Baes, Christine Francoise

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Butty, Adrien M; Chud, Tatiane C S; Cardoso, Diercles F; Lopes, Lucas S F; Miglior, Filippo; Schenkel, Flavio S; Cánovas, Angela; Häfliger, Irene M.; Drögemüller, Cord; Stothard, Paul; Malchiodi, Francesca; Baes, Christine F. (2021). Genome-wide association study between copy number variants and hoof health traits in Holstein dairy cattle. (In Press). Journal of dairy science American Dairy Science Association 10.3168/jds.2020-19879

Massender, Erin; Brito, Luiz F.; Cánovas, Angela; Baes, Christine F.; Kennedy, Delma; Schenkel, Flavio S. (2021). The value of incorporating carcass trait phenotypes in terminal sire selection indexes to improve carcass weight and quality of heavy lambs. Journal of animal breeding and genetics, 138(1), pp. 91-107. Wiley-Blackwell 10.1111/jbg.12484


Abdalla, E. A.; Id-Lahoucine, S.; Cánovas, A.; Casellas, J.; Schenkel, F. S.; Wood, B. J.; Baes, C. F. (2020). Discovering lethal alleles across the turkey genome using a transmission ratio distortion approach. Animal genetics, 51(6), pp. 876-889. Wiley 10.1111/age.13003

Leishman, Emily M.; Freeman, Nikole E.; Newman, Amy E. M.; van Staaveren, Nienke; Wood, Benjamin J.; Harlander-Matauschek, Alexandra; Baes, Christine F. (2020). Research Note: Quantifying corticosterone in turkey (Meleagris gallopavo) feathers using ELISA. Poultry science, 99(11), pp. 5261-5264. Elsevier 10.1016/j.psj.2020.06.075

Makanjuola, Bayode O.; Maltecca, Christian; Miglior, Filippo; Schenkel, Flavio S.; Baes, Christine F. (2020). Effect of recent and ancient inbreeding on production and fertility traits in Canadian Holsteins. BMC Genomics, 21(1), p. 605. BioMed Central 10.1186/s12864-020-07031-w

Bannasch, Danika L.; Baes, Christine F.; Leeb, Tosso (2020). Genetic Variants Affecting Skeletal Morphology in Domestic Dogs. Trends in genetics, 36(8), pp. 598-609. Elsevier 10.1016/j.tig.2020.05.005

van Staaveren, Nienke; Leishman, Emily M; Adams, Sarah M; Wood, Benjamin J; Harlander-Matauschek, Alexandra; Baes, Christine F. (2020). Housing and Management of Turkey Flocks in Canada. Animals, 10(7) MDPI 10.3390/ani10071159

Makanjuola, Bayode O.; Miglior, Filippo; Abdalla, Emhimad A.; Maltecca, Christian; Schenkel, Flavio S.; Baes, Christine F. (2020). Effect of genomic selection on rate of inbreeding and coancestry and effective population size of Holstein and Jersey cattle populations. Journal of dairy science, 103(6), pp. 5183-5199. American Dairy Science Association 10.3168/jds.2019-18013

Naylor, D.; Sharma, A.; Li, Z.; Monteith, G.; Sullivan, T.; Canovas, A.; Mallard, B. A.; Baes, C.; Karrow, N. A. (2020). Short communication: Characterizing ovine serum stress biomarkers during endotoxemia. Journal of dairy science, 103(6), pp. 5501-5508. American Dairy Science Association 10.3168/jds.2019-17718

Maltecca, C.; Tiezzi, F.; Cole, J. B.; Baes, C. (2020). Symposium review: Exploiting homozygosity in the era of genomics-Selection, inbreeding, and mating programs. Journal of dairy science, 103(6), pp. 5302-5313. American Dairy Science Association 10.3168/jds.2019-17846

Alves, Kristen; Brito, Luiz F.; Baes, Christine F.; Sargolzaei, Mehdi; Robinson, John Andrew B.; Schenkel, Flavio S. (2020). Estimation of additive and non-additive genetic effects for fertility and reproduction traits in North American Holstein cattle using genomic information. Journal of animal breeding and genetics, 137(3), pp. 316-330. Wiley-Blackwell 10.1111/jbg.12466

Baes, Christine; Schenkel, Flavio (2020). The Future of Phenomics. Animal frontiers, 10(2), pp. 4-5. Oxford University Press 10.1093/af/vfaa013

Brito, Luiz; Rojay de Oliveira, Hinaya; Houlahan, Kerry; Fonseca, Pablo; Lam, Stephanie; Butty, Adrien; Seymour, David; Vargas, Giovanna; Chud, Tatiana; Silva, Fabiola; Baes, Christine; Canovas, Angela; Schenkel, Flavio (2020). Genetic mechanisms underlying feed utilization and implementation of genomic selection for improved feed efficiency in dairy cattle. Canadian journal of animal science, 100(4), pp. 587-604. Canadian Science Publishing 10.1139/CJAS-2019-0193

Nayeri, Shadi; Schenkel, Flavio S.; Martin, Pauline; Fleming, Allison; Jamrozik, Janusz; Malchiodi, Francesca; Brito, Luiz F.; Baes, Christine F.; Sargolzaei, Mehdi; Miglior, Filippo (2020). Estimation of genetic parameters for mid-infrared-predicted lactoferrin and milk fat globule size in Holstein cattle. Journal of dairy science, 103(3), pp. 2487-2497. American Dairy Science Association 10.3168/jds.2019-16850

Seymour, D. J.; Cánovas, A.; Chud, T. C. S.; Cant, J. P.; Osborne, V. R.; Baes, C. F.; Schenkel, F. S.; Miglior, F. (2020). The dynamic behavior of feed efficiency in primiparous dairy cattle. Journal of dairy science, 103(2), pp. 1528-1540. American Dairy Science Association 10.3168/jds.2019-17414

Butty, Adrien M.; Chud, Tatiane C. S.; Miglior, Filippo; Schenkel, Flavio S.; Kommadath, Arun; Krivushin, Kirill; Grant, Jason R.; Häfliger, Irene M.; Drögemüller, Cord; Cánovas, Angela; Stothard, Paul; Baes, Christine F. (2020). High confidence copy number variants identified in Holstein dairy cattle from whole genome sequence and genotype array data. Scientific reports, 10(1), p. 8044. Springer Nature 10.1038/s41598-020-64680-3

van Staaveren, Nienke; Leishman, Emily M.; Wood, Benjamin J.; Harlander-Matauschek, Alexandra; Baes, Christine F. (2020). Farmers' Perceptions About Health and Welfare Issues in Turkey Production. Frontiers in veterinary science, 7(332), p. 332. Frontiers Media 10.3389/fvets.2020.00332


Abdalla, Emhimad; Schenkel, Flavio S.; Emamgholi-Begli, Hakimeh; Willems, Owen; Van As, Pieter; Vanderhout, Ryley; Wood, Ben J.; Baes, Christine F. (2019). Single-step methodology for genomic evaluation in turkeys (Meleagris gallopavo). Frontiers in genetics, 10(1248), p. 1248. Frontiers Media SA 10.3389/fgene.2019.01248

Seymour, D.J.; Cánovas, A.; Baes, C. F.; Chud, T.C.S.; Osborne, V.R.; Cant, J.P.; Brito, L.F.; Gredler-Grandl, B.; Finocchiaro, R.; Veerkamp, R.F.; de Haas, Y.; Miglior, F. (2019). Invited review: Determination of large-scale individual dry matter intake phenotypes in dairy cattle. Journal of dairy science, 102(9), pp. 7655-7663. Elsevier 10.3168/jds.2019-16454

Richardson, C.M.; Baes, C. F.; Amer, P.R.; Quinton, C.; Martin, P.; Osborne, V.R.; Pryce, J.E.; Miglior, F. (2019). Determining the economic value of daily dry matter intake and associated methane emissions in dairy cattle. Animal, 14(1), pp. 171-179. Cambridge University Press 10.1017/S175173111900154X

Nayeri, S.; Schenkel, F.S.; Fleming, A.; Kroezen, V.; Sargolzaei, M.; Baes, C.; Cánovas, A.; Squires, J.; Miglior, F. (2019). Genome-wide association analysis for β-hydroxybutyrate concentration in Milk in Holstein dairy cattle. BMC genetics, 20(1), p. 58. BioMed Central 10.1186/s12863-019-0761-9

Guarini, A.R.; Lourenco, D.A.L.; Brito, L.F.; Sargolzaei, M.; Baes, C. F.; Miglior, F.; Tsuruta, S.; Misztal, I.; Schenkel, F.S. (2019). Use of a single-step approach for integrating foreign information into national genomic evaluation in Holstein cattle. Journal of dairy science, 102(9), pp. 8175-8183. Elsevier 10.3168/jds.2018-15819

Kommadath, Arun; Grant, Jason R; Krivushin, Kirill; Butty, Adrien M; Baes, Christine Francoise; Carthy, Tara R; Berry, Donagh P; Stothard, Paul (2019). A large interactive visual database of copy number variants discovered in taurine cattle. GigaScience, 8(6) Oxford University Press 10.1093/gigascience/giz073

Butty, Adrien M.; Sargolzaei, Mehdi; Miglior, Filippo; Stothard, Paul; Schenkel, Flavio S.; Gredler-Grandl, Birgit; Baes, Christine Francoise (2019). Optimizing Selection of the Reference Population for Genotype Imputation From Array to Sequence Variants. Frontiers in genetics, 10(510), p. 510. Frontiers Media SA 10.3389/fgene.2019.00510

Fleming, A.; Baes, C. F.; Martin, A.A.A.; Chud, T.C.S.; Malchiodi, F.; Brito, L.; Miglior, F. (2019). Symposium review: The choice and collection of new relevant phenotypes for fertility selection. Journal of dairy science, 102(4), pp. 3722-3734. Elsevier 10.3168/jds.2018-15470

Decina, Caitlin; Berke, Olaf; van Staaveren, Nienke; Baes, Christine F.; Widowski, Tina; Harlander-Matauschek, Alexandra (2019). An Investigation of Associations Between Management and Feather Damage in Canadian Laying Hens Housed in Furnished Cages. Animals, 9(4), p. 135. MDPI 10.3390/ani9040135

Baes, Christine F.; Makanjuola, B.; Miglior, F.; Marras, G.; Howard, J.T.; Fleming, A.; Maltecca, C. (2019). Symposium review: The genomic architecture of inbreeding: How homozygosity affects health and performance. Journal of dairy science, 102(3), pp. 2807-2817. Elsevier 10.3168/jds.2018-15520

Guarini, A.R.; Lourenco, D.A.L.; Brito, L.F.; Sargolzaei, M.; Baes, C. F.; Miglior, F.; Misztal, I.; Schenkel, F.S. (2019). Genetics and genomics of reproductive disorders in Canadian Holstein cattle. Journal of dairy science, 102(2), pp. 1341-1353. Elsevier 10.3168/jds.2018-15038

Jaton, C.; Schenkel, F. S.; Chud, T. C. S.; Malchiodi, F.; Sargolzaei, M.; Price, C. A.; Canovàs, A.; Baes, C.; Miglior, F. (2019). Genetic and genomic analyses of embryo production in dairy cattle. Reproduction, fertility, and development, 32(2), pp. 50-55. CSIRO Publishing 10.1071/RD19275

van Staaveren, Nienke van; Decina, Caitlin; Baes, Christine F.; Widowski, Tina M.; Berke, Olaf; Harlander-Matauschek, Alexandra (2019). Housing and Management Practices on 33 Pullet Farms in Canada. Animals, 9(2), p. 49. MDPI 10.3390/ani9020049

Guarini, A.R.; Sargolzaei, M.; Brito, L.F.; Kroezen, V.; Lourenco, D.A.L.; Baes, C. F.; Miglior, F.; Cole, J.B.; Schenkel, F.S. (2019). Estimating the effect of the deleterious recessive haplotypes AH1 and AH2 on reproduction performance of Ayrshire cattle. Journal of dairy science, 102(6), pp. 5315-5322. Elsevier 10.3168/jds.2018-15366

Martin, Pauline; Baes, C.; Houlahan, Kerry; Richardson, Caeli; Jamrozik, Janusz; Miglior, Filippo (2019). Genetic Correlations among Selected Traits in Canadian Holsteins. Canadian journal of animal science, 99(4), pp. 693-704. NRC Research Press 10.1139/CJAS-2018-0190

Massender, Erin; Brito, Luiz F; Cánovas, Angela; Baes, Christine F.; Kennedy, Delma; Schenkel, Flavio S (2019). A genetic evaluation of growth, ultrasound, and carcass traits at alternative slaughter endpoints in crossbred heavy lambs. Journal of animal science, 97(2), pp. 521-535. Oxford University Press 10.1093/jas/sky455

Emamgholi-Begli, H.; Wood, B.; Abdalla, E.; Balzani, A.; Willems, O.; Schenkel, F.S.; Harlander-Matauschek, A.; Baes, C. F. (2019). Genetic parameters for clutch and broodiness traits in turkeys (Meleagris Gallopavo) and their relationship with body weight and egg production. Poultry Science, 98(12), pp. 6263-6269. Oxford University Press 10.3382/ps/pez446

Decina, C.; Berke, O.; van Staaveren, N.; Baes, Christine F.; Harlander-Matauschek, A. (2019). Development of a Scoring System to Assess Feather Damage in Canadian Laying Hen Flocks. Animals, 9(7) MDPI 10.3390/ani9070436


Guarini, A.R.; Lourenco, D.A.L.; Brito, L.F.; Sargolzaei, M.; Baes, C. F.; Miglior, F.; Misztal, I.; Schenkel, F.S. (2018). Comparison of genomic predictions for lowly heritable traits using multi-step and single-step genomic best linear unbiased predictor in Holstein cattle. Journal of dairy science, 101(9), pp. 8076-8086. Elsevier 10.3168/jds.2017-14193

Stratz, Patrick; Schiller, Katja Franziska; Wellmann, Robin; Preuss, Siegfried; Baes, Christine Francoise; Bennewitz, Jörn (2018). Genetic parameter estimates and targeted association analyses of growth, carcass, and meat quality traits in German Merinoland and Merinoland-cross lambs. Journal of animal science, 96(2), pp. 398-406. American Society of Animal Science 10.1093/jas/sky012

Jaton, C.; Schenkel, F.S.; Sargolzaei, M.; Cánova, A.; Malchiodi, F.; Price, C.A.; Baes, C.; Miglior, F. (2018). Genome-wide association study and in silico functional analysis of the number of embryos produced by Holstein donors. Journal of dairy science, 101(8), pp. 7248-7257. Elsevier 10.3168/jds.2017-13848


Haberland, A. M.; Luther, H.; Hofer, A.; Tholen, E.; Simianer, H.; Lind, B.; Baes, C. (2014). Efficiency of different selection strategies against boar taint in pigs. Animal, 8(1), pp. 11-19. Cambridge University Press 10.1017/S1751731113001857


Baes, C.; Mattei, S.; Luther, H.; Ampuero, S.; Sidler, X.; Bee, G.; Spring, P.; Hofer, A. (2013). A performance test for boar taint compounds in live boars. Animal, 7(5), pp. 714-720. Cambridge University Press 10.1017/S1751731112002273

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