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Jetishi, Clirim; Balmer, Erina A; Berger, Bianca M; Faso, Carmen; Ochsenreiter, Torsten (2024). Expansion of metabolically labelled endocytic organelles and cytoskeletal cell structures in Giardia lamblia using optimised U-ExM protocols. Microbial cell, 11, pp. 198-206. Shared Science Publishers OG 10.15698/mic2024.06.825
Atchou, Kodzo; Berger, Bianca Manuela; Heussler, Volker; Ochsenreiter, Torsten (2023). Pre-gelation staining expansion microscopy (PS-ExM) for visualisation of the Plasmodium liver stage. Journal of cell science, 136(22) Company of Biologists 10.1242/jcs.261377
Amodeo, Simona; Bregy, Irina; Ochsenreiter, Torsten (2023). Mitochondrial genome maintenance - the kinetoplast story. FEMS microbiology reviews, 47(6) Blackwell Publishing Ltd 10.1093/femsre/fuac047
Amodeo, Simona; Bregy, Irina; Hoffmann, Anneliese; Fradera-Sola, Albert; Kern, Mara; Baudouin, Hélène; Zuber, Benoît; Butter, Falk; Ochsenreiter, Torsten (2023). Characterization of two novel proteins involved in mitochondrial DNA anchoring in Trypanosoma brucei. PLoS pathogens, 19(7), e1011486. Public Library of Science 10.1371/journal.ppat.1011486
Aeschlimann, Salome; Kalichava, Ana; Schimanski, Bernd; Berger, Bianca Manuela; Jetishi, Clirim; Stettler, Philip; Ochsenreiter, Torsten; Schneider, André (2022). Single p197 molecules of the mitochondrial genome segregation system of Trypanosoma brucei determine the distance between basal body and outer membrane. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 119(40), e2204294119. National Academy of Sciences NAS 10.1073/pnas.2204294119
Dewar, Caroline E; Oeljeklaus, Silke; Mani, Jan; Mühlhäuser, Wignand W D; von Känel, Corinne; Zimmermann, Johannes; Ochsenreiter, Torsten; Warscheid, Bettina; Schneider, André (2022). Mistargeting of aggregation prone mitochondrial proteins activates a nucleus-mediated posttranscriptional quality control pathway in trypanosomes. Nature Communications, 13(1), p. 3084. Springer Nature 10.1038/s41467-022-30748-z
Kalichava, Ana; Ochsenreiter, Torsten (2021). Ultrastructure expansion microscopy in Trypanosoma brucei. Open Biology, 11(10), p. 210132. The Royal Society Publishing 10.1098/rsob.210132
Amodeo, Simona; Kalichava, Ana; Fradera-Sola, Albert; Bertiaux-Lequoy, Eloïse; Guichard, Paul; Butter, Falk; Ochsenreiter, Torsten (2021). Characterization of the novel mitochondrial genome segregation factor TAP110 in Trypanosoma brucei. Journal of cell science, 134(5) Company of Biologists Limited 10.1242/jcs.254300
Baudouin, Hélène Clémentine Margareta; Pfeiffer, Laura; Ochsenreiter, Torsten (2020). A comparison of three approaches for the discovery of novel tripartite attachment complex proteins in Trypanosoma brucei. PLoS neglected tropical diseases, 14(9), e0008568. Public Library of Science 10.1371/journal.pntd.0008568
Aphasizheva, Inna; Alfonzo, Juan; Carnes, Jason; Cestari, Igor; Cruz-Reyes, Jorge; Göringer, H. Ulrich; Hajduk, Stephen; Lukeš, Julius; Madison-Antenucci, Susan; Maslov, Dmitri A.; McDermott, Suzanne M.; Ochsenreiter, Torsten; Read, Laurie K.; Salavati, Reza; Schnaufer, Achim; Schneider, André; Simpson, Larry; Stuart, Kenneth; Yurchenko, Vyacheslav; Zhou, Z. Hong; ... (2020). Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes. Trends in parasitology, 36(4), pp. 337-355. Elsevier Current Trends 10.1016/j.pt.2020.01.006
Cooper, Sinclair; Wadsworth, Elizabeth S; Ochsenreiter, Torsten; Ivens, Alasdair; Savill, Nicholas J; Schnaufer, Achim (2019). Assembly and annotation of the mitochondrial minicircle genome of a differentiation-competent strain of Trypanosoma brucei. Nucleic acids research, 47(21), pp. 11304-11325. Oxford University Press 10.1093/nar/gkz928
Schneider, André; Ochsenreiter, Torsten (2018). Failure is not an option – mitochondrial genome segregation in trypanosomes. Journal of cell science, 131(18), jcs221820. Company of Biologists Limited 10.1242/jcs.221820
Jojic, Borka; Amodeo, Simona; Ochsenreiter, Torsten (2018). The translationally controlled tumor protein TCTP is involved in cell cycle progression and heat stress response in the bloodstream form of Trypanosoma brucei. Microbial cell, 5(10), pp. 460-468. Shared Science Publishers OG 10.15698/mic2018.10.652
Jojic, Borka; Amodeo, Simona; Bregy, Irina; Ochsenreiter, Torsten (2018). Distinct 3′ UTRs regulate the life-cycle-specific expression of two TCTP paralogs in Trypanosoma brucei. Journal of cell biology, 131(9) Rockefeller Institute Press 10.1242/jcs.206417
Amodeo, Simona; Jakob, Martin; Ochsenreiter, Torsten (2018). Characterization of the novel mitochondrial genome replication factor MiRF172 in Trypanosoma brucei. Journal of cell science, 131(8) Company of Biologists Limited 10.1242/jcs.211730
Hoffmann, Anneliese; Käser, Sandro; Jakob, Martin; Amodeo, Simona; Peitsch, Camille Françoise; Týč, Jiří; Vaughan, Sue; Zuber, Benoît; Schneider, André; Ochsenreiter, Torsten (2018). Molecular model of the mitochondrial genome segregation machinery in Trypanosoma brucei. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 115(8), E1809-E1818. National Academy of Sciences NAS 10.1073/pnas.1716582115
Cirovic, Olivera; Trikin, Roman; Hoffmann, Anneliese; Doiron, Nicholas; Jakob, Martin; Ochsenreiter, Torsten (2017). The nuclear RNA binding protein RBP33 influences mRNA and spliced leader RNA abundance in Trypanosoma brucei. Molecular and biochemical parasitology, 212, pp. 16-20. Elsevier 10.1016/j.molbiopara.2016.12.008
Jakob, Martin; Hoffmann, Anneliese; Amodeo, Simona; Peitsch, Camille; Zuber, Benoît; Ochsenreiter, Torsten (2016). Mitochondrial growth during the cell cycle of Trypanosoma brucei bloodstream forms. Scientific Reports, 6(36565), p. 36565. Nature Publishing Group 10.1038/srep36565
Hoffmann, Anneliese; Jakob, Martin; Ochsenreiter, Torsten (2016). A novel component of the mitochondrial genome segregation machinery in trypanosomes. Microbial cell, 3(8), pp. 352-354. Shared Science Publishers OG 10.15698/mic2016.08.519
Trikin, Roman; Doiron, Nicholas; Hoffmann, Anneliese; Haenni, Beat; Jakob, Martin; Schnaufer, Achim; Schimanski, Bernd; Zuber, Benoît; Ochsenreiter, Torsten (2016). Correction: TAC102 Is a Novel Component of the Mitochondrial Genome Segregation Machinery in Trypanosomes. PLoS pathogens, 12(7), e1005750. Public Library of Science 10.1371/journal.ppat.1005750
Trikin, Roman; Doiron, Nicholas; Hoffmann, Anneliese; Haenni, Beat; Jakob, Martin; Schnaufer, Achim; Schimanski, Bernd; Zuber, Benoît; Ochsenreiter, Torsten (2016). TAC102 Is a Novel Component of the Mitochondrial Genome Segregation Machinery in Trypanosomes. PLoS pathogens, 12(5), e1005586. Public Library of Science 10.1371/journal.ppat.1005586
Naguleswaran, Arunasalam; Gunasekera, Kapila; Schimanski, Bernd; Heller, Manfred; Hemphill, Andrew; Ochsenreiter, Torsten; Roditi, Isabel (2015). Trypanosoma brucei RRM1 is a nuclear RNA-binding protein and modulator of chromatin structure. mBio, 6(2), e00114. American Society for Microbiology 10.1128/mBio.00114-15
Fügi, Matthias A; Gunasekera, Kapila; Ochsenreiter, Torsten; Guan, Xueli; Wenk, Markus R; Mäser, Pascal (2014). Genome profiling of sterol synthesis shows convergent evolution in parasites and guides chemotherapeutic attack. Journal of lipid research, 55(5), pp. 929-938. American Society for Biochemistry and Molecular Biology ASBMB 10.1194/jlr.M048017
Schnarwiler, Felix; Niemann, Moritz; Doiron, Nicholas; Harsman, Anke Judith; Käser, Sandro; Mani, Jan; Chanfon, Astrid; Dewar, C. E.; Oeljeklaus, S.; Jackson, Christopher; Pusnik, M.; Schmidt, O.; Meisinger, C.; Hiller, S.; Warscheid, B.; Schnaufer, A. C.; Ochsenreiter, Torsten; Schneider, André (2014). Trypanosomal TAC40 constitutes a novel subclass of mitochondrial -barrel proteins specialized in mitochondrial genome inheritance. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 111(21), pp. 7624-7629. National Academy of Sciences NAS 10.1073/pnas.1404854111
Cirovic, Olivera; Ochsenreiter, Torsten (2014). Whole proteome analysis of the protozoan parasite Trypanosoma brucei using stable isotope labeling by amino acids in cell culture and mass spectrometry. Methods in molecular biology, 1188, pp. 47-55. Springer 10.1007/978-1-4939-1142-4_4
Cirovic, Olivera; Ochsenreiter, Torsten (2013). Whole Proteome Analysis of the Protozoan Parasite Trypanosoma brucei using Stable Isotope Labeling by Amino Acids in Cell Culture and Mass Spectrometry. In: SILAC. Methods in Molecular Biology. Heidelberg: Springer
Rettig, Jochen; Wang, Yimu M.; Schneider, André; Ochsenreiter, Torsten (2012). Dual targeting of isoleucyl-tRNA synthetase in Trypanosoma brucei is mediated through alternative trans-splicing. Nucleic acids research, 40(3), pp. 1299-1306. London: Oxford University Press 10.1093/nar/gkr794
Gunasekera, Kapila; Wüthrich, Daniel; Braga-Lagache, Sophie; Heller, Manfred; Ochsenreiter, Torsten (2012). Proteome remodelling during development from blood to insect-form Trypanosoma brucei quantified by SILAC and mass spectrometry. BMC Genomics, 13, p. 556. London: BioMed Central 10.1186/1471-2164-13-556
Ekanayake, D.; Minning, T.; Weatherly, B.; Gunasekera, K.; Nilsson, D.; Tarleton, R.; Ochsenreiter, T.; Sabatini, R. (2011). Epigenetic regulation of transcription and virulence in Trypanosoma cruzi by O-linked thymine glucosylation of DNA. Molecular and cellular biology, 31(8), pp. 1690-1700. Washington, D.C.: American Society for Microbiology 10.1128/MCB.01277-10
Siegel, N.T.; Gunasekera, K.; Cross, G.A.; Ochsenreiter, T. (2011). Gene expression in Trypanosoma brucei: lessons from high throughput RNA sequencing. Trends in parasitology, 27(10), pp. 434-441. Oxford: Elsevier Current Trends 10.1016/j.pt.2011.05.006
Nilsson, Daniel; Gunasekera, Kapila; Mani, Jan; Osteras, Magne; Farinelli, Laurent; Baerlocher, Loic; Roditi, Isabel; Ochsenreiter, Torsten (2010). Spliced leader trapping reveals widespread alternative splicing patterns in the highly dynamic transcriptome of Trypanosoma brucei. PLoS pathogens, 6(8), e1001037. San Francisco, Calif.: Public Library of Science 10.1371/journal.ppat.1001037
Hajduk, Stephen; Ochsenreiter, Torsten (2010). RNA editing in kinetoplastids. RNA biology, 7(2), pp. 229-36. Georgetown, Tex.: Landes Bioscience 10.4161/rna.7.2.11393
Zhang, Xiaobai; Cui, Juan; Nilsson, Daniel; Gunasekera, Kapila; Chanfon, Astrid; Song, Xiaofeng; Wang, Huinan; Xu, Ying; Ochsenreiter, Torsten (2010). The Trypanosoma brucei MitoCarta and its regulation and splicing pattern during development. Nucleic acids research, 38(21), pp. 7378-87. London: Oxford University Press 10.1093/nar/gkq618
