![]() | Up a level |
Greenberg, Lauren; Ryom, Lene; Neesgaard, Bastian; Wandeler, Gilles; Staub, Therese; Gisinger, Martin; Skoll, Michael; Günthard, Huldrych F; Scherrer, Alexandra; Mussini, Cristina; Smith, Colette; Johnson, Margaret; De Wit, Stéphane; Necsoi, Coca; Pradier, Christian; Wit, Ferdinand; Lehmann, Clara; d’Arminio Monforte, Antonella; Miró, Jose M; Castagna, Antonella; ... (2020). Clinical outcomes of two-drug regimens vs. three-drug regimens in antiretroviral treatment-experienced people living with HIV (In Press). Clinical infectious diseases Oxford University Press 10.1093/cid/ciaa1878
Trevillyan, Janine M; Dart, Anthony; Paul, Eldho; Cavassini, Matthias; Fehr, Jan; Staehelin, Cornelia; Dewar, Elizabeth M; Hoy, Jennifer F; Calmy, Alexandra (2020). Impact of rosuvastatin on atherosclerosis in people with HIV at moderate cardiovascular risk; a randomised, controlled trial. (In Press). AIDS Lippincott Williams & Wilkins 10.1097/QAD.0000000000002764
Wan, Chenjie; Bachmann, Nadine; Mitov, Venelin; Blanquart, François; Céspedes, Susana Posada; Turk, Teja; Neumann, Kathrin; Beerenwinkel, Niko; Bogojeska, Jasmina; Fellay, Jacques; Roth, Volker; Böni, Jürg; Perreau, Matthieu; Klimkait, Thomas; Yerly, Sabine; Battegay, Manuel; Walti, Laura; Calmy, Alexandra; Vernazza, Pietro; Bernasconi, Enos; ... (2020). Heritability of the HIV-1 reservoir size and decay under long-term suppressive ART. Nature communications, 11(1), p. 5542. Nature Publishing Group 10.1038/s41467-020-19198-7
Sculier, Delphine; Wandeler, Gilles; Yerly, Sabine; Marinosci, Annalisa; Stoeckle, Marcel; Bernasconi, Enos; Braun, Dominique L; Vernazza, Pietro; Cavassini, Matthias; Buzzi, Marta; Metzner, Karin J; Decosterd, Laurent A; Günthard, Huldrych F; Schmid, Patrick; Limacher, Andreas; Egger, Matthias; Calmy, Alexandra (2020). Efficacy and safety of dolutegravir plus emtricitabine versus standard ART for the maintenance of HIV-1 suppression: 48-week results of the factorial, randomized, non-inferiority SIMPL'HIV trial. PLoS medicine, 17(11), e1003421. Public Library of Science 10.1371/journal.pmed.1003421
Pyngottu, Ashima; Scherrer, Alexandra U; Kouyos, Roger; Huber, Michael; Hirsch, Hans; Perreau, Matthieu; Yerly, Sabine; Calmy, Alexandra; Cavassini, Matthias; Stöckle, Marcel; Furrer, Hansjakob; Vernazza, Pietro; Bernasconi, Enos; Günthard, Huldrych F (2020). Predictors of virological failure and time to viral suppression of first line integrase inhibitor based antiretroviral treatment. (In Press). Clinical infectious diseases Oxford University Press 10.1093/cid/ciaa1614
Engel, Tanja; Raffenberg, Marieke; Schoepf, Isabella C; Kootstra, Neeltje A; Reiss, Peter; Thorball, Christian W; Hasse, Barbara; Hirzel, Cédric; Wissel, Kerstin; Roth, Jan A; Bernasconi, Enos; Darling, Katharine E A; Calmy, Alexandra; Fellay, Jacques; Kouyos, Roger D; Günthard, Huldrych F; Ledergerber, Bruno; Tarr, Philip E (2020). Telomere Length, Traditional Risk Factors, HIV-related Factors and Coronary Artery Disease Events in Swiss Persons Living with HIV. (In Press). Clinical infectious diseases Oxford University Press 10.1093/cid/ciaa1034
Surial, Bernard; Ledergerber, Bruno; Calmy, Alexandra; Cavassini, Matthias; Günthard, Huldrych F; Kovari, Helen; Stöckle, Marcel; Bernasconi, Enos; Schmid, Patrick; Fux, Christoph A; Furrer, Hansjakob; Rauch, Andri; Wandeler, Gilles (2020). Changes in renal function after switching from TDF to TAF in HIV-infected individuals: a prospective cohort study. Journal of infectious diseases, 222(4), pp. 637-645. Oxford University Press 10.1093/infdis/jiaa125
Roth, Jan A; Radevski, Gorjan; Marzolini, Catia; Rauch, Andri; Günthard, Huldrych F; Kouyos, Roger D; Fux, Christoph A; Scherrer, Alexandra U; Calmy, Alexandra; Cavassini, Matthias; Kahlert, Christian R; Bernasconi, Enos; Bogojeska, Jasmina; Battegay, Manuel (2020). Cohort-derived machine learning models for individual prediction of chronic kidney disease in people living with HIV: a prospective multicentre cohort study. (In Press). The journal of infectious diseases Oxford University Press 10.1093/infdis/jiaa236
Glass, Tracy R; Günthard, Huldrych; Calmy, Alexandra; Bernasconi, Enos; Scherrer, Alexandra U; Battegay, Manuel; Steffen, Ana; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Cavassini, Matthias; Furrer, Hansjakob (2020). The role of HIV asymptomatic status when starting ART on adherence and treatment outcomes and implications for test and treat: the Swiss HIV Cohort Study. (In Press). Clinical infectious diseases Oxford University Press 10.1093/cid/ciaa239
Greenberg, Lauren; Ryom, Lene; Wandeler, Gilles; Grabmeier-Pfistershammer, Katharina; Öllinger, Angela; Neesgaard, Bastian; Stephan, Christoph; Calmy, Alexandra; Rauch, Andri; Castagna, Antonella; Spagnuolo, Vincenzo; Johnson, Margaret; Stingone, Christof; Mussini, Cristina; De Wit, Stéphane; Necsoi, Coca; Campins, Antoni A; Pradier, Christian; Stecher, Melanie; Wasmuth, Jan-Christian; ... (2020). Uptake and discontinuation of integrase inhibitors (INSTIs) in a large cohort setting. Journal of acquired immune deficiency syndromes JAIDS, 83(3), pp. 240-250. Wolters Kluwer Health 10.1097/QAI.0000000000002250
Barceló, Catalina; Guidi, Monia; Thorball, Christian W; Hammer, Christian; Chaouch, Aziz; Scherrer, Alexandra U; Hasse, Barbara; Cavassini, Matthias; Furrer, Hansjakob; Calmy, Alexandra; Haubitz, Sebastian; Bernasconi, Enos; Buclin, Thierry; Fellay, Jacques; Tarr, Philip E; Csajka, Chantal (2020). Impact of Genetic and Nongenetic Factors on Body Mass Index and Waist-Hip Ratio Change in HIV-Infected Individuals Initiating Antiretroviral Therapy. Open Forum Infectious Diseases, 7(1), ofz464. Oxford University Press 10.1093/ofid/ofz464
Abela, Irene A; Scherrer, Alexandra U; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Perreau, Matthieu; Hirsch, Hans H; Furrer, Hansjakob; Calmy, Alexandra; Schmid, Patrick; Cavassini, Matthias; Bernasconi, Enos; Günthard, Huldrych F (2020). Emergence of drug resistance in the Swiss HIV Cohort Study under potent antiretroviral therapy is observed in socially disadvantaged patients. Clinical infectious diseases, 70(2), pp. 297-303. Oxford University Press 10.1093/cid/ciz178
Sculier, Delphine; Wandeler, Gilles; Yerly, Sabine; Marinosci, Annalisa; Stoeckle, Marcel; Bernasconi, Enos; Braun, Dominique L; Vernazza, Pietro; Cavassini, Matthias; Buzzi, Marta; Metzner, Karin J; Decosterd, Laurent; Günthard, Huldrych F; Schmid, Patrick; Limacher, Andreas; Egger, Matthias; Calmy, Alexandra; Swiss HIV, Cohort Study (2020). Efficacy and safety of dolutegravir plus emtricitabine versus standard ART for the maintenance of HIV-1 suppression: 48-week results of the factorial, randomized, non-inferiority SIMPL-HIV trial: DATASET [Dataset]. University of Bern
Kusejko, Katharina; Marzel, Alex; Nguyen, Huyen; Chaudron, Sandra E; Bachmann, Nadine; Weber, Rainer; Bruggmann, Philip; Roth, Jan A; Bernasconi, Enos; Calmy, Alexandra; Cavassini, Matthias; Bregenzer, Andrea; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Perreau, Matthieu; Walti, Laura N.; Günthard, Huldrych F; Kouyos, Roger D (2020). Differences in social and mental well-being of long-term survivors among people who inject drugs and other participants in the Swiss HIV Cohort Study: 1980-2018. Antiviral therapy, 25(1), pp. 43-54. International Medical Press 10.3851/IMP3347
Olearo, Flaminia; Nguyen, Huyen; Bonnet, Fabrice; Yerly, Sabine; Wandeler, Gilles; Stoeckle, Marcel; Cavassini, Matthias; Scherrer, Alexandra; Costagliola, Dominique; Schmid, Patrick; Günthard, Huldrych F; Bernasconi, Enos; Boeni, Jürg; D'arminio Monforte, Antonella; Zazzi, Maurizio; Rossetti, Barbara; Neau, Didier; Bellecave, Pantxika; Rijnders, Bart; Reiss, Peter; ... (2019). Corrigendum to: Impact of the M184V/I Mutation on the Efficacy of Abacavir/Lamivudine/Dolutegravir Therapy in HIV Treatment-Experienced Patients. Open Forum Infectious Diseases, 6(12), ofz500. Oxford University Press 10.1093/ofid/ofz500
Surial, Bernard; Cavassini, Matthias; Calmy, Alexandra; Fehr, Jan; Stöckle, Marcel; Bernasconi, Enos; Roth, Bianca; Fux, Christoph A; Kovari, Helen; Furrer, Hansjakob; Rauch, Andri; Wandeler, Gilles (2019). Rates and predictors of switching to tenofovir alafenamide-containing ART in a nationwide cohort. BMC infectious diseases, 19(1), p. 834. BioMed Central 10.1186/s12879-019-4454-9
Olearo, Flaminia; Nguyen, Huyen; Bonnet, Fabrice; Yerly, Sabine; Wandeler, Gilles; Stoeckle, Marcel; Cavassini, Matthias; Scherrer, Alexandra; Costagiola, Dominique; Schmid, Patrick; Günthard, Huldrych F; Bernasconi, Enos; Boeni, Jürg; D'arminio Monforte, Antonella; Zazzi, Maurizio; Rossetti, Barbara; Neau, Didier; Bellecave, Pantxika; Rijnders, Bart; Reiss, Peter; ... (2019). Impact of the M184V/I Mutation on the Efficacy of Abacavir/Lamivudine/Dolutegravir Therapy in HIV Treatment-Experienced Patients. Open Forum Infectious Diseases, 6(10), ofz330. Oxford University Press 10.1093/ofid/ofz330
Ruffieux, Yann; Lemsalu, Liis; Aebi-Popp, Karoline; Calmy, Alexandra; Cavassini, Matthias; Fux, Christoph A; Günthard, Huldrych F; Marzolini, Catia; Scherrer, Alexandra; Vernazza, Pietro; Keiser, Olivia; Egger, Matthias (2019). Mortality from suicide among people living with HIV and the general Swiss population: 1988-2017. Journal of the International AIDS Society, 22(8), e25339. BioMed Central 10.1002/jia2.25339
Santos, Galia M A; Locatelli, Isabella; Métral, Mélanie; Calmy, Alexandra; Lecompte, Thanh Doco; Nadin, Isaure; Hauser, Christoph Victor; Cusini, Alexia; Hasse, Barbara; Kovari, Helen; Tarr, Philip; Stoeckle, Marcel; Fux, Christoph; Di Benedetto, Caroline; Schmid, Patrick; Darling, Katharine E A; Du Pasquier, Renaud; Cavassini, Matthias (2019). Cross-Sectional and Cumulative Longitudinal Central Nervous System Penetration Effectiveness Scores Are Not Associated With Neurocognitive Impairment in a Well Treated Aging Human Immunodeficiency Virus-Positive Population in Switzerland. Open Forum Infectious Diseases, 6(7), ofz277. Oxford University Press 10.1093/ofid/ofz277
Kusejko, Katharina; Bachmann, Nadine; Chaudron, Sandra E; Nguyen, Huyen; Braun, Dominique L; Hampel, Benjamin; Battegay, Manuel; Bernasconi, Enos; Calmy, Alexandra; Cavassini, Matthias; Hoffmann, Matthias; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Perreau, Matthieu; Rauch, Andri; Günthard, Huldrych F; Kouyos, Roger D (2019). A systematic phylogenetic approach to study the interaction of HIV-1 with coinfections, non-communicable and opportunistic diseases. The journal of infectious diseases, 220(2), pp. 244-253. Oxford University Press 10.1093/infdis/jiz093
Carlisle, Louisa A; Turk, Teja; Kusejko, Katharina; Metzner, Karin J; Leemann, Christine; Schenkel, Corinne; Bachmann, Nadine; Posada, Susana; Beerenwinkel, Niko; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Perreau, Matthieu; Braun, Dominique L; Rauch, Andri; Calmy, Alexandra; Cavassini, Matthias; Battegay, Manuel; Vernazza, Pietro; Bernasconi, Enos; ... (2019). Viral diversity from next-generation sequencing of HIV-1 samples provides precise estimates of infection recency and time since infection. The journal of infectious diseases, 220(2), pp. 254-265. Oxford University Press 10.1093/infdis/jiz094
Wandeler, Gilles; Buzzi, Marta; Anderegg, Nanina; Sculier, Delphine; Béguelin, Charles; Egger, Matthias; Calmy, Alexandra (2019). Virologic failure and HIV drug resistance on simplified, dolutegravir-based maintenance therapy: Systematic review and meta-analysis [version 2; peer review: 3 approved]. F1000Research, 7(1359), p. 1359. F1000 Research Ltd 10.12688/f1000research.15995.2
Leon-Reyes, Selene; Schäfer, Juliane; Früh, Mathias; Schwenkglenks, Matthias; Reich, Oliver; Schmidlin, Kurt; Staehelin, Cornelia; Battegay, Manuel; Cavassini, Matthias; Hasse, Barbara; Bernasconi, Enos; Calmy, Alexandra; Hoffmann, Matthias; Schoeni-Affolter, Franziska; Zhao, Hongwei; Bucher, Heiner C (2019). Cost estimates for HIV care and patient characteristics for health resource utilisation from linkage of claims data with the Swiss HIV Cohort Study. Clinical infectious diseases, 68(5), pp. 827-833. The University of Chicago Press 10.1093/cid/ciy564
Young, Jim; Scherrer, Alexandra U; Calmy, Alexandra; Tarr, Philip E; Bernasconi, Enos; Cavassini, Matthias; Hachfeld, Anna; Vernazza, Pietro; Günthard, Huldrych F; Bucher, Heiner C (2019). The comparative effectiveness of NRTI-sparing dual regimens in emulated trials using observational data from the Swiss HIV Cohort Study. Antiviral therapy, 24(5), pp. 343-353. International Medical Press 10.3851/IMP3310
Kouyos, Roger D; Rusert, Peter; Kadelka, Claus; Huber, Michael; Marzel, Alex; Ebner, Hanna; Schanz, Merle; Liechti, Thomas; Friedrich, Nikolas; Braun, Dominique L; Scherrer, Alexandra U; Weber, Jacqueline; Uhr, Therese; Baumann, Nicolas S; Leemann, Christine; Kuster, Herbert; Chave, Jean-Philippe; Cavassini, Matthias; Bernasconi, Enos; Hoffmann, Matthias; ... (2018). Tracing HIV-1 strains that imprint broadly neutralizing antibody responses. Nature, 561(7723), pp. 406-410. Macmillan Journals Ltd. 10.1038/s41586-018-0517-0
Bouatou, Yassine; Gayet Ageron, Angele; Bernasconi, Enos; Battegay, Manuel; Hoffmann, Matthias; Staehelin, Cornelia; Merz, Laurent; Kovari, Helen; Fux, Christoph; de Seigneux, Sophie; Calmy, Alexandra (2018). Lipodystrophy Increases the Risk of CKD Development in HIV-Positive Patients in Switzerland: The LIPOKID Study. Kidney international reports, 3(5), pp. 1089-1099. Elsevier 10.1016/j.ekir.2018.04.014
Kusejko, Katharina; Kadelka, Claus; Marzel, Alex; Battegay, Manuel; Bernasconi, Enos; Calmy, Alexandra; Cavassini, Matthias; Hoffmann, Matthias; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Perreau, Matthieu; Rauch, Andri; Günthard, Huldrych F; Kouyos, Roger D (2018). Inferring the age difference in HIV transmission pairs by applying phylogenetic methods on the HIV transmission network of the Swiss HIV Cohort Study. Virus evolution, 4(2), vey024. Oxford University Press 10.1093/ve/vey024
Kadelka, Claus; Liechti, Thomas; Ebner, Hanna; Schanz, Merle; Rusert, Peter; Friedrich, Nikolas; Stiegeler, Emanuel; Braun, Dominique L; Huber, Michael; Scherrer, Alexandra U; Weber, Jacqueline; Uhr, Therese; Kuster, Herbert; Misselwitz, Benjamin; Cavassini, Matthias; Bernasconi, Enos; Hoffmann, Matthias; Calmy, Alexandra; Battegay, Manuel; Rauch, Andri; ... (2018). Distinct, IgG1-driven antibody response landscapes demarcate individuals with broadly HIV-1 neutralizing activity. Journal of experimental medicine, 215(6), pp. 1589-1608. Rockefeller University Press 10.1084/jem.20180246
Marzel, Alex; Kusejko, Katharina; Weber, Rainer; Bruggmann, Philip; Rauch, Andri; Roth, Jan A; Bernasconi, Enos; Calmy, Alexandra; Cavassini, Matthias; Hoffmann, Matthias; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Perreau, Matthieu; Günthard, Huldrych F; Kouyos, Roger D (2018). The Cumulative Impact of Harm Reduction on the Swiss HIV Epidemic: Cohort Study, Mathematical Model, and Phylogenetic Analysis. Open Forum Infectious Diseases, 5(5), ofy078. Oxford University Press 10.1093/ofid/ofy078
Veit, Olivia Stephanie; Domingo, Cristina; Niedrig, Matthias; Staehelin, Cornelia; Sonderegger, Beat; Delphine, Héquet; Stoeckle, Marcel; Calmy, Alexandra; Schiffer, Veronique; Bernasconi, Enos; Flury, Domenica; Hatz, Christoph; Zwahlen, Marcel; Furrer, Hansjakob (2018). Long-term immune response to yellow fever vaccination in HIV-infected individuals depends on HIV-RNA suppression status: Implications for vaccination schedule. Clinical infectious diseases, 66(7), pp. 1099-1108. Oxford University Press 10.1093/cid/cix960
Bertels, Frederic; Marzel, Alex; Leventhal, Gabriel; Mitov, Venelin; Fellay, Jacques; Günthard, Huldrych F; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Battegay, Manuel; Rauch, Andri; Cavassini, Matthias; Calmy, Alexandra; Bernasconi, Enos; Schmid, Patrick; Scherrer, Alexandra U; Müller, Viktor; Bonhoeffer, Sebastian; Kouyos, Roger; ... (2018). Dissecting HIV Virulence: Heritability of Setpoint Viral Load, CD4+ T Cell Decline and Per-Parasite Pathogenicity. Molecular Biology and Evolution, 35(1), pp. 27-37. Oxford University Press 10.1093/molbev/msx246
Turk, Teja; Bachmann, Nadine; Kadelka, Claus; Böni, Jürg; Yerly, Sabine; Aubert, Vincent; Klimkait, Thomas; Battegay, Manuel; Bernasconi, Enos; Calmy, Alexandra; Cavassini, Matthias; Furrer, Hansjakob; Hoffmann, Matthias; Günthard, Huldrych F; Kouyos, Roger D (2017). Assessing the danger of self-sustained HIV epidemics in heterosexuals by population based phylogenetic cluster analysis. eLife, 6 eLife Sciences Publications 10.7554/eLife.28721
Elzi, Luigia; Erb, Stefan; Furrer, Hansjakob; Cavassini, Matthias; Calmy, Alexandra; Vernazza, Pietro; Günthard, Huldrych; Bernasconi, Enos; Battegay, Manuel (2017). Adverse events of raltegravir and dolutegravir. AIDS, 31(13), pp. 1853-1858. Lippincott Williams & Wilkins 10.1097/QAD.0000000000001590
Notter, Julia; Frey Tirri, Brigitte; Bally, Frank; Aebi Popp, Karoline; Michal, Yaron; Nadal, David; Cavassini, Matthias; Hauser, Christoph; Vernazza, Pietro; Schmidt, Axel Jeremias; Itin, Peter; Fehr, Jan; Calmy, Alexandra; Low, Nicola; Tarr, Philip (2017). Infections sexuellement transmissibles à Chlamydia trachomatis. Swiss Medical Forum, 17(34), pp. 705-711. EMH Swiss Medical Publishers 10.4414/fms.2017.03020
Sculier, Delphine; Gayet-Ageron, Angèle; Battegay, Manuel; Cavassini, Matthias; Fehr, Jan; Hirzel, Cédric; Schmid, Patrick; Bernasconi, Enos; Calmy, Alexandra (2017). Rilpivirine use in the Swiss HIV cohort study: a prospective cohort study. BMC infectious diseases, 17(1), p. 476. BioMed Central 10.1186/s12879-017-2579-2
Blaser, Nello; Bertisch, Barbara; Kouyos, Roger D; Calmy, Alexandra; Bucher, Heiner C; Cavassini, Matthias; Estill, Janne; Keiser, Olivia; Egger, Matthias; Study, The Swiss HIV Cohort (2017). Impact of screening and antiretroviral therapy on anal cancer incidence in HIV-positive MSM. AIDS, 31(13), pp. 1859-1866. Lippincott Williams & Wilkins 10.1097/QAD.0000000000001546
Béguelin, Charles Antoine; Friolet, Nicole; Moradpour, Darius; Sahli, Roland; Suter, Franziska Marta; Lüthi, Alexander; Cavassini, Matthias; Günthard, Huldrych F; Battegay, Manuel; Bernasconi, Enos; Schmid, Patrick; Calmy, Alexandra; Atkinson, Andrew; Rauch, Andri; Wandeler, Gilles (2017). Impact of tenofovir on hepatitis delta virus replication in the Swiss HIV Cohort Study. Clinical infectious diseases, 64(9), pp. 1275-1278. Oxford University Press 10.1093/cid/cix125
Combes, Jean-Damien; Clifford, Gary M; Egger, Matthias; Cavassini, Matthias; Hirsch, Hans H; Hauser, Christoph; Calmy, Alexandra; Schmid, Patrick; Bernasconi, Enos; Günthard, Huldrych F; Franceschi, Silvia; Waterboer, Tim; Scherrer, Alexandra U; Swiss HIV Cohort, Study (2017). Human papillomavirus antibody response following HAART initiation among MSM. AIDS, 31(4), pp. 561-569. Lippincott Williams & Wilkins 10.1097/QAD.0000000000001354
Güler, Aysel; Moser, André; Calmy, Alexandra; Günthard, Huldrych F; Bernasconi, Enos; Furrer, Hansjakob; Fux, Christoph A; Battegay, Manuel; Cavassini, Matthias; Vernazza, Pietro; Zwahlen, Marcel; Egger, Matthias (2017). Life expectancy in HIV-positive persons in Switzerland: matched comparison with general population. AIDS, 31(3), pp. 427-436. Lippincott Williams & Wilkins 10.1097/QAD.0000000000001335
Schäfer, Juliane; Young, Jim; Calmy, Alexandra; Nicca, Dunja; Hasse, Barbara; Brun del Re, Claudia; Cavassini, Matthias; Bernasconi, Enos; Schmidt-Trucksäss, Arno; Bucher, Heiner C (2017). High prevalence of physical inactivity among patients from the Swiss HIV Cohort Study. AIDS Care-Psychological and Socio-Medical Aspects of AIDS/HIV, 29(8), pp. 1056-1061. Taylor & Francis 10.1080/09540121.2016.1274016
Shilaih, Mohaned; Marzel, Alex; Braun, Dominique L; Scherrer, Alexandra U; Kovari, Helen; Young, Jim; Calmy, Alexandra; Darling, Katharine; Battegay, Manuel; Hoffmann, Matthias; Bernasconi, Enos; Thurnheer Zürcher, Maria Christine; Günthard, Huldrych F; Kouyos, Roger D (2017). Factors associated with syphilis incidence in the HIV-infected in the era of highly active antiretrovirals. Medicine, 96(2), e5849. Lippincott Williams & Wilkins 10.1097/MD.0000000000005849
Béguelin, Charles Antoine; Moradpour, Darius; Sahli, Roland; Suter, Franziska Marta; Lüthi, Alexander; Cavassini, Matthias; Günthard, Huldrych F; Battegay, Manuel; Bernasconi, Enos; Schmid, Patrick; Calmy, Alexandra; Braun, Dominique; Furrer, Hansjakob; Rauch, Andri; Wandeler, Gilles (2017). Hepatitis delta-associated mortality in HIV/HBV-coinfected patients. Journal of hepatology, 66(2), pp. 297-303. Elsevier 10.1016/j.jhep.2016.10.007
Rusert, Peter; Kouyos, Roger D; Kadelka, Claus; Ebner, Hanna; Schanz, Merle; Huber, Michael; Braun, Dominique L; Hozé, Nathanael; Scherrer, Alexandra; Magnus, Carsten; Weber, Jacqueline; Uhr, Therese; Cippa, Valentina; Thorball, Christian W; Kuster, Herbert; Cavassini, Matthias; Bernasconi, Enos; Hoffmann, Matthias; Calmy, Alexandra; Battegay, Manuel; ... (2016). Determinants of HIV-1 broadly neutralizing antibody induction. Nature medicine, 22(11), pp. 1260-1267. Nature Publishing Group 10.1038/nm.4187
Wandeler, Gilles; Mulenga, Lloyd; Vinikoor, Michael J; Kovari, Helen; Battegay, Manuel; Calmy, Alexandra; Cavassini, Matthias; Bernasconi, Enos; Schmid, Patrick; Bolton-Moore, Carolyn; Sinkala, Edford; Chi, Benjamin H; Egger, Matthias; Rauch, Andri (2016). Liver fibrosis in treatment-naïve HIV-infected and HIV/HBV co-infected patients: Zambia and Switzerland compared. International journal of infectious diseases, 51, pp. 97-102. Elsevier 10.1016/j.ijid.2016.08.028
Salazar-Vizcaya, Luisa; Kouyos, Roger D; Zahnd, Cindy; Wandeler, Gilles; Battegay, Manuel; Darling, Katharine Elizabeth Ana; Bernasconi, Enos; Calmy, Alexandra; Vernazza, Pietro; Furrer, Hansjakob; Egger, Matthias; Keiser, Olivia; Rauch, Andri (2016). Hepatitis C virus transmission among HIV-infected men who have sex with men: Modeling the effect of behavioral and treatment interventions. Hepatology, 64(6), pp. 1856-1869. Wiley Interscience 10.1002/hep.28769
Stucki, David; Ballif, Marie; Egger, Matthias; Furrer, Hansjakob; Altpeter, Ekkehardt; Battegay, Manuel; Droz, Sara Christine; Bruderer, Thomas; Coscolla, Mireia; Borrell, Sonia; Zürcher, Kathrin; Janssens, Jean-Paul; Calmy, Alexandra; Mazza Stalder, Jesica; Jaton, Katia; Rieder, Hans L; Pfyffer, Gaby E; Siegrist, Hans H; Hoffmann, Matthias; Fehr, Jan; ... (2016). Standard genotyping overestimates transmission of Mycobacterium tuberculosis among immigrants in a low incidence country. Journal of clinical microbiology, 54(7), pp. 1862-1870. American Society for Microbiology 10.1128/JCM.00126-16
Scherrer, Alexandra U; Yang, Wan-Lin; Kouyos, Roger D; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Cavassini, Matthias; Battegay, Manuel; Hauser, Christoph; Calmy, Alexandra; Schmid, Patrick; Bernasconi, Enos; Günthard, Huldrych F (2016). Successful prevention of transmission of integrase resistance in the Swiss HIV Cohort Study. Journal of infectious diseases, 214(3), pp. 399-402. Oxford University Press 10.1093/infdis/jiw165
Scherrer, Alexandra U; von Wyl, Viktor; Yang, Wan-Lin; Kouyos, Roger; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Cavassini, Matthias; Battegay, Manuel; Furrer, Hansjakob; Calmy, Alexandra; Vernazza, Pietro; Bernasconi, Enos; Günthard, Huldrych F (2016). Emergence of acquired HIV-1 drug resistance has almost been stopped in Switzerland - a 15 year prospective cohort analysis. Clinical infectious diseases, 62(10), pp. 1310-1317. Oxford University Press 10.1093/cid/ciw128
Wandeler, Gilles; Kraus, David; Fehr, Jan; Conen, Anna; Calmy, Alexandra; Orasch, Christina; Battegay, Manuel; Schmid, Patrick; Bernasconi, Enos; Furrer, Hansjakob (2016). The J-curve in HIV: low and moderate alcohol intake predicts mortality but not the occurrence of major cardiovascular events. Journal of acquired immune deficiency syndromes JAIDS, 71(3), pp. 302-9. Lippincott Williams & Wilkins 10.1097/QAI.0000000000000864
Marzel, Alex; Shilaih, Mohaned; Yang, Wan-Lin; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Braun, Dominique L; Calmy, Alexandra; Furrer, Hansjakob; Cavassini, Matthias; Battegay, Manuel; Vernazza, Pietro L; Bernasconi, Enos; Günthard, Huldrych F; Kouyos, Roger D (2016). HIV-1 Transmission During Recent Infection and During Treatment Interruptions as Major Drivers of New Infections in the Swiss HIV Cohort Study. Clinical infectious diseases, 62(1), pp. 115-122. Oxford University Press 10.1093/cid/civ732
Elzi, Luigia; Conen, Anna; Patzen, Annalea; Fehr, Jan; Cavassini, Matthias; Calmy, Alexandra; Schmid, Patrick; Bernasconi, Enos; Furrer, Hansjakob; Battegay, Manuel (2016). Ability to Work and Employment Rates in Human Immunodeficiency Virus (HIV)-1-Infected Individuals Receiving Combination Antiretroviral Therapy: The Swiss HIV Cohort Study. Open Forum Infectious Diseases, 3(1), ofw022. Oxford University Press 10.1093/ofid/ofw022
Hachfeld, Anna; Ledergerber, Bruno; Darling, Katharine; Weber, Rainer; Calmy, Alexandra; Battegay, Manuel; Sugimoto, Kiyoshi; Di Benedetto, Caroline; Fux, Christoph A; Tarr, Philip E; Kouyos, Roger; Furrer, Hansjakob; Wandeler, Gilles (2015). Reasons for late presentation to HIV care in Switzerland. Journal of the International AIDS Society, 18(1), p. 20317. BioMed Central 10.7448/IAS.18.1.20317
Glass, Tracy R; Sterne, Jonathan A C; Schneider, Marie-Paule; De Geest, Sabina; Nicca, Dunja; Furrer, Hansjakob; Günthard, Huldrych F; Bernasconi, Enos; Calmy, Alexandra; Rickenbach, Martin; Battegay, Manuel; Bucher, Heiner C (2015). Self-reported nonadherence to antiretroviral therapy as a predictor of viral failure and mortality. AIDS, 29(16), pp. 2195-2200. Lippincott Williams & Wilkins 10.1097/QAD.0000000000000782
Kohler, Philipp; Schmidt, Axel J; Cavassini, Matthias; Furrer, Hansjakob; Calmy, Alexandra; Battegay, Manuel; Bernasconi, Enos; Ledergerber, Bruno; Vernazza, Pietro (2015). The HIV care cascade in Switzerland: reaching the UNAIDS/WHO targets for patients diagnosed with HIV. AIDS, 29(18), pp. 2509-2515. Lippincott Williams & Wilkins 10.1097/QAD.0000000000000878
Hasse, Barbara; Tarr, Philip E; Marques-Vidal, Pedro; Waeber, Gerard; Preisig, Martin; Mooser, Vincent; Valeri, Fabio; Djalali, Sima; Rauch, Andri; Bernasconi, Enos; Calmy, Alexandra; Cavassini, Matthias; Vernazza, Pietro; Battegay, Manuel; Weber, Rainer; Senn, Oliver; Vollenweider, Peter; Ledergerber, Bruno; Aubert, V; Barth, J; ... (2015). Strong Impact of Smoking on Multimorbidity and Cardiovascular Risk Among Human Immunodeficiency Virus-Infected Individuals in Comparison With the General Population. Open Forum Infectious Diseases, 2(3), ofv108. Oxford University Press 10.1093/ofid/ofv108
Bihl, Florian; Martinetti, Gladys; Wandeler, Gilles; Weber, Rainer; Ledergeber, Bruno; Calmy, Alexandra; Battegay, Manuel; Cavassini, Matthias; Vernazza, Pietro; Caminada, Anna-Paola; Rickenbach, Martin; Bernasconi, Enos (2015). HBV genotypes and response to tenofovir disoproxil fumarate in HIV/HBV-coinfected persons. BMC gastroenterology, 15, p. 79. BioMed Central 10.1186/s12876-015-0308-0
Ciaffi, Laura; Cavassini, Matthias; Genne, Daniel; Delhumeau, Cecile; Spycher Elbes, Rachel; Hill, Andrew; Wandeler, Gilles; Fehr, Jan; Stoeckle, Marcel; Schmid, Patrick; Hirschel, Bernard; Montecucco, Fabrizio; Calmy, Alexandra (2015). Switch to etravirine for HIV-positive patients receiving statin treatment: a prospective study. European journal of clinical investigation EJCI, 45(7), pp. 720-730. Wiley-Blackwell 10.1111/eci.12464
Young, Jim; Xiao, Yongling; Moodie, Erica E M; Abrahamowicz, Michal; Klein, Marina B; Bernasconi, Enos; Schmid, Patrick; Calmy, Alexandra; Cavassini, Matthias; Cusini, Alexia; Weber, Rainer; Bucher, Heiner C (2015). The effect of cumulating exposure to abacavir on the risk of cardiovascular disease events in patients from the Swiss HIV Cohort Study. Journal of acquired immune deficiency syndromes JAIDS, 69(4), pp. 413-421. Lippincott Williams & Wilkins 10.1097/QAI.0000000000000662
Kouyos, Roger D; Hasse, Barbara; Calmy, Alexandra; Cavassini, Matthias; Furrer, Hansjakob; Stöckle, Marcel; Vernazza, Pietro L; Bernasconi, Enos; Weber, Rainer; Günthard, Huldrych F; Aubert, V; Battegay, M; Bernasconi, E; Böni, J; Bucher, H C; Burton-Jeangros, C; Calmy, A; Cavassini, M; Dollenmaier, G; Egger, M; ... (2015). Increases in Condomless Sex in the Swiss HIV Cohort Study. Open Forum Infectious Diseases, 2(2), ofv077. Oxford University Press 10.1093/ofid/ofv077
Güler, Aysel; Schöni-Affolter, Franziska; Moser, André; Bertisch, Barbara; Bucher, Heiner C; Calmy, Alexandra; Cavassini, Matthias; Ledergerber, Bruno; Wandeler, Gilles; Egger, Matthias (2015). Neighbourhood socio-economic position, late presentation and outcomes in people living with HIV in Switzerland. AIDS, 29(2), pp. 231-238. Lippincott Williams & Wilkins 10.1097/QAD.0000000000000524
Carballo, David; Delhumeau, Cécile; Carballo, Sebastian; Bähler, Caroline; Radovanovic, Dragona; Hirschel, Bernard; Clerc, Olivier; Bernasconi, Enos; Fasel, Dominique; Schmid, Patrick; Cusini, Alexia; Fehr, Jan; Erne, Paul; Keller, Pierre-Fréderic; Ledergerber, Bruno; Calmy, Alexandra (2015). Increased mortality after a first myocardial infarction in human immunodeficiency virus-infected patients; a nested cohort study. AIDS research and therapy, 12(4), p. 4. BioMed Central 10.1186/s12981-015-0045-z
Perkins, Molly R; Bartha, Istvan; Timmer, J Katherina; Liebner, Julia C; Wollinsky, David; Günthard, Huldrych F; Hauser, Christoph; Bernasconi, Enos; Hoffmann, Matthias; Calmy, Alexandra; Battegay, Manuel; Telenti, Amalio; Douek, Daniel C; Fellay, Jacques (2015). The interplay between host genetic variation, viral replication and microbial translocation in untreated HIV-infected individuals. Journal of infectious diseases, 212(4), pp. 578-584. Oxford University Press 10.1093/infdis/jiv089
Young, Jim; Rickenbach, Martin; Calmy, Alexandra; Bernasconi, Enos; Stähelin, Cornelia Johanna; Schmid, Patrick; Cavassini, Matthias; Battegay, Manuel; Günthard, Huldrych F; Bucher, Heiner C (2015). Transient detectable viremia and the risk of viral rebound in patients from the Swiss HIV Cohort Study. BMC infectious diseases, 15(1), p. 382. BioMed Central 10.1186/s12879-015-1120-8
Gisler, Valentin; Kraus, David; Nemeth, Johannes; Lecompte, Marthe Than; Merz, Laurent; Stoeckle, Marcel; Schmid, Patrick; Bernasconi, Enos; Weber, Rainer; Cavassini, Matthias; Calmy, Alexandra; Elzi, Luigia; Furrer, Hansjakob (2 November 2014). AIDS defining opportunistic infections in patients with high CD4 counts in the combination antiretroviral therapy (cART) era: things ain't what they used to be. Journal of the International AIDS Society, 17(Suppl 3), p. 19621. BioMed Central 10.7448/IAS.17.4.19621
Regoes, Roland R; McLaren, Paul J; Battegay, Manuel; Bernasconi, Enos; Calmy, Alexandra; Günthard, Huldrych F; Hoffmann, Matthias; Rauch, Andri; Telenti, Amalio; Fellay, Jacques (2014). Disentangling human tolerance and resistance against HIV. PLoS biology, 12(9), e1001951. Public Library of Science 10.1371/journal.pbio.1001951
von Braun, Amrei; Furrer, Hansjakob; Battegay, Manuel; Calmy, Alexandra; Cavassini, Matthias; Vernazza, Pietro; Bernasconi, Enos; Weber, Rainer; Günthard, Huldrych F (2014). Antiretrovirale Therapie. Therapeutische Umschau, 71(8), pp. 461-468. Huber 10.1024/0040-5930/a000538
Metzner, Karin J.; Scherrer, Alexandra U.; Von Wyl, Viktor; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Furrer, Hansjakob; Hirsch, Hans H.; Vernazza, Pietro L.; Cavassini, Matthias; Calmy, Alexandra; Bernasconi, Enos; Weber, Rainer; Günthard, Huldrych F. (2014). Limited clinical benefit of minority K103N and Y181C-variant detection in addition to routine genotypic resistance testing in antiretroviral therapy-naive patients. AIDS, 28(15), pp. 2231-2239. Lippincott Williams & Wilkins 10.1097/QAD.0000000000000397
Hasse, Barbara; Walker, A Sarah; Fehr, Jan; Furrer, Hansjakob; Hoffmann, Matthias; Battegay, Manuel; Calmy, Alexandra; Fellay, Jacques; Di Benedetto, Caroline; Weber, Rainer; Ledergerber, Bruno; Swiss HIV Cohort, Study (2014). Cotrimoxazole prophylaxis is associated with reduced risk of incident tuberculosis in participants in the Swiss HIV Cohort Study. Antimicrobial agents and chemotherapy, 58(4), pp. 2363-2368. American Society for Microbiology 10.1128/AAC.01868-13
Kouyos, Roger D; Rauch, Andri; Böni, Jürg; Yerly, Sabine; Shah, Cyril; Aubert, Vincent; Klimkait, Thomas; Kovari, Helen; Calmy, Alexandra; Cavassini, Matthias; Battegay, Manuel; Vernazza, Pietro L; Bernasconi, Enos; Ledergerber, Bruno; Günthard, Huldrych F; Egger, Matthias; Furrer, Hansjakob; Keiser, Olivia; Schöni-Affolter, Franziska and Swiss HIV Cohort Study, (2014). Clustering of HCV coinfections on HIV phylogeny indicates domestic and sexual transmission of HCV. International journal of epidemiology, 43(3), pp. 887-896. Oxford University Press 10.1093/ije/dyt276
Mulenga, Lloyd; Musonda, Patrick; Mwango, Albert; Vinikoor, Michael J.; Davies, Mary-Ann; Mweemba, Aggrey; Calmy, Alexandra; Stringer, Jeffrey S.; Keiser, Olivia; Chi, Benjamin H.; Wandeler, Gilles (2014). Impact of Baseline Renal Function on Tenofovir-containing Antiretroviral Therapy Outcomes in Zambia. Clinical infectious diseases, 58(10), pp. 1473-1480. Oxford University Press 10.1093/cid/ciu117
Wang, Qing; Young, Jim; Bernasconi, Enos; Vernazza, Pietro; Calmy, Alexandra; Cavassini, Matthias; Furrer, Hansjakob; Fehr, Jan; Bucher, Heiner C; Battegay, Manuel; Swiss Hiv Cohort Study, SHCS (2014). Virologic and immunologic responses in treatment-naive patients to ritonavir-boosted atazanavir or efavirenz with a common backbone. HIV clinical trials, 15(3), pp. 92-103. Thomas Land Publishers 10.1310/hct1503-92
Kouyos, Roger D; Rauch, Andri; Braun, Dominique L; Yang, Wan-Lin; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Shah, Cyril; Kovari, Helen; Calmy, Alexandra; Cavassini, Matthias; Battegay, Manuel; Vernazza, Pietro L; Bernasconi, Enos; Ledergerber, Bruno; Günthard, Huldrych F (2014). Higher Risk of Incident HCV-Coinfections in MSM with a Wide HIV Transmission Bottleneck. Journal of infectious diseases, 210(10), pp. 1555-1561. Oxford University Press 10.1093/infdis/jiu315
Morard, Isabelle; Clément, Sophie; Calmy, Alexandra; Mangia, Alessandra; Cerny, Andrea; De Gottardi, Andrea; Gorgievski, Meri; Heim, Markus; Malinverni, Raffaele; Moradpour, Darius; Müllhaupt, Beat; Semela, David; Pascarella, Stéphanie; Bochud, Pierre-Yves; Negro, Franco (2014). Clinical significance of the CCR5delta32 allele in hepatitis C. PLoS ONE, 9(9), e106424. Public Library of Science 10.1371/journal.pone.0106424
von Wyl, Viktor; Klimkait, Thomas; Yerly, Sabine; Nicca, Dunja; Furrer, Hansjakob; Cavassini, Matthias; Calmy, Alexandra; Bernasconi, Enos; Böni, Jürg; Aubert, Vincent; Günthard, Huldrych F.; Bucher, Heiner C.; Glass, Tracy R.; Wainberg, Mark (2013). Adherence as a Predictor of the Development of Class-Specific Resistance Mutations: The Swiss HIV Cohort Study. PLoS ONE, 8(10), e77691. Public Library of Science 10.1371/journal.pone.0077691
Bertisch, Barbara; Franceschi, Silvia; Lise, Mauro; Vernazza, Pietro; Keiser, Olivia; Schöni-Affolter, Franziska; Bouchardy, Christine; Dehler, Silvia; Levi, Fabio; Jundt, Gernot; Ess, Silvia; Pawlita, Michael; Kovari, Helen; Wandeler, Gilles; Calmy, Alexandra; Cavassini, Matthias; Stöckle, Marcel; Clifford, Gary (2013). Risk factors for anal cancer in persons infected with HIV: a nested case-control study in the Swiss HIV Cohort Study. American journal of epidemiology, 178(6), pp. 877-884. Oxford University Press 10.1093/aje/kwt153
Aouri, Manel; Calmy, Alexandra; Hirschel, Bernard; Telenti, Amalio; Buclin, Thierry; Cavassini, Matthias; Rauch, Andri; Decosterd, Laurent A. (2013). A validated assay by liquid chromatography-tandem mass spectrometry for the simultaneous quantification of elvitegravir and rilpivirine in HIV positive patients. Journal of mass spectrometry, 48(5), pp. 616-625. Wiley 10.1002/jms.3200
Nüesch, Reto; Wang, Qing; Elzi, Luigia; Bernasconi, Enos; Weber, Rainer; Cavassini, Matthias; Vernazza, Pietro; Thurnheer, Maria C.; Calmy, Alexandra; Battegay, Manuel; Bucher, Heiner C. (2013). Risk of Cardiovascular Events and Blood Pressure Control in Hypertensive HIV-Infected Patients: HIV Cohort Study (SHCS). JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES, 62(4), pp. 396-404. Lippincott Williams & Wilkins 10.1097/QAI.0b013e3182847cd0
Fenner, Lukas; Egger, Matthias; Bodmer, Thomas; Furrer, Hansjakob; Ballif, Marie; Battegay, Manuel; Helbling, Peter; Fehr, Jan; Gsponer, Thomas; Rieder, Hans L.; Zwahlen, Marcel; Hoffmann, Matthias; Bernasconi, Enos; Cavassini, Matthias; Calmy, Alexandra; Dolina, Marisa; Frei, Reno; Janssens, Jean-Paul; Borrell, Sonia; Stucki, David; ... (2013). HIV infection disrupts the sympatric host-pathogen relationship in human tuberculosis. PLoS genetics, 9(3), e1003318. Public Library of Science 10.1371/journal.pgen.1003318
Lubomirov, Rubin; Arab-Alameddine, Mona; Rotger, Margalida; Fayet-Mello, Aurélie; Martinez, Raquel; Guidi, Monia; di Iulio, Julia; Cavassini, Matthias; Günthard, Huldrych F.; Furrer, Hansjakob; Marzolini, Catia; Bernasconi, Enos; Calmy, Alexandra; Buclin, Thierry; Decosterd, Laurent A.; Csajka, Chantal; Telenti, Amalio (2013). Pharmacogenetics-based population pharmacokinetic analysis of etravirine in HIV-1 infected individuals. Pharmacogenetics and genomics, 23(1), pp. 9-18. Lippincott Williams & Wilkins 10.1097/FPC.0b013e32835ade82
Wandeler, Gilles; Gsponer, Thomas; Bihl, Florian; Bernasconi, Enos; Cavassini, Matthias; Kovari, Helen; Schmid, Patrick; Battegay, Manuel; Calmy, Alexandra; Egger, Matthias; Furrer, Hansjakob; Rauch, Andri (2013). Hepatitis B virus infection is associated with impaired immunological recovery during antiretroviral therapy in the Swiss HIV cohort study. Journal of infectious diseases, 208(9), pp. 1454-1458. Cary, N.C.: Oxford University Press 10.1093/infdis/jit351
The Collaboration of Observational HIV Epidemiological Research, ; Lewden, Charlotte; Bouteloup, Vincent; De Wit, Stéphane; Sabin, Caroline; Mocroft, Amanda; Wasmuth, Jan Christian; van Sighem, Ard; Kirk, Ole; Obel, Niels; Panos, George; Ghosn, Jade; Dabis, François; Mary-Krause, Murielle; Leport, Catherine; Perez-Hoyos, Santiago; Sobrino-Vegas, Paz; Stephan, Christoph; Castagna, Antonella; Antinori, Andrea; ... (2012). All-cause mortality in treated HIV-infected adults with CD4 >=500/mm3 compared with the general population: evidence from a large European observational cohort collaboration{dagger}. International journal of epidemiology, 41(2), pp. 433-45. Oxford: Oxford University Press 10.1093/ije/dyr164
Fenner, Lukas; Egger, Matthias; Bodmer, Thomas; Altpeter, Ekkehardt; Zwahlen, Marcel; Jaton, Katia; Pfyffer, Gaby E; Borrell, Sonia; Dubuis, Olivier; Bruderer, Thomas; Siegrist, Hans H; Furrer, Hansjakob; Calmy, Alexandra; Fehr, Jan; Stalder, Jesica Mazza; Ninet, Béatrice; Böttger, Erik C; Gagneux, Sebastien; HIV Cohort Study, Swiss Molecular Epidemiol (2012). Effect of Mutation and Genetic Background on Drug Resistance in Mycobacterium tuberculosis. Antimicrobial agents and chemotherapy, 56(6), pp. 3047-3053. Washington, D.C.: American Society for Microbiology 10.1128/AAC.06460-11
Fenner, Lukas; Gagneux, Sebastien; Helbling, Peter; Battegay, Manuel; Rieder, Hans L; Pfyffer, Gaby E; Zwahlen, Marcel; Furrer, Hansjakob; Siegrist, Hans H; Fehr, Jan; Dolina, Marisa; Calmy, Alexandra; Stucki, David; Jaton, Katia; Janssens, Jean-Paul; Stalder, Jesica Mazza; Bodmer, Thomas; Ninet, Beatrice; Böttger, Erik C; Egger, Matthias; ... (2012). Mycobacterium tuberculosis transmission in a country with low tuberculosis incidence: role of immigration and HIV infection. Journal of clinical microbiology, 50(2), pp. 388-395. Washington, D.C.: American Society for Microbiology 10.1128/JCM.05392-11
Keiser, Olivia; Spycher, Ben; Rauch, Andri; Calmy, Alexandra; Cavassini, Matthias; Glass, Tracy R; Nicca, Dunja; Ledergerber, Bruno; Egger, Matthias; Swiss HIV, Cohort Study (2012). Outcomes of antiretroviral therapy in the Swiss HIV Cohort Study: latent class analysis. AIDS and behavior, 16(2), pp. 245-55. New York, N.Y.: Springer 10.1007/s10461-011-9971-5
Staehelin, Cornelia; Keiser, Olivia; Calmy, Alexandra; Weber, Rainer; Elzi, Luigia; Cavassini, Matthias; Schmid, Patrick; Bernasconi, Enos; Furrer, Hansjakob; Swiss HIV Cohort Study, (2012). Longer term clinical and virological outcome of sub-Saharan African participants on antiretroviral treatment in the Swiss HIV Cohort Study. Journal of acquired immune deficiency syndromes JAIDS, 59(1), pp. 79-85. Philadelphia, Pa.: Lippincott Williams & Wilkins 10.1097/QAI.0b013e318236be70
Calmy, Alexandra; Balestre, Eric; Bonnet, Fabrice; Boulle, Andrew; Sprinz, Eduardo; Wood, Robin; Delaporte, Eric; Messou, Eugène; McIntyre, James; El Filali, Kamal Marhoum; Schechter, Mauro; Kumarasamy, N; Bangsberg, David; McPhail, Patrick; Van Der Borght, Stefaan; Zala, Carlos; Egger, Matthias; Thiébaut, Rodolphe; Dabis, François and T-LINC of IeDEA Collaboration (Asia South America East Southe, (2012). Mean CD4 cell count changes in patients failing a first-line antiretroviral therapy in resource-limited settings. BMC infectious diseases, 12, p. 147. London: BioMed Central 10.1186/1471-2334-12-147
Wandeler, Gilles; Gsponer, Thomas; Bregenzer, Andrea; Günthard, Huldrych F; Clerc, Olivier; Calmy, Alexandra; Stöckle, Marcel; Bernasconi, Enos; Furrer, Hansjakob; Rauch, Andri; Swiss HIV Cohort Study, (2012). Hepatitis C virus infections in the Swiss HIV Cohort Study: a rapidly evolving epidemic. Clinical infectious diseases, 55(10), pp. 1408-16. Cary, N.C.: Oxford University Press 10.1093/cid/cis694
Scherrer, Alexandra U.; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Aubert, Vincent; Furrer, Hansjakob; Calmy, Alexandra; Cavassini, Matthias; Elzi, Luigia; Vernazza, Pietro L.; Bernasconi, Enos; Ledergerber, Bruno; Günthard, Huldrych F.; Swiss HIV Cohort Study (SHCS), (2012). Long-lasting protection of activity of nucleoside reverse transcriptase inhibitors and protease inhibitors (PIs) by boosted PI containing regimens. PLoS ONE, 7(11), e50307. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0050307
Scherrer, Alexandra U.; Ledergerber, Bruno; von Wyl, Viktor; Böni, Jürg; Yerly, Sabine; Klimkait, Thomas; Cellerai, Cristina; Furrer, Hansjakob; Calmy, Alexandra; Cavassini, Matthias; Elzi, Luigia; Vernazza, Pietro L.; Bernasconi, Enos; Günthard, Huldrych F.; Swiss HIV Cohort Study, (2012). Minor protease inhibitor mutations at baseline do not increase the risk for a virological failure in HIV-1 subtype B infected patients. PLoS ONE, 7(6), e37983. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0037983
Young, Jim; Schäfer, Juliane; Fux, Christoph A; Furrer, Hansjakob; Bernasconi, Enos; Vernazza, Pietro; Calmy, Alexandra; Cavassini, Matthias; Weber, Rainer; Battegay, Manuel; Bucher, Heiner C; Swiss HIV Cohort Study, (2012). Renal function in patients with HIV starting therapy with tenofovir and either efavirenz, lopinavir or atazanavir. AIDS, 26(5), pp. 567-75. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e32834f337c
Schöni-Affolter, Franziska; Keiser, Olivia; Mwango, Albert; Stringer, Jeffrey; Ledergerber, Bruno; Mulenga, Lloyd; Bucher, Heiner C.; Westfall, Andrew O.; Calmy, Alexandra; Boulle, Andrew; Chintu, Namwinga; Egger, Matthias; Chi, Benjamin H.; Swiss HIV, Cohort Study; IeDEA, Southern Africa (2011). Estimating loss to follow-up in HIV-infected patients on antiretroviral therapy: the effect of the competing risk of death in Zambia and Switzerland. PLoS ONE, 6(12), e27919. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0027919
Marzolini, Catia; Back, David; Weber, Rainer; Furrer, Hansjakob; Cavassini, Matthias; Calmy, Alexandra; Vernazza, Pietro; Bernasconi, Enos; Khoo, Saye; Battegay, Manuel; Elzi, Luigia; Swiss HIV Cohort Study Members, (2011). Ageing with HIV: medication use and risk for potential drug-drug interactions. Journal of antimicrobial chemotherapy, 66(9), pp. 2107-11. Oxford: Oxford University Press 10.1093/jac/dkr248
Boillat Blanco, Noémie; Probst, Arnold; Da Costa, Vreneli Waelti; Giulieri, Stefano; Bernasconi, Enos; Calmy, Alexandra; Elzi, Luigia; Rauch, Andri; Weber, Rainer; Bertisch, Barbara; Cavassini, Matthias; Bochud, Pierre-Yves (2011). Impact of a nurse vaccination program on hepatitis B immunity in a Swiss HIV clinic. Journal of acquired immune deficiency syndromes JAIDS, 58(5), pp. 472-4. Philadelphia, Pa.: Lippincott Williams & Wilkins 10.1097/QAI.0b013e318237915e
Nguyen, Alain; Calmy, Alexandra; Delhumeau, Cecile; Mercier, Isabelle; Cavassini, Matthias; Mello, Aurelie F; Elzi, Luigia; Rauch, Andri; Bernasconi, Enos; Schmid, Patrick; Hirschel, Bernard (2011). A randomized cross-over study to compare raltegravir and efavirenz (SWITCH-ER study). AIDS, 25(12), pp. 1481-7. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e328348dab0
Nguyen, Alain; Calmy, Alexandra; Delhumeau, Cécile; Mercier, Isabelle K; Cavassini, Matthias; Fayet-Mello, Aurélie; Elzi, Luigia; Genné, Daniel; Rauch, Andri; Bernasconi, Enos; Hirschel, Bernard; Swiss HIV Cohort Study, (2011). A randomized crossover study to compare efavirenz and etravirine treatment. AIDS, 25(1), pp. 57-63. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e32833f9f63
Pujades-Rodríguez, Mar; Balkan, Suna; Arnould, Line; Brinkhof, Martin A W; Calmy, Alexandra (2010). Treatment failure and mortality factors in patients receiving second-line HIV therapy in resource-limited countries. JAMA - the journal of the American Medical Association, 304(3), pp. 303-312. Chicago, Ill.: American Medical Association 10.1001/jama.2010.980
Marzolini, Catia; Elzi, Luigia; Gibbons, Sara; Weber, Rainer; Fux, Christoph; Furrer, Hansjakob; Chave, Jean-Philippe; Cavassini, Matthias; Bernasconi, Enos; Calmy, Alexandra; Vernazza, Pietro; Khoo, Saye; Ledergerber, Bruno; Back, David; Battegay, Manuel; Swiss HIV Cohort Study, (2010). Prevalence of comedications and effect of potential drug-drug interactions in the Swiss HIV Cohort Study. Antiviral therapy, 15(3), pp. 413-23. London: International Medical Press 10.3851/IMP1540
Lubomirov, Rubin; di Iulio, Julia; Fayet, Aurélie; Colombo, Sara; Martinez, Raquel; Marzolini, Catia; Furrer, Hansjakob; Vernazza, Pietro; Calmy, Alexandra; Cavassini, Matthias; Ledergerber, Bruno; Rentsch, Katharina; Descombes, Patrick; Buclin, Thierry; Decosterd, Laurent A; Csajka, Chantal; Telenti, Amalio; Swiss HIV Cohort Study, (2010). ADME pharmacogenetics: investigation of the pharmacokinetics of the antiretroviral agent lopinavir coformulated with ritonavir. Pharmacogenetics and genomics, 20(4), pp. 217-30. London: Lippincott Williams & Wilkins 10.1097/FPC.0b013e328336eee4
Mueller, Nicolas J; Fux, Christoph A; Ledergerber, Bruno; Elzi, Luigia; Schmid, Patrick; Dang, Thanh; Magenta, Lorenzo; Calmy, Alexandra; Vergopoulos, Athanasios; Bischoff-Ferrari, Heike A; Swiss HIV Cohort Study, (2010). High prevalence of severe vitamin D deficiency in combined antiretroviral therapy-naive and successfully treated Swiss HIV patients. AIDS, 24(8), pp. 1127-34. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e328337b161
Ferry, Tristan; Hirschel, Bernard; Dang, Thanh; Meylan, Pascal; Delhumeau, Cécile; Rauch, Andri; Weber, Rainer; Elzi, Luigia; Bernasconi, Enos; Schmid, Patrick; Calmy, Alexandra; Swiss HIV Cohort Study, (2010). Infrequent replication of parvovirus B19 and erythrovirus genotypes 2 and 3 among HIV-infected patients with chronic anemia. Clinical infectious diseases, 50(1), pp. 115-8. Cary, N.C.: The University of Chicago Press 10.1086/649004
Calmy, Alexandra; Fux, Christoph A.; Delhumeau, Cécile; Carr, Andrew (2010). Reply to Gazzola et al. Journal of infectious diseases, 202(2), pp. 331-332. The University of Chicago Press 10.1086/653585
Calmy, Alexandra; Fux, Christoph A; Norris, Richard; Vallier, Nathalie; Delhumeau, Cécile; Samaras, Katherine; Hesse, Karl; Hirschel, Bernard; Cooper, David A; Carr, Andrew (2009). Low bone mineral density, renal dysfunction, and fracture risk in HIV infection: a cross-sectional study. Journal of infectious diseases, 200(11), pp. 1746-54. Cary, N.C.: The University of Chicago Press 10.1086/644785
Zuber, Jean-Philippe; Calmy, Alexandra; Evison, John M.; Hasse, Barbara; Schiffer, Veronique; Wagels, Thomas; Nuesch, Reto; Magenta, Lorenzo; Ledergerber, Bruno; Jenni, Rolf; Speich, Rudolf; Opravil, Milos (2004). Pulmonary Arterial Hypertension Related to HIV Infection: Improved Hemodynamics and Survival Associated with Antiretroviral Therapy. Clinical infectious diseases, 38(8), pp. 1178-1185. The University of Chicago Press 10.1086/383037