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Giudici, Nicola; Seiler, Roland (2024). Histologic subtypes of non-muscle invasive bladder cancer. World journal of clinical oncology, 15(7), pp. 835-839. Baishideng Publishing Group 10.5306/wjco.v15.i7.835
Brennen, W Nathaniel; Le Magnen, Clémentine; Karkampouna, Sofia; Anselmino, Nicolas; Bock, Nathalie; Choo, Nicholas; Clark, Ashlee K; Coleman, Ilsa M; Dolgos, Robin; Ferguson, Alison M; Goode, David L; Kruithof-de Julio, Marianna; Navone, Nora M; Nelson, Peter S; O'Neill, Edward; Porter, Laura H; Ranasinghe, Weranja; Sunada, Takuro; Williams, Elizabeth D; Butler, Lisa M; ... (2024). Defining the challenges and opportunities for using patient-derived models in prostate cancer research. The Prostate, 84(7), pp. 623-635. Wiley 10.1002/pros.24682
Ovchinnikova, Katja; Born, Jannis; Chouvardas, Panagiotis; Rapsomaniki, Marianna; Kruithof-de Julio, Marianna (2024). Overcoming limitations in current measures of drug response may enable AI-driven precision oncology. NPJ precision oncology, 8(95) Springer Nature 10.1038/s41698-024-00583-0
Dhaka, Bhavya; Zimmerli, Marc; Hanhart, Daniel; Moser, Mario B; Guillen-Ramirez, Hugo; Mishra, Sanat; Esposito, Roberta; Polidori, Taisia; Widmer, Maro; García-Pérez, Raquel; Kruithof-de Julio, Marianna; Pervouchine, Dmitri; Melé, Marta; Chouvardas, Panagiotis; Johnson, Rory (2024). Functional identification of cis-regulatory long noncoding RNAs at controlled false discovery rates. Nucleic acids research, 52(6), pp. 2821-2835. Oxford University Press 10.1093/nar/gkae075
Hashemi Gheinani, Ali; Kim, Jina; You, Sungyong; Adam, Rosalyn M (2024). Bioinformatics in urology - molecular characterization of pathophysiology and response to treatment. Nature Reviews. Urology, 21(4), pp. 214-242. Nature Publishing Group 10.1038/s41585-023-00805-3
Bigger-Allen, Alexander; Hashemi Gheinani, Ali; Adam, Rosalyn M (2024). Investigation of the impact of bromodomain inhibition on cytoskeleton stability and contraction. Cell communication and signaling, 22(1) BioMed Central 10.1186/s12964-024-01553-6
Hanhart, Daniel; Gossi, Federico; Rapsomaniki, Maria Anna; Kruithof-de Julio, Marianna; Chouvardas, Panagiotis (2024). ScLinear predicts protein abundance at single-cell resolution. Communications biology, 7(267) Springer Nature 10.1038/s42003-024-05958-4
Alaimo, Alessandro; Genovesi, Sacha; Annesi, Nicole; De Felice, Dario; Subedi, Saurav; Macchia, Alice; La Manna, Federico; Ciani, Yari; Vannuccini, Federico; Mugoni, Vera; Notarangelo, Michela; Libergoli, Michela; Broso, Francesca; Taulli, Riccardo; Ala, Ugo; Savino, Aurora; Cortese, Martina; Mirzaaghaei, Somayeh; Poli, Valeria; Bonapace, Ian Marc; ... (2024). Sterile inflammation via TRPM8 RNA-dependent TLR3-NF-kB/IRF3 activation promotes antitumor immunity in prostate cancer. The EMBO journal, 43(5), pp. 780-805. EMBO Press 10.1038/s44318-024-00040-5
Giudici, Nicola; Blarer, Jennifer; Sathianathen, Niranjan; Burkhard, Fiona C.; Wüthrich, Patrick Y.; Thalmann, George N.; Seiler, Roland; Furrer, Marc A. (2024). Diagnostic Value of Urine Cytology in Pharmacologically Forced Diuresis for Upper Tract Urothelial Carcinoma Diagnosis and Follow-Up. Cancers, 16(4) MDPI AG 10.3390/cancers16040758
Akshay, Akshay; Hashemi Gheinani, Ali; Besic, Mustafa; Braga, Sophie; Uldry, Anne-Christine; Heller, Manfred; Rehrauer, Hubert; Fournier, Catharine Aquino; Burkhard, Fiona C; Monastyrskaya, Katia (2024). De-obstruction of bladder outlet in humans reverses organ remodelling by normalizing the expression of key transcription factors. BMC urology, 24(33) BMC 10.1186/s12894-024-01417-8
Akshay, Akshay; Besic, Mustafa; Kuhn, Annette; Burkhard, Fiona C; Bigger-Allen, Alex; Adam, Rosalyn M; Monastyrskaya, Katia; Hashemi Gheinani, Ali (2024). Machine Learning-Based Classification of Transcriptome Signatures of Non-Ulcerative Bladder Pain Syndrome. International journal of molecular sciences, 25(3) MDPI 10.3390/ijms25031568
Akshay, Akshay; Katoch, Mitali; Shekarchizadeh, Navid; Abedi, Masoud; Sharma, Ankush; Burkhard, Fiona C; Adam, Rosalyn M; Monastyrskaya, Katia; Hashemi Gheinani, Ali (2024). Machine Learning Made Easy (MLme): a comprehensive toolkit for machine learning-driven data analysis. GigaScience, 13, pp. 1-9. Oxford University Press 10.1093/gigascience/giad111
Küper, Alina T; Kersting, David; Telli, Tugce; Herrmann, Ken; Rominger, Axel; Afshar-Oromieh, Ali; Lopes, Leonor; Karkampouna, Sofia; Shi, Kuangyu; Kim, Moon; Hadaschik, Boris; Darr, Christopher; Umutlu, Lale; Fendler, Wolfgang P; Seifert, Robert (2024). PSMA-PET follow-up to assess response in patients not receiving PSMA therapy: Is there value beyond localization of disease? Theranostics, 14(9), pp. 3623-3633. Ivyspring International 10.7150/thno.96738
Hashemi Gheinani, Ali; Sack, Bryan S; Bigger-Allen, Alex; Thaker, Hatim; Atta, Hussein; Lambrinos, George; Costa, Kyle; Doyle, Claire; Gharaee-Kermani, Mehrnaz; Patalano, Susan; Piper, Mary; Cotellessa, Justin F; Vitko, Dijana; Li, Haiying; Prabhakaran, Manubhai Kadayil; Cristofaro, Vivian; Froehlich, John; Lee, Richard S; Yang, Wei; Sullivan, Maryrose P; ... (10 December 2023). Integrated omics analysis unveils a DNA damage response to neurogenic injury. (bioRxiv). Cold Spring Harbor Laboratory 10.1101/2023.12.10.571015
Esposito, Roberta; Lanzos, Andrés; Uroda, Tina; Ramnarayanan, Sunandini; Büchi, Isabel; Polidori, Taisia; Guillen-Ramirez, Hugo; Mihaljevic, Ante; Merlin, Bernard Mefi; Mela, Lia; Zoni, Eugenio; Hovhannisyan, Lusine; McCluggage, Finn; Medo, Matúš; Basile, Giulia; Meise, Dominik F; Zwyssig, Sandra; Wenger, Corina; Schwarz, Kyriakos; Vancura, Adrienne; ... (2023). Author Correction: Tumour mutations in long noncoding RNAs enhance cell fitness. Nature communications, 14(1), p. 5463. Nature Publishing Group 10.1038/s41467-023-41288-5
La Manna, Federico; Hanhart, Daniel; Kloen, Peter; van Wijnen, Andre J; Thalmann, George; Kruithof-de Julio, Marianna; Chouvardas, Panagiotis (2023). Molecular profiling of osteoprogenitor cells reveals FOS as a master regulator of bone non-union. Gene, 874(147481), p. 147481. Elsevier 10.1016/j.gene.2023.147481
Huber, Markus; Furrer, Marc A; Jardot, François; Engel, Dominique; Beilstein, Christian M; Burkhard, Fiona C; Wüthrich, Patrick Y (2023). Impact of Intraoperative Fluid Balance and Norepinephrine on Postoperative Acute Kidney Injury after Cystectomy and Urinary Diversion over Two Decades: A Retrospective Observational Cohort Study. Journal of clinical medicine, 12(13) MDPI 10.3390/jcm12134554
Akshay, Akshay; Katoch, Mitali; Shekarchizadeh, Navid; Abedi, Masoud; Sharma, Ankush; Burkhard, Fiona C.; Adam, Rosalyn M; Monastyrskaya, Katia; Hashemi Gheinani, Ali (4 July 2023). Machine Learning Made Easy (MLme): A Comprehensive Toolkit for Machine Learning-Driven Data Analysis. (bioRxiv). Cold Spring Harbor Laboratory 10.1101/2023.07.04.546825
Christensen, Emil; Wyatt, Alexander W; Galsky, Matthew D; Grivas, Petros; Seiler, Roland; Nawroth, Roman; Goebell, Peter J; Schmitz-Drager, Bernd J; Williams, Stephen B; Black, Peter C; Kamat, Ashish M; Todenhöfer, Tilman; Dyrskjøt, Lars (2023). IBCN Seminar Series 2021: Circulating tumor DNA in bladder cancer. Urologic oncology - seminars and original investigations, 41(7), pp. 318-322. Elsevier 10.1016/j.urolonc.2022.11.008
Hensley, Patrick J; Seiler, Roland; Herr, Harry; Mouw, Kent W; Iyer, Gopa; Dyrskjøt, Lars; Nawroth, Roman; Goebell, Peter; Schmitz-Drager, Bernd; Todenhofer, Tilman; Black, Peter C; Kamat, Ashish M; Williams, Stephen B (2023). Bladder preservation after neoadjuvant therapy - 2021 IBCN updates part 1. Urologic oncology - seminars and original investigations, 41(7), pp. 307-312. Elsevier 10.1016/j.urolonc.2023.01.001
Akshay, Akshay; Katoch, Mitali; Abedi, Masoud; Besic, Mustafa; Shekarchizadeh, Navid; Burkhard, Fiona C.; Bigger-Allen, Alex; Adam, Rosalyn M; Monastyrskaya, Katia; Hashemi Gheinani, Ali (28 June 2023). SpheroScan: A User-Friendly Deep Learning Tool for Spheroid Image Analysis. (bioRxiv). Cold Spring Harbor Laboratory 10.1101/2023.06.28.533479
Augspach, Anke Katharina; Drake, Kyle D; Roma, Luca; Qian, Ellen; Lee, Se Ri; Clarke, Declan; Kumar, Sushant; Jaquet, Muriel; Gallon, John; Bolis, Marco; Triscott, Joanna Catherine Caprio; Galván, José A; Chen, Yu; Thalmann, George N; Kruithof-de Julio, Marianna; Theurillat, Jean-Philippe P; Wuchty, Stefan; Gerstein, Mark; Piscuoglio, Salvatore; Kanadia, Rahul N; ... (2023). Minor intron splicing is critical for survival of lethal prostate cancer. Molecular cell, 83(12), 1983-2002.e11. Cell Press 10.1016/j.molcel.2023.05.017
Esposito, Roberta; Lanzós, Andrés; Uroda, Tina; Ramnarayanan, Sunandini; Büchi, Isabel; Polidori, Taisia; Guillen-Ramirez, Hugo; Mihaljevic, Ante; Merlin, Bernard Mefi; Lia, Mela; Zoni, Eugenio; Hovhannisyan, Lusine; McCluggage, Finn; Medo, Matúš; Basile, Giulia; Meise, Dominik F; Zwyssig, Sandra; Wenger, Corina; Schwarz, Kyriakos; Vancura, Adrienne; ... (2023). Tumour mutations in long noncoding RNAs enhance cell fitness. Nature communications, 14(1), p. 3342. Nature Publishing Group 10.1038/s41467-023-39160-7
Gil-Jimenez, Alberto; van Dorp, Jeroen; Contreras-Sanz, Alberto; van der Vos, Kristan; Vis, Daniel J; Braaf, Linde; Broeks, Annegien; Kerkhoven, Ron; van Kessel, Kim E M; Ribal, María José; Alcaraz, Antonio; Wessels, Lodewyk F A; Seiler, Roland; Wright, Jonathan L; Mengual, Lourdes; Boormans, Joost; van Rhijn, Bas W G; Black, Peter C; van der Heijden, Michiel S (2023). Corrigendum to "Assessment of Predictive Genomic Biomarkers for Response to Cisplatin-based Neoadjuvant Chemotherapy in Bladder Cancer" [Eur Urol 2023;83:313-17]. European urology, 83(6), e165. Elsevier 10.1016/j.eururo.2023.03.002
Gossi, Federico; Pati, Pushpak; Chouvardas, Panagiotis; Martinelli, Adriano Luca; Kruithof-de Julio, Marianna; Rapsomaniki, Maria Anna (2023). Matching single cells across modalities with contrastive learning and optimal transport. Briefings in bioinformatics, 24(3) Oxford University Press 10.1093/bib/bbad130
Seiler, Roland; Egger, Martin; De Menna, Marta; Wehrli, Saskia; Minoli, Martina; Radić, Martina; Lyatoshinsky, Pavel; Hösli, Raphael; Blarer, Jennifer; Abt, Dominik; Kruithof-de Julio, Marianna (2023). Guidance of adjuvant instillation in intermediate-risk non-muscle invasive bladder cancer by drug screens in patient derived organoids: a single center, open-label, phase II trial. BMC urology, 23(1), p. 89. BMC 10.1186/s12894-023-01262-1
Minoli, Martina; Cantore, Thomas; Hanhart, Daniel; Kiener, Mirjam; Fedrizzi, Tarcisio; La Manna, Federico; Karkampouna, Sofia; Chouvardas, Panagiotis; Genitsch, Vera; Rodriguez-Calero, Antonio; Compérat, Eva; Klima, Irena; Gasperini, Paola; Kiss, Bernhard; Seiler, Roland; Demichelis, Francesca; Thalmann, George N; Kruithof-de Julio, Marianna (2023). Bladder cancer organoids as a functional system to model different disease stages and therapy response. Nature Communications, 14(1), p. 2214. Springer Nature 10.1038/s41467-023-37696-2
Gallon, John; Rodríguez-Calero, Antonio; Benjak, Andrej; Akhoundova, Dilara; Maletti, Sina; Amstutz, Ursula; Hewer, Ekkehard; Genitsch, Vera; Fleischmann, Achim; Rushing, Elisabeth J; Grobholz, Rainer; Fischer, Ingeborg; Jochum, Wolfram; Cathomas, Gieri; Osunkoya, Adeboye O; Bubendorf, Lukas; Moch, Holger; Thalmann, George; Feng, Felix Y; Gillessen, Silke; ... (2023). DNA methylation landscapes of prostate cancer brain metastasis are shaped by early driver genetic alterations. Cancer research, 83(8), pp. 1203-1213. American Association for Cancer Research AACR 10.1158/0008-5472.CAN-22-2236
Kashani, Elham; Schnidrig, Désirée; Hashemi Gheinani, Ali; Ninck, Martina Selina; Zens, Philipp; Maragkou, Theoni; Baumgartner, Ulrich; Schucht, Philippe; Rätsch, Gunnar; Rubin, Mark A; Berezowska, Sabina; Ng, Charlotte K Y; Vassella, Erik (2023). Integrated longitudinal analysis of adult grade 4 diffuse gliomas with long-term relapse interval revealed upregulation of TGF-β signaling in recurrent tumors. Neuro-Oncology, 25(4), pp. 662-673. Oxford University Press 10.1093/neuonc/noac220
Gil-Jimenez, Alberto; van Dorp, Jeroen; Contreras-Sanz, Alberto; van der Vos, Kristan; Vis, Daniel J; Braaf, Linde; Broeks, Annegien; Kerkhoven, Ron; van Kessel, Kim E M; Ribal, María José; Alcaraz, Antonio; Wessels, Lodewyk F A; Seiler, Roland; Wright, Jonathan L; Mengual, Lourdes; Boormans, Joost; van Rhijn, Bas W G; Black, Peter C; van der Heijden, Michiel S (2023). Assessment of Predictive Genomic Biomarkers for Response to Cisplatin-based Neoadjuvant Chemotherapy in Bladder Cancer. European urology, 83(4), pp. 313-317. Elsevier 10.1016/j.eururo.2022.07.023
Varadi, Melinda; Nagy, Nikolett; Reis, Henning; Hadaschik, Boris; Niedworok, Christian; Modos, Orsolya; Szendroi, Attila; Ablat, Jason; Black, Peter C; Keresztes, David; Csizmarik, Anita; Olah, Csilla; Gaisa, Nadine T; Kiss, Andras; Timar, Jozsef; Toth, Erika; Csernak, Erzsebet; Gerstner, Arpad; Mittal, Vinay; Karkampouna, Sofia; ... (2023). Clinical sequencing identifies potential actionable alterations in a high rate of urachal and primary bladder adenocarcinomas. Cancer medicine, 12(7), pp. 9041-9054. Wiley 10.1002/cam4.5639
Wiesehöfer, Marc; Raczinski, Benedikt Bernhard Gereon; Wiesehöfer, Caroline; Dankert, Jaroslaw Thomas; Czyrnik, Elena Dilara; Spahn, Martin; Kruithof-de Julio, Marianna; Wennemuth, Gunther (2023). Epiregulin expression and secretion is increased in castration-resistant prostate cancer. Frontiers in oncology, 13(1107021), p. 1107021. Frontiers Research Foundation 10.3389/fonc.2023.1107021
Egger, Martin; Seiler, Roland (2023). Which Patients To Consider for Bladder Preservation After a Complete Response to Neoadjuvant Chemotherapy. European urology focus, 9(2), pp. 229-231. Elsevier 10.1016/j.euf.2023.01.023
Dominko, Kristina; Talajić, Antea; Radic, Martina; Vidaček, Nikolina Škrobot; Vlahoviček, Kristian; Bosnar, Maja Herak; Ćetković, Helena (2023). Transfection of Sponge Cells and Intracellular Localization of Cancer-Related MYC, RRAS2, and DRG1 Proteins. Marine drugs, 21(2) MDPI 10.3390/md21020119
Chua, Chee Wai; Kruithof-de Julio, Marianna (2023). Exploring prostate cancer in the post-genomic era. Cancer letters, 553, p. 215992. Elsevier 10.1016/j.canlet.2022.215992
von Siebenthal, Michelle; Akshay, Akshay; Besic, Mustafa; Schneider, Marc P; Hashemi Gheinani, Ali; Burkhard, Fiona C; Monastyrskaya, Katia (2023). Molecular Characterization of Non-Neurogenic and Neurogenic Lower Urinary Tract Dysfunction (LUTD) in SCI-Induced and Partial Bladder Outlet Obstruction Mouse Models. International journal of molecular sciences, 24(3) MDPI 10.3390/ijms24032451
Czyrnik, Elena D; Wiesehöfer, Marc; Dankert, Jaroslaw T; Wach, Sven; Wagner, Mathias; Spahn, Martin; Kruithof de Julio, Marianna; Wennemuth, Gunther (2023). Stromal-epithelial interaction induces GALNT14 in prostate carcinoma cells. Frontiers in oncology, 13(1212585), p. 1212585. Frontiers Research Foundation 10.3389/fonc.2023.1212585
Akshay, Akshay; Katoch, Mitali; Abedi, Masoud; Shekarchizadeh, Navid; Besic, Mustafa; Burkhard, Fiona C; Bigger-Allen, Alex; Adam, Rosalyn M; Monastyrskaya, Katia; Hashemi Gheinani, Ali (2022). SpheroScan: a user-friendly deep learning tool for spheroid image analysis. GigaScience, 12 Oxford University Press 10.1093/gigascience/giad082
Akshay, Akshay; Abedi, Masoud; Shekarchizadeh, Navid; Burkhard, Fiona C; Katoch, Mitali; Bigger-Allen, Alex; Adam, Rosalyn M; Monastyrskaya, Katia; Hashemi Gheinani, Ali (2022). MLcps: machine learning cumulative performance score for classification problems. GigaScience, 12 Oxford University Press 10.1093/gigascience/giad108
Leoncini, Pier Paolo; Vitullo, Patrizia; Reddel, Sofia; Tocco, Valeria; Paganelli, Valeria; Stocchi, Francesca; Mariggiò, Elena; Massa, Michele; Nigita, Giovanni; Veneziano, Dario; Fadda, Paolo; Scarpa, Mario; Pigazzi, Martina; Bertaina, Alice; Rota, Rossella; Pagliara, Daria; Merli, Pietro (2022). MicroRNA profiling of paediatric AML with FLT-ITD or MLL-rearrangements: Expression signatures and in vitro modulation of miR-221-3p and miR-222-3p with BRD4/HATs inhibitors. Oncology reports, 48(6) National Hellenic Research Foundation 10.3892/or.2022.8436
Marcq, Gautier; Afferi, Luca; Neuzillet, Yann; Nykopp, Timo; Voskuilen, Charlotte S; Furrer, Marc A; Kassouf, Wassim; Aziz, Atiqullah; Bajeot, Anne Sophie; Alvarez-Maestro, Mario; Black, Peter; Roupret, Morgan; Noon, Aidan P; Seiler, Roland; Hendricksen, Kees; Roumiguie, Mathieu; Pang, Karl H; Laine-Caroff, Paul; Xylinas, Evanguelos; Ploussard, Guillaume; ... (2022). Oncological Outcomes for Patients Harboring Positive Surgical Margins Following Radical Cystectomy for Muscle-Invasive Bladder Cancer: A Retrospective Multicentric Study on Behalf of the YAU Urothelial Group. Cancers, 14(23) MDPI AG 10.3390/cancers14235740
Özdemir, Berna C; Arnold, Nicolas; Fleischmann, Achim; Hensel, Janine; Klima, Irena; Kruithof-de Julio, Marianna; Burkhard, Fiona; Hayoz, Stefanie; Kiss, Bernhard; Thalmann, George N (2022). Prediction of Biochemical Recurrence Based on Molecular Detection of Lymph Node Metastasis After Radical Prostatectomy. European urology open science, 44, pp. 1-10. Elsevier 10.1016/j.euros.2022.07.005
Chua, Chee Wai; Kruithof-de Julio, Marianna (2022). Featuring the guest editors for the Special Issue on Prostate Cancer, Cancer Letters. Cancer letters, 544(215807), p. 215807. Elsevier 10.1016/j.canlet.2022.215807
Esposito, Roberta; Polidori, Taisia; Meise, Dominik F; Pulido-Quetglas, Carlos; Chouvardas, Panagiotis; Forster, Stefan; Schaerer, Paulina; Kobel, Andrea; Schlatter, Juliette; Kerkhof, Erik; Roemmele, Michaela; Rice, Emily S.; Zhu, Lina; Lanzós, Andrés; Guillen-Ramirez, Hugo A; Basile, Giulia; Carrozzo, Irene; Vancura, Adrienne; Ullrich, Sebastian; Andrades, Alvaro; ... (2022). Multi-hallmark long noncoding RNA maps reveal non-small cell lung cancer vulnerabilities. Cell genomics, 2(9), p. 100171. Elsevier 10.1016/j.xgen.2022.100171
Gao, Yanyun; Kruithof-de Julio, Marianna; Peng, Ren-Wang; Dorn, Patrick (2022). Organoids as a Model for Precision Medicine in Malignant Pleural Mesothelioma: Where Are We Today? Cancers, 14(15) MDPI AG 10.3390/cancers14153758
Laise, Pasquale; Stanifer, Megan L; Bosker, Gideon; Sun, Xiaoyun; Triana, Sergio; Doldan, Patricio; La Manna, Federico; De Menna, Marta; Realubit, Ronald B; Pampou, Sergey; Karan, Charles; Alexandrov, Theodore; Kruithof-de Julio, Marianna; Califano, Andrea; Boulant, Steeve; Alvarez, Mariano J (2022). A model for network-based identification and pharmacological targeting of aberrant, replication-permissive transcriptional programs induced by viral infection. Communications biology, 5(1), p. 714. Springer Nature 10.1038/s42003-022-03663-8
Bianco, Gaia; Coto-Llerena, Mairene; Gallon, John; Kancherla, Venkatesh; Taha-Mehlitz, Stephanie; Marinucci, Mattia; Konantz, Martina; Srivatsa, Sumana; Montazeri, Hesam; Panebianco, Federica; Tirunagaru, Vijaya G; De Menna, Marta; Paradiso, Viola; Ercan, Caner; Dahmani, Ahmed; Montaudon, Elodie; Beerenwinkel, Niko; Kruithof-de Julio, Marianna; Terracciano, Luigi M; Lengerke, Claudia; ... (2022). Author Correction: GATA3 and MDM2 are synthetic lethal in estrogen receptor-positive breast cancers. Communications biology, 5(1), p. 658. Springer Nature 10.1038/s42003-022-03612-5
Sengupta, Arunima; Roldan, Nuria; Kiener, Mirjam; Froment, Laurène; Raggi, Giulia; Imler, Theo; de Maddalena, Lea; Rapet, Aude; May, Tobias; Carius, Patrick; Schneider-Daum, Nicole; Lehr, Claus-Michael; Kruithof-de Julio, Marianna; Geiser, Thomas; Marti, Thomas; Stucki, Janick D.; Hobi, Nina; Guenat, Olivier T (2022). A New Immortalized Human Alveolar Epithelial Cell Model to Study Lung Injury and Toxicity on a Breathing Lung-On-Chip System. Frontiers in toxicology, 4(840606), pp. 1-18. Frontiers Media S.A. 10.3389/ftox.2022.840606
Lorenzoni, Marco; De Felice, Dario; Beccaceci, Giulia; Di Donato, Giorgia; Foletto, Veronica; Genovesi, Sacha; Bertossi, Arianna; Cambuli, Francesco; Lorenzin, Francesca; Savino, Aurora; Avalle, Lidia; Cimadamore, Alessia; Montironi, Rodolfo; Weber, Veronica; Carbone, Francesco Giuseppe; Barbareschi, Mattia; Demichelis, Francesca; Romanel, Alessandro; Poli, Valeria; Del Sal, Giannino; ... (2022). ETS-related gene (ERG) undermines genome stability in mouse prostate progenitors via Gsk3β dependent Nkx3.1 degradation. Cancer letters, 534, p. 215612. Elsevier 10.1016/j.canlet.2022.215612
Clement, Christoph; Birindelli, Gabriele; Pizzichemi, Marco; Pagano, Fiammetta; Kruithof-de Julio, Marianna; Ziegler, Sibylle; Rominger, Axel; Auffray, Etiennette; Shi, Kuangyu (2022). Concept development of an on-chip PET system. EJNMMI Physics, 9(1), p. 38. Springer 10.1186/s40658-022-00467-x
Ahmed, Mohamed E; Todenhöfer, Tilman; Karnes, R Jeffrey; Seiler, Roland (2022). Prognostic Role of RNA Expression Molecular Biomarkers in Prostate and Bladder Cancers. European urology focus, 8(3), pp. 663-666. Elsevier 10.1016/j.euf.2022.06.009
Bianco, Gaia; Coto-Llerena, Mairene; Gallon, John; Kancherla, Venkatesh; Taha-Mehlitz, Stephanie; Marinucci, Mattia; Konantz, Martina; Srivatsa, Sumana; Montazeri, Hesam; Panebianco, Federica; Tirunagaru, Vijaya G; De Menna, Marta; Paradiso, Viola; Ercan, Caner; Dahmani, Ahmed; Montaudon, Elodie; Beerenwinkel, Niko; Kruithof-de Julio, Marianna; Terracciano, Luigi M; Lengerke, Claudia; ... (2022). GATA3 and MDM2 are synthetic lethal in estrogen receptor-positive breast cancers. Communications biology, 5(1), p. 373. Springer Nature 10.1038/s42003-022-03296-x
Gunter, Jennifer H; Kruithof-de Julio, Marianna; Zoni, Eugenio (2022). Editorial: Personalized Medicine for Urological Cancers: Targeting Cancer Metabolism. Frontiers in oncology, 12, p. 862811. Frontiers Research Foundation 10.3389/fonc.2022.862811
Laise, Pasquale; Stanifer, Megan L; Bosker, Gideon; Sun, Xiaoyun; Triana, Sergio; Doldan, Patricio; La Manna, Federico; De Menna, Marta; Realubit, Ronald B; Pampou, Sergey; Karan, Charles; Alexandrov, Theodore; Kruithof-de Julio, Marianna; Califano, Andrea; Boulant, Steeve; Alvarez, Mariano J (4 February 2022). A Model for Network-Based Identification and Pharmacological Targeting of Aberrant, Replication-Permissive Transcriptional Programs Induced by Viral Infection. Research Square 10.21203/rs.3.rs-1287631/v1
Hirt, Christian K; Booij, Tijmen H; Grob, Linda; Simmler, Patrik; Toussaint, Nora C; Keller, David; Taube, Doreen; Ludwig, Vanessa; Goryachkin, Alexander; Pauli, Chantal; Lenggenhager, Daniela; Stekhoven, Daniel J; Stirnimann, Christian U; Endhardt, Katharina; Ringnalda, Femke; Villiger, Lukas; Siebenhüner, Alexander; Karkampouna, Sofia; De Menna, Marta; Beshay, Janette; ... (2022). Drug screening and genome editing in human pancreatic cancer organoids identifies drug-gene interactions and candidates for off-label treatment. Cell genomics, 2(2), p. 100095. Elsevier 10.1016/j.xgen.2022.100095
Kang, Juening; La Manna, Federico; Bonollo, Francesco; Sampson, Natalie; Alberts, Ian L; Mingels, Clemens; Afshar Oromieh, Ali; Thalmann, George N; Karkampouna, Sofia (2022). Tumor microenvironment mechanisms and bone metastatic disease progression of prostate cancer. Cancer letters, 530, pp. 156-169. Elsevier 10.1016/j.canlet.2022.01.015
Karkampouna, Sofia; Kruithof-de Julio, Marianna; Thalmann, George N (2022). Role of prostate and bone stromal cells on prostate cancer progression. American journal of clinical and experimental urology, 10(3), pp. 180-187. e-Century Publishing
von Siebenthal, Michelle; Schneider, Marc P.; Zheng, Shaokai; Wüthrich, Patrick Y.; Burkhard, Fiona C.; Monastyrskaya, Katia (2021). Effects of opioids and benzodiazepines on bladder function of awake restrained mice. American journal of clinical and experimental urology, 9(6), pp. 456-468. e-Century Publishing
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