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Rubin, Aurélie; Bailey, Christyn; Strepparava, Nicole; Wahli, Thomas; Segner, Helmut; Rubin, Jean-François (2022). Reliable Field Assessment of Proliferative Kidney Disease in Wild Brown Trout, Salmo trutta, Populations: When Is the Optimal Sampling Period? Pathogens, 11(6), p. 681. MDPI AG 10.3390/pathogens11060681
Bailey, Christyn John; Strepparava, Nicole; Ros, Albert Frank; Wahli, Thomas; Schmidt-Posthaus, Heike; Segner, Helmut; Tafalla, Carolina (2021). It's a hard knock life for some: Heterogeneity in infection life history of salmonids influences parasite disease outcomes. Journal of animal ecology, 90(11), pp. 2573-2593. Wiley 10.1111/1365-2656.13562
Origgi, Francesco C.; Otten, Patricia; Lohmann, Petra; Sattler, Ursula; Wahli, Thomas; Lavazza, Antonio; Gaschen, Véronique; Stoffel, Michael H. (2021). Herpesvirus-Associated Proliferative Skin Disease in Frogs and Toads: Proposed Pathogenesis. Veterinary pathology, 58(4), pp. 713-729. Sage 10.1177/03009858211006385
Tschirren, Linda; Bachmann, David; Güler, Ali Cem; Blaser, Oliver; Rhyner, Nicola; Seitz, Andreas; Zbinden, Erich; Wahli, Thomas; Segner, Helmut; Refardt, Dominik (2021). MyFishCheck: A Model to Assess Fish Welfare in Aquaculture. Animals, 11(1) MDPI 10.3390/ani11010145
Strepparava, Nicole; Ros, Albert; Hartikainen, Hanna; Schmidt-Posthaus, Heike; Wahli, Thomas; Segner, Helmut; Bailey, Christyn (2020). Effects of parasite concentrations on infection dynamics and proliferative kidney disease pathogenesis in brown trout ( Salmo trutta ). Transboundary and emerging diseases, 67(6), pp. 2642-2652. Wiley 10.1111/tbed.13615
Bailey, Christyn; Segner, Helmut; Wahli, Thomas; Tafalla, Carolina (2020). Back From the Brink: Alterations in B and T Cell Responses Modulate Recovery of Rainbow Trout From Chronic Immunopathological Tetracapsuloides bryosalmonae Infection. Frontiers in immunology, 11(1093) Frontiers Research Foundation 10.3389/fimmu.2020.01093
Bernet, Daniel; Wahli, Thomas; Küng, Christoph; Segner, Helmut (2020). Zooplankton Feeding Induces Macroscopical Gonad Malformations in Whitefish (Coregonus ssp.) from Lake Thun, Switzerland. Fishes, 5(3), p. 26. MDPI 10.3390/fishes5030026
Bailey, Christyn; Strepparava, Nicole; Wahli, Thomas; Segner, Helmut (2019). Exploring the immune response, tolerance and resistance in proliferative kidney disease of salmonids. Developmental and Comparative Immunology, 90, pp. 165-175. Elsevier 10.1016/j.dci.2018.09.015
Rubin, Aurélie; de Coulon, Pauline; Bailey, Christyn; Segner, Helmut; Wahli, Thomas; Rubin, Jean-François (2019). Keeping an Eye on Wild Brown Trout (Salmo trutta) Populations: Correlation Between Temperature, Environmental Parameters, and Proliferative Kidney Disease. Frontiers in veterinary science, 6, p. 281. Frontiers Media 10.3389/fvets.2019.00281
Bailey, Christyn John; Rubin, Aurélie; Strepparava, Nicole; Segner, Helmut; Rubin, Jean-François; Wahli, Thomas (2018). Do fish get wasted? Assessing the influence of effluents on parasitic infection of wild fish. PeerJ, 6, e5956. PeerJ, Ltd 10.7717/peerj.5956
Ravasi, Damiana; De Respinis, Sophie; Wahli, Thomas (2018). Multilocus sequence typing reveals clonality in Saprolegnia parasitica outbreaks. Journal of fish diseases, 41(11), pp. 1653-1665. Blackwell 10.1111/jfd.12869
Origgi, Francesco; Schmidt, Benedikt R; Lohmann, Petra; Otten, Patricia; Meier, Roman Kaspar; Pisano, Simone; Moore-Jones, Gaia Alessandra; Tecilla, Marco; Sattler, Ursula; Wahli, Thomas; Gaschen, Véronique; Stoffel, Michael Hubert (2018). Bufonid herpesvirus 1 (BfHV1) associated dermatitis and mortality in free ranging common toads (Bufo bufo) in Switzerland. Scientific Reports, 8(1), p. 14737. Nature Publishing Group 10.1038/s41598-018-32841-0
Strepparava, Nicole; Segner, Helmut; Ros, Albert; Hartikainen, Hanna; Schmidt-Posthaus, Heike; Wahli, Thomas (2018). Temperature-related parasite infection dynamics: the case of proliferative kidney disease of brown trout. Parasitology, 145(3), pp. 281-291. Cambridge University Press 10.1017/S0031182017001482
Duchaud, Eric; Rochat, Tatiana; Habib, Christophe; Barbier, Paul; Loux, Valentin; Guérin, Cyprien; Dalsgaard, Inger; Madsen, Lone; Nilsen, Hanne; Sundell, Krister; Wiklund, Tom; Strepparava, Nicole; Wahli, Thomas; Caburlotto, Greta; Manfrin, Amedeo; Wiens, Gregory D; Fujiwara-Nagata, Erina; Avendaño-Herrera, Ruben; Bernardet, Jean-François and Nicolas, Pierre (2018). Genomic Diversity and Evolution of the Fish Pathogen Flavobacterium psychrophilum. Frontiers in Microbiology, 9, p. 138. Frontiers 10.3389/fmicb.2018.00138
Bailey, Christyn John; Schmidt-Posthaus, Heike; Segner, Helmut; Wahli, Thomas; Strepparava, Nicole (2018). Are brown trout Salmo trutta fario and rainbow trout Oncorhynchus mykiss two of a kind? A comparative study of salmonids to temperature-influenced Tetracapsuloides bryosalmonae infection. Journal of fish diseases, 41(2), pp. 191-198. Wiley-Blackwell 10.1111/jfd.12694
Wahli, Thomas; Madsen, Lone (2018). Flavobacteria, a Never Ending Threat for Fish: a Review. Current Clinical Microbiology Reports, 5(1), pp. 26-37. Springer 10.1007/s40588-018-0086-x
Carraro, Luca; Bertuzzo, Enrico; Mari, Lorenzo; Fontes, Inês; Hartikainen, Hanna; Strepparava, Nicole; Schmidt-Posthaus, Heike; Wahli, Thomas; Jokela, Jukka; Gatto, Marino; Rinaldo, Andrea (2017). Integrated field, laboratory, and theoretical study of PKD spread in a Swiss prealpine river. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 114(45), pp. 11992-11997. National Academy of Sciences NAS 10.1073/pnas.1713691114
Diserens, Nicolas Frédéric; Falzon, Laura Cristina; von Siebenthal, Beat; Schüpbach, Gertraud; Wahli, Thomas (2017). Validation of a model for ranking aquaculture facilities for risk-based disease surveillance. Preventive veterinary medicine, 145, pp. 32-40. Elsevier 10.1016/j.prevetmed.2017.06.010
Bailey, Christyn John; Segner, Helmut; Casanova, Ayako; Wahli, Thomas (2017). Who needs the hotspot? The effect of temperature on the fish host immune response to Tetracapsuloides bryosalmonae the causative agent of proliferative kidney disease. Fish & shellfish immunology, 63, pp. 424-437. Elsevier Science 10.1016/j.fsi.2017.02.039
Origgi, Francesco; Benedicenti, Ottavia; Segner, Helmut; Sattler, Ursula; Wahli, Thomas; Frey, Joachim (2017). Aeromonas salmonicida type III secretion system-effectors-mediated immune suppression in rainbow trout (Oncorhynchus mykiss). Fish & shellfish immunology, 60, pp. 334-345. Elsevier Science 10.1016/j.fsi.2016.12.006
Origgi, Francesco; Schmidt, B. R.; Lohmann, P.; Otten, P.; Akdesir, Ezgi; Gaschen, Véronique; Aguilar Bultet, Lisandra; Wahli, Thomas; Sattler, Ursula; Stoffel, Michael Hubert (2017). Ranid Herpesvirus 3 and Proliferative Dermatitis in Free-Ranging Wild Common Frogs (Rana Temporaria). Veterinary pathology, 54(4), pp. 686-694. American College of Veterinary Pathologists 10.1177/0300985817705176
Cieslak, Michael; Wahli, Thomas; Diserens, Nicolas Frédéric; Haenen, Olga L M; Schütze, Heike (2017). Phylogeny of the infectious hematopoietic necrosis virus in European aquaculture. PLoS ONE, 12(9), e0184490. Public Library of Science 10.1371/journal.pone.0184490
Carraro, Luca; Mari, Lorenzo; Hartikainen, Hanna; Strepparava, Nicole; Wahli, Thomas; Jokela, Jukka; Gatto, Marino; Rinaldo, Andrea; Bertuzzo, Enrico (2016). An epidemiological model for proliferative kidney disease in salmonid populations. Parasites & Vectors, 9(1), p. 487. BioMed Central 10.1186/s13071-016-1759-z
Steinbach, Christoph; Kroupová, Hana Kocour; Wahli, Thomas; Klicnarová, Jana; Schmidt-Posthaus, Heike (2016). Histopathological alterations of the heart in fish: proposal for a standardized assessment. Diseases of aquatic organisms, 118(3), pp. 185-194. Inter-Research 10.3354/dao02971
Guevara Soto, Maricruz; Vaughan, Lloyd; Segner, Helmut; Wahli, Thomas; Vidondo Curras, Beatriz; Schmidt-Posthaus, Heike (2016). Epitheliocystis Distribution and Characterization in Brown Trout (Salmo trutta) from the Headwaters of Two Major European Rivers, the Rhine and Rhone. Frontiers in physiology, 7(131), p. 131. Frontiers Research Foundation 10.3389/fphys.2016.00131
Cieslak, Michael; Mikkelsen, Susie S; Skall, Helle F; Baud, Marine; Diserens, Nicolas Frédéric; Engelsma, Marc Y; Haenen, Olga L M; Mousakhani, Shirin; Panzarin, Valentina; Wahli, Thomas; Olesen, Niels J; Schütze, Heike (2016). Phylogeny of the Viral Hemorrhagic Septicemia Virus in European Aquaculture. PLoS ONE, 11(10), e0164475. Public Library of Science 10.1371/journal.pone.0164475
Jensen, Linda B; Wahli, Thomas; McGurk, Charles; Eriksen, Tommy Berger; Obach, Alex; Waagbø, Rune; Handler, Ana; Tafalla, Carolina (2015). Effect of temperature and diet on wound healing in Atlantic salmon (Salmo salar L.). Fish Physiology and Biochemistry, 41(6), pp. 1527-1543. Springer 10.1007/s10695-015-0105-2
Andrews, M; Stormoen, M; Schmidt-Posthaus, Heike; Wahli, Thomas; Midtlyng, P J (2015). Rapid temperature-dependent wound closure following adipose fin clipping of Atlantic salmon Salmo salar L. Journal of fish diseases, 38(6), pp. 523-531. Blackwell 10.1111/jfd.12261
Ott Knüsel, Fabienne; Doherr, MG; Knüsel, Ralph; Wahli, Thomas; Schmidt-Posthaus, Heike (2015). Risk factors for development of internal neoplasms in koi carp (Cyprinus carpio koi). Diseases of aquatic organisms, 114(3), pp. 199-207. Inter-Research 10.3354/dao02860
Wahli, Thomas; Bellec, L; von Siebenthal, Beat; Cabon, J; Schmidt-Posthaus, Heike; Morin, T (2015). First isolation of a rhabdovirus from perch Perca fluviatilis in Switzerland. Diseases of aquatic organisms, 116(2), pp. 93-101. Inter-Research 10.3354/dao02908
Strepparava, Nicole; Wahli, Thomas; Segner, Helmut; Petrini, Orlando (2014). Detection and quantification of Flavobacterium psychrophilum in water and fish tissue samples by quantitative real time PCR. BMC microbiology, 14, p. 105. BioMed Central 10.1186/1471-2180-14-105
Verlhac-Trichet, Viviane; Vielma, Jouni; Dias, Jorge; Rema, Paulo; Santigosa, Ester; Wahli, Thomas; Vogel, Kurt (2014). The Efficacy of a Novel Microbial 6-Phytase Expressed in Aspergillus oryzae on the Performance and Phosphorus Utilization of Cold- and Warm-Water Fish: Rainbow Trout, Oncorhynchus mykiss , and Nile Tilapia, Oreochromis niloticus. Journal of the World Aquaculture Society, 45(4), pp. 367-379. Wiley 10.1111/jwas.12133
Diserens, Nicolas; Presi, Patrick; Bernet, D; Schüpbach-Regula, Gertraud; Wahli, Thomas (2013). Risk assessment for the design of a risk-based surveillance programme for fish farms in Switzerland (in accordance with Council Directive 2006/88/EC of the European Union). Revue scientifique et technique, 32(3), pp. 751-763. International Office of Epizootics 10.20506/rst.32.2.2219
Bergh, Philippe Vanden; Burr, Sarah E; Benedicenti, Ottavia; von Siebenthal, Beat; Frey, Joachim; Wahli, Thomas (2013). Antigens of the type-three secretion system of Aeromonas salmonicida subsp. salmonicida prevent protective immunity in rainbow trout. Vaccine, 31(45), pp. 5256-5261. Elsevier 10.1016/j.vaccine.2013.08.057
Strepparava, Nicole; Nicolas, Pierre; Wahli, Thomas; Segner, Helmut; Petrini, Orlando (2013). Molecular epidemiology of Flavobacterium psychrophilum from Swiss fish farms. Diseases of aquatic organisms, 105(3), pp. 203-210. Inter-Research 10.3354/dao02609
Burki, Richard; Krasnov, Aleksei; Bettge, Kathrin; Rexroad, Caird E.; Afanasyev, Sergey; Antikainen, Miia; Burkhardt-Holm, Patricia; Wahli, Thomas; Segner, Helmut (2013). Molecular crosstalk between a chemical and a biological stressor and consequences on disease manifestation in rainbow trout. Aquatic toxicology, 127, pp. 2-8. Elsevier 10.1016/j.aquatox.2012.02.026
Gallana, Milena; Ryser-Degiorgis, Marie-Pierre; Wahli, Thomas; Segner, Helmut (2013). Climate change and infectious diseases of wildlife: Altered interactions between pathogens, vectors and hosts. Current zoology, 59(3), pp. 427-437. Chinese Academy of sciences
Schmidt-Posthaus, Heike; Bettge, K; Forster, U; Segner, Helmut; Wahli, Thomas (2012). Kidney pathology and parasite intensity in rainbow trout Oncorhynchus mykiss surviving proliferative kidney disease: time course and influence of temperature. Diseases of aquatic organisms, 97(3), pp. 207-218. Inter-Research 10.3354/dao02417
Burki, Richard; Krasnov, A.; Bettge, Kathrin; Rexroad, C. E.; Afanasyev, S.; Antikainen, M.; Burkhardt-Holm, P.; Wahli, Thomas; Segner, Helmut (2012). Pathogenic infection confounds induction of the estrogenic biomarker vitellogenin in rainbow trout. Environmental toxicology and chemistry, 31(10), pp. 2318-23. SETAC Press 10.1002/etc.1966
Strepparava, N.; Wahli, Thomas; Segner, Helmut; Polli, B.; Petrini, O. (2012). Fluorescent In Situ hybridization: a new tool for the direct identification and detection of F. psychrophilum. PLoS ONE, 7(11), e49280. Public Library of Science 10.1371/journal.pone.0049280
Okamura, Beth; Hartikainen, Hanna; Schmidt-Posthaus, Heike; Wahli, Thomas (2011). Life cycle complexity, environmental change and the emerging status of salmonid proliferative kidney disease. Freshwater biology, 56(4), pp. 735-753. Oxford: Blackwell Scientific Publications 10.1111/j.1365-2427.2010.02465.x
Wahli, Thomas; Bergmann, S.M. (2011). Viral haemorrhagic septicaemia (VHS): detection, distribution and combat. CAB Reviews, 6(2), pp. 1-10. Wallingford: CAB International
Bittner, D; Bernet, D; Wahli, Thomas; Segner, Helmut; Kueng, C; Largiadèr, Carlo R. (2009). How normal is abnormal? - Discriminating between deformations and natural variation in gonad morphology of European whitefish Coregonus lavaretus. Journal of fish biology, 74(7), pp. 1594-1614. Oxford: Blackwell 10.1111/j.1095-8649.2009.02233.x
Bettge, K.; Segner, Helmut; Burki, R.; Schmidt-Posthaus, Heike; Wahli, Thomas (2009). Proliferative kidney disease (PKD) of rainbow trout: temperature- and time-related changes of Tetracapsuloides bryosalmonae DNA in the kidney. Parasitology, 136(6), pp. 615-25. London: Cambridge University Press 10.1017/S0031182009005800
Bettge, K.; Wahli, Thomas; Segner, Helmut; Schmidt-Posthaus, Heike (2009). Proliferative kidney disease in rainbow trout: time- and temperature-related renal pathology and parasite distribution. Diseases of aquatic organisms, 83(1), pp. 67-76. Oldendorf (Luhe) (D): Inter-Research 10.3354/dao01989
Kipfer, S.; Segner, Helmut; Wenger, M.; Wahli, Thomas; Bernet, Daniel (2009). Long-term estrogen exposure of whitefish Coregonus lavaretus induces intersex but not Lake Thun-typical gonad malformations. Diseases of aquatic organisms, 84(1), pp. 43-56. Oldendorf (Luhe) (D): Inter-Research 10.3354/dao02031
Rossteuscher, Stefanie; Wenker, C.; Jermann, T.; Wahli, Thomas; Oldenberg, Elisabeth; Schmidt-Posthaus, Heike (2008). Severe Scuticociliate (Philasterides dicentrarchi) Infection in a Population of Sea Dragons (Phycodurus eques and Phyllopteryx taeniolatus). Veterinary pathology, 45(4), pp. 546-550. American College of Veterinary Pathologists 10.1354/vp.45-4-546
Knüsel, R; Bergmann, S M; Einer-Jensen, K; Casey, J; Segner, H; Wahli, Thomas (2007). Virus isolation vs RT-PCR: which method is more successful in detecting VHSV and IHNV in fish tissue sampled under field conditions? Journal of fish diseases, 30(9), pp. 559-68. Oxford: Blackwell 10.1111/j.1365-2761.2007.00842.x
Urbach, D; Bittner, D; Lenz, TL; Bernet, Daniel; Wahli, Thomas; Wedekind, C (2007). Sperm velocity in an Alpine whitefish: effects of age, size, condition, fluctuating asymmetry and gonad abnormalities. Journal of fish biology, 71(3), pp. 672-683. Oxford: Blackwell 10.1111/j.1095-8649.2007.01537.x
Wahli, Thomas; Bernet, Daniel; Steiner, PA; Schmidt-Posthaus, Heike (2007). Geographic distribution of Tetracapsuloides bryosalmonae infected fish in Swiss rivers: an update. Aquatic Sciences, 69(1), pp. 3-10. Basel: Birkhäuser-Verlag; www.birkhäuser.ch 10.1007/s00027-006-0843-4
Zimmerli, Simone; Bernet, Daniel; Burckhardt-Holm, P; Schmidt-Posthaus, Heike; Volanthen, P; Wahli, Thomas; Segner, Helmut (2007). Assessment of fish health status in four Swiss rivers showing a decline of brown trouth catches. Aquatic Sciences, 69(1), pp. 11-25. Basel: Birkhäuser-Verlag; www.birkhäuser.ch 10.1007/s00027-006-0844-3
Schmidt-Posthaus, Heike; Pugovkin, Dimtri; Wahli, Thomas (2005). Iridophoroma in a European grayling (Thymallus thymallus) in Switzerland. Bulletin of the European Association of Fish Pathologists, 25(1), pp. 36-39. European Association of Fish Patologists
Bernet, Daniel; Schmidt-Posthaus, Heike; Wahli, Thomas; Burkhardt-Holm, Patricia (2004). Evaluation of two monitoring approaches to assess effects of waste water disposal on histological alterations in fish. Hydrobiologia, 524(1), pp. 53-66. Springer 10.1023/B:HYDR.0000036196.84682.27
Braun, Martin; Stuber, Katja; Schlatter, Yvonne; Wahli, Thomas; Kuhnert, Peter; Frey, Joachim (2002). Characterization of an ADP-ribosyltransferase toxin (AexT) from Aeromonas salmonicida subsp. salmonicida. Journal of bacteriology, 184(7), pp. 1851-1858. Washington, D.C.: American Society for Microbiology 10.1128/JB.184.7.1851-1858.2002
Schmidt-Posthaus, Heike; Wahli, Thomas; Bernet, Daniel; Bernet, Daniel; Segner, Helmut; Knüsel, Ralph; Escher, Matthias; Pugovkin, Dimtri; Burkhardt-Holm, Patricia (2002). Proliferative kidney disease (PKD) in Switzerland: Current state of knowledge. Journal of fish diseases, 25(8), pp. 491-500. Blackwell 10.1046/j.1365-2761.2002.00401.x
Wahli, Thomas (April 2014). Saprolegnia: Ein alter Bekannter als neue Gefahr? aqua viva. Die Zeitschrift für Gewässerschutz, 56(4) Aqua viva Rheinaubund
Frey, Joachim; Burr, Sarah Ellen; Wahli, Thomas (2016). Design of an Immersion Vaccine Against Aeromonad Septicemia in Perch (Perca fluviatilis L.). In: Thomas, Sunil (ed.) Vaccine Design. Methods in molecular biology: Vol. 1404 (pp. 203-209). Springer 10.1007/978-1-4939-3389-1_14
Schmidt-Posthaus, Heike; Wahli, Thomas (2015). Host and Environmental Influences on Development of Disease. In: Okamura, Beth; Gruhl, Alexander; Bartholomew, Jerri L. (eds.) Myxozoan Evolution, Ecology and Development (pp. 281-293). Cham: Springer 10.1007/978-3-319-14753-6_15
Sitjà Bobadilla, Ariadna; Schmidt-Posthaus, Heike; Wahli, Thomas; Holland, Jason W.; Secombes, Chris J. (2015). Fish Immune Responses to Myxozoa. In: Okamura, Beth; Gruhl, Alexander; Bartholomew, Jerri L. (eds.) Myxozoan Evolution, Ecology and Development (pp. 253-280). Cham: Springer 10.1007/978-3-319-14753-6_14
Keeling, Caroline Marie (2018). Video-based identification of surrogate endpoints in experimental bacterial infections of rainbow trout (Oncorhynchus mykiss). (Dissertation, University of Bern, Vetsuisse Faculty, Departement for Infectious Diseases and Pathobiology, Centre for Fish- and Wildlife Health)
