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García-Poyatos, Carolina; Arora, Prateek; Calvo, Enrique; Marques, Ines J; Kirschke, Nick; Galardi-Castilla, Maria; Lembke, Carla; Meer, Marco; Fernández-Montes, Paula; Ernst, Alexander; Haberthür, David; Hlushchuk, Ruslan; Vázquez, Jesús; Vermathen, Peter; Enríquez, José Antonio; Mercader, Nadia (2024). Cox7a1 controls skeletal muscle physiology and heart regeneration through complex IV dimerization. Developmental cell, 59(14), 1824-1841.e10. Elsevier 10.1016/j.devcel.2024.04.012
Blaskovic, Sanja; Anagnostopoulou, Pinelopi; Borisova, Elena; Schittny, Dominik; Donati, Yves; Haberthür, David; Zhou-Suckow, Zhe; Mall, Marcus A; Schlepütz, Christian M; Stampanoni, Marco; Barazzone-Argiroffo, Constance; Schittny, Johannes C (2023). Airspace Diameter Map-A Quantitative Measurement of All Pulmonary Airspaces to Characterize Structural Lung Diseases. Cells, 12(19) MDPI 10.3390/cells12192375
Labode, Jonas; Haberthür, David; Hlushchuk, Ruslan; Regin, Yannick; Gie, Andre George; Salaets, Thomas; Toelen, Jaan; Mühlfeld, Christian (2023). Location-specific pathology analysis of the monopodial pulmonary vasculature in a rabbit model of bronchopulmonary dysplasia-A pilot study. Physiological reports, 11(12), e15747. The American Physiological Society 10.14814/phy2.15747
Ghaznavi, Parastoo; Kadlag, Yogita; Haberthür, David; Hlushchuk, Ruslan; Leya, Ingo (2023). Is μCT irradiation nondestructive? A noble gas study on matrix samples from the CV3 chondrite Allende. Meteoritics & planetary science, 58(6), pp. 897-900. Wiley 10.1111/maps.13996
Jochum, Adrienne; Bochud, Estée; Haberthür, David; Lee, Harry G; Hlushchuk, Ruslan; Portell, Roger W (2023). Fossil Carychiidae (Eupulmonata, Ellobioidea) from the Lower Pleistocene Nashua Formation of Florida, with the description of a new species. Zookeys, 1167, pp. 89-107. Pensoft Publishers 10.3897/zookeys.1167.102840
Haberthür, David; Law, Mikki; Ford, Kassandra; Häsler, Marcel; Seehausen, Ole; Hlushchuk, Ruslan (2023). Microtomographic investigation of a large corpus of cichlids. PLoS ONE, 18(9), e0291003. Public Library of Science 10.1371/journal.pone.0291003
Kadlag, Yogita; Haberthür, David; Leya, Ingo; Hlushchuk, Ruslan; Mezger, Klaus (2023). Physical properties and average atomic numbers of chondrules using computed tomography. Planetary and space science, 238 Elsevier 10.1016/j.pss.2023.105799
Trappetti, Verdiana; Potez, Marine; Fernandez-Palomo, Cristian; Volarevic, Vladislav; Shintani, Nahoko; Pellicioli, Paolo; Ernst, Alexander; Haberthür, David; Fazzari, Jennifer M; Krisch, Michael; Laissue, Jean A; Anderson, Robin L; Martin, Olga A; Djonov, Valentin G (2022). Microbeam Radiation Therapy controls local growth of radioresistant melanoma and treats out-of-field locoregional metastasis. International journal of radiation oncology, biology, physics, 114(3), pp. 478-493. Elsevier 10.1016/j.ijrobp.2022.06.090
Newham, Elis; Gill, Pamela G; Benton, Michael J; Brewer, Philippa; Gostling, Neil J; Haberthür, David; Jernvall, Jukka; Kankanpää, Tuomas; Kallonen, Aki; Navarro, Charles; Pacureanu, Alexandra; Richards, Kelly; Robson Brown, Kate; Schneider, Philipp; Suhonen, Heikki; Tafforeau, Paul; Williams, Katherine; Zeller-Plumhoff, Berit; Corfe, Ian J (2022). Reply to: Revisiting life history and morphological proxies for early mammaliaform metabolic rates. Nature communications, 13(1), p. 5564. Nature Publishing Group 10.1038/s41467-022-32716-z
Laissue, Jean Albert; Barré, Sébastien; Bartzsch, Stefan; Blattmann, Hans; Bouchet, Audrey M.; Djonov, Valentin G.; Haberthür, David; Hlushchuk, Ruslan; Kaser-Hotz, Barbara; Laissue, Pierre Philippe; LeDuc, Géraldine; Reding, Susanne Oswald; Serduc, Raphaël (2022). Tolerance of Normal Rabbit Facial Bones and Teeth to Synchrotron X-Ray Microbeam Irradiation. Radiation research, 197(3), pp. 233-241. Radiation Research Society 10.1667/RADE-21-00032.1
Trappetti, Verdiana; Fernandez Palomo, Cristian; Smyth, Lloyd; Klein, Mitzi; Haberthür, David; Butler, Duncan; Barnes, Micah; Shintani, Nahoko; de Veer, Michael; Laissue, Jean A.; Vozenin, Marie C.; Djonov, Valentin (2021). Synchrotron Microbeam Radiotherapy for the treatment of lung carcinoma: a pre-clinical study. International journal of radiation oncology, biology, physics, 111(5), pp. 1276-1288. Elsevier 10.1016/j.ijrobp.2021.07.1717
Grothausmann, Roman; Labode, Jonas; Hernandez-Cerdan, Pablo; Haberthür, David; Hlushchuk, Ruslan; Lobachev, Oleg; Brandenberger, Christina; Gie, Andre George; Salaets, Thomas; Toelen, Jaan; Wagner, Willi L; Mühlfeld, Christian (2021). Combination of µCT and light microscopy for generation-specific stereological analysis of pulmonary arterial branches: a proof-of-concept study. Histochemistry and cell biology, 155(2), pp. 227-239. Springer-Verlag 10.1007/s00418-020-01946-x
Haberthür, David; Hlushchuk, Ruslan; Wolf, Thomas Gerhard (2021). Automated segmentation and description of the internal morphology of human permanent teeth by means of micro-CT. BMC Oral Health, 21(1), p. 185. BioMed Central 10.1186/s12903-021-01551-x
Gomez-Lazaro, Maria; Haberthür, David; Hlushchuk, Ruslan (2021). Computed tomography. In: Walter, Andreas; Mannheim, Julia G.; Caruana, Carmel J. (eds.) Imaging Modalities for Biological and Preclinical Research: A Compendium, Volume 2 (II.9-1). IOP Publishing 10.1088/978-0-7503-3747-2ch13
Nording, Henry; Baron, Lasse; Haberthür, David; Emschermann, Frederic; Mezger, Matthias; Sauter, Manuela; Sauter, Reinhard; Patzelt, Johannes; Knoepp, Kai; Nording, Anne; Meusel, Moritz; Meyer-Saraei, Roza; Hlushchuk, Ruslan; Sedding, Daniel; Borst, Oliver; Eitel, Ingo; Karsten, Christian M.; Feil, Robert; Pichler, Bernd; Erdmann, Jeanette; ... (2021). The C5a/C5a receptor 1 axis controls tissue neovascularization through CXCL4 release from platelets. Nature Communications, 12(1), p. 3352. Springer Nature 10.1038/s41467-021-23499-w
Halm, Sebastian; Haberthür, David; Eppler, Elisabeth; Djonov, Valentin Georgiev; Arnold, Andreas Michael (2021). Micro-CT imaging of Thiel-embalmed and iodine-stained human temporal bone for 3D modeling. Journal of Otolaryngology - Head and Neck Surgery, 50(1), p. 33. BioMed Central 10.1186/s40463-021-00522-0
Wolf, Thomas Gerhard; Anderegg, Andrea Lisa; Haberthür, David; Khoma, Oleksiy-Zakhar; Schumann, Sven; Boemke, Susanne; Wierichs, Richard Johannes; Hlushchuk, Ruslan (2021). Internal morphology of 101 mandibular canines of a Swiss-German population by means of micro-CT: An ex vivo study. Scientific reports, 11(1), p. 21281. Springer Nature 10.1038/s41598-021-00758-w
Lobachev, Oleg; Funatomi, Takuya; Pfaffenroth, Alexander; Forster, Reinhold; Knudsen, Lars; Wrede, Christoph; Guthe, Michael; Haberthür, David; Hlushchuk, Ruslan; Salaets, Thomas; Toelen, Jaan; Gaffling, Simone; Mühlfeld, Christian; Grothausmann, Roman (2021). Evaluating registrations of serial sections with distortions of the ground truths. IEEE Access, 9, pp. 152514-152535. IEEE 10.1109/ACCESS.2021.3124341
Haberthür, David; Yao, Eveline; Barré, Sébastien F.; Cremona, Tiziana P.; Tschanz, Stefan A.; Schittny, Johannes C. (2021). Pulmonary acini exhibit complex changes during postnatal rat lung development. PLoS ONE, 16(11), e0257349. Public Library of Science 10.1371/journal.pone.0257349
Bochud, Estée; Haberthür, David; Hlushchuk, Ruslan; Neubert, Eike (2021). A new Diancta species of the family Diplommatinidae (Cyclophoroidea) from Vanua Levu Island, Fiji. Zookeys, 1073, pp. 1-12. Pensoft Publishers 10.3897/zookeys.1073.73241
Zubler, Cédric; Haberthür, David; Hlushchuk, Ruslan; Djonov, Valentin; Constantinescu, Mihai; Olariu, Radu (2020). The anatomical reliability of the Superficial Circumflex Iliac Artery Perforator (SCIP) Flap. Annals of anatomy - Anatomischer Anzeiger, 234, p. 151624. Elsevier 10.1016/j.aanat.2020.151624
Newham, Elis; Gill, Pamela G; Brewer, Philippa; Benton, Michael J; Fernandez, Vincent; Gostling, Neil J; Haberthür, David; Jernvall, Jukka; Kankaanpää, Tuomas; Kallonen, Aki; Navarro, Charles; Pacureanu, Alexandra; Richards, Kelly; Brown, Kate Robson; Schneider, Philipp; Suhonen, Heikki; Tafforeau, Paul; Williams, Katherine A; Zeller-Plumhoff, Berit and Corfe, Ian J (2020). Reptile-like physiology in Early Jurassic stem-mammals. Nature communications, 11(1), p. 5121. 10.1038/s41467-020-18898-4
Wüthrich, Tsering Monika; Lese, Ioana; Haberthür, David; Zubler, Cédric Olivier; Hlushchuk, Ruslan; Hewer, Ekkehard; Maistriaux, Louis; Gianello, Pierre; Lengelé, Benoît; Rieben, Robert; Vögelin, Esther; Olariu, Radu; Duisit, Jérôme; Taddeo, Adriano (2020). Development of vascularized nerve scaffold using perfusion-decellularization and recellularization. Materials science & engineering C, 117(111311), p. 111311. Elsevier 10.1016/j.msec.2020.111311
Messerli, Matthias; Aaldijk, Dea; Haberthür, David; Röss, Helena; García-Poyatos, Carolina; Sande-Melón, Marcos; Khoma, Oleksiy-Zakhar; Wieland, Fluri A. M.; Fark, Sarya; Djonov, Valentin (2020). Adaptation mechanism of the adult zebrafish respiratory organ to endurance training. PLoS ONE, 15(2), e0228333. Public Library of Science 10.1371/journal.pone.0228333
Hlushchuk, Ruslan; Haberthür, David; Soukup, Petr; Barré, Sebastien F.; Khoma, Oleksiy-Zakhar; Schittny, Johannes; Haghayegh Jahromi, Neda; Bouchet, Audrey; Engelhardt, Britta; Djonov, Valentin Georgiev (2020). Innovative high-resolution microCT imaging of animal brain vasculature. Brain structure & function, 225(9), pp. 2885-2895. Springer 10.1007/s00429-020-02158-8
Hlushchuk, Ruslan; Haberthür, David; Djonov, Valentin (2019). Ex vivo microangioCT: Advances in microvascular imaging. Vascular pharmacology, 112, pp. 2-7. Elsevier 10.1016/j.vph.2018.09.003
Ghafar, Abdul; Parikka, Kirsti; Haberthür, David; Tenkanen, Maija; Mikkonen, Kirsi S; Suuronen, Jussi-Petteri (2017). Synchrotron Microtomography Reveals the Fine Three-Dimensional Porosity of Composite Polysaccharide Aerogels. Materials, 10(8) MDPI 10.3390/ma10080871
Haberthür, David; Hlushchuk, Ruslan; Potez, Marine Thérèse Charlette; Bouchet, Audrey Michele; Djonov, Valentin (13 June 2017). Quantitative assessment of brain tumor radiation treatment reveals decrease in tumor-supporting vessels (Unpublished). In: 12th annual Bruker microCT User Meeting. Bruxelles, Belgium. June 13, 2017.
Schaad, Laura; Hlushchuk, Ruslan; Barré, Sébastien; Gianni-Barrera, Roberto; Haberthür, David; Banfi, Andrea; Djonov, Valentin (2017). Correlative Imaging of the Murine Hind Limb Vasculature and Muscle Tissue by MicroCT and Light Microscopy. Scientific Reports, 7(41842), p. 41842. Nature Publishing Group 10.1038/srep41842
Barré, Sébastien F; Haberthür, David; Cremona, Tiziana Patrizia; Stampanoni, Marco; Schittny, Johannes C (2016). The total number of acini remains constant throughout postnatal rat lung development. American journal of physiology - lung cellular and molecular physiology, 311(6), L1082-L1089. American Physiological Society 10.1152/ajplung.00325.2016
Barré, Sébastien; Haberthür, David; Stampanoni, Marco; Schittny, Johannes (2014). Efficient estimation of the total number of acini in adult rat lung. Physiological reports, 2(7), e12063. The American Physiological Society 10.14814/phy2.12063
Haberthür, David; Barré, Sébastien; Tschanz, Stefan A.; Yao, Eveline; Stampanoni, Marco; Schittny, Johannes (2013). Visualization and stereological characterization of individual rat lung acini by high-resolution X-ray tomographic microscopy. Journal of applied physiology, 115(9), pp. 1379-1387. Bethesda, Md.: American Physiological Society 10.1152/japplphysiol.00642.2013
Henry, F S; Haber, S; Haberthür, David; Filipovic, N; Milasinovic, D; Schittny, Johannes C.; Tsuda, A (2012). The simultaneous role of an alveolus as flow mixer and flow feeder for the deposition of inhaled submicron particles. Journal of biomechanical engineering, 134(12), p. 121001. New York, N.Y.: American Society of Mechanical Engineers ASME 10.1115/1.4007949
Haberthür, David; Lutter, Georg; Appel, Marie; Attmann, Tim; Schramm, René; Schmitz, Christoph; Quaden, René Bombien (2011). Percutaneous aortic valve replacement: valvuloplasty studies in vitro. European journal of cardio-thoracic surgery, 39(5), pp. 631-4. Oxford: Elsevier Science B.V. 10.1016/j.ejcts.2010.07.045
Rausch, S M K; Haberthür, D; Stampanoni, M; Schittny, J C; Wall, W A (2011). Local strain distribution in real three-dimensional alveolar geometries. Annals of biomedical engineering, 39(11), pp. 2835-43. Cambridge: Springer 10.1007/s10439-011-0328-z
Schittny, Johannes; Barré, Sébastien; Mokso, R.; Haberthür, David; Semmler-Behnke, M.; Kreyling, W. G.; Tsuda, A.; Stampanoni, M.; McNulty, Ian; Eyberger, Catherine; Lai, Barry (2011). High-Resolution Phase-Contrast Imaging of Submicron Particles in Unstained Lung Tissue. AIP conference proceedings, 1365, pp. 384-387. American Institute of Physics 10.1063/1.3625383
Haberthür, David (2010). High Resolution tomographic imaging of the alveolar region of the mammalian lung. (Dissertation, University of Bern, Faculty of Medicine)
Haberthür, David; Hintermüller, Christoph; Marone, Federica; Schittny, Johannes C; Stampanoni, Marco (2010). Radiation dose optimized lateral expansion of the field of view in synchrotron radiation X-ray tomographic microscopy. Journal of synchrotron radiation, 17(5), pp. 590-9. Oxford: Blackwell Publishing 10.1107/S0909049510019618
Haberthür, D; Semmler-Behnke, M; Takenaka, S; Kreyling, W.G.; Stampanoni, M; Tsuda, A; Schittny, J.C. (2009). Multimodal imaging for the detection of sub-micron particles in the gas-exchange retion of the mammalian lung. Journal of Physics: Conference Series, 186(1), 012040. Bristol: Institute of Physics Publishing IOP 10.1088/1742-6596/186/1/012040
Tsuda, A; Filipovic, N; Haberthür, D; Dickie, R; Matsui, Y; Stampanoni, M; Schittny, J C (2008). Finite element 3D reconstruction of the pulmonary acinus imaged by synchrotron X-ray tomography. Journal of applied physiology, 105(3), pp. 964-76. Bethesda, Md.: American Physiological Society 10.1152/japplphysiol.90546.2008
