G; Thalmann, George N. (2018). Osteolytic cancer cells induce vascular/axon guidance processes in the bone/bone marrow stroma. OncoTarget, 9(48), pp. 28877-28896. Impact Journals LLC 10.18632/oncotarget.25608
Halbritter, Aud H.; Fior, Simone; Keller, Irene; Billeter, Regula; Edwards, Peter J.; Holderegger, Rolf; Karrenberg, Sophie; Pluess, Andrea R.; Widmer, Alex; Alexander, Jake M. (2018). Trait differentiation and adaptation of plants along elevation gradients. Journal of evolutionary biology, 31(6), pp. 784-800. Wiley 10.1111/jeb.13262
Lucek, Kay Jurka Olaf; Keller, Irene; Nolte, Arne W.; Seehausen, Ole (2018). Distinct colonization waves underlie the diversification of the freshwater sculpin ( Cottus gobio ) in the Central European Alpine region. Journal of Evolutionary Biology, 31(9), pp. 1254-1267. Wiley 10.1111/jeb.13339
Plüss, Michel; Kopps, Anna M; Keller, Irene; Meienberg, Janine; Caspar, Sylvan M; Dubacher, Nicolo; Bruggmann, Rémy; Vogel, Manfred; Matyas, Gabor (2017). Need for speed in accurate whole-genome data analysis: GENALICE MAP challenges BWA/GATK more than PEMapper/PECaller and Isaac. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 114(40), E8320-E8322. National Academy of Sciences NAS 10.1073/pnas.1713830114
Mele, Valentina; Sokol, Lena; Kölzer, Viktor; Pfaff, Dennis; Muraro, Manuele Giuseppe; Keller, Irene; Zahnd, Stefan Patrick; Centeno Ramos, Irene; Terracciano, Luigi Maria; Dawson, Heather; Zlobec, Inti; Iezzi, Giandomenica; Lugli, Alessandro (2017). The hyaluronan-mediated motility receptor RHAMM promotes growth, invasiveness and dissemination of colorectal cancer. OncoTarget, 8(41), pp. 70617-70629. Impact Journals LLC 10.18632/oncotarget.19904
Zinkernagel, Martin; Zysset-Burri, Denise Corinne; Keller, Irene; Berger, Lieselotte Erika; Leichtle, Alexander Benedikt; Largiadèr, Carlo Rodolfo; Fiedler, Martin; Wolf, Sebastian (2017). Association of the Intestinal Microbiome with the Development of Neovascular Age-Related Macular Degeneration. Scientific Reports, 7(40826), p. 40826. Nature Publishing Group 10.1038/srep40826
Anikster, Yair; Haack, Tobias B.; Vilboux, Thierry; Pode-Shakked, Ben; Thöny, Beat; Shen, Nan; Guarani, Virginia; Meissner, Thomas; Mayatepek, Ertan; Trefz, Friedrich K.; Marek-Yagel, Dina; Martinez, Aurora; Huttlin, Edward L.; Paulo, Joao A.; Berutti, Riccardo; Benoist, Jean-François; Imbard, Apolline; Dorboz, Imen; Heimer, Gali; Landau, Yuval; ... (2017). Biallelic Mutations in DNAJC12 Cause Hyperphenylalaninemia, Dystonia, and Intellectual Disability. American journal of human genetics, 100(2), pp. 257-266. Cell Press 10.1016/j.ajhg.2017.01.002
Awasthi, Nivedita; Drögemüller, Cord; Jagannathan, Vidhya; Keller, Irene; Wüthrich, Daniel; Bruggmann, Rémy; Beck, Julia; Schütz, Ekkehard; Brenig, Bertram; Demmel, Steffi; Moser, Simon; Signer-Hasler, Heidi; Pieńkowska-Schelling, Aldona; Schelling, Claude; Sande Melon, Marcos; Rongen, Ronald; Rieder, Stefan; Kelsh, Robert N.; Mercader Huber, Nadia and Leeb, Tosso (2017). A structural variant in the 5’-flanking region of the TWIST2 gene affects melanocyte development in belted cattle. PLoS ONE, 12(6), e0180170. Public Library of Science 10.1371/journal.pone.0180170
Auray, Gael; Keller, Irene; Python, Sylvie; Gerber, Markus Daniel; Bruggmann, Rémy; Ruggli, Nicolas; Summerfield, Artur (2016). Characterization and Transcriptomic Analysis of Porcine Blood Conventional and Plasmacytoid Dendritic Cells Reveals Striking Species-Specific Differences. Journal of immunology, 197(12), pp. 4791-4806. American Association of Immunologists 10.4049/jimmunol.1600672
Leys, Marie; Keller, Irene; Räsänen, Katja; Gattolliat, Jean-Luc; Robinson, Christopher T. (2016). Distribution and population genetic variation of cryptic species of the Alpine mayfly Baetis alpinus (Ephemeroptera: Baetidae) in the Central Alps. BMC ecology and evolution, 16, p. 77. BioMed Central 10.1186/s12862-016-0643-y
Menzi, Fiona; Keller, Irene; Reber, Irene; Beck, Julia; Brenig, Bertram; Schütz, Ekkehard; Leeb, Tosso; Drögemüller, Cord (2016). Genomic amplification of the caprine EDNRA locus might lead to a dose dependent loss of pigmentation. Scientific Reports, 6, p. 28438. Nature Publishing Group 10.1038/srep28438
Miclaus, Mihai; Balacescu, Ovidiu; Has, Ioan; Balacescu, Loredana; Has, Voichita; Suteu, Dana; Neuenschwander, Samuel; Keller, Irene; Bruggmann, Rémy (2016). Maize Cytolines Unmask Key Nuclear Genes That Are under the Control of Retrograde Signaling Pathways in Plants. Genome biology and evolution, 8(11), pp. 3256-3270. Oxford University Press 10.1093/gbe/evw245
Reber, Irene; Keller, Irene; Becker, Doreen; Flury, C; Welle, Monika Maria; Drögemüller, Cord (2015). Wattles in goats are associated with the FMN1/GREM1 region on chromosome 10. Animal genetics, 46(3), pp. 316-320. Blackwell 10.1111/age.12279
Becker, Doreen; Otto, Mandy; Ammann, P; Keller, Irene; Drögemüller, Cord; Leeb, Tosso (2015). The brown coat colour of Coppernecked goats is associated with a non-synonymous variant at the TYRP1 locus on chromosome 8. Animal genetics, 46(1), pp. 50-54. Blackwell 10.1111/age.12240
Li, Hai; Limenitakis, Julien Periclis Jean; Fuhrer, Tobias; Geuking, Markus; Lawson, Melissa A; Wyss, Madeleine; Brugiroux, Sandrine; Keller, Irene; Macpherson, Jamie A; Rupp, Sandra; Stolp, Bettina; Stein, Jens Volker; Stecher, Bärbel; Sauer, Uwe; McCoy, Kathleen; Macpherson, Andrew (2015). The outer mucus layer hosts a distinct intestinal microbial niche. Nature communications, 6, p. 8292. Nature Publishing Group 10.1038/ncomms9292
Seehausen, Ole; Butlin, Roger K.; Keller, Irene; Wagner, Catherine; Boughman, Janette W.; Hohenlohe, Paul A.; Peichel, Catherine L.; Saetre, Glenn-Peter; Bank, Claudia; Brännström, Åke; Brelsford, Alan; Clarkson, Chris S.; Eroukhmanoff, Fabrice; Feder, Jeffrey L.; Fischer, Martin; Foote, Andrew D.; Franchini, Paolo; Jiggins, Chris D.; Jones, Felicity C.; Lindholm, Anna K.; ... (2014). Genomics and the origin of species. Nature Reviews. Genetics, 15(3), pp. 176-192. Natue Publishing Group 10.1038/nrg3644
Brawand, David; Wagner, Catherine; Li, Yang I.; Malinsky, Milan; Keller, Irene; Fan, Shaohua; Simakov, Oleg; Ng, Alvin Y.; Lim, Zhi Wei; Bezault, Etienne; Turner-Maier, Jason; Johnson, Jeremy; Alcazar, Rosa; Noh, Hyun Ji; Russell, Pamela; Aken, Bronwen; Alföldi, Jessica; Amemiya, Chris; Azzouzi, Naoual; Baroiller, Jean-François; ... (2014). The genomic substrate for adaptive radiation in African cichlid fish. Nature, 513(7518), pp. 375-381. Macmillan Journals Ltd. 10.1038/nature13726
Westram, Anja Marie; Jokela, Jukka; Keller, Irene (2013). Hidden Biodiversity in an Ecologically Important Freshwater Amphipod: Differences in Genetic Structure between Two Cryptic Species. PLoS ONE, 8(8), e69576. Public Library of Science 10.1371/journal.pone.0069576
Liu, Yang; Keller, Irene; Heckel, Gerald (2013). Temporal genetic structure and relatedness in the Tufted Duck Aythya fuligula suggests limited kin association in winter. Ibis, 155(3), pp. 499-507. Wiley-Blackwell 10.1111/ibi.12059
Keller, I.; Alexander, J. M.; Holderegger, R.; Edwards, P. J. (2013). Widespread phenotypic and genetic divergence along altitudinal gradients in animals. Journal of Evolutionary Biology, 26(12), pp. 2527-2543. Wiley 10.1111/jeb.12255
Liu, Y.; Keller, I.; Heckel, G. (2012). Breeding site fidelity and winter admixture in a long-distance migrant, the tufted duck (Aythya fuligula). Heredity, 109(2), pp. 108-116. London: Oliver and Boyd 10.1038/hdy.2012.19
Alp, M.; Keller, I.; Westram, A.M.; Robinson, C.T. (2012). How river structure and biological traits influence gene flow: a population genetic study of two stream invertebrates with differing dispersal abilities. Freshwater biology, 57(5), pp. 969-981. Oxford: Blackwell Scientific Publications 10.1111/j.1365-2427.2012.02758.x
Junker, J.; Peter, A.; Wagner, C.E.; Mwaiko, S.; Germann, B.; Seehausen, O.; Keller, I. (2012). River fragmentation increases localized population genetic structure and enhances asymmetry of dispersal in bullhead (Cottus gobio). Conservation genetics, 13(2), pp. 545-556. Dordrecht: Springer Netherlands 10.1007/s10592-011-0306-x
Keller, Irene; Schuler, Jolanda; Bezault, Etienne; Seehausen, Ole (2012). Parallel divergent adaptation along replicated altitudinal gradients in Alpine trout. BMC evolutionary biology, 12(1), p. 210. London: BioMed Central 10.1186/1471-2148-12-210
Keller, I.; Wagner, C. E.; Greuter, L.; Mwaiko, S.; Selz, Oliver; Sivasundar, A.; Wittwer, S.; Seehausen, O. (2012). Population genomic signatures of divergent adaptation, gene flow and hybrid speciation in the rapid radiation of Lake Victoria cichlid fishes. Molecular Ecology, 22(11), pp. 2848-2863. Oxford: Wiley-Blackwell 10.1111/mec.12083
Wagner, C. E.; Keller, I.; Wittwer, S.; Selz, Oliver; Mwaiko, S.; Greuter, L.; Sivasundar, A.; Seehausen, O. (2012). Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cichlid adaptive radiation. Molecular Ecology, 22(3), pp. 787-798. Oxford: Wiley-Blackwell 10.1111/mec.12023
Westram, Anja Marie; Jokela, Jukka; Baumgartner, Caroline; Keller, Irene; Steinke, Dirk (2011). Spatial Distribution of Cryptic Species Diversity in European Freshwater Amphipods (Gammarus fossarum) as Revealed by Pyrosequencing. PLoS ONE, 6(8), e23879. Public Library of Science 10.1371/journal.pone.0023879
Westram, A.M.; Baumgartner, C.; Keller, Irene; Jokela, J. (2011). Are cryptic host species also cryptic to parasites? Host specificity and geographical distribution of acanthocephalan parasites infecting freshwater Gammarus. Infection, genetics and evolution, 11(5), pp. 1083-1090. Elsevier 10.1016/j.meegid.2011.03.024
Westram, A. M.; Jokela, J.; Keller, Irene (2010). Isolation and characterization of ten polymorphic microsatellite markers for three cryptic Gammarus fossarum (Amphipoda) species. Conservation genetics resources, 2(S1), pp. 401-404. Springer 10.1007/s12686-010-9287-1
Keller, Irene; Korner-Nievergelt, Fränzi; Jenni, Lukas (2009). Within-winter movements: a common phenomenon in the Common Pochard Aythya ferina. Journal of ornithology, 150(2), pp. 483-494. Springer 10.1007/s10336-008-0367-x
