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Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Calzavarini, Sara; Brodard, Justine; Quarroz, Claudia; Maire, Livia; Nützi, Raphael; Jankovic, Jovana; Rotondo, Laura C; Giabbani, Evelyne; Fiedler, Georg Martin; Nagler, Michael; Angelillo-Scherrer, Anne (2019). Thrombin generation measurement using the ST Genesia Thrombin Generation System in a cohort of healthy adults: Normal values and variability. Research and practice in thrombosis and haemostasis, 3(4), pp. 758-768. Wiley 10.1002/rth2.12238
Piezzi, Vanja; Wassilew, Nasstasja; Atkinson, Andrew; D'Incau, Stéphanie; Kaspar, Tanja; Seth-Smith, Helena MB; Casanova, Carlo; Bittel, Pascal; Jent, Philipp; Sommerstein, Rami; Buetti, Niccolò; Marschall, Jonas (2022). Nosocomial outbreak of vancomycin-resistant Enterococcus faecium (VRE) ST796, Switzerland, 2017 to 2020. Eurosurveillance, 27(48) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.48.2200285
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4 (2017) 519-521]. International journal of antimicrobial agents, 50(2), p. 276. Elsevier 10.1016/j.ijantimicag.2017.05.002
Frey, Pascal Marcel; Marti, Grischa Robert; Droz, Sara Christine; de Roche von Arx, Mirjam; Suter, Franziska Marta; Aujesky, Drahomir; Brugger, Silvio (2019). Bacterial colonization of handheld devices in a tertiary care setting: a hygiene intervention study. Antimicrobial Resistance and Infection Control, 8(97), p. 97. BioMed Central 10.1186/s13756-019-0546-y
Campos-Madueno, Edgar I; Aldeia, Claudia; Perreten, Vincent; Sendi, Parham; Moser, Aline I; Endimiani, Andrea (2023). Detection of blaCTX-M and blaDHA genes in stool samples of healthy people: comparison of culture- and shotgun metagenomic-based approaches. Frontiers in Microbiology, 14(1236208), p. 1236208. Frontiers 10.3389/fmicb.2023.1236208
Campos-Madueno, Edgar I; Aldeia, Claudia; Sendi, Parham; Endimiani, Andrea (2023). Escherichia ruysiae May Serve as a Reservoir of Antibiotic Resistance Genes across Multiple Settings and Regions. Microbiology spectrum, 11(4), e0175323. American Society for Microbiology 10.1128/spectrum.01753-23
Raemy, Samuel; Casanova, Carlo; Baldan, Rossella; Barreto, Erin; Tande, Aaron J; Endimiani, Andrea; Leib, Stephen L; Fischer, Urs; Sendi, Parham (2023). Penicillin-Susceptible Streptococcus pneumoniae Meningitis in Adults: Does the Ceftriaxone Dosing Matter? Antibiotics, 12(5) MDPI 10.3390/antibiotics12050878
Baldan, Rossella; Droz, Sara; Casanova, Carlo; Knabben, Laura; Huang, Dorothy J; Brülisauer, Christine; Kind, André B; Krause, Elke; Mauerer, Stefanie; Spellerberg, Barbara; Sendi, Parham (2021). Group B streptococcal colonization in elderly women. BMC infectious diseases, 21(1), p. 408. BioMed Central 10.1186/s12879-021-06102-x
Moser, Aline I.; Kuenzli, Esther; Büdel, Thomas; Campos-Madueno, Edgar I.; Bernasconi, Odette J.; DeCrom-Beer, Susan; Jakopp, Barbara; Mohammed, Ali Haji; Hassan, Nadir Khatib; Fehr, Jan; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2021). Travellers returning from the island of Zanzibar colonized with MDR Escherichia coli strains: assessing the impact of local people and other sources. The journal of antimicrobial chemotherapy, 76(2), pp. 330-337. Oxford University Press 10.1093/jac/dkaa457
Principe, Luigi; Bernasconi, Odette J.; Viaggi, Valentina; Campos-Madueno, Edgar I.; Endimiani, Andrea; Luzzaro, Francesco (2020). Emergence of Haemophilus parainfluenzae resistant to third-generation cephalosporins in Italy: potential role of PBP3 and PBP5 substitutions in high-level resistance. International journal of antimicrobial agents, 56(5), p. 106159. Elsevier 10.1016/j.ijantimicag.2020.106159
Endimiani, Andrea; Bernasconi, Odette Joëlle; Büdel, Thomas; Campos-Madueno, Edgar I.; Kuenzli, Esther; Hatz, Christoph; Carattoli, Alessandra (2020). Whole-genome characterization of a Shewanella algae strain co-harboring blaCTX-M-15 and armA genes on a novel IncC plasmid. Antimicrobial agents and chemotherapy, 64(5) American Society for Microbiology 10.1128/AAC.00267-20
Endimiani, Andrea; Brilhante, Michael; Bernasconi, Odette J.; Perreten, Vincent; Schmidt, Janne S; Dazio, Valentina; Nigg, Aurélien; Gobeli Brawand, Stefanie; Kuster, Stefan P; Schuller, Simone; Willi, Barbara (2020). Employees of Swiss veterinary clinics colonized with epidemic clones of carbapenemase-producing Escherichia coli. Journal of antimicrobial chemotherapy, 75(3), pp. 766-768. Oxford University Press 10.1093/jac/dkz470
Bernasconi, Odette J.; Campos-Madueno, Edgar I.; Donà, Valentina; Perreten, Vincent; Carattoli, Alessandra; Endimiani, Andrea (2020). Investigating the Use of Bacteriophages as New Decolonization Strategy for Intestinal Carriage of CTX-M-15-producing ST131 Escherichia coli: An In Vitro Continuous Culture System Model. Journal of global antimicrobial resistance, 22, pp. 664-671. Elsevier 10.1016/j.jgar.2020.05.018
Schmidt, Janne S.; Kuster, Stefan P.; Nigg, Aurélien; Dazio, Valentina; Brilhante, Michael; Rohrbach, Helene; Bernasconi, Odette J.; Büdel, Thomas; Campos-Madueno, Edgar I.; Gobeli Brawand, Stefanie; Schuller, Simone; Endimiani, Andrea; Perreten, Vincent; Willi, Barbara (2020). Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics. Antimicrobial resistance and infection control, 9(1) BioMed Central 10.1186/s13756-020-00742-5
Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20
Büdel, Thomas; Kuenzli, Esther; Clément, Mathieu; Bernasconi, Odette J.; Fehr, Jan; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2019). Polyclonal gut colonization with extended-spectrum cephalosporin- and/or colistin-resistant Enterobacteriaceae: a normal status for hotel employees on the island of Zanzibar, Tanzania. The journal of antimicrobial chemotherapy, 74(10), pp. 2880-2890. Oxford University Press 10.1093/jac/dkz296
Clément, Mathieu; Keller, Peter Michael; Bernasconi, Odette Joëlle; Stirnimann, Guido; Frey, Pascal M.; Bloemberg, Guido V.; Sendi, Parham; Endimiani, Andrea (2019). First Clinical Case of In Vivo Acquisition of DHA-1 plasmid-mediated AmpC in a Salmonella enterica subsp. enterica Isolate. Antimicrobial agents and chemotherapy, 63(10) American Society for Microbiology 10.1128/AAC.00992-19
Bernasconi, Odette Joëlle; Donà, Valentina; Tinguely, Regula; Endimiani, Andrea (2018). In Vitro Activity of 3 Commercial Bacteriophage Cocktails Against Salmonella and Shigella spp. Isolates of Human Origin. Pathogens and Immunity, 3(1), pp. 72-81. Case Western Reserve University, Cleveland, OH 10.20411/pai.v3i1.234
Clément, Mathieu; Büdel, Thomas; Bernasconi, Odette Joëlle; Principe, Luigi; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2018). The EDTA-based disk-combination tests are unreliable for the detection of MCR-mediated colistin-resistance in Enterobacteriaceae. Journal of microbiological methods, 153, pp. 31-34. Elsevier 10.1016/j.mimet.2018.08.008
Bernasconi, Odette Joëlle; Principe, Luigi; Tinguely, Regula; Karczmarek, Aneta; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2017). Evaluation of a New Commercial Microarray Platform for the Simultaneous Detection of β-Lactamase and Mcr-1/-2 Genes in Enterobacteriaceae. Journal of clinical microbiology, 55(10), pp. 3138-3141. American Society for Microbiology 10.1128/JCM.01056-17
Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4 (2017) 519-521]. International journal of antimicrobial agents, 50(2), p. 276. Elsevier 10.1016/j.ijantimicag.2017.05.002
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Kasraian Fard, Sara; Hilty, Markus; Perreten, Vincent; Endimiani, Andrea (2016). Intestinal colonisation with extended-spectrum cephalosporin-resistant Escherichia coli in Swiss pets: molecular features, risk factors and transmission with owners. International journal of antimicrobial agents, 48(6), pp. 759-760. Elsevier 10.1016/j.ijantimicag.2016.08.007
Bernasconi, Odette Joëlle; Kuenzli, Esther; Pires, João; Tinguely, Regula; Carattoli, Alessandra; Hatz, Christoph; Perreten, Vincent; Endimiani, Andrea (2016). Travelers Can Import Colistin-Resistant Enterobacteriaceae, Including Those Possessing the Plasmid-Mediated mcr-1 Gene. Antimicrobial agents and chemotherapy, 60(8), pp. 5080-5084. American Society for Microbiology 10.1128/AAC.00731-16
Piezzi, Vanja; Wassilew, Nasstasja; Atkinson, Andrew; D'Incau, Stéphanie; Kaspar, Tanja; Seth-Smith, Helena MB; Casanova, Carlo; Bittel, Pascal; Jent, Philipp; Sommerstein, Rami; Buetti, Niccolò; Marschall, Jonas (2022). Nosocomial outbreak of vancomycin-resistant Enterococcus faecium (VRE) ST796, Switzerland, 2017 to 2020. Eurosurveillance, 27(48) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.48.2200285
Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Calzavarini, Sara; Brodard, Justine; Quarroz, Claudia; Maire, Livia; Nützi, Raphael; Jankovic, Jovana; Rotondo, Laura C; Giabbani, Evelyne; Fiedler, Georg Martin; Nagler, Michael; Angelillo-Scherrer, Anne (2019). Thrombin generation measurement using the ST Genesia Thrombin Generation System in a cohort of healthy adults: Normal values and variability. Research and practice in thrombosis and haemostasis, 3(4), pp. 758-768. Wiley 10.1002/rth2.12238
Frey, Pascal Marcel; Marti, Grischa Robert; Droz, Sara Christine; de Roche von Arx, Mirjam; Suter, Franziska Marta; Aujesky, Drahomir; Brugger, Silvio (2019). Bacterial colonization of handheld devices in a tertiary care setting: a hygiene intervention study. Antimicrobial Resistance and Infection Control, 8(97), p. 97. BioMed Central 10.1186/s13756-019-0546-y
Werren, Joel P.; Troxler, Lukas J.; Oyewole, Oluwaseun Rume-Abiola; Ramette, Alban; Brugger, Silvio D.; Bruggmann, Rémy; van der Linden, Mark; Nahm, Moon H.; Gjuroski, Ilche; Casanova, Carlo; Furrer, Julien; Hilty, Markus (2021). Carbon Source-Dependent Changes of the Structure of Streptococcus pneumoniae Capsular Polysaccharide with Serotype 6F. International journal of molecular sciences, 22(9) MDPI 10.3390/ijms22094580
Brönnimann, Michael P.; Hirzberger, Lea; Keller, Peter M.; Gsell-Albert, Monika (2023). Antibacterial Effects of X-ray and MRI Contrast Media: An In Vitro Pilot Study. International journal of molecular sciences, 24(4), p. 3470. MDPI 10.3390/ijms24043470
Baldan, Rossella; Droz, Sara; Casanova, Carlo; Knabben, Laura; Huang, Dorothy J; Brülisauer, Christine; Kind, André B; Krause, Elke; Mauerer, Stefanie; Spellerberg, Barbara; Sendi, Parham (2021). Group B streptococcal colonization in elderly women. BMC infectious diseases, 21(1), p. 408. BioMed Central 10.1186/s12879-021-06102-x
Kuenzli, Andrea B.; Burri, Silvie; Casanova, Carlo; Sommerstein, Rami; Buetti, Niccolo; Seth-Smith, Helena Mb; Bodmer, Thomas; Egli, Adrian; Marschall, Jonas (2020). Successful Management of a Clostridioides difficile Ribotype 027 Outbreak with a Lean Intervention Bundle. The journal of hospital infection, 106(2), pp. 240-245. Elsevier 10.1016/j.jhin.2020.07.034
Wassilew, Nasstasja; Seth-Smith, Helena MB; Rolli, Eveline; Fietze, Yvonne; Casanova, Carlo; Führer, Urs; Egli, Adrian; Marschall, Jonas; Buetti, Niccolò Ivo Marco-Aurelio (2018). Outbreak of vancomycin-resistant Enterococcus faecium clone ST796, Switzerland, December 2017 to April 2018. Eurosurveillance, 23(29) European Centre for Disease Prevention and Control 10.2807/1560-7917.es.2018.23.29.1800351
Kuenzli, Andrea B.; Burri, Silvie; Casanova, Carlo; Sommerstein, Rami; Buetti, Niccolo; Seth-Smith, Helena Mb; Bodmer, Thomas; Egli, Adrian; Marschall, Jonas (2020). Successful Management of a Clostridioides difficile Ribotype 027 Outbreak with a Lean Intervention Bundle. The journal of hospital infection, 106(2), pp. 240-245. Elsevier 10.1016/j.jhin.2020.07.034
Bächli, Magi; Sommerstein, Rami; Casanova, Carlo; Droz, Sara; Küffer, Marianne; Marschall, Jonas (2022). Meticillin-resistant Staphylococcus aureus Contact Screening Strategy in a Low Prevalence Setting; a Nested Case-Control Study. Infection prevention in practice, 4(2), p. 100211. Elsevier 10.1016/j.infpip.2022.100211
Moser, Aline I.; Kuenzli, Esther; Büdel, Thomas; Campos-Madueno, Edgar I.; Bernasconi, Odette J.; DeCrom-Beer, Susan; Jakopp, Barbara; Mohammed, Ali Haji; Hassan, Nadir Khatib; Fehr, Jan; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2021). Travellers returning from the island of Zanzibar colonized with MDR Escherichia coli strains: assessing the impact of local people and other sources. The journal of antimicrobial chemotherapy, 76(2), pp. 330-337. Oxford University Press 10.1093/jac/dkaa457
Moser, Aline I.; Kuenzli, Esther; Campos-Madueno, Edgar I.; Büdel, Thomas; Rattanavong, Sayaphet; Vongsouvath, Manivanh; Hatz, Christoph; Endimiani, Andrea (2021). Antimicrobial-Resistant Escherichia coli Strains and Their Plasmids in People, Poultry, and Chicken Meat in Laos. Frontiers in Microbiology, 12 Frontiers 10.3389/fmicb.2021.708182
Büdel, Thomas; Kuenzli, Esther; Campos-Madueno, Edgar I; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2020). On the island of Zanzibar people in the community are frequently colonized with the same MDR Enterobacterales found in poultry and retailed chicken meat. The journal of antimicrobial chemotherapy, 75(9), pp. 2432-2441. Oxford University Press 10.1093/jac/dkaa198
Endimiani, Andrea; Bernasconi, Odette Joëlle; Büdel, Thomas; Campos-Madueno, Edgar I.; Kuenzli, Esther; Hatz, Christoph; Carattoli, Alessandra (2020). Whole-genome characterization of a Shewanella algae strain co-harboring blaCTX-M-15 and armA genes on a novel IncC plasmid. Antimicrobial agents and chemotherapy, 64(5) American Society for Microbiology 10.1128/AAC.00267-20
Schmidt, Janne S.; Kuster, Stefan P.; Nigg, Aurélien; Dazio, Valentina; Brilhante, Michael; Rohrbach, Helene; Bernasconi, Odette J.; Büdel, Thomas; Campos-Madueno, Edgar I.; Gobeli Brawand, Stefanie; Schuller, Simone; Endimiani, Andrea; Perreten, Vincent; Willi, Barbara (2020). Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics. Antimicrobial resistance and infection control, 9(1) BioMed Central 10.1186/s13756-020-00742-5
Büdel, Thomas; Kuenzli, Esther; Clément, Mathieu; Bernasconi, Odette J.; Fehr, Jan; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2019). Polyclonal gut colonization with extended-spectrum cephalosporin- and/or colistin-resistant Enterobacteriaceae: a normal status for hotel employees on the island of Zanzibar, Tanzania. The journal of antimicrobial chemotherapy, 74(10), pp. 2880-2890. Oxford University Press 10.1093/jac/dkz296
Clément, Mathieu; Büdel, Thomas; Bernasconi, Odette Joëlle; Principe, Luigi; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2018). The EDTA-based disk-combination tests are unreliable for the detection of MCR-mediated colistin-resistance in Enterobacteriaceae. Journal of microbiological methods, 153, pp. 31-34. Elsevier 10.1016/j.mimet.2018.08.008
Calzavarini, Sara; Brodard, Justine; Quarroz, Claudia; Maire, Livia; Nützi, Raphael; Jankovic, Jovana; Rotondo, Laura C; Giabbani, Evelyne; Fiedler, Georg Martin; Nagler, Michael; Angelillo-Scherrer, Anne (2019). Thrombin generation measurement using the ST Genesia Thrombin Generation System in a cohort of healthy adults: Normal values and variability. Research and practice in thrombosis and haemostasis, 3(4), pp. 758-768. Wiley 10.1002/rth2.12238
Pitton, Melissa; Valente, Luca G; Oberhaensli, Simone; Casanova, Carlo; Sendi, Parham; Schnegg, Bruno; Jakob, Stephan M; Cameron, David R; Que, Yok-Ai; Fürholz, Monika (2023). Dynamics of bacterial pathogens at the driveline exit site in patients with ventricular assist devices: a prospective, observational, single-centre cohort study. The Journal of heart and lung transplantation, 42(10), pp. 1445-1454. Elsevier 10.1016/j.healun.2023.05.016
Campos-Madueno, Edgar I; Aldeia, Claudia; Perreten, Vincent; Sendi, Parham; Moser, Aline I; Endimiani, Andrea (2023). Detection of blaCTX-M and blaDHA genes in stool samples of healthy people: comparison of culture- and shotgun metagenomic-based approaches. Frontiers in Microbiology, 14(1236208), p. 1236208. Frontiers 10.3389/fmicb.2023.1236208
Campos-Madueno, Edgar I; Aldeia, Claudia; Sendi, Parham; Endimiani, Andrea (2023). Escherichia ruysiae May Serve as a Reservoir of Antibiotic Resistance Genes across Multiple Settings and Regions. Microbiology spectrum, 11(4), e0175323. American Society for Microbiology 10.1128/spectrum.01753-23
Moser, Aline I; Campos-Madueno, Edgar I; Perreten, Vincent; Endimiani, Andrea (2022). Genome stability during serial sub-culturing in hyperepidemic multidrug-resistant Klebsiella pneumoniae and Escherichia coli. Journal of global antimicrobial resistance, 31, pp. 152-161. Elsevier 10.1016/j.jgar.2022.08.014
Moser, Aline I.; Campos-Madueno, Edgar I.; Sendi, Parham; Perreten, Vincent; Keller, Peter M.; Ramette, Alban; Endimiani, Andrea (2021). Repatriation of a patient with COVID-19 contributed to the importation of an emerging carbapenemase producer. Journal of global antimicrobial resistance, 27, pp. 267-272. Elsevier 10.1016/j.jgar.2021.10.012
Campos-Madueno, Edgar I.; Moser, Aline I.; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Exploring the global spread of Klebsiella grimontii isolates possessing blaVIM-1 and mcr-9. Antimicrobial agents and chemotherapy, 65(9), e0072421. American Society for Microbiology 10.1128/AAC.00724-21
Moser, Aline; Campos-Madueno, Edgar Igor; Keller, Peter Michael; Endimiani, Andrea (2021). Complete Genome Sequence of a Third- and Fourth-Generation Cephalosporin-Resistant Comamonas kerstersii Isolate. Microbiology resource announcements, 10(28), e0039121. American Society for Microbiology 10.1128/MRA.00391-21
Campos-Madueno, Edgar I.; Sigrist, Thomas; Flückiger, Ursula M.; Risch, Lorenz; Bodmer, Thomas; Endimiani, Andrea (2021). First report of a blaVIM-1 metallo-β-lactamase-possessing Klebsiella michiganensis. Journal of global antimicrobial resistance, 25, pp. 310-314. Elsevier 10.1016/j.jgar.2021.03.027
Moser, Aline I.; Kuenzli, Esther; Büdel, Thomas; Campos-Madueno, Edgar I.; Bernasconi, Odette J.; DeCrom-Beer, Susan; Jakopp, Barbara; Mohammed, Ali Haji; Hassan, Nadir Khatib; Fehr, Jan; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2021). Travellers returning from the island of Zanzibar colonized with MDR Escherichia coli strains: assessing the impact of local people and other sources. The journal of antimicrobial chemotherapy, 76(2), pp. 330-337. Oxford University Press 10.1093/jac/dkaa457
Campos-Madueno, Edgar I.; Gmuer, Christian; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Characterization of a new blaVIM-1-carrying IncN2 plasmid from an Enterobacter hormaechei subsp. steigerwaltii. Journal of global antimicrobial resistance, 24, pp. 325-327. Elsevier 10.1016/j.jgar.2021.01.017
Moser, Aline I.; Kuenzli, Esther; Campos-Madueno, Edgar I.; Büdel, Thomas; Rattanavong, Sayaphet; Vongsouvath, Manivanh; Hatz, Christoph; Endimiani, Andrea (2021). Antimicrobial-Resistant Escherichia coli Strains and Their Plasmids in People, Poultry, and Chicken Meat in Laos. Frontiers in Microbiology, 12 Frontiers 10.3389/fmicb.2021.708182
Moser, Aline I.; Keller, Peter M.; Campos-Madueno, Edgar I.; Poirel, Laurent; Nordmann, Patrice; Endimiani, Andrea (2021). A Patient With Multiple Carbapenemase Producers Including an Unusual Citrobacter sedlakii Hosting an IncC blaNDM-1- and armA-carrying Plasmid. Pathogens and Immunity, 6(2), pp. 119-134. Case Western Reserve University, Cleveland, OH 10.20411/pai.v6i2.482
Principe, Luigi; Bernasconi, Odette J.; Viaggi, Valentina; Campos-Madueno, Edgar I.; Endimiani, Andrea; Luzzaro, Francesco (2020). Emergence of Haemophilus parainfluenzae resistant to third-generation cephalosporins in Italy: potential role of PBP3 and PBP5 substitutions in high-level resistance. International journal of antimicrobial agents, 56(5), p. 106159. Elsevier 10.1016/j.ijantimicag.2020.106159
Büdel, Thomas; Kuenzli, Esther; Campos-Madueno, Edgar I; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2020). On the island of Zanzibar people in the community are frequently colonized with the same MDR Enterobacterales found in poultry and retailed chicken meat. The journal of antimicrobial chemotherapy, 75(9), pp. 2432-2441. Oxford University Press 10.1093/jac/dkaa198
Endimiani, Andrea; Bernasconi, Odette Joëlle; Büdel, Thomas; Campos-Madueno, Edgar I.; Kuenzli, Esther; Hatz, Christoph; Carattoli, Alessandra (2020). Whole-genome characterization of a Shewanella algae strain co-harboring blaCTX-M-15 and armA genes on a novel IncC plasmid. Antimicrobial agents and chemotherapy, 64(5) American Society for Microbiology 10.1128/AAC.00267-20
Bernasconi, Odette J.; Campos-Madueno, Edgar I.; Donà, Valentina; Perreten, Vincent; Carattoli, Alessandra; Endimiani, Andrea (2020). Investigating the Use of Bacteriophages as New Decolonization Strategy for Intestinal Carriage of CTX-M-15-producing ST131 Escherichia coli: An In Vitro Continuous Culture System Model. Journal of global antimicrobial resistance, 22, pp. 664-671. Elsevier 10.1016/j.jgar.2020.05.018
Schmidt, Janne S.; Kuster, Stefan P.; Nigg, Aurélien; Dazio, Valentina; Brilhante, Michael; Rohrbach, Helene; Bernasconi, Odette J.; Büdel, Thomas; Campos-Madueno, Edgar I.; Gobeli Brawand, Stefanie; Schuller, Simone; Endimiani, Andrea; Perreten, Vincent; Willi, Barbara (2020). Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics. Antimicrobial resistance and infection control, 9(1) BioMed Central 10.1186/s13756-020-00742-5
Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20
Kröll, Dino; Erdem, Suna; Noser, L; Arnold, D; Storni, Federico Lorenzo; Dislich, Bastian; Langer, D; Candinas, Daniel; Seiler, Christian A. (June 2016). Evolving concepts and outcome in esophageal cancer surgery- a single center experience from the past to present (Unpublished). In: Jahreskongress der Schweizerischen Gesellschaft für Chirurgie. Lugano. 01.-03.06.2016.
European Patent Office (2020). Conjugative vectors selectable by fructooligosaccharides (3541942)
Bernasconi, Odette Joëlle; Kuenzli, Esther; Pires, João; Tinguely, Regula; Carattoli, Alessandra; Hatz, Christoph; Perreten, Vincent; Endimiani, Andrea (2016). Travelers Can Import Colistin-Resistant Enterobacteriaceae, Including Those Possessing the Plasmid-Mediated mcr-1 Gene. Antimicrobial agents and chemotherapy, 60(8), pp. 5080-5084. American Society for Microbiology 10.1128/AAC.00731-16
Seiffert, Salome Nadja; Carattoli, Alessandra; Tinguely, Regula; Lupo, Agnese; Perreten, Vincent; Endimiani, Andrea (2014). High Prevalence of Extended-Spectrum β-Lactamase, Plasmid-Mediated AmpC and Carbapenemase genes in Food for Pets. Antimicrobial agents and chemotherapy, 58(10), pp. 6320-6323. American Society for Microbiology 10.1128/AAC.03185-14
Pitton, Melissa; Valente, Luca G; Oberhaensli, Simone; Casanova, Carlo; Sendi, Parham; Schnegg, Bruno; Jakob, Stephan M; Cameron, David R; Que, Yok-Ai; Fürholz, Monika (2023). Dynamics of bacterial pathogens at the driveline exit site in patients with ventricular assist devices: a prospective, observational, single-centre cohort study. The Journal of heart and lung transplantation, 42(10), pp. 1445-1454. Elsevier 10.1016/j.healun.2023.05.016
Raemy, Samuel; Casanova, Carlo; Baldan, Rossella; Barreto, Erin; Tande, Aaron J; Endimiani, Andrea; Leib, Stephen L; Fischer, Urs; Sendi, Parham (2023). Penicillin-Susceptible Streptococcus pneumoniae Meningitis in Adults: Does the Ceftriaxone Dosing Matter? Antibiotics, 12(5) MDPI 10.3390/antibiotics12050878
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Piezzi, Vanja; Wassilew, Nasstasja; Atkinson, Andrew; D'Incau, Stéphanie; Kaspar, Tanja; Seth-Smith, Helena MB; Casanova, Carlo; Bittel, Pascal; Jent, Philipp; Sommerstein, Rami; Buetti, Niccolò; Marschall, Jonas (2022). Nosocomial outbreak of vancomycin-resistant Enterococcus faecium (VRE) ST796, Switzerland, 2017 to 2020. Eurosurveillance, 27(48) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.48.2200285
Bächli, Magi; Sommerstein, Rami; Casanova, Carlo; Droz, Sara; Küffer, Marianne; Marschall, Jonas (2022). Meticillin-resistant Staphylococcus aureus Contact Screening Strategy in a Low Prevalence Setting; a Nested Case-Control Study. Infection prevention in practice, 4(2), p. 100211. Elsevier 10.1016/j.infpip.2022.100211
Casanova, Carlo; Küffer, Marianne; Leib, Stephen L.; Hilty, Markus (2021). Re-emergence of invasive pneumococcal disease (IPD) and increase of serotype 23B after easing of COVID-19 measures, Switzerland, 2021. Emerging microbes & infections, 10(1), pp. 2202-2204. Taylor & Francis 10.1080/22221751.2021.2000892
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Seth-Smith, Helena M B; Biggel, Michael; Roloff, Tim; Hinic, Vladimira; Bodmer, Thomas; Risch, Martin; Casanova, Carlo; Widmer, Andreas; Sommerstein, Rami; Marschall, Jonas; Tschudin-Sutter, Sarah; Egli, Adrian (2021). Transition From PCR-Ribotyping to Whole Genome Sequencing Based Typing of Clostridioides difficile. Frontiers in cellular and infection microbiology, 11, p. 681518. Frontiers 10.3389/fcimb.2021.681518
Brueggemann, Angela B; Jansen van Rensburg, Melissa J; Shaw, David; McCarthy, Noel D; Jolley, Keith A; Maiden, Martin C J; van der Linden, Mark P G; Amin-Chowdhury, Zahin; Bennett, Désirée E; Borrow, Ray; Brandileone, Maria-Cristina C; Broughton, Karen; Campbell, Ruth; Cao, Bin; Casanova, Carlo; Choi, Eun Hwa; Chu, Yiu Wai; Clark, Stephen A; Claus, Heike; Coelho, Juliana; ... (2021). Changes in the incidence of invasive disease due to Streptococcus pneumoniae, Haemophilus influenzae, and Neisseria meningitidis during the COVID-19 pandemic in 26 countries and territories in the Invasive Respiratory Infection Surveillance Initiative: a prospective analysis of surveillance data. The Lancet. Digital health, 3(6), e360-e370. Elsevier 10.1016/S2589-7500(21)00077-7
Oyewole, Oluwaseun Rume-Abiola; Lang, Phung; Albrich, Werner C.; Wissel, Kerstin; Leib, Stephen L.; Casanova, Carlo; Hilty, Markus (2021). The Impact of Pneumococcal Conjugate Vaccine (PCV) Coverage Heterogeneities on the Changing Epidemiology of Invasive Pneumococcal Disease in Switzerland, 2005–2019. Microorganisms, 9(5) MDPI 10.3390/microorganisms9051078
Baldan, Rossella; Droz, Sara; Casanova, Carlo; Knabben, Laura; Huang, Dorothy J; Brülisauer, Christine; Kind, André B; Krause, Elke; Mauerer, Stefanie; Spellerberg, Barbara; Sendi, Parham (2021). Group B streptococcal colonization in elderly women. BMC infectious diseases, 21(1), p. 408. BioMed Central 10.1186/s12879-021-06102-x
Werren, Joel P.; Troxler, Lukas J.; Oyewole, Oluwaseun Rume-Abiola; Ramette, Alban; Brugger, Silvio D.; Bruggmann, Rémy; van der Linden, Mark; Nahm, Moon H.; Gjuroski, Ilche; Casanova, Carlo; Furrer, Julien; Hilty, Markus (2021). Carbon Source-Dependent Changes of the Structure of Streptococcus pneumoniae Capsular Polysaccharide with Serotype 6F. International journal of molecular sciences, 22(9) MDPI 10.3390/ijms22094580
Kuenzli, Andrea B.; Burri, Silvie; Casanova, Carlo; Sommerstein, Rami; Buetti, Niccolo; Seth-Smith, Helena Mb; Bodmer, Thomas; Egli, Adrian; Marschall, Jonas (2020). Successful Management of a Clostridioides difficile Ribotype 027 Outbreak with a Lean Intervention Bundle. The journal of hospital infection, 106(2), pp. 240-245. Elsevier 10.1016/j.jhin.2020.07.034
Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Seth-Smith, Helena M B; Casanova, Carlo; Sommerstein, Rami; Meinel, Dominik M; Abdelbary, Mohamed M H; Blanc, Dominique S; Droz, Sara; Führer, Urs; Lienhard, Reto; Lang, Claudia; Dubuis, Olivier; Schlegel, Matthias; Widmer, Andreas; Keller, Peter Markus; Marschall, Jonas; Egli, Adrian (2019). Phenotypic and Genomic Analyses of Burkholderia stabilis Clinical Contamination, Switzerland. Emerging infectious diseases, 25(6), pp. 1084-1092. U.S. National Center for Infectious Diseases 10.3201/eid2506.172119
Tagini, Florian; Aeby, Sébastien; Bertelli, Claire; Droz, Sara; Casanova, Carlo; Prod'hom, Guy; Jaton, Katia; Greub, Gilbert (2019). Phylogenomics reveal that Mycobacterium kansasii subtypes are species-level lineages. Description of Mycobacterium pseudokansasii sp. nov., Mycobacterium innocens sp. nov. and Mycobacterium attenuatum sp. nov. International journal of systematic and evolutionary microbiology, 69(6), pp. 1696-1704. Society for General Microbiology SGM 10.1099/ijsem.0.003378
Casanova, Carlo; Lo Priore, Elia; Egli, Adrian; Seth-Smith, Helena M B; Räber, Lorenz; Ott, Daniel; Pflüger, Valentin; Droz, Sara Christine; Marschall, Jonas; Sommerstein, Rami (2019). Agrobacterium spp. nosocomial outbreak assessment using rapid MALDI-TOF MS based typing, confirmed by whole genome sequencing. Antimicrobial resistance and infection control, 8, p. 171. BioMed Central 10.1186/s13756-019-0619-y
Seth-Smith, Helena M B; Imkamp, Frank; Tagini, Florian; Cuénod, Aline; Hömke, Rico; Jahn, Kathleen; Tschacher, Anne; Grendelmeier, Peter; Bättig, Veronika; Erb, Stefan; Reinhard, Miriam; Rütimann, Gottfried; Borrell, Sonia; Gagneux, Sebastien; Casanova, Carlo; Droz, Sara; Osthoff, Michael; Tamm, Michael; Nübel, Ulrich; Greub, Gilbert; ... (2019). Discovery and Characterization of Mycobacterium basiliense sp. nov., a Nontuberculous Mycobacterium Isolated From Human Lungs. Frontiers in Microbiology, 9(3184), p. 3184. Frontiers 10.3389/fmicb.2018.03184
Wassilew, Nasstasja; Seth-Smith, Helena MB; Rolli, Eveline; Fietze, Yvonne; Casanova, Carlo; Führer, Urs; Egli, Adrian; Marschall, Jonas; Buetti, Niccolò Ivo Marco-Aurelio (2018). Outbreak of vancomycin-resistant Enterococcus faecium clone ST796, Switzerland, December 2017 to April 2018. Eurosurveillance, 23(29) European Centre for Disease Prevention and Control 10.2807/1560-7917.es.2018.23.29.1800351
Sommerstein, Rami; Führer, Urs; Lo Priore, Elia Francesco; Casanova, Carlo; Meinel, Dominik M; Seth-Smith, Helena Mb; Kronenberg, Andreas Oskar; Koch, Daniel; Senn, Laurence; Widmer, Andreas F; Egli, Adrian; Marschall, Jonas (2017). Burkholderia stabilis outbreak associated with contaminated commercially-available washing gloves, Switzerland, May 2015 to August 2016. Eurosurveillance, 22(49) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2017.22.49.17-00213
Ruppen, Corinne; Rasmussen, Magnus; Casanova, Carlo; Sendi, Parham (2017). A 10-year observational study of Streptococcus dysgalactiae bacteraemia in adults: frequent occurrence among female intravenous drug users. Swiss medical weekly, 147(w14469), w14469. EMH Schweizerischer Ärzteverlag 10.4414/smw.2017.14469
Zbinden, Andrea; Seth-Smith, Helena M B; Beltrami, Vanessa; Mancini, Stefano; Droz, Sara; Bürgi, Urs; Melillo, David; Schuurmans, Mace M; Schwizer, Bernhard; Schmid, Iris; Casaulta, Carmen; Barben, Jürg; Mueller, Nicolas J; Imkamp, Frank (2024). Burkholderia cenocepacia ST-250 in cystic fibrosis patients in Switzerland: Genomic investigation of transmission routes. Diagnostic microbiology and infectious disease, 110(2), p. 116429. Elsevier 10.1016/j.diagmicrobio.2024.116429
Büdel, Thomas; Kuenzli, Esther; Clément, Mathieu; Bernasconi, Odette J.; Fehr, Jan; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2019). Polyclonal gut colonization with extended-spectrum cephalosporin- and/or colistin-resistant Enterobacteriaceae: a normal status for hotel employees on the island of Zanzibar, Tanzania. The journal of antimicrobial chemotherapy, 74(10), pp. 2880-2890. Oxford University Press 10.1093/jac/dkz296
Clément, Mathieu; Keller, Peter Michael; Bernasconi, Odette Joëlle; Stirnimann, Guido; Frey, Pascal M.; Bloemberg, Guido V.; Sendi, Parham; Endimiani, Andrea (2019). First Clinical Case of In Vivo Acquisition of DHA-1 plasmid-mediated AmpC in a Salmonella enterica subsp. enterica Isolate. Antimicrobial agents and chemotherapy, 63(10) American Society for Microbiology 10.1128/AAC.00992-19
Clément, Mathieu; Büdel, Thomas; Bernasconi, Odette Joëlle; Principe, Luigi; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2018). The EDTA-based disk-combination tests are unreliable for the detection of MCR-mediated colistin-resistance in Enterobacteriaceae. Journal of microbiological methods, 153, pp. 31-34. Elsevier 10.1016/j.mimet.2018.08.008
Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17
Pires, João; Siriwardena, Thissa N.; Stach, Michaela; Tinguely, Regula; Kasraian Fard, Sara; Luzzaro, Francesco; Leib, Stephen; Darbre, Tamis; Reymond, Jean-Louis; Endimiani, Andrea (2015). In Vitro Activity of the Novel Antimicrobial Peptide Dendrimer G3KL against Multidrug-Resistant Acinetobacter baumannii and Pseudomonas aeruginosa. Antimicrobial agents and chemotherapy, 59(12), pp. 7915-7918. American Society for Microbiology 10.1128/AAC.01853-15
Endimiani, Andrea; Brilhante, Michael; Bernasconi, Odette J.; Perreten, Vincent; Schmidt, Janne S; Dazio, Valentina; Nigg, Aurélien; Gobeli Brawand, Stefanie; Kuster, Stefan P; Schuller, Simone; Willi, Barbara (2020). Employees of Swiss veterinary clinics colonized with epidemic clones of carbapenemase-producing Escherichia coli. Journal of antimicrobial chemotherapy, 75(3), pp. 766-768. Oxford University Press 10.1093/jac/dkz470
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Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337
Bernasconi, Odette Joëlle; Donà, Valentina; Tinguely, Regula; Endimiani, Andrea (2018). In Vitro Activity of 3 Commercial Bacteriophage Cocktails Against Salmonella and Shigella spp. Isolates of Human Origin. Pathogens and Immunity, 3(1), pp. 72-81. Case Western Reserve University, Cleveland, OH 10.20411/pai.v3i1.234
Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4 (2017) 519-521]. International journal of antimicrobial agents, 50(2), p. 276. Elsevier 10.1016/j.ijantimicag.2017.05.002
Zbinden, Andrea; Seth-Smith, Helena M B; Beltrami, Vanessa; Mancini, Stefano; Droz, Sara; Bürgi, Urs; Melillo, David; Schuurmans, Mace M; Schwizer, Bernhard; Schmid, Iris; Casaulta, Carmen; Barben, Jürg; Mueller, Nicolas J; Imkamp, Frank (2024). Burkholderia cenocepacia ST-250 in cystic fibrosis patients in Switzerland: Genomic investigation of transmission routes. Diagnostic microbiology and infectious disease, 110(2), p. 116429. Elsevier 10.1016/j.diagmicrobio.2024.116429
Kofler, Jacob; Ramette, Alban; Iseli, Patricia; Stauber, Lea; Fichtner, Jens; Droz, Sara; Zihler Berner, Annina; Meier, Anna Bettina; Begert, Michelle; Negri, Sabine; Jachmann, Anne; Keller, Peter Michael; Staehelin, Cornelia; Grützmacher, Barbara (2022). Ongoing toxin-positive diphtheria outbreaks in a federal asylum centre in Switzerland, analysis July to September 2022. Eurosurveillance, 27(44) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.44.2200811
Bächli, Magi; Sommerstein, Rami; Casanova, Carlo; Droz, Sara; Küffer, Marianne; Marschall, Jonas (2022). Meticillin-resistant Staphylococcus aureus Contact Screening Strategy in a Low Prevalence Setting; a Nested Case-Control Study. Infection prevention in practice, 4(2), p. 100211. Elsevier 10.1016/j.infpip.2022.100211
Baldan, Rossella; Droz, Sara; Casanova, Carlo; Knabben, Laura; Huang, Dorothy J; Brülisauer, Christine; Kind, André B; Krause, Elke; Mauerer, Stefanie; Spellerberg, Barbara; Sendi, Parham (2021). Group B streptococcal colonization in elderly women. BMC infectious diseases, 21(1), p. 408. BioMed Central 10.1186/s12879-021-06102-x
Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Tagini, Florian; Aeby, Sébastien; Bertelli, Claire; Droz, Sara; Casanova, Carlo; Prod'hom, Guy; Jaton, Katia; Greub, Gilbert (2019). Phylogenomics reveal that Mycobacterium kansasii subtypes are species-level lineages. Description of Mycobacterium pseudokansasii sp. nov., Mycobacterium innocens sp. nov. and Mycobacterium attenuatum sp. nov. International journal of systematic and evolutionary microbiology, 69(6), pp. 1696-1704. Society for General Microbiology SGM 10.1099/ijsem.0.003378
Bograd, Alexandra; Seiler, Günter Theodor Michael; Droz, Sara Christine; Zimmerli, Stefan; Früh Epstein, Beatrice; Tappeiner, Christoph (2019). Bacterial and Fungal Keratitis: A Retrospective Analysis at a University Hospital in Switzerland. Klinische Monatsblätter für Augenheilkunde, 236(4), pp. 358-365. Thieme 10.1055/a-0774-7756
Frey, Pascal Marcel; Marti, Grischa Robert; Droz, Sara Christine; de Roche von Arx, Mirjam; Suter, Franziska Marta; Aujesky, Drahomir; Brugger, Silvio (2019). Bacterial colonization of handheld devices in a tertiary care setting: a hygiene intervention study. Antimicrobial Resistance and Infection Control, 8(97), p. 97. BioMed Central 10.1186/s13756-019-0546-y
Casanova, Carlo; Lo Priore, Elia; Egli, Adrian; Seth-Smith, Helena M B; Räber, Lorenz; Ott, Daniel; Pflüger, Valentin; Droz, Sara Christine; Marschall, Jonas; Sommerstein, Rami (2019). Agrobacterium spp. nosocomial outbreak assessment using rapid MALDI-TOF MS based typing, confirmed by whole genome sequencing. Antimicrobial resistance and infection control, 8, p. 171. BioMed Central 10.1186/s13756-019-0619-y
Seth-Smith, Helena M B; Imkamp, Frank; Tagini, Florian; Cuénod, Aline; Hömke, Rico; Jahn, Kathleen; Tschacher, Anne; Grendelmeier, Peter; Bättig, Veronika; Erb, Stefan; Reinhard, Miriam; Rütimann, Gottfried; Borrell, Sonia; Gagneux, Sebastien; Casanova, Carlo; Droz, Sara; Osthoff, Michael; Tamm, Michael; Nübel, Ulrich; Greub, Gilbert; ... (2019). Discovery and Characterization of Mycobacterium basiliense sp. nov., a Nontuberculous Mycobacterium Isolated From Human Lungs. Frontiers in Microbiology, 9(3184), p. 3184. Frontiers 10.3389/fmicb.2018.03184
Brown-Elliott, Barbara A; Simmer, Patricia J; Trovato, Alberto; Hyle, Emily P; Droz, Sara Christine; Buckwalter, Seanne P; Borroni, Emanuele; Branda, John A; Iana, Elkina; Mariottini, Alessandro; Nelson, Jameelah; Matteelli, Alberto; Toney, Nadege C; Scarparo, Claudio; de Man, Tom J B; Vasireddy, Ravikiran; Gandhi, Rajesh T; Wengenack, Nancy L; Cirillo, Daniela M; Wallace, Richard J; ... (2018). Mycobacterium decipiens sp. nov., a new species closely related to the Mycobacterium tuberculosis complex. International journal of systematic and evolutionary microbiology, 68(11), pp. 3557-3562. Society for General Microbiology SGM 10.1099/ijsem.0.003031
Hashemi Shahraki, Abdolrazagh; Trovato, Alberto; Droz, Sara; Haidarieh, Parvin; Borroni, Emanuele; Mirsaeidi, Mehdi; Mannino, Roberta; Hashemzadeh, Mohamad; Mariottini, Alessandro; Cirillo, Daniela Maria; Tortoli, Enrico (2017). Mycobacterium aquaticum sp. nov., a rapidly growing species isolated from haemodialysis water. International journal of systematic and evolutionary microbiology, 67(9), pp. 3279-3282. Society for General Microbiology SGM 10.1099/ijsem.0.002103
Reichmuth, Martina L.; Hömke, Rico; Zürcher, Kathrin; Sander, Peter; Avihingsanon, Anchalee; Collantes, Jimena; Loiseau, Chloé; Borrell, Sonia; Reinhard, Miriam; Wilkinson, Robert J; Yotebieng, Marcel; Fenner, Lukas; Böttger, Erik C; Gagneux, Sebastien; Egger, Matthias; Keller, Peter Michael (2020). Natural Polymorphisms in Mycobacterium tuberculosis Conferring Resistance to Delamanid in Drug-naïve Patients. Antimicrobial agents and chemotherapy, 64(11), e00513-20. American Society for Microbiology 10.1128/AAC.00513-20
Müller, Martin; Sägesser, Nadine; Keller, Peter M; Arampatzis, Spyridon; Steffens, Benedict; Ehrhard, Simone; Leichtle, Alexander B (2022). Urine Flow Cytometry Parameter Cannot Safely Predict Contamination of Urine-A Cohort Study of a Swiss Emergency Department Using Machine Learning Techniques. Diagnostics, 12(4) MDPI 10.3390/diagnostics12041008
Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337
Campos-Madueno, Edgar I; Aldeia, Claudia; Perreten, Vincent; Sendi, Parham; Moser, Aline I; Endimiani, Andrea (2023). Detection of blaCTX-M and blaDHA genes in stool samples of healthy people: comparison of culture- and shotgun metagenomic-based approaches. Frontiers in Microbiology, 14(1236208), p. 1236208. Frontiers 10.3389/fmicb.2023.1236208
Campos-Madueno, Edgar I; Aldeia, Claudia; Sendi, Parham; Endimiani, Andrea (2023). Escherichia ruysiae May Serve as a Reservoir of Antibiotic Resistance Genes across Multiple Settings and Regions. Microbiology spectrum, 11(4), e0175323. American Society for Microbiology 10.1128/spectrum.01753-23
Raemy, Samuel; Casanova, Carlo; Baldan, Rossella; Barreto, Erin; Tande, Aaron J; Endimiani, Andrea; Leib, Stephen L; Fischer, Urs; Sendi, Parham (2023). Penicillin-Susceptible Streptococcus pneumoniae Meningitis in Adults: Does the Ceftriaxone Dosing Matter? Antibiotics, 12(5) MDPI 10.3390/antibiotics12050878
Moser, Aline I; Campos-Madueno, Edgar I; Perreten, Vincent; Endimiani, Andrea (2022). Genome stability during serial sub-culturing in hyperepidemic multidrug-resistant Klebsiella pneumoniae and Escherichia coli. Journal of global antimicrobial resistance, 31, pp. 152-161. Elsevier 10.1016/j.jgar.2022.08.014
Endimiani, Andrea (30 August 2022). Control points to reduce spread of antibiotic resistance: a One-Health approach (Unpublished). In: Annual Congress Swiss Society for Microbiology (SSM). 30.08.22-01.09.22.
Moser, Aline I.; Campos-Madueno, Edgar I.; Sendi, Parham; Perreten, Vincent; Keller, Peter M.; Ramette, Alban; Endimiani, Andrea (2021). Repatriation of a patient with COVID-19 contributed to the importation of an emerging carbapenemase producer. Journal of global antimicrobial resistance, 27, pp. 267-272. Elsevier 10.1016/j.jgar.2021.10.012
Campos-Madueno, Edgar I.; Moser, Aline I.; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Exploring the global spread of Klebsiella grimontii isolates possessing blaVIM-1 and mcr-9. Antimicrobial agents and chemotherapy, 65(9), e0072421. American Society for Microbiology 10.1128/AAC.00724-21
Moser, Aline; Campos-Madueno, Edgar Igor; Keller, Peter Michael; Endimiani, Andrea (2021). Complete Genome Sequence of a Third- and Fourth-Generation Cephalosporin-Resistant Comamonas kerstersii Isolate. Microbiology resource announcements, 10(28), e0039121. American Society for Microbiology 10.1128/MRA.00391-21
Moser, Aline I.; Viaggi, Valentina; Mauri, Carola; Carattoli, Alessandra; Luzzaro, Francesco; Endimiani, Andrea (2021). An XDR Proteus vulgaris isolate hosting a novel blaNDM-1- and armA-carrying plasmid. The journal of antimicrobial chemotherapy, 76(7), pp. 1938-1941. Oxford University Press 10.1093/jac/dkab111
Campos-Madueno, Edgar I.; Sigrist, Thomas; Flückiger, Ursula M.; Risch, Lorenz; Bodmer, Thomas; Endimiani, Andrea (2021). First report of a blaVIM-1 metallo-β-lactamase-possessing Klebsiella michiganensis. Journal of global antimicrobial resistance, 25, pp. 310-314. Elsevier 10.1016/j.jgar.2021.03.027
Moser, Aline I.; Kuenzli, Esther; Büdel, Thomas; Campos-Madueno, Edgar I.; Bernasconi, Odette J.; DeCrom-Beer, Susan; Jakopp, Barbara; Mohammed, Ali Haji; Hassan, Nadir Khatib; Fehr, Jan; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2021). Travellers returning from the island of Zanzibar colonized with MDR Escherichia coli strains: assessing the impact of local people and other sources. The journal of antimicrobial chemotherapy, 76(2), pp. 330-337. Oxford University Press 10.1093/jac/dkaa457
Campos-Madueno, Edgar I.; Gmuer, Christian; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Characterization of a new blaVIM-1-carrying IncN2 plasmid from an Enterobacter hormaechei subsp. steigerwaltii. Journal of global antimicrobial resistance, 24, pp. 325-327. Elsevier 10.1016/j.jgar.2021.01.017
Moser, Aline I.; Kuenzli, Esther; Campos-Madueno, Edgar I.; Büdel, Thomas; Rattanavong, Sayaphet; Vongsouvath, Manivanh; Hatz, Christoph; Endimiani, Andrea (2021). Antimicrobial-Resistant Escherichia coli Strains and Their Plasmids in People, Poultry, and Chicken Meat in Laos. Frontiers in Microbiology, 12 Frontiers 10.3389/fmicb.2021.708182
Moser, Aline I.; Keller, Peter M.; Campos-Madueno, Edgar I.; Poirel, Laurent; Nordmann, Patrice; Endimiani, Andrea (2021). A Patient With Multiple Carbapenemase Producers Including an Unusual Citrobacter sedlakii Hosting an IncC blaNDM-1- and armA-carrying Plasmid. Pathogens and Immunity, 6(2), pp. 119-134. Case Western Reserve University, Cleveland, OH 10.20411/pai.v6i2.482
Endimiani, Andrea; Ramette, Alban; Rhoads, Daniel D.; Jacobs, Michael R. (2020). The Evolving Role of the Clinical Microbiology Laboratory in Identifying Resistance in Gram-Negative Bacteria: An Update. Infectious disease clinics of North America, 34(4), pp. 659-676. Elsevier 10.1016/j.idc.2020.08.001
Principe, Luigi; Bernasconi, Odette J.; Viaggi, Valentina; Campos-Madueno, Edgar I.; Endimiani, Andrea; Luzzaro, Francesco (2020). Emergence of Haemophilus parainfluenzae resistant to third-generation cephalosporins in Italy: potential role of PBP3 and PBP5 substitutions in high-level resistance. International journal of antimicrobial agents, 56(5), p. 106159. Elsevier 10.1016/j.ijantimicag.2020.106159
Büdel, Thomas; Kuenzli, Esther; Campos-Madueno, Edgar I; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2020). On the island of Zanzibar people in the community are frequently colonized with the same MDR Enterobacterales found in poultry and retailed chicken meat. The journal of antimicrobial chemotherapy, 75(9), pp. 2432-2441. Oxford University Press 10.1093/jac/dkaa198
European Patent Office (2020). Conjugative vectors selectable by fructooligosaccharides (3541942)
Endimiani, Andrea; Bernasconi, Odette Joëlle; Büdel, Thomas; Campos-Madueno, Edgar I.; Kuenzli, Esther; Hatz, Christoph; Carattoli, Alessandra (2020). Whole-genome characterization of a Shewanella algae strain co-harboring blaCTX-M-15 and armA genes on a novel IncC plasmid. Antimicrobial agents and chemotherapy, 64(5) American Society for Microbiology 10.1128/AAC.00267-20
Endimiani, Andrea; Brilhante, Michael; Bernasconi, Odette J.; Perreten, Vincent; Schmidt, Janne S; Dazio, Valentina; Nigg, Aurélien; Gobeli Brawand, Stefanie; Kuster, Stefan P; Schuller, Simone; Willi, Barbara (2020). Employees of Swiss veterinary clinics colonized with epidemic clones of carbapenemase-producing Escherichia coli. Journal of antimicrobial chemotherapy, 75(3), pp. 766-768. Oxford University Press 10.1093/jac/dkz470
Bernasconi, Odette J.; Campos-Madueno, Edgar I.; Donà, Valentina; Perreten, Vincent; Carattoli, Alessandra; Endimiani, Andrea (2020). Investigating the Use of Bacteriophages as New Decolonization Strategy for Intestinal Carriage of CTX-M-15-producing ST131 Escherichia coli: An In Vitro Continuous Culture System Model. Journal of global antimicrobial resistance, 22, pp. 664-671. Elsevier 10.1016/j.jgar.2020.05.018
Schmidt, Janne S.; Kuster, Stefan P.; Nigg, Aurélien; Dazio, Valentina; Brilhante, Michael; Rohrbach, Helene; Bernasconi, Odette J.; Büdel, Thomas; Campos-Madueno, Edgar I.; Gobeli Brawand, Stefanie; Schuller, Simone; Endimiani, Andrea; Perreten, Vincent; Willi, Barbara (2020). Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics. Antimicrobial resistance and infection control, 9(1) BioMed Central 10.1186/s13756-020-00742-5
Bleichenbacher, Stephanie; Stevens, Marc J.A.; Zurfluh, Katrin; Perreten, Vincent; Endimiani, Andrea; Stephan, Roger; Nüesch-Inderbinen, Magdalena (2020). Environmental dissemination of carbapenemase-producing enterobacteriaceae in rivers in Switzerland. Environmental pollution, 265, p. 115081. Elsevier Science 10.1016/j.envpol.2020.115081
Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20
Büdel, Thomas; Kuenzli, Esther; Clément, Mathieu; Bernasconi, Odette J.; Fehr, Jan; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2019). Polyclonal gut colonization with extended-spectrum cephalosporin- and/or colistin-resistant Enterobacteriaceae: a normal status for hotel employees on the island of Zanzibar, Tanzania. The journal of antimicrobial chemotherapy, 74(10), pp. 2880-2890. Oxford University Press 10.1093/jac/dkz296
Clément, Mathieu; Keller, Peter Michael; Bernasconi, Odette Joëlle; Stirnimann, Guido; Frey, Pascal M.; Bloemberg, Guido V.; Sendi, Parham; Endimiani, Andrea (2019). First Clinical Case of In Vivo Acquisition of DHA-1 plasmid-mediated AmpC in a Salmonella enterica subsp. enterica Isolate. Antimicrobial agents and chemotherapy, 63(10) American Society for Microbiology 10.1128/AAC.00992-19
Bernasconi, Odette Joëlle; Donà, Valentina; Tinguely, Regula; Endimiani, Andrea (2018). In Vitro Activity of 3 Commercial Bacteriophage Cocktails Against Salmonella and Shigella spp. Isolates of Human Origin. Pathogens and Immunity, 3(1), pp. 72-81. Case Western Reserve University, Cleveland, OH 10.20411/pai.v3i1.234
Clément, Mathieu; Büdel, Thomas; Bernasconi, Odette Joëlle; Principe, Luigi; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2018). The EDTA-based disk-combination tests are unreliable for the detection of MCR-mediated colistin-resistance in Enterobacteriaceae. Journal of microbiological methods, 153, pp. 31-34. Elsevier 10.1016/j.mimet.2018.08.008
Krämer, Julia; Do Couto Pires, Joao Pedro; Küffer, Marianne; Semaani, Eulalia; Endimiani, Andrea; Hilty, Markus; Oppliger, Anne (2017). Prevalence of extended-spectrum β-lactamase-producing Enterobacteriaceae and Methicillin-Resistant Staphylococcus aureus in pig farms in Switzerland. The Science of the total environment, 603-604, pp. 401-405. Elsevier 10.1016/j.scitotenv.2017.06.110
Bernasconi, Odette Joëlle; Principe, Luigi; Tinguely, Regula; Karczmarek, Aneta; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2017). Evaluation of a New Commercial Microarray Platform for the Simultaneous Detection of β-Lactamase and Mcr-1/-2 Genes in Enterobacteriaceae. Journal of clinical microbiology, 55(10), pp. 3138-3141. American Society for Microbiology 10.1128/JCM.01056-17
Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4 (2017) 519-521]. International journal of antimicrobial agents, 50(2), p. 276. Elsevier 10.1016/j.ijantimicag.2017.05.002
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Kasraian Fard, Sara; Hilty, Markus; Perreten, Vincent; Endimiani, Andrea (2016). Intestinal colonisation with extended-spectrum cephalosporin-resistant Escherichia coli in Swiss pets: molecular features, risk factors and transmission with owners. International journal of antimicrobial agents, 48(6), pp. 759-760. Elsevier 10.1016/j.ijantimicag.2016.08.007
Pires, João; Kuenzli, Esther; Kasraian Fard, Sara; Tinguely, Regula; Furrer, Hansjakob; Hilty, Markus; Hatz, Christoph; Endimiani, Andrea (2016). Polyclonal Intestinal Colonization with Extended-Spectrum Cephalosporin-Resistant Enterobacteriaceae upon Traveling to India. Frontiers in Microbiology, 7(1069), p. 1069. Frontiers 10.3389/fmicb.2016.01069
Pires, João; Siriwardena, Thissa N.; Stach, Michaela; Tinguely, Regula; Kasraian Fard, Sara; Luzzaro, Francesco; Leib, Stephen; Darbre, Tamis; Reymond, Jean-Louis; Endimiani, Andrea (2015). In Vitro Activity of the Novel Antimicrobial Peptide Dendrimer G3KL against Multidrug-Resistant Acinetobacter baumannii and Pseudomonas aeruginosa. Antimicrobial agents and chemotherapy, 59(12), pp. 7915-7918. American Society for Microbiology 10.1128/AAC.01853-15
Pires, João; Taracila, Magdalena; Bethel, Christopher R; Doi, Yohei; Kasraian Fard, Sara; Tinguely, Regula; Sendi, Parham; Bonomo, Robert A; Endimiani, Andrea (2015). In vivo Evolution of CMY-2 to CMY-33 β-Lactamase in Escherichia coli ST131: Characterization of an Acquired Extended-Spectrum AmpC (ESAC) Conferring Resistance to Cefepime. Antimicrobial agents and chemotherapy, 59(12), pp. 7483-7488. American Society for Microbiology 10.1128/AAC.01804-15
Endimiani, Andrea; Guilarte, Yuvia; Tinguely, Regula; Hirzberger, Lea; Selvini, Sylvia; Lupo, Agnese; Hauser, Christoph; Furrer, Hansjakob (2014). Characterization of Neisseria gonorrhoeae isolates detected in Switzerland (1998–2012): emergence of multidrug-resistant clones less susceptible to cephalosporins. BMC infectious diseases, 14(1), pp. 106-116. BioMed Central 10.1186/1471-2334-14-106
Seiffert, Salome Nadja; Carattoli, Alessandra; Tinguely, Regula; Lupo, Agnese; Perreten, Vincent; Endimiani, Andrea (2014). High Prevalence of Extended-Spectrum β-Lactamase, Plasmid-Mediated AmpC and Carbapenemase genes in Food for Pets. Antimicrobial agents and chemotherapy, 58(10), pp. 6320-6323. American Society for Microbiology 10.1128/AAC.03185-14
Seiffert, Salome N.; Tinguely, Regula; Lupo, Agnese; Neuwirth, Catherine; Perreten, Vincent; Endimiani, Andrea (2013). High prevalence of extended-spectrum-cephalosporin-resistant enterobacteriaceae in poultry meat in Switzerland: emergence of CMY-2- and VEB-6-possessing Proteus mirabilis. Antimicrobial agents and chemotherapy, 57(12), pp. 6406-6408. American Society for Microbiology 10.1128/AAC.01773-13
Kröll, Dino; Erdem, Suna; Noser, L; Arnold, D; Storni, Federico Lorenzo; Dislich, Bastian; Langer, D; Candinas, Daniel; Seiler, Christian A. (June 2016). Evolving concepts and outcome in esophageal cancer surgery- a single center experience from the past to present (Unpublished). In: Jahreskongress der Schweizerischen Gesellschaft für Chirurgie. Lugano. 01.-03.06.2016.
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Ernst, Alexander; Piragyte, Indre; MP, Ayisha Marwa; Le, Ngoc Dung; Grandgirard, Denis; Leib, Stephen L.; Oates, Andrew; Mercader, Nadia (2023). Identification of side effects of COVID-19 drug candidates on embryogenesis using an integrated zebrafish screening platform. Scientific reports, 13(1), p. 17037. Springer Nature 10.1038/s41598-023-43911-3
Reichmuth, Martina L.; Hömke, Rico; Zürcher, Kathrin; Sander, Peter; Avihingsanon, Anchalee; Collantes, Jimena; Loiseau, Chloé; Borrell, Sonia; Reinhard, Miriam; Wilkinson, Robert J; Yotebieng, Marcel; Fenner, Lukas; Böttger, Erik C; Gagneux, Sebastien; Egger, Matthias; Keller, Peter Michael (2020). Natural Polymorphisms in Mycobacterium tuberculosis Conferring Resistance to Delamanid in Drug-naïve Patients. Antimicrobial agents and chemotherapy, 64(11), e00513-20. American Society for Microbiology 10.1128/AAC.00513-20
Calzavarini, Sara; Brodard, Justine; Quarroz, Claudia; Maire, Livia; Nützi, Raphael; Jankovic, Jovana; Rotondo, Laura C; Giabbani, Evelyne; Fiedler, Georg Martin; Nagler, Michael; Angelillo-Scherrer, Anne (2019). Thrombin generation measurement using the ST Genesia Thrombin Generation System in a cohort of healthy adults: Normal values and variability. Research and practice in thrombosis and haemostasis, 3(4), pp. 758-768. Wiley 10.1002/rth2.12238
Raemy, Samuel; Casanova, Carlo; Baldan, Rossella; Barreto, Erin; Tande, Aaron J; Endimiani, Andrea; Leib, Stephen L; Fischer, Urs; Sendi, Parham (2023). Penicillin-Susceptible Streptococcus pneumoniae Meningitis in Adults: Does the Ceftriaxone Dosing Matter? Antibiotics, 12(5) MDPI 10.3390/antibiotics12050878
Clément, Mathieu; Keller, Peter Michael; Bernasconi, Odette Joëlle; Stirnimann, Guido; Frey, Pascal M.; Bloemberg, Guido V.; Sendi, Parham; Endimiani, Andrea (2019). First Clinical Case of In Vivo Acquisition of DHA-1 plasmid-mediated AmpC in a Salmonella enterica subsp. enterica Isolate. Antimicrobial agents and chemotherapy, 63(10) American Society for Microbiology 10.1128/AAC.00992-19
Frey, Pascal Marcel; Marti, Grischa Robert; Droz, Sara Christine; de Roche von Arx, Mirjam; Suter, Franziska Marta; Aujesky, Drahomir; Brugger, Silvio (2019). Bacterial colonization of handheld devices in a tertiary care setting: a hygiene intervention study. Antimicrobial Resistance and Infection Control, 8(97), p. 97. BioMed Central 10.1186/s13756-019-0546-y
Friedli, Olivier; Völlmy, Irene; Schrenzel, Jacques; Harbarth, Stephan; Kronenberg, Andreas (2022). Retrospective data analysis for definition of multidrug resistance in gram-negative bacteria - a consensus proposal. Swiss medical weekly, 152(w30195), w30195. EMH Media 10.4414/smw.2022.w30195
Ruppen, Corinne; Fröhlicher, Simone; Sendi, Parham (2017). Gentamicin susceptibility of 567 clinical group B streptococcal isolates. Journal of global antimicrobial resistance, 10, pp. 304-305. Elsevier 10.1016/j.jgar.2017.07.005
Bograd, Alexandra; Seiler, Günter Theodor Michael; Droz, Sara Christine; Zimmerli, Stefan; Früh Epstein, Beatrice; Tappeiner, Christoph (2019). Bacterial and Fungal Keratitis: A Retrospective Analysis at a University Hospital in Switzerland. Klinische Monatsblätter für Augenheilkunde, 236(4), pp. 358-365. Thieme 10.1055/a-0774-7756
Keller, Peter M; Furrer, Hansjakob (2020). Think tuberculosis-but is thinking enough? The lancet. Infectious diseases, 20(6), pp. 639-640. Elsevier 10.1016/S1473-3099(20)30138-9
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4 (2017) 519-521]. International journal of antimicrobial agents, 50(2), p. 276. Elsevier 10.1016/j.ijantimicag.2017.05.002
Pires, João; Kuenzli, Esther; Kasraian Fard, Sara; Tinguely, Regula; Furrer, Hansjakob; Hilty, Markus; Hatz, Christoph; Endimiani, Andrea (2016). Polyclonal Intestinal Colonization with Extended-Spectrum Cephalosporin-Resistant Enterobacteriaceae upon Traveling to India. Frontiers in Microbiology, 7(1069), p. 1069. Frontiers 10.3389/fmicb.2016.01069
Endimiani, Andrea; Guilarte, Yuvia; Tinguely, Regula; Hirzberger, Lea; Selvini, Sylvia; Lupo, Agnese; Hauser, Christoph; Furrer, Hansjakob (2014). Characterization of Neisseria gonorrhoeae isolates detected in Switzerland (1998–2012): emergence of multidrug-resistant clones less susceptible to cephalosporins. BMC infectious diseases, 14(1), pp. 106-116. BioMed Central 10.1186/1471-2334-14-106
Werren, Joel P.; Troxler, Lukas J.; Oyewole, Oluwaseun Rume-Abiola; Ramette, Alban; Brugger, Silvio D.; Bruggmann, Rémy; van der Linden, Mark; Nahm, Moon H.; Gjuroski, Ilche; Casanova, Carlo; Furrer, Julien; Hilty, Markus (2021). Carbon Source-Dependent Changes of the Structure of Streptococcus pneumoniae Capsular Polysaccharide with Serotype 6F. International journal of molecular sciences, 22(9) MDPI 10.3390/ijms22094580
Sommerstein, Rami; Führer, Urs; Lo Priore, Elia Francesco; Casanova, Carlo; Meinel, Dominik M; Seth-Smith, Helena Mb; Kronenberg, Andreas Oskar; Koch, Daniel; Senn, Laurence; Widmer, Andreas F; Egli, Adrian; Marschall, Jonas (2017). Burkholderia stabilis outbreak associated with contaminated commercially-available washing gloves, Switzerland, May 2015 to August 2016. Eurosurveillance, 22(49) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2017.22.49.17-00213
Pitton, Melissa; Valente, Luca G; Oberhaensli, Simone; Casanova, Carlo; Sendi, Parham; Schnegg, Bruno; Jakob, Stephan M; Cameron, David R; Que, Yok-Ai; Fürholz, Monika (2023). Dynamics of bacterial pathogens at the driveline exit site in patients with ventricular assist devices: a prospective, observational, single-centre cohort study. The Journal of heart and lung transplantation, 42(10), pp. 1445-1454. Elsevier 10.1016/j.healun.2023.05.016
Werren, Joel P.; Troxler, Lukas J.; Oyewole, Oluwaseun Rume-Abiola; Ramette, Alban; Brugger, Silvio D.; Bruggmann, Rémy; van der Linden, Mark; Nahm, Moon H.; Gjuroski, Ilche; Casanova, Carlo; Furrer, Julien; Hilty, Markus (2021). Carbon Source-Dependent Changes of the Structure of Streptococcus pneumoniae Capsular Polysaccharide with Serotype 6F. International journal of molecular sciences, 22(9) MDPI 10.3390/ijms22094580
Endimiani, Andrea; Brilhante, Michael; Bernasconi, Odette J.; Perreten, Vincent; Schmidt, Janne S; Dazio, Valentina; Nigg, Aurélien; Gobeli Brawand, Stefanie; Kuster, Stefan P; Schuller, Simone; Willi, Barbara (2020). Employees of Swiss veterinary clinics colonized with epidemic clones of carbapenemase-producing Escherichia coli. Journal of antimicrobial chemotherapy, 75(3), pp. 766-768. Oxford University Press 10.1093/jac/dkz470
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Ernst, Alexander; Piragyte, Indre; MP, Ayisha Marwa; Le, Ngoc Dung; Grandgirard, Denis; Leib, Stephen L.; Oates, Andrew; Mercader, Nadia (2023). Identification of side effects of COVID-19 drug candidates on embryogenesis using an integrated zebrafish screening platform. Scientific reports, 13(1), p. 17037. Springer Nature 10.1038/s41598-023-43911-3
Brönnimann, Michael P.; Hirzberger, Lea; Keller, Peter M.; Gsell-Albert, Monika (2023). Antibacterial Effects of X-ray and MRI Contrast Media: An In Vitro Pilot Study. International journal of molecular sciences, 24(4), p. 3470. MDPI 10.3390/ijms24043470
Endimiani, Andrea; Guilarte, Yuvia; Tinguely, Regula; Hirzberger, Lea; Selvini, Sylvia; Lupo, Agnese; Hauser, Christoph; Furrer, Hansjakob (2014). Characterization of Neisseria gonorrhoeae isolates detected in Switzerland (1998–2012): emergence of multidrug-resistant clones less susceptible to cephalosporins. BMC infectious diseases, 14(1), pp. 106-116. BioMed Central 10.1186/1471-2334-14-106
Günther, Gunar; Ruswa, Nunurai; Keller, Peter M (2022). Drug-resistant tuberculosis: advances in diagnosis and management. Current opinion in pulmonary medicine, 28(3), pp. 211-217. Wolters Kluwer Health 10.1097/MCP.0000000000000866
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4 (2017) 519-521]. International journal of antimicrobial agents, 50(2), p. 276. Elsevier 10.1016/j.ijantimicag.2017.05.002
Endimiani, Andrea; Guilarte, Yuvia; Tinguely, Regula; Hirzberger, Lea; Selvini, Sylvia; Lupo, Agnese; Hauser, Christoph; Furrer, Hansjakob (2014). Characterization of Neisseria gonorrhoeae isolates detected in Switzerland (1998–2012): emergence of multidrug-resistant clones less susceptible to cephalosporins. BMC infectious diseases, 14(1), pp. 106-116. BioMed Central 10.1186/1471-2334-14-106
Casanova, Carlo; Küffer, Marianne; Leib, Stephen L.; Hilty, Markus (2021). Re-emergence of invasive pneumococcal disease (IPD) and increase of serotype 23B after easing of COVID-19 measures, Switzerland, 2021. Emerging microbes & infections, 10(1), pp. 2202-2204. Taylor & Francis 10.1080/22221751.2021.2000892
Brueggemann, Angela B; Jansen van Rensburg, Melissa J; Shaw, David; McCarthy, Noel D; Jolley, Keith A; Maiden, Martin C J; van der Linden, Mark P G; Amin-Chowdhury, Zahin; Bennett, Désirée E; Borrow, Ray; Brandileone, Maria-Cristina C; Broughton, Karen; Campbell, Ruth; Cao, Bin; Casanova, Carlo; Choi, Eun Hwa; Chu, Yiu Wai; Clark, Stephen A; Claus, Heike; Coelho, Juliana; ... (2021). Changes in the incidence of invasive disease due to Streptococcus pneumoniae, Haemophilus influenzae, and Neisseria meningitidis during the COVID-19 pandemic in 26 countries and territories in the Invasive Respiratory Infection Surveillance Initiative: a prospective analysis of surveillance data. The Lancet. Digital health, 3(6), e360-e370. Elsevier 10.1016/S2589-7500(21)00077-7
Oyewole, Oluwaseun Rume-Abiola; Lang, Phung; Albrich, Werner C.; Wissel, Kerstin; Leib, Stephen L.; Casanova, Carlo; Hilty, Markus (2021). The Impact of Pneumococcal Conjugate Vaccine (PCV) Coverage Heterogeneities on the Changing Epidemiology of Invasive Pneumococcal Disease in Switzerland, 2005–2019. Microorganisms, 9(5) MDPI 10.3390/microorganisms9051078
Werren, Joel P.; Troxler, Lukas J.; Oyewole, Oluwaseun Rume-Abiola; Ramette, Alban; Brugger, Silvio D.; Bruggmann, Rémy; van der Linden, Mark; Nahm, Moon H.; Gjuroski, Ilche; Casanova, Carlo; Furrer, Julien; Hilty, Markus (2021). Carbon Source-Dependent Changes of the Structure of Streptococcus pneumoniae Capsular Polysaccharide with Serotype 6F. International journal of molecular sciences, 22(9) MDPI 10.3390/ijms22094580
Krämer, Julia; Do Couto Pires, Joao Pedro; Küffer, Marianne; Semaani, Eulalia; Endimiani, Andrea; Hilty, Markus; Oppliger, Anne (2017). Prevalence of extended-spectrum β-lactamase-producing Enterobacteriaceae and Methicillin-Resistant Staphylococcus aureus in pig farms in Switzerland. The Science of the total environment, 603-604, pp. 401-405. Elsevier 10.1016/j.scitotenv.2017.06.110
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Kasraian Fard, Sara; Hilty, Markus; Perreten, Vincent; Endimiani, Andrea (2016). Intestinal colonisation with extended-spectrum cephalosporin-resistant Escherichia coli in Swiss pets: molecular features, risk factors and transmission with owners. International journal of antimicrobial agents, 48(6), pp. 759-760. Elsevier 10.1016/j.ijantimicag.2016.08.007
Pires, João; Kuenzli, Esther; Kasraian Fard, Sara; Tinguely, Regula; Furrer, Hansjakob; Hilty, Markus; Hatz, Christoph; Endimiani, Andrea (2016). Polyclonal Intestinal Colonization with Extended-Spectrum Cephalosporin-Resistant Enterobacteriaceae upon Traveling to India. Frontiers in Microbiology, 7(1069), p. 1069. Frontiers 10.3389/fmicb.2016.01069
Brönnimann, Michael P.; Hirzberger, Lea; Keller, Peter M.; Gsell-Albert, Monika (2023). Antibacterial Effects of X-ray and MRI Contrast Media: An In Vitro Pilot Study. International journal of molecular sciences, 24(4), p. 3470. MDPI 10.3390/ijms24043470
Endimiani, Andrea; Guilarte, Yuvia; Tinguely, Regula; Hirzberger, Lea; Selvini, Sylvia; Lupo, Agnese; Hauser, Christoph; Furrer, Hansjakob (2014). Characterization of Neisseria gonorrhoeae isolates detected in Switzerland (1998–2012): emergence of multidrug-resistant clones less susceptible to cephalosporins. BMC infectious diseases, 14(1), pp. 106-116. BioMed Central 10.1186/1471-2334-14-106
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Pitton, Melissa; Valente, Luca G; Oberhaensli, Simone; Casanova, Carlo; Sendi, Parham; Schnegg, Bruno; Jakob, Stephan M; Cameron, David R; Que, Yok-Ai; Fürholz, Monika (2023). Dynamics of bacterial pathogens at the driveline exit site in patients with ventricular assist devices: a prospective, observational, single-centre cohort study. The Journal of heart and lung transplantation, 42(10), pp. 1445-1454. Elsevier 10.1016/j.healun.2023.05.016
Piezzi, Vanja; Wassilew, Nasstasja; Atkinson, Andrew; D'Incau, Stéphanie; Kaspar, Tanja; Seth-Smith, Helena MB; Casanova, Carlo; Bittel, Pascal; Jent, Philipp; Sommerstein, Rami; Buetti, Niccolò; Marschall, Jonas (2022). Nosocomial outbreak of vancomycin-resistant Enterococcus faecium (VRE) ST796, Switzerland, 2017 to 2020. Eurosurveillance, 27(48) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.48.2200285
Piezzi, Vanja; Wassilew, Nasstasja; Atkinson, Andrew; D'Incau, Stéphanie; Kaspar, Tanja; Seth-Smith, Helena MB; Casanova, Carlo; Bittel, Pascal; Jent, Philipp; Sommerstein, Rami; Buetti, Niccolò; Marschall, Jonas (2022). Nosocomial outbreak of vancomycin-resistant Enterococcus faecium (VRE) ST796, Switzerland, 2017 to 2020. Eurosurveillance, 27(48) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.48.2200285
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Kasraian Fard, Sara; Hilty, Markus; Perreten, Vincent; Endimiani, Andrea (2016). Intestinal colonisation with extended-spectrum cephalosporin-resistant Escherichia coli in Swiss pets: molecular features, risk factors and transmission with owners. International journal of antimicrobial agents, 48(6), pp. 759-760. Elsevier 10.1016/j.ijantimicag.2016.08.007
Pires, João; Kuenzli, Esther; Kasraian Fard, Sara; Tinguely, Regula; Furrer, Hansjakob; Hilty, Markus; Hatz, Christoph; Endimiani, Andrea (2016). Polyclonal Intestinal Colonization with Extended-Spectrum Cephalosporin-Resistant Enterobacteriaceae upon Traveling to India. Frontiers in Microbiology, 7(1069), p. 1069. Frontiers 10.3389/fmicb.2016.01069
Pires, João; Siriwardena, Thissa N.; Stach, Michaela; Tinguely, Regula; Kasraian Fard, Sara; Luzzaro, Francesco; Leib, Stephen; Darbre, Tamis; Reymond, Jean-Louis; Endimiani, Andrea (2015). In Vitro Activity of the Novel Antimicrobial Peptide Dendrimer G3KL against Multidrug-Resistant Acinetobacter baumannii and Pseudomonas aeruginosa. Antimicrobial agents and chemotherapy, 59(12), pp. 7915-7918. American Society for Microbiology 10.1128/AAC.01853-15
Pires, João; Taracila, Magdalena; Bethel, Christopher R; Doi, Yohei; Kasraian Fard, Sara; Tinguely, Regula; Sendi, Parham; Bonomo, Robert A; Endimiani, Andrea (2015). In vivo Evolution of CMY-2 to CMY-33 β-Lactamase in Escherichia coli ST131: Characterization of an Acquired Extended-Spectrum AmpC (ESAC) Conferring Resistance to Cefepime. Antimicrobial agents and chemotherapy, 59(12), pp. 7483-7488. American Society for Microbiology 10.1128/AAC.01804-15
Brönnimann, Michael P.; Hirzberger, Lea; Keller, Peter M.; Gsell-Albert, Monika (2023). Antibacterial Effects of X-ray and MRI Contrast Media: An In Vitro Pilot Study. International journal of molecular sciences, 24(4), p. 3470. MDPI 10.3390/ijms24043470
Seth-Smith, Helena M B; Casanova, Carlo; Sommerstein, Rami; Meinel, Dominik M; Abdelbary, Mohamed M H; Blanc, Dominique S; Droz, Sara; Führer, Urs; Lienhard, Reto; Lang, Claudia; Dubuis, Olivier; Schlegel, Matthias; Widmer, Andreas; Keller, Peter Markus; Marschall, Jonas; Egli, Adrian (2019). Phenotypic and Genomic Analyses of Burkholderia stabilis Clinical Contamination, Switzerland. Emerging infectious diseases, 25(6), pp. 1084-1092. U.S. National Center for Infectious Diseases 10.3201/eid2506.172119
Kofler, Jacob; Ramette, Alban; Iseli, Patricia; Stauber, Lea; Fichtner, Jens; Droz, Sara; Zihler Berner, Annina; Meier, Anna Bettina; Begert, Michelle; Negri, Sabine; Jachmann, Anne; Keller, Peter Michael; Staehelin, Cornelia; Grützmacher, Barbara (2022). Ongoing toxin-positive diphtheria outbreaks in a federal asylum centre in Switzerland, analysis July to September 2022. Eurosurveillance, 27(44) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.44.2200811
Günther, Gunar; Ruswa, Nunurai; Keller, Peter M (2022). Drug-resistant tuberculosis: advances in diagnosis and management. Current opinion in pulmonary medicine, 28(3), pp. 211-217. Wolters Kluwer Health 10.1097/MCP.0000000000000866
Müller, Martin; Sägesser, Nadine; Keller, Peter M; Arampatzis, Spyridon; Steffens, Benedict; Ehrhard, Simone; Leichtle, Alexander B (2022). Urine Flow Cytometry Parameter Cannot Safely Predict Contamination of Urine-A Cohort Study of a Swiss Emergency Department Using Machine Learning Techniques. Diagnostics, 12(4) MDPI 10.3390/diagnostics12041008
Moser, Aline I.; Campos-Madueno, Edgar I.; Sendi, Parham; Perreten, Vincent; Keller, Peter M.; Ramette, Alban; Endimiani, Andrea (2021). Repatriation of a patient with COVID-19 contributed to the importation of an emerging carbapenemase producer. Journal of global antimicrobial resistance, 27, pp. 267-272. Elsevier 10.1016/j.jgar.2021.10.012
Moser, Aline; Campos-Madueno, Edgar Igor; Keller, Peter Michael; Endimiani, Andrea (2021). Complete Genome Sequence of a Third- and Fourth-Generation Cephalosporin-Resistant Comamonas kerstersii Isolate. Microbiology resource announcements, 10(28), e0039121. American Society for Microbiology 10.1128/MRA.00391-21
Moser, Aline I.; Keller, Peter M.; Campos-Madueno, Edgar I.; Poirel, Laurent; Nordmann, Patrice; Endimiani, Andrea (2021). A Patient With Multiple Carbapenemase Producers Including an Unusual Citrobacter sedlakii Hosting an IncC blaNDM-1- and armA-carrying Plasmid. Pathogens and Immunity, 6(2), pp. 119-134. Case Western Reserve University, Cleveland, OH 10.20411/pai.v6i2.482
Egli, Konrad; Wagner, Karoline; Keller, Peter M.; Risch, Lorenz; Risch, Martin; Bodmer, Thomas (2020). Comparison of the Diagnostic Performance of qPCR, Sanger Sequencing, and Whole-Genome Sequencing in Determining Clarithromycin and Levofloxacin Resistance in Helicobacter pylori. Frontiers in cellular and infection microbiology, 10(596371), p. 596371. Frontiers 10.3389/fcimb.2020.596371
Keller, Peter M. (2020). Aktueller Stand der Diagnostik von Harnwegsinfektionen (In Press). Pipette - Swiss laboratory medicine, 20(6), pp. 7-9. EMH Schweizerischer Ärzteverlag AG
Reichmuth, Martina L.; Hömke, Rico; Zürcher, Kathrin; Sander, Peter; Avihingsanon, Anchalee; Collantes, Jimena; Loiseau, Chloé; Borrell, Sonia; Reinhard, Miriam; Wilkinson, Robert J; Yotebieng, Marcel; Fenner, Lukas; Böttger, Erik C; Gagneux, Sebastien; Egger, Matthias; Keller, Peter Michael (2020). Natural Polymorphisms in Mycobacterium tuberculosis Conferring Resistance to Delamanid in Drug-naïve Patients. Antimicrobial agents and chemotherapy, 64(11), e00513-20. American Society for Microbiology 10.1128/AAC.00513-20
Keller, Peter M; Furrer, Hansjakob (2020). Think tuberculosis-but is thinking enough? The lancet. Infectious diseases, 20(6), pp. 639-640. Elsevier 10.1016/S1473-3099(20)30138-9
Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20
Clément, Mathieu; Keller, Peter Michael; Bernasconi, Odette Joëlle; Stirnimann, Guido; Frey, Pascal M.; Bloemberg, Guido V.; Sendi, Parham; Endimiani, Andrea (2019). First Clinical Case of In Vivo Acquisition of DHA-1 plasmid-mediated AmpC in a Salmonella enterica subsp. enterica Isolate. Antimicrobial agents and chemotherapy, 63(10) American Society for Microbiology 10.1128/AAC.00992-19
Lauener, Francis N; Imkamp, Frank; Lehours, Philippe; Buissonnière, Alice; Benejat, Lucie; Zbinden, Reinhard; Keller, Peter M.; Wagner, Karoline (2019). Genetic Determinants and Prediction of Antibiotic Resistance Phenotypes in Helicobacter pylori. Journal of clinical medicine, 8(1) MDPI 10.3390/jcm8010053
Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337
Cuénod, Aline; Aerni, Martina; Bagutti, Claudia; Bayraktar, Banu; Boz, Efe Serkan; Carneiro, Cynthia Beisert; Casanova, Carlo; Coste, Alix T; Damborg, Peter; van Dam, Dick; Demirci, Mehmet; Drevinek, Pavel; Dubuis, Olivier; Fernandez, José; Greub, Gilbert; Hrabak, Jaroslav; Yiğitler, Gülen Hürkal; Hurych, Jakub; Jensen, Thøger Gorm; Jost, Géraldine; ... (2023). Quality of MALDI-TOF Mass Spectra in Routine Diagnostics: Results from an International External Quality Assessment including 36 Laboratories from 12 countries using 47 challenging bacterial strains. Clinical microbiology and infection, 29(2), pp. 190-199. Elsevier 10.1016/j.cmi.2022.05.017
Baldan, Rossella; Droz, Sara; Casanova, Carlo; Knabben, Laura; Huang, Dorothy J; Brülisauer, Christine; Kind, André B; Krause, Elke; Mauerer, Stefanie; Spellerberg, Barbara; Sendi, Parham (2021). Group B streptococcal colonization in elderly women. BMC infectious diseases, 21(1), p. 408. BioMed Central 10.1186/s12879-021-06102-x
Baldan, Rossella; Droz, Sara; Casanova, Carlo; Knabben, Laura; Huang, Dorothy J; Brülisauer, Christine; Kind, André B; Krause, Elke; Mauerer, Stefanie; Spellerberg, Barbara; Sendi, Parham (2021). Group B streptococcal colonization in elderly women. BMC infectious diseases, 21(1), p. 408. BioMed Central 10.1186/s12879-021-06102-x
Friedli, Olivier; Völlmy, Irene; Schrenzel, Jacques; Harbarth, Stephan; Kronenberg, Andreas (2022). Retrospective data analysis for definition of multidrug resistance in gram-negative bacteria - a consensus proposal. Swiss medical weekly, 152(w30195), w30195. EMH Media 10.4414/smw.2022.w30195
Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20
Sommerstein, Rami; Führer, Urs; Lo Priore, Elia Francesco; Casanova, Carlo; Meinel, Dominik M; Seth-Smith, Helena Mb; Kronenberg, Andreas Oskar; Koch, Daniel; Senn, Laurence; Widmer, Andreas F; Egli, Adrian; Marschall, Jonas (2017). Burkholderia stabilis outbreak associated with contaminated commercially-available washing gloves, Switzerland, May 2015 to August 2016. Eurosurveillance, 22(49) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2017.22.49.17-00213
Krämer, Julia; Do Couto Pires, Joao Pedro; Küffer, Marianne; Semaani, Eulalia; Endimiani, Andrea; Hilty, Markus; Oppliger, Anne (2017). Prevalence of extended-spectrum β-lactamase-producing Enterobacteriaceae and Methicillin-Resistant Staphylococcus aureus in pig farms in Switzerland. The Science of the total environment, 603-604, pp. 401-405. Elsevier 10.1016/j.scitotenv.2017.06.110
Kröll, Dino; Erdem, Suna; Noser, L; Arnold, D; Storni, Federico Lorenzo; Dislich, Bastian; Langer, D; Candinas, Daniel; Seiler, Christian A. (June 2016). Evolving concepts and outcome in esophageal cancer surgery- a single center experience from the past to present (Unpublished). In: Jahreskongress der Schweizerischen Gesellschaft für Chirurgie. Lugano. 01.-03.06.2016.
Bächli, Magi; Sommerstein, Rami; Casanova, Carlo; Droz, Sara; Küffer, Marianne; Marschall, Jonas (2022). Meticillin-resistant Staphylococcus aureus Contact Screening Strategy in a Low Prevalence Setting; a Nested Case-Control Study. Infection prevention in practice, 4(2), p. 100211. Elsevier 10.1016/j.infpip.2022.100211
Casanova, Carlo; Küffer, Marianne; Leib, Stephen L.; Hilty, Markus (2021). Re-emergence of invasive pneumococcal disease (IPD) and increase of serotype 23B after easing of COVID-19 measures, Switzerland, 2021. Emerging microbes & infections, 10(1), pp. 2202-2204. Taylor & Francis 10.1080/22221751.2021.2000892
Krämer, Julia; Do Couto Pires, Joao Pedro; Küffer, Marianne; Semaani, Eulalia; Endimiani, Andrea; Hilty, Markus; Oppliger, Anne (2017). Prevalence of extended-spectrum β-lactamase-producing Enterobacteriaceae and Methicillin-Resistant Staphylococcus aureus in pig farms in Switzerland. The Science of the total environment, 603-604, pp. 401-405. Elsevier 10.1016/j.scitotenv.2017.06.110
Kuenzli, Andrea B.; Burri, Silvie; Casanova, Carlo; Sommerstein, Rami; Buetti, Niccolo; Seth-Smith, Helena Mb; Bodmer, Thomas; Egli, Adrian; Marschall, Jonas (2020). Successful Management of a Clostridioides difficile Ribotype 027 Outbreak with a Lean Intervention Bundle. The journal of hospital infection, 106(2), pp. 240-245. Elsevier 10.1016/j.jhin.2020.07.034
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Ernst, Alexander; Piragyte, Indre; MP, Ayisha Marwa; Le, Ngoc Dung; Grandgirard, Denis; Leib, Stephen L.; Oates, Andrew; Mercader, Nadia (2023). Identification of side effects of COVID-19 drug candidates on embryogenesis using an integrated zebrafish screening platform. Scientific reports, 13(1), p. 17037. Springer Nature 10.1038/s41598-023-43911-3
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Raemy, Samuel; Casanova, Carlo; Baldan, Rossella; Barreto, Erin; Tande, Aaron J; Endimiani, Andrea; Leib, Stephen L; Fischer, Urs; Sendi, Parham (2023). Penicillin-Susceptible Streptococcus pneumoniae Meningitis in Adults: Does the Ceftriaxone Dosing Matter? Antibiotics, 12(5) MDPI 10.3390/antibiotics12050878
Ernst, Alexander; Piragyte, Indre; MP, Ayisha Marwa; Le, Ngoc Dung; Grandgirard, Denis; Leib, Stephen L.; Oates, Andrew; Mercader, Nadia (2023). Identification of side effects of COVID-19 drug candidates on embryogenesis using an integrated zebrafish screening platform. Scientific reports, 13(1), p. 17037. Springer Nature 10.1038/s41598-023-43911-3
Casanova, Carlo; Küffer, Marianne; Leib, Stephen L.; Hilty, Markus (2021). Re-emergence of invasive pneumococcal disease (IPD) and increase of serotype 23B after easing of COVID-19 measures, Switzerland, 2021. Emerging microbes & infections, 10(1), pp. 2202-2204. Taylor & Francis 10.1080/22221751.2021.2000892
Oyewole, Oluwaseun Rume-Abiola; Lang, Phung; Albrich, Werner C.; Wissel, Kerstin; Leib, Stephen L.; Casanova, Carlo; Hilty, Markus (2021). The Impact of Pneumococcal Conjugate Vaccine (PCV) Coverage Heterogeneities on the Changing Epidemiology of Invasive Pneumococcal Disease in Switzerland, 2005–2019. Microorganisms, 9(5) MDPI 10.3390/microorganisms9051078
Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Pires, João; Siriwardena, Thissa N.; Stach, Michaela; Tinguely, Regula; Kasraian Fard, Sara; Luzzaro, Francesco; Leib, Stephen; Darbre, Tamis; Reymond, Jean-Louis; Endimiani, Andrea (2015). In Vitro Activity of the Novel Antimicrobial Peptide Dendrimer G3KL against Multidrug-Resistant Acinetobacter baumannii and Pseudomonas aeruginosa. Antimicrobial agents and chemotherapy, 59(12), pp. 7915-7918. American Society for Microbiology 10.1128/AAC.01853-15
Müller, Martin; Sägesser, Nadine; Keller, Peter M; Arampatzis, Spyridon; Steffens, Benedict; Ehrhard, Simone; Leichtle, Alexander B (2022). Urine Flow Cytometry Parameter Cannot Safely Predict Contamination of Urine-A Cohort Study of a Swiss Emergency Department Using Machine Learning Techniques. Diagnostics, 12(4) MDPI 10.3390/diagnostics12041008
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Casanova, Carlo; Lo Priore, Elia; Egli, Adrian; Seth-Smith, Helena M B; Räber, Lorenz; Ott, Daniel; Pflüger, Valentin; Droz, Sara Christine; Marschall, Jonas; Sommerstein, Rami (2019). Agrobacterium spp. nosocomial outbreak assessment using rapid MALDI-TOF MS based typing, confirmed by whole genome sequencing. Antimicrobial resistance and infection control, 8, p. 171. BioMed Central 10.1186/s13756-019-0619-y
Sommerstein, Rami; Führer, Urs; Lo Priore, Elia Francesco; Casanova, Carlo; Meinel, Dominik M; Seth-Smith, Helena Mb; Kronenberg, Andreas Oskar; Koch, Daniel; Senn, Laurence; Widmer, Andreas F; Egli, Adrian; Marschall, Jonas (2017). Burkholderia stabilis outbreak associated with contaminated commercially-available washing gloves, Switzerland, May 2015 to August 2016. Eurosurveillance, 22(49) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2017.22.49.17-00213
Endimiani, Andrea; Guilarte, Yuvia; Tinguely, Regula; Hirzberger, Lea; Selvini, Sylvia; Lupo, Agnese; Hauser, Christoph; Furrer, Hansjakob (2014). Characterization of Neisseria gonorrhoeae isolates detected in Switzerland (1998–2012): emergence of multidrug-resistant clones less susceptible to cephalosporins. BMC infectious diseases, 14(1), pp. 106-116. BioMed Central 10.1186/1471-2334-14-106
Seiffert, Salome Nadja; Carattoli, Alessandra; Tinguely, Regula; Lupo, Agnese; Perreten, Vincent; Endimiani, Andrea (2014). High Prevalence of Extended-Spectrum β-Lactamase, Plasmid-Mediated AmpC and Carbapenemase genes in Food for Pets. Antimicrobial agents and chemotherapy, 58(10), pp. 6320-6323. American Society for Microbiology 10.1128/AAC.03185-14
Seiffert, Salome N.; Tinguely, Regula; Lupo, Agnese; Neuwirth, Catherine; Perreten, Vincent; Endimiani, Andrea (2013). High prevalence of extended-spectrum-cephalosporin-resistant enterobacteriaceae in poultry meat in Switzerland: emergence of CMY-2- and VEB-6-possessing Proteus mirabilis. Antimicrobial agents and chemotherapy, 57(12), pp. 6406-6408. American Society for Microbiology 10.1128/AAC.01773-13
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Piezzi, Vanja; Wassilew, Nasstasja; Atkinson, Andrew; D'Incau, Stéphanie; Kaspar, Tanja; Seth-Smith, Helena MB; Casanova, Carlo; Bittel, Pascal; Jent, Philipp; Sommerstein, Rami; Buetti, Niccolò; Marschall, Jonas (2022). Nosocomial outbreak of vancomycin-resistant Enterococcus faecium (VRE) ST796, Switzerland, 2017 to 2020. Eurosurveillance, 27(48) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.48.2200285
Bächli, Magi; Sommerstein, Rami; Casanova, Carlo; Droz, Sara; Küffer, Marianne; Marschall, Jonas (2022). Meticillin-resistant Staphylococcus aureus Contact Screening Strategy in a Low Prevalence Setting; a Nested Case-Control Study. Infection prevention in practice, 4(2), p. 100211. Elsevier 10.1016/j.infpip.2022.100211
Seth-Smith, Helena M B; Biggel, Michael; Roloff, Tim; Hinic, Vladimira; Bodmer, Thomas; Risch, Martin; Casanova, Carlo; Widmer, Andreas; Sommerstein, Rami; Marschall, Jonas; Tschudin-Sutter, Sarah; Egli, Adrian (2021). Transition From PCR-Ribotyping to Whole Genome Sequencing Based Typing of Clostridioides difficile. Frontiers in cellular and infection microbiology, 11, p. 681518. Frontiers 10.3389/fcimb.2021.681518
Kuenzli, Andrea B.; Burri, Silvie; Casanova, Carlo; Sommerstein, Rami; Buetti, Niccolo; Seth-Smith, Helena Mb; Bodmer, Thomas; Egli, Adrian; Marschall, Jonas (2020). Successful Management of a Clostridioides difficile Ribotype 027 Outbreak with a Lean Intervention Bundle. The journal of hospital infection, 106(2), pp. 240-245. Elsevier 10.1016/j.jhin.2020.07.034
Seth-Smith, Helena M B; Casanova, Carlo; Sommerstein, Rami; Meinel, Dominik M; Abdelbary, Mohamed M H; Blanc, Dominique S; Droz, Sara; Führer, Urs; Lienhard, Reto; Lang, Claudia; Dubuis, Olivier; Schlegel, Matthias; Widmer, Andreas; Keller, Peter Markus; Marschall, Jonas; Egli, Adrian (2019). Phenotypic and Genomic Analyses of Burkholderia stabilis Clinical Contamination, Switzerland. Emerging infectious diseases, 25(6), pp. 1084-1092. U.S. National Center for Infectious Diseases 10.3201/eid2506.172119
Casanova, Carlo; Lo Priore, Elia; Egli, Adrian; Seth-Smith, Helena M B; Räber, Lorenz; Ott, Daniel; Pflüger, Valentin; Droz, Sara Christine; Marschall, Jonas; Sommerstein, Rami (2019). Agrobacterium spp. nosocomial outbreak assessment using rapid MALDI-TOF MS based typing, confirmed by whole genome sequencing. Antimicrobial resistance and infection control, 8, p. 171. BioMed Central 10.1186/s13756-019-0619-y
Wassilew, Nasstasja; Seth-Smith, Helena MB; Rolli, Eveline; Fietze, Yvonne; Casanova, Carlo; Führer, Urs; Egli, Adrian; Marschall, Jonas; Buetti, Niccolò Ivo Marco-Aurelio (2018). Outbreak of vancomycin-resistant Enterococcus faecium clone ST796, Switzerland, December 2017 to April 2018. Eurosurveillance, 23(29) European Centre for Disease Prevention and Control 10.2807/1560-7917.es.2018.23.29.1800351
Sommerstein, Rami; Führer, Urs; Lo Priore, Elia Francesco; Casanova, Carlo; Meinel, Dominik M; Seth-Smith, Helena Mb; Kronenberg, Andreas Oskar; Koch, Daniel; Senn, Laurence; Widmer, Andreas F; Egli, Adrian; Marschall, Jonas (2017). Burkholderia stabilis outbreak associated with contaminated commercially-available washing gloves, Switzerland, May 2015 to August 2016. Eurosurveillance, 22(49) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2017.22.49.17-00213
Frey, Pascal Marcel; Marti, Grischa Robert; Droz, Sara Christine; de Roche von Arx, Mirjam; Suter, Franziska Marta; Aujesky, Drahomir; Brugger, Silvio (2019). Bacterial colonization of handheld devices in a tertiary care setting: a hygiene intervention study. Antimicrobial Resistance and Infection Control, 8(97), p. 97. BioMed Central 10.1186/s13756-019-0546-y
Ernst, Alexander; Piragyte, Indre; MP, Ayisha Marwa; Le, Ngoc Dung; Grandgirard, Denis; Leib, Stephen L.; Oates, Andrew; Mercader, Nadia (2023). Identification of side effects of COVID-19 drug candidates on embryogenesis using an integrated zebrafish screening platform. Scientific reports, 13(1), p. 17037. Springer Nature 10.1038/s41598-023-43911-3
Campos-Madueno, Edgar I; Aldeia, Claudia; Perreten, Vincent; Sendi, Parham; Moser, Aline I; Endimiani, Andrea (2023). Detection of blaCTX-M and blaDHA genes in stool samples of healthy people: comparison of culture- and shotgun metagenomic-based approaches. Frontiers in Microbiology, 14(1236208), p. 1236208. Frontiers 10.3389/fmicb.2023.1236208
Moser, Aline I; Campos-Madueno, Edgar I; Perreten, Vincent; Endimiani, Andrea (2022). Genome stability during serial sub-culturing in hyperepidemic multidrug-resistant Klebsiella pneumoniae and Escherichia coli. Journal of global antimicrobial resistance, 31, pp. 152-161. Elsevier 10.1016/j.jgar.2022.08.014
Moser, Aline I.; Campos-Madueno, Edgar I.; Sendi, Parham; Perreten, Vincent; Keller, Peter M.; Ramette, Alban; Endimiani, Andrea (2021). Repatriation of a patient with COVID-19 contributed to the importation of an emerging carbapenemase producer. Journal of global antimicrobial resistance, 27, pp. 267-272. Elsevier 10.1016/j.jgar.2021.10.012
Campos-Madueno, Edgar I.; Moser, Aline I.; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Exploring the global spread of Klebsiella grimontii isolates possessing blaVIM-1 and mcr-9. Antimicrobial agents and chemotherapy, 65(9), e0072421. American Society for Microbiology 10.1128/AAC.00724-21
Moser, Aline; Campos-Madueno, Edgar Igor; Keller, Peter Michael; Endimiani, Andrea (2021). Complete Genome Sequence of a Third- and Fourth-Generation Cephalosporin-Resistant Comamonas kerstersii Isolate. Microbiology resource announcements, 10(28), e0039121. American Society for Microbiology 10.1128/MRA.00391-21
Moser, Aline I.; Viaggi, Valentina; Mauri, Carola; Carattoli, Alessandra; Luzzaro, Francesco; Endimiani, Andrea (2021). An XDR Proteus vulgaris isolate hosting a novel blaNDM-1- and armA-carrying plasmid. The journal of antimicrobial chemotherapy, 76(7), pp. 1938-1941. Oxford University Press 10.1093/jac/dkab111
Moser, Aline I.; Kuenzli, Esther; Büdel, Thomas; Campos-Madueno, Edgar I.; Bernasconi, Odette J.; DeCrom-Beer, Susan; Jakopp, Barbara; Mohammed, Ali Haji; Hassan, Nadir Khatib; Fehr, Jan; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2021). Travellers returning from the island of Zanzibar colonized with MDR Escherichia coli strains: assessing the impact of local people and other sources. The journal of antimicrobial chemotherapy, 76(2), pp. 330-337. Oxford University Press 10.1093/jac/dkaa457
Moser, Aline I.; Kuenzli, Esther; Campos-Madueno, Edgar I.; Büdel, Thomas; Rattanavong, Sayaphet; Vongsouvath, Manivanh; Hatz, Christoph; Endimiani, Andrea (2021). Antimicrobial-Resistant Escherichia coli Strains and Their Plasmids in People, Poultry, and Chicken Meat in Laos. Frontiers in Microbiology, 12 Frontiers 10.3389/fmicb.2021.708182
Moser, Aline I.; Keller, Peter M.; Campos-Madueno, Edgar I.; Poirel, Laurent; Nordmann, Patrice; Endimiani, Andrea (2021). A Patient With Multiple Carbapenemase Producers Including an Unusual Citrobacter sedlakii Hosting an IncC blaNDM-1- and armA-carrying Plasmid. Pathogens and Immunity, 6(2), pp. 119-134. Case Western Reserve University, Cleveland, OH 10.20411/pai.v6i2.482
Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20
Müller, Martin; Sägesser, Nadine; Keller, Peter M; Arampatzis, Spyridon; Steffens, Benedict; Ehrhard, Simone; Leichtle, Alexander B (2022). Urine Flow Cytometry Parameter Cannot Safely Predict Contamination of Urine-A Cohort Study of a Swiss Emergency Department Using Machine Learning Techniques. Diagnostics, 12(4) MDPI 10.3390/diagnostics12041008
Calzavarini, Sara; Brodard, Justine; Quarroz, Claudia; Maire, Livia; Nützi, Raphael; Jankovic, Jovana; Rotondo, Laura C; Giabbani, Evelyne; Fiedler, Georg Martin; Nagler, Michael; Angelillo-Scherrer, Anne (2019). Thrombin generation measurement using the ST Genesia Thrombin Generation System in a cohort of healthy adults: Normal values and variability. Research and practice in thrombosis and haemostasis, 3(4), pp. 758-768. Wiley 10.1002/rth2.12238
Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Endimiani, Andrea; Brilhante, Michael; Bernasconi, Odette J.; Perreten, Vincent; Schmidt, Janne S; Dazio, Valentina; Nigg, Aurélien; Gobeli Brawand, Stefanie; Kuster, Stefan P; Schuller, Simone; Willi, Barbara (2020). Employees of Swiss veterinary clinics colonized with epidemic clones of carbapenemase-producing Escherichia coli. Journal of antimicrobial chemotherapy, 75(3), pp. 766-768. Oxford University Press 10.1093/jac/dkz470
Pitton, Melissa; Valente, Luca G; Oberhaensli, Simone; Casanova, Carlo; Sendi, Parham; Schnegg, Bruno; Jakob, Stephan M; Cameron, David R; Que, Yok-Ai; Fürholz, Monika (2023). Dynamics of bacterial pathogens at the driveline exit site in patients with ventricular assist devices: a prospective, observational, single-centre cohort study. The Journal of heart and lung transplantation, 42(10), pp. 1445-1454. Elsevier 10.1016/j.healun.2023.05.016
Casanova, Carlo; Lo Priore, Elia; Egli, Adrian; Seth-Smith, Helena M B; Räber, Lorenz; Ott, Daniel; Pflüger, Valentin; Droz, Sara Christine; Marschall, Jonas; Sommerstein, Rami (2019). Agrobacterium spp. nosocomial outbreak assessment using rapid MALDI-TOF MS based typing, confirmed by whole genome sequencing. Antimicrobial resistance and infection control, 8, p. 171. BioMed Central 10.1186/s13756-019-0619-y
Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17
Oyewole, Oluwaseun Rume-Abiola; Lang, Phung; Albrich, Werner C.; Wissel, Kerstin; Leib, Stephen L.; Casanova, Carlo; Hilty, Markus (2021). The Impact of Pneumococcal Conjugate Vaccine (PCV) Coverage Heterogeneities on the Changing Epidemiology of Invasive Pneumococcal Disease in Switzerland, 2005–2019. Microorganisms, 9(5) MDPI 10.3390/microorganisms9051078
Werren, Joel P.; Troxler, Lukas J.; Oyewole, Oluwaseun Rume-Abiola; Ramette, Alban; Brugger, Silvio D.; Bruggmann, Rémy; van der Linden, Mark; Nahm, Moon H.; Gjuroski, Ilche; Casanova, Carlo; Furrer, Julien; Hilty, Markus (2021). Carbon Source-Dependent Changes of the Structure of Streptococcus pneumoniae Capsular Polysaccharide with Serotype 6F. International journal of molecular sciences, 22(9) MDPI 10.3390/ijms22094580
Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337
Campos-Madueno, Edgar I; Aldeia, Claudia; Perreten, Vincent; Sendi, Parham; Moser, Aline I; Endimiani, Andrea (2023). Detection of blaCTX-M and blaDHA genes in stool samples of healthy people: comparison of culture- and shotgun metagenomic-based approaches. Frontiers in Microbiology, 14(1236208), p. 1236208. Frontiers 10.3389/fmicb.2023.1236208
Moser, Aline I; Campos-Madueno, Edgar I; Perreten, Vincent; Endimiani, Andrea (2022). Genome stability during serial sub-culturing in hyperepidemic multidrug-resistant Klebsiella pneumoniae and Escherichia coli. Journal of global antimicrobial resistance, 31, pp. 152-161. Elsevier 10.1016/j.jgar.2022.08.014
Moser, Aline I.; Campos-Madueno, Edgar I.; Sendi, Parham; Perreten, Vincent; Keller, Peter M.; Ramette, Alban; Endimiani, Andrea (2021). Repatriation of a patient with COVID-19 contributed to the importation of an emerging carbapenemase producer. Journal of global antimicrobial resistance, 27, pp. 267-272. Elsevier 10.1016/j.jgar.2021.10.012
Endimiani, Andrea; Brilhante, Michael; Bernasconi, Odette J.; Perreten, Vincent; Schmidt, Janne S; Dazio, Valentina; Nigg, Aurélien; Gobeli Brawand, Stefanie; Kuster, Stefan P; Schuller, Simone; Willi, Barbara (2020). Employees of Swiss veterinary clinics colonized with epidemic clones of carbapenemase-producing Escherichia coli. Journal of antimicrobial chemotherapy, 75(3), pp. 766-768. Oxford University Press 10.1093/jac/dkz470
Bernasconi, Odette J.; Campos-Madueno, Edgar I.; Donà, Valentina; Perreten, Vincent; Carattoli, Alessandra; Endimiani, Andrea (2020). Investigating the Use of Bacteriophages as New Decolonization Strategy for Intestinal Carriage of CTX-M-15-producing ST131 Escherichia coli: An In Vitro Continuous Culture System Model. Journal of global antimicrobial resistance, 22, pp. 664-671. Elsevier 10.1016/j.jgar.2020.05.018
Schmidt, Janne S.; Kuster, Stefan P.; Nigg, Aurélien; Dazio, Valentina; Brilhante, Michael; Rohrbach, Helene; Bernasconi, Odette J.; Büdel, Thomas; Campos-Madueno, Edgar I.; Gobeli Brawand, Stefanie; Schuller, Simone; Endimiani, Andrea; Perreten, Vincent; Willi, Barbara (2020). Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics. Antimicrobial resistance and infection control, 9(1) BioMed Central 10.1186/s13756-020-00742-5
Bleichenbacher, Stephanie; Stevens, Marc J.A.; Zurfluh, Katrin; Perreten, Vincent; Endimiani, Andrea; Stephan, Roger; Nüesch-Inderbinen, Magdalena (2020). Environmental dissemination of carbapenemase-producing enterobacteriaceae in rivers in Switzerland. Environmental pollution, 265, p. 115081. Elsevier Science 10.1016/j.envpol.2020.115081
Clément, Mathieu; Büdel, Thomas; Bernasconi, Odette Joëlle; Principe, Luigi; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2018). The EDTA-based disk-combination tests are unreliable for the detection of MCR-mediated colistin-resistance in Enterobacteriaceae. Journal of microbiological methods, 153, pp. 31-34. Elsevier 10.1016/j.mimet.2018.08.008
Bernasconi, Odette Joëlle; Principe, Luigi; Tinguely, Regula; Karczmarek, Aneta; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2017). Evaluation of a New Commercial Microarray Platform for the Simultaneous Detection of β-Lactamase and Mcr-1/-2 Genes in Enterobacteriaceae. Journal of clinical microbiology, 55(10), pp. 3138-3141. American Society for Microbiology 10.1128/JCM.01056-17
Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4 (2017) 519-521]. International journal of antimicrobial agents, 50(2), p. 276. Elsevier 10.1016/j.ijantimicag.2017.05.002
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Kasraian Fard, Sara; Hilty, Markus; Perreten, Vincent; Endimiani, Andrea (2016). Intestinal colonisation with extended-spectrum cephalosporin-resistant Escherichia coli in Swiss pets: molecular features, risk factors and transmission with owners. International journal of antimicrobial agents, 48(6), pp. 759-760. Elsevier 10.1016/j.ijantimicag.2016.08.007
Bernasconi, Odette Joëlle; Kuenzli, Esther; Pires, João; Tinguely, Regula; Carattoli, Alessandra; Hatz, Christoph; Perreten, Vincent; Endimiani, Andrea (2016). Travelers Can Import Colistin-Resistant Enterobacteriaceae, Including Those Possessing the Plasmid-Mediated mcr-1 Gene. Antimicrobial agents and chemotherapy, 60(8), pp. 5080-5084. American Society for Microbiology 10.1128/AAC.00731-16
Seiffert, Salome Nadja; Carattoli, Alessandra; Tinguely, Regula; Lupo, Agnese; Perreten, Vincent; Endimiani, Andrea (2014). High Prevalence of Extended-Spectrum β-Lactamase, Plasmid-Mediated AmpC and Carbapenemase genes in Food for Pets. Antimicrobial agents and chemotherapy, 58(10), pp. 6320-6323. American Society for Microbiology 10.1128/AAC.03185-14
Seiffert, Salome N.; Tinguely, Regula; Lupo, Agnese; Neuwirth, Catherine; Perreten, Vincent; Endimiani, Andrea (2013). High prevalence of extended-spectrum-cephalosporin-resistant enterobacteriaceae in poultry meat in Switzerland: emergence of CMY-2- and VEB-6-possessing Proteus mirabilis. Antimicrobial agents and chemotherapy, 57(12), pp. 6406-6408. American Society for Microbiology 10.1128/AAC.01773-13
Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Piezzi, Vanja; Wassilew, Nasstasja; Atkinson, Andrew; D'Incau, Stéphanie; Kaspar, Tanja; Seth-Smith, Helena MB; Casanova, Carlo; Bittel, Pascal; Jent, Philipp; Sommerstein, Rami; Buetti, Niccolò; Marschall, Jonas (2022). Nosocomial outbreak of vancomycin-resistant Enterococcus faecium (VRE) ST796, Switzerland, 2017 to 2020. Eurosurveillance, 27(48) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.48.2200285
Ernst, Alexander; Piragyte, Indre; MP, Ayisha Marwa; Le, Ngoc Dung; Grandgirard, Denis; Leib, Stephen L.; Oates, Andrew; Mercader, Nadia (2023). Identification of side effects of COVID-19 drug candidates on embryogenesis using an integrated zebrafish screening platform. Scientific reports, 13(1), p. 17037. Springer Nature 10.1038/s41598-023-43911-3
Pitton, Melissa; Valente, Luca G; Oberhaensli, Simone; Casanova, Carlo; Sendi, Parham; Schnegg, Bruno; Jakob, Stephan M; Cameron, David R; Que, Yok-Ai; Fürholz, Monika (2023). Dynamics of bacterial pathogens at the driveline exit site in patients with ventricular assist devices: a prospective, observational, single-centre cohort study. The Journal of heart and lung transplantation, 42(10), pp. 1445-1454. Elsevier 10.1016/j.healun.2023.05.016
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Pitton, Melissa; Valente, Luca G; Oberhaensli, Simone; Casanova, Carlo; Sendi, Parham; Schnegg, Bruno; Jakob, Stephan M; Cameron, David R; Que, Yok-Ai; Fürholz, Monika (2023). Dynamics of bacterial pathogens at the driveline exit site in patients with ventricular assist devices: a prospective, observational, single-centre cohort study. The Journal of heart and lung transplantation, 42(10), pp. 1445-1454. Elsevier 10.1016/j.healun.2023.05.016
Endimiani, Andrea; Brilhante, Michael; Bernasconi, Odette J.; Perreten, Vincent; Schmidt, Janne S; Dazio, Valentina; Nigg, Aurélien; Gobeli Brawand, Stefanie; Kuster, Stefan P; Schuller, Simone; Willi, Barbara (2020). Employees of Swiss veterinary clinics colonized with epidemic clones of carbapenemase-producing Escherichia coli. Journal of antimicrobial chemotherapy, 75(3), pp. 766-768. Oxford University Press 10.1093/jac/dkz470
Schmidt, Janne S.; Kuster, Stefan P.; Nigg, Aurélien; Dazio, Valentina; Brilhante, Michael; Rohrbach, Helene; Bernasconi, Odette J.; Büdel, Thomas; Campos-Madueno, Edgar I.; Gobeli Brawand, Stefanie; Schuller, Simone; Endimiani, Andrea; Perreten, Vincent; Willi, Barbara (2020). Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics. Antimicrobial resistance and infection control, 9(1) BioMed Central 10.1186/s13756-020-00742-5
Raemy, Samuel; Casanova, Carlo; Baldan, Rossella; Barreto, Erin; Tande, Aaron J; Endimiani, Andrea; Leib, Stephen L; Fischer, Urs; Sendi, Parham (2023). Penicillin-Susceptible Streptococcus pneumoniae Meningitis in Adults: Does the Ceftriaxone Dosing Matter? Antibiotics, 12(5) MDPI 10.3390/antibiotics12050878
Kofler, Jacob; Ramette, Alban; Iseli, Patricia; Stauber, Lea; Fichtner, Jens; Droz, Sara; Zihler Berner, Annina; Meier, Anna Bettina; Begert, Michelle; Negri, Sabine; Jachmann, Anne; Keller, Peter Michael; Staehelin, Cornelia; Grützmacher, Barbara (2022). Ongoing toxin-positive diphtheria outbreaks in a federal asylum centre in Switzerland, analysis July to September 2022. Eurosurveillance, 27(44) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.44.2200811
Moser, Aline I.; Campos-Madueno, Edgar I.; Sendi, Parham; Perreten, Vincent; Keller, Peter M.; Ramette, Alban; Endimiani, Andrea (2021). Repatriation of a patient with COVID-19 contributed to the importation of an emerging carbapenemase producer. Journal of global antimicrobial resistance, 27, pp. 267-272. Elsevier 10.1016/j.jgar.2021.10.012
Werren, Joel P.; Troxler, Lukas J.; Oyewole, Oluwaseun Rume-Abiola; Ramette, Alban; Brugger, Silvio D.; Bruggmann, Rémy; van der Linden, Mark; Nahm, Moon H.; Gjuroski, Ilche; Casanova, Carlo; Furrer, Julien; Hilty, Markus (2021). Carbon Source-Dependent Changes of the Structure of Streptococcus pneumoniae Capsular Polysaccharide with Serotype 6F. International journal of molecular sciences, 22(9) MDPI 10.3390/ijms22094580
Endimiani, Andrea; Ramette, Alban; Rhoads, Daniel D.; Jacobs, Michael R. (2020). The Evolving Role of the Clinical Microbiology Laboratory in Identifying Resistance in Gram-Negative Bacteria: An Update. Infectious disease clinics of North America, 34(4), pp. 659-676. Elsevier 10.1016/j.idc.2020.08.001
Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17
Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4 (2017) 519-521]. International journal of antimicrobial agents, 50(2), p. 276. Elsevier 10.1016/j.ijantimicag.2017.05.002
Reichmuth, Martina L.; Hömke, Rico; Zürcher, Kathrin; Sander, Peter; Avihingsanon, Anchalee; Collantes, Jimena; Loiseau, Chloé; Borrell, Sonia; Reinhard, Miriam; Wilkinson, Robert J; Yotebieng, Marcel; Fenner, Lukas; Böttger, Erik C; Gagneux, Sebastien; Egger, Matthias; Keller, Peter Michael (2020). Natural Polymorphisms in Mycobacterium tuberculosis Conferring Resistance to Delamanid in Drug-naïve Patients. Antimicrobial agents and chemotherapy, 64(11), e00513-20. American Society for Microbiology 10.1128/AAC.00513-20
Pires, João; Siriwardena, Thissa N.; Stach, Michaela; Tinguely, Regula; Kasraian Fard, Sara; Luzzaro, Francesco; Leib, Stephen; Darbre, Tamis; Reymond, Jean-Louis; Endimiani, Andrea (2015). In Vitro Activity of the Novel Antimicrobial Peptide Dendrimer G3KL against Multidrug-Resistant Acinetobacter baumannii and Pseudomonas aeruginosa. Antimicrobial agents and chemotherapy, 59(12), pp. 7915-7918. American Society for Microbiology 10.1128/AAC.01853-15
Schmidt, Janne S.; Kuster, Stefan P.; Nigg, Aurélien; Dazio, Valentina; Brilhante, Michael; Rohrbach, Helene; Bernasconi, Odette J.; Büdel, Thomas; Campos-Madueno, Edgar I.; Gobeli Brawand, Stefanie; Schuller, Simone; Endimiani, Andrea; Perreten, Vincent; Willi, Barbara (2020). Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics. Antimicrobial resistance and infection control, 9(1) BioMed Central 10.1186/s13756-020-00742-5
Ruppen, Corinne; Fröhlicher, Simone; Sendi, Parham (2017). Gentamicin susceptibility of 567 clinical group B streptococcal isolates. Journal of global antimicrobial resistance, 10, pp. 304-305. Elsevier 10.1016/j.jgar.2017.07.005
Ruppen, Corinne; Rasmussen, Magnus; Casanova, Carlo; Sendi, Parham (2017). A 10-year observational study of Streptococcus dysgalactiae bacteraemia in adults: frequent occurrence among female intravenous drug users. Swiss medical weekly, 147(w14469), w14469. EMH Schweizerischer Ärzteverlag 10.4414/smw.2017.14469
Casanova, Carlo; Lo Priore, Elia; Egli, Adrian; Seth-Smith, Helena M B; Räber, Lorenz; Ott, Daniel; Pflüger, Valentin; Droz, Sara Christine; Marschall, Jonas; Sommerstein, Rami (2019). Agrobacterium spp. nosocomial outbreak assessment using rapid MALDI-TOF MS based typing, confirmed by whole genome sequencing. Antimicrobial resistance and infection control, 8, p. 171. BioMed Central 10.1186/s13756-019-0619-y
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
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Pires, João; Siriwardena, Thissa N.; Stach, Michaela; Tinguely, Regula; Kasraian Fard, Sara; Luzzaro, Francesco; Leib, Stephen; Darbre, Tamis; Reymond, Jean-Louis; Endimiani, Andrea (2015). In Vitro Activity of the Novel Antimicrobial Peptide Dendrimer G3KL against Multidrug-Resistant Acinetobacter baumannii and Pseudomonas aeruginosa. Antimicrobial agents and chemotherapy, 59(12), pp. 7915-7918. American Society for Microbiology 10.1128/AAC.01853-15
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Sommerstein, Rami; Führer, Urs; Lo Priore, Elia Francesco; Casanova, Carlo; Meinel, Dominik M; Seth-Smith, Helena Mb; Kronenberg, Andreas Oskar; Koch, Daniel; Senn, Laurence; Widmer, Andreas F; Egli, Adrian; Marschall, Jonas (2017). Burkholderia stabilis outbreak associated with contaminated commercially-available washing gloves, Switzerland, May 2015 to August 2016. Eurosurveillance, 22(49) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2017.22.49.17-00213
Pires, João; Siriwardena, Thissa N.; Stach, Michaela; Tinguely, Regula; Kasraian Fard, Sara; Luzzaro, Francesco; Leib, Stephen; Darbre, Tamis; Reymond, Jean-Louis; Endimiani, Andrea (2015). In Vitro Activity of the Novel Antimicrobial Peptide Dendrimer G3KL against Multidrug-Resistant Acinetobacter baumannii and Pseudomonas aeruginosa. Antimicrobial agents and chemotherapy, 59(12), pp. 7915-7918. American Society for Microbiology 10.1128/AAC.01853-15
Kofler, Jacob; Ramette, Alban; Iseli, Patricia; Stauber, Lea; Fichtner, Jens; Droz, Sara; Zihler Berner, Annina; Meier, Anna Bettina; Begert, Michelle; Negri, Sabine; Jachmann, Anne; Keller, Peter Michael; Staehelin, Cornelia; Grützmacher, Barbara (2022). Ongoing toxin-positive diphtheria outbreaks in a federal asylum centre in Switzerland, analysis July to September 2022. Eurosurveillance, 27(44) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.44.2200811
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Clément, Mathieu; Keller, Peter Michael; Bernasconi, Odette Joëlle; Stirnimann, Guido; Frey, Pascal M.; Bloemberg, Guido V.; Sendi, Parham; Endimiani, Andrea (2019). First Clinical Case of In Vivo Acquisition of DHA-1 plasmid-mediated AmpC in a Salmonella enterica subsp. enterica Isolate. Antimicrobial agents and chemotherapy, 63(10) American Society for Microbiology 10.1128/AAC.00992-19
Kröll, Dino; Erdem, Suna; Noser, L; Arnold, D; Storni, Federico Lorenzo; Dislich, Bastian; Langer, D; Candinas, Daniel; Seiler, Christian A. (June 2016). Evolving concepts and outcome in esophageal cancer surgery- a single center experience from the past to present (Unpublished). In: Jahreskongress der Schweizerischen Gesellschaft für Chirurgie. Lugano. 01.-03.06.2016.
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Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Frey, Pascal Marcel; Marti, Grischa Robert; Droz, Sara Christine; de Roche von Arx, Mirjam; Suter, Franziska Marta; Aujesky, Drahomir; Brugger, Silvio (2019). Bacterial colonization of handheld devices in a tertiary care setting: a hygiene intervention study. Antimicrobial Resistance and Infection Control, 8(97), p. 97. BioMed Central 10.1186/s13756-019-0546-y
Bograd, Alexandra; Seiler, Günter Theodor Michael; Droz, Sara Christine; Zimmerli, Stefan; Früh Epstein, Beatrice; Tappeiner, Christoph (2019). Bacterial and Fungal Keratitis: A Retrospective Analysis at a University Hospital in Switzerland. Klinische Monatsblätter für Augenheilkunde, 236(4), pp. 358-365. Thieme 10.1055/a-0774-7756
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Pires, João; Kuenzli, Esther; Kasraian Fard, Sara; Tinguely, Regula; Furrer, Hansjakob; Hilty, Markus; Hatz, Christoph; Endimiani, Andrea (2016). Polyclonal Intestinal Colonization with Extended-Spectrum Cephalosporin-Resistant Enterobacteriaceae upon Traveling to India. Frontiers in Microbiology, 7(1069), p. 1069. Frontiers 10.3389/fmicb.2016.01069
Bernasconi, Odette Joëlle; Kuenzli, Esther; Pires, João; Tinguely, Regula; Carattoli, Alessandra; Hatz, Christoph; Perreten, Vincent; Endimiani, Andrea (2016). Travelers Can Import Colistin-Resistant Enterobacteriaceae, Including Those Possessing the Plasmid-Mediated mcr-1 Gene. Antimicrobial agents and chemotherapy, 60(8), pp. 5080-5084. American Society for Microbiology 10.1128/AAC.00731-16
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Seiffert, Salome Nadja; Carattoli, Alessandra; Tinguely, Regula; Lupo, Agnese; Perreten, Vincent; Endimiani, Andrea (2014). High Prevalence of Extended-Spectrum β-Lactamase, Plasmid-Mediated AmpC and Carbapenemase genes in Food for Pets. Antimicrobial agents and chemotherapy, 58(10), pp. 6320-6323. American Society for Microbiology 10.1128/AAC.03185-14
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Wassilew, Nasstasja; Seth-Smith, Helena MB; Rolli, Eveline; Fietze, Yvonne; Casanova, Carlo; Führer, Urs; Egli, Adrian; Marschall, Jonas; Buetti, Niccolò Ivo Marco-Aurelio (2018). Outbreak of vancomycin-resistant Enterococcus faecium clone ST796, Switzerland, December 2017 to April 2018. Eurosurveillance, 23(29) European Centre for Disease Prevention and Control 10.2807/1560-7917.es.2018.23.29.1800351
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Kofler, Jacob; Ramette, Alban; Iseli, Patricia; Stauber, Lea; Fichtner, Jens; Droz, Sara; Zihler Berner, Annina; Meier, Anna Bettina; Begert, Michelle; Negri, Sabine; Jachmann, Anne; Keller, Peter Michael; Staehelin, Cornelia; Grützmacher, Barbara (2022). Ongoing toxin-positive diphtheria outbreaks in a federal asylum centre in Switzerland, analysis July to September 2022. Eurosurveillance, 27(44) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.44.2200811
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Reichmuth, Martina L.; Hömke, Rico; Zürcher, Kathrin; Sander, Peter; Avihingsanon, Anchalee; Collantes, Jimena; Loiseau, Chloé; Borrell, Sonia; Reinhard, Miriam; Wilkinson, Robert J; Yotebieng, Marcel; Fenner, Lukas; Böttger, Erik C; Gagneux, Sebastien; Egger, Matthias; Keller, Peter Michael (2020). Natural Polymorphisms in Mycobacterium tuberculosis Conferring Resistance to Delamanid in Drug-naïve Patients. Antimicrobial agents and chemotherapy, 64(11), e00513-20. American Society for Microbiology 10.1128/AAC.00513-20
Krämer, Julia; Do Couto Pires, Joao Pedro; Küffer, Marianne; Semaani, Eulalia; Endimiani, Andrea; Hilty, Markus; Oppliger, Anne (2017). Prevalence of extended-spectrum β-lactamase-producing Enterobacteriaceae and Methicillin-Resistant Staphylococcus aureus in pig farms in Switzerland. The Science of the total environment, 603-604, pp. 401-405. Elsevier 10.1016/j.scitotenv.2017.06.110
Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17
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