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Number of items at this level: 1207.

2024

Banholzer, Nicolas; Bittel, Pascal; Jent, Philipp; Furrer, Lavinia; Zürcher, Kathrin; Egger, Matthias; Hascher, Tina; Fenner, Lukas (2024). Molecular detection of SARS-CoV-2 and other respiratory viruses in saliva and classroom air: a two winters tale. (In Press). Clinical microbiology and infection Elsevier 10.1016/j.cmi.2024.03.002

Boehm, Erik; Summermatter, Kathrin; Kaiser, Laurent (2024). Orthopox viruses: is the threat growing? (In Press). Clinical microbiology and infection Elsevier 10.1016/j.cmi.2024.02.011

Manuel, Oriol; Laager, Mirjam; Hirzel, Cédric; Neofytos, Dionysios; Walti, Laura N; Hoenger, Gideon; Binet, Isabelle; Schnyder, Aurelia; Stampf, Susanne; Koller, Michael; Mombelli, Matteo; Kim, Min Jeong; Hoffmann, Matthias; Koenig, Katrin; Hess, Christoph; Burgener, Anne-Valérie; Cippà, Pietro E; Hübel, Kerstin; Mueller, Thomas F; Sidler, Daniel; ... (2024). Immune monitoring-guided vs fixed duration of antiviral prophylaxis against cytomegalovirus in solid-organ transplant recipients. A Multicenter, Randomized Clinical Trial. Clinical infectious diseases, 78(2), pp. 312-323. Oxford University Press 10.1093/cid/ciad575

Begré, Lorin; Boyd, Anders; Salazar-Vizcaya, Luisa; Suter, Franziska; Béguelin, Charles; Rockstroh, Jürgen K; Günthard, Huldrych F; Calmy, Alexandra; Cavassini, Matthias; Stöckle, Marcel; Schmid, Patrick; Bernasconi, Enos; Levrero, Massimo; Zoulim, Fabien; Wandeler, Gilles; Rauch, Andri (2024). Long-term quantitative hepatitis B surface antigen (HBsAg) trajectories in persons with and without HBsAg loss on tenofovir-containing antiretroviral therapy. HIV medicine, 25(2), pp. 291-298. Wiley 10.1111/hiv.13561

Gloor, Severin; Jiang, Wanjie; Maurer, Martin H; Gottstein, Bruno; Oberli, Alexander Oliver; Hagemann, Jürgen B; Hotz, Julian F; Candinas, Daniel; Lachenmayer, Anja; Grüner, Beate; Beldi, Guido (2024). The trajectory of anti-recEm18 antibody levels determines follow-up after curative resection of hepatic alveolar echinococcosis. HPB : the official journal of the International Hepato Pancreato Biliary Association, 26(2), pp. 224-233. Elsevier 10.1016/j.hpb.2023.10.007

Blacksell, Stuart D; Dhawan, Sandhya; Kusumoto, Marina; Le, Khanh K; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph P; Almuhairi, Salama S; Sendow, Indrawati; Scheel, Christina M; Ahumibe, Anthony; Masuku, Zibusiso M; Bennett, Allan M; Kojima, Kazunobu; Harper, David R; Hamilton, Keith (2024). Laboratory-acquired infections and pathogen escapes worldwide between 2000 and 2021: a scoping review. The Lancet Microbe, 5(2), e194-e202. Elsevier 10.1016/S2666-5247(23)00319-1

Vergidis, Paschalis; Sendi, Parham; Alkhateeb, Hassan; Nguyen, M Hong (2024). How Do I Manage Refractory Invasive Pulmonary Aspergillosis. (In Press). Clinical microbiology and infection Elsevier 10.1016/j.cmi.2024.01.015

El Zein, Said; Berbari, Elie F; Passerini, Matteo; Petri, Francesco; Maamari, Julian; Murad, M Hassan; Sendi, Parham; Tande, Aaron J (2024). Rifampin Based Therapy for Patients with Staphylococcus aureus Native Vertebral Osteomyelitis: A Systematic Review and Meta-Analysis. Clinical infectious diseases, 78(1), pp. 40-47. Oxford University Press 10.1093/cid/ciad560

Santoro, Azzurra; Santolamazza, Federica; Cacciò, Simone M; La Rosa, Giuseppe; Antolová, Daniela; Auer, Herbert; Bagrade, Guna; Bandelj, Petra; Basso, Walter; Beck, Relja; Citterio, Carlo V; Davidson, Rebecca K; Deksne, Gunita; Frey, Caroline F; Fuglei, Eva; Glawischnig, Walter; Gottstein, Bruno; Harna, Jiří; Huus Petersen, Heidi; Karamon, Jacek; ... (2024). Mitochondrial genetic diversity and phylogenetic relationships of Echinococcus multilocularis in Europe. (In Press). International journal for parasitology Elsevier 10.1016/j.ijpara.2024.01.003

Abela, Irene A; Hauser, Anthony; Schwarzmüller, Magdalena; Pasin, Chloé; Kusejko, Katharina; Epp, Selina; Cavassini, Matthias; Battegay, Manuel; Rauch, Andri; Calmy, Alexandra; Notter, Julia; Bernasconi, Enos; Fux, Christoph A; Leuzinger, Karoline; Perreau, Matthieu; Ramette, Alban; Gottschalk, Jochen; Schindler, Eméry; Wepf, Alexander; Marconato, Maddalena; ... (2024). Deciphering factors linked with reduced SARS-CoV-2 susceptibility in the Swiss HIV Cohort Study. (In Press). The journal of infectious diseases Oxford University Press 10.1093/infdis/jiae002

Manna, Sam; Werren, Joel P; Ortika, Belinda D; Bellich, Barbara; Pell, Casey L; Nikolaou, Elissavet; Gjuroski, Ilche; Lo, Stephanie; Hinds, Jason; Tundev, Odgerel; Dunne, Eileen M; Gessner, Bradford D; Bentley, Stephen D; Russell, Fiona M; Mulholland, E Kim; Mungun, Tuya; von Mollendorf, Claire; Licciardi, Paul V; Cescutti, Paola; Ravenscroft, Neil; ... (2024). Streptococcus pneumoniae serotype 33G: genetic, serological, and structural analysis of a new capsule type. Microbiology spectrum, 12(1), e0357923. American Society for Microbiology 10.1128/spectrum.03579-23

Terrazos Miani, Miguel A; Borcard, Loïc; Gempeler, Sonja; Baumann, Christian; Bittel, Pascal; Leib, Stephen L; Neuenschwander, Stefan; Ramette, Alban Nicolas (2024). NASCarD (Nanopore Adaptive Sampling with Carrier DNA): A Rapid, PCR-Free Method for SARS-CoV-2 Whole-Genome Sequencing in Clinical Samples. Pathogens, 13(1) MDPI AG 10.3390/pathogens13010061

Bai, Xiaopeng; De Palma, Giada; Boschetti, Elisa; Nishihara, Yuichiro; Lu, Jun; Shimbori, Chiko; Costanzini, Anna; Saqib, Zarwa; Kraimi, Narjis; Sidani, Sacha; Hapfelmeier, Siegfried; Macpherson, Andrew J; Verdu, Elena F; De Giorgio, Roberto; Collins, Stephen M; Bercik, Premysl (2024). Vasoactive intestinal polypeptide plays a key role in the microbial-neuroimmune control of intestinal motility. Cellular and molecular gastroenterology and hepatology, 17(3), pp. 383-398. Elsevier 10.1016/j.jcmgh.2023.11.012

Abbuehl, Lena S; Branca, Mattia; Ungureanu, Anamaria; Federspiel, Andrea; Leib, Stephen L; Bassetti, Claudio L. A.; Hakim, Arsany; Dietmann, Anelia (2024). Magnetic resonance imaging in acute meningoencephalitis of viral and unknown origin: frequent findings and prognostic potential. Frontiers in neurology, 15 Frontiers Media S.A. 10.3389/fneur.2024.1359437

Kronenberg, Andreas; Gasser, Michael; Plüss-Suard, Catherine; Friedli, Olivier; Leib, Stephen (2024). Für einen besseren Umgang mit Antibiotika. Schweizerische Ärztezeitung, 105(04), pp. 29-33. EMH Schweizerischer Ärzteverlag AG 10.4414/saez.2024.1288111951

2023

Oliver, Antonio; Rojo-Molinero, Estrella; Arca-Suarez, Jorge; Beşli, Yeşim; Bogaerts, Pierre; Cantón, Rafael; Cimen, Cansu; Croughs, Peter D; Denis, Olivier; Giske, Christian G; Graells, Tíscar; Daniel Huang, Te-Din; Iorga, Bogdan I; Karatuna, Onur; Kocsis, Béla; Kronenberg, Andreas; López-Causapé, Carla; Malhotra-Kumar, Surbhi; Martínez, Luis Martínez; Mazzariol, Annarita; ... (2023). Pseudomonas aeruginosa antimicrobial susceptibility profiles, resistance mechanisms and international clonal lineages: update from ESGARS-ESCMID/ISARPAE Group. (In Press). Clinical microbiology and infection Elsevier 10.1016/j.cmi.2023.12.026

Banholzer, Nicolas; Jent, Philipp; Bittel, Pascal; Zürcher, Kathrin; Furrer, Lavinia; Bertschinger, Simon; Weingartner, Ernest; Ramette, Alban; Egger, Matthias; Hascher, Tina; Fenner, Lukas (30 December 2023). Air cleaners and respiratory infections in schools: A modeling study using epidemiological, environmental, and molecular data. medRxiv 10.1101/2023.12.29.23300635

Mostacci, Nadja; Wüthrich, Tsering Monika; Siegwald, Léa; Kieser, Silas; Steinberg, Ruth; Sakwinska, Olga; Latzin, Philipp; Korten, Insa; Hilty, Markus (2023). Informed interpretation of metagenomic data by StrainPhlAn enables strain retention analyses of the upper airway microbiome. mSystems, 8(6), e0072423. American Society for Microbiology 10.1128/msystems.00724-23

Burz, Sebastian Dan; Causevic, Senka; Dal Co, Alma; Dmitrijeva, Marija; Engel, Philipp; Garrido-Sanz, Daniel; Greub, Gilbert; Hapfelmeier, Siegfried; Hardt, Wolf-Dietrich; Hatzimanikatis, Vassily; Heiman, Clara Margot; Herzog, Mathias Klaus-Maria; Hockenberry, Alyson; Keel, Christoph; Keppler, Andreas; Lee, Soon-Jae; Luneau, Julien; Malfertheiner, Lukas; Mitri, Sara; Ngyuen, Bidong; ... (2023). From microbiome composition to functional engineering, one step at a time. Microbiology and molecular biology reviews, 87(4), e0006323. American Society for Microbiology 10.1128/mmbr.00063-23

Kundlacz, Cindy; Aldeia, Claudia; Eddoubaji, Yasmine; Campos-Madueno, Edgar I; Endimiani, Andrea (2023). A new OCH β-lactamase from a Brucella pseudintermedia (Ochrobactrum intermedium) strain isolated from Zophobas morio larvae. (In Press). Journal of global antimicrobial resistance, 36, pp. 65-69. Elsevier 10.1016/j.jgar.2023.12.012

Thormann, Wolfgang; Mosher, Richard A (2023). Mobilization in two-step capillary isoelectric focusing: Concepts assessed by computer simulation. (In Press). Electrophoresis Wiley-VCH 10.1002/elps.202300218

Probst, Lukas; Laloli, Laura; Licheri, Manon Flore; Licheri, Matthias; Gultom, Mitra; Holwerda, Melle; V'kovski, Philip; Dijkman, Ronald (2023). Generation and Characterization of an Influenza D Reporter Virus. Viruses, 15(12), p. 2444. Molecular Diversity Preservation International MDPI 10.3390/v15122444

Bugnon, Quentin; Melendez, Camilo; Desiatkina, Oksana; Fayolle de Chaptes, Louis; Holzer, Isabelle; Păunescu, Emilia; Hilty, Markus; Furrer, Julien (2023). In vitro antibacterial activity of dinuclear thiolato-bridged ruthenium(II)-arene compounds. Microbiology spectrum, 11(6), e0095423. American Society for Microbiology 10.1128/spectrum.00954-23

Tandon, Disha; Dong, Yuan; Hapfelmeier, Siegfried Hektor (5 December 2023). Pipeline for species-resolved full-length16S rRNA amplicon nanopore sequencing analysis of low-complexity bacterial microbiota (BioRxiv). Cold Spring Harbor Laboratory 10.1101/2023.12.05.570138

Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337

Meier, Caroline S; Pagni, Marco; Richard, Sophie; Mühlethaler, Konrad; Almeida, João M G C F; Nevez, Gilles; Cushion, Melanie T; Calderón, Enrique J; Hauser, Philippe M (2023). Publisher Correction: Fungal antigenic variation using mosaicism and reassortment of subtelomeric genes' repertoires. Nature communications, 14(1), p. 7928. Nature Publishing Group 10.1038/s41467-023-43993-7

Blacksell, Stuart D; Dhawan, Sandhya; Kusumoto, Marina; Le, Kim Khanh; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph; Almuhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M; Ahumibe, Anthony; Masuku, Zibusiso M; Bennett, Allan M; Kojima, Kazunobu; Harper, David R; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in the Laboratory-Foot and Mouth Disease Virus. Applied Biosafety, 28(4), pp. 199-215. Sage 10.1089/apb.2022.0041

Meier, Caroline S; Pagni, Marco; Richard, Sophie; Mühlethaler, Konrad; Almeida, João M G C F; Nevez, Gilles; Cushion, Melanie T; Calderón, Enrique J; Hauser, Philippe M (2023). Fungal antigenic variation using mosaicism and reassortment of subtelomeric genes' repertoires. Nature communications, 14(1), p. 7026. Nature Publishing Group 10.1038/s41467-023-42685-6

Blacksell, Stuart D; Summermatter, Kathrin; Masuku, Zibusiso M; Kojima, Kazunobu; Ross, Emma; Harper, David R; Hamilton, Keith (2023). Investment in biosafety and biosecurity: the need for a risk-based approach and systematic reporting of laboratory accidents to mitigate laboratory-acquired infections and pathogen escapes. The Lancet Microbe, 4(11), e854-e855. Elsevier 10.1016/S2666-5247(23)00288-4

Pitton, Melissa; Valente, Luca G; Oberhaensli, Simone; Casanova, Carlo; Sendi, Parham; Schnegg, Bruno; Jakob, Stephan M; Cameron, David R; Que, Yok-Ai; Fürholz, Monika (2023). Dynamics of bacterial pathogens at the driveline exit site in patients with ventricular assist devices: a prospective, observational, single-centre cohort study. The Journal of heart and lung transplantation, 42(10), pp. 1445-1454. Elsevier 10.1016/j.healun.2023.05.016

Yokoe, Deborah S; Advani, Sonali D; Anderson, Deverick J; Babcock, Hilary M; Bell, Michael; Berenholtz, Sean M; Bryant, Kristina A; Buetti, Niccolò; Calderwood, Michael S; Calfee, David P; Deloney, Valerie M; Dubberke, Erik R; Ellingson, Katherine D; Fishman, Neil O; Gerding, Dale N; Glowicz, Janet; Hayden, Mary K; Kaye, Keith S; Kociolek, Larry K; Landon, Emily; ... (2023). Introduction to A Compendium of Strategies to Prevent Healthcare-Associated Infections In Acute-Care Hospitals: 2022 Updates. Infection control and hospital epidemiology, 44(10), pp. 1533-1539. 10.1017/ice.2023.158

Schimanski, Bernd; Kräuchi, Rahel; Stettler, Jolanda; Lejon Crottet, Sofia; Niederhauser, Christoph; Clausen, Frederik Banch; Fontana, Stefano; Hodel, Markus; Amylidi-Mohr, Sofia; Raio, Luigi; Abbal, Claire; Henny, Christine (2023). Fetal RHD Screening in RH1 Negative Pregnant Women: Experience in Switzerland. Biomedicines, 11(10) MDPI 10.3390/biomedicines11102646

Scheier, T C; Franz, J; Boumasmoud, M; Andreoni, F; Chakrakodi, B; Duvnjak, B; Egli, A; Zingg, W; Ramette, A; Wolfensberger, A; Kouyos, R D; Brugger, S D (2023). Fourier-transform infrared spectroscopy for typing of vancomycin-resistant Enterococcus faecium: performance analysis and outbreak investigation. (In Press). Microbiology spectrum, 11(5), e0098423. American Society for Microbiology 10.1128/spectrum.00984-23

Fontana, Stefano; Ripellino, Paolo; Niederhauser, Christoph; Widmer, Nadja; Gowland, Peter; Petrini, Orlando; Aprile, Manuela; Merlani, Giorgio; Bihl, Florian (2023). Epidemiology of HEV Infection in Blood Donors in Southern Switzerland. Microorganisms, 11(10) MDPI 10.3390/microorganisms11102375

Endimiani, Andrea (21 September 2023). Antibiotic Resistance in a One-Health Concept (Unpublished). In: Symposium Emerging Antibiotic Resistance 2023. Fribourg. 21.09.2023.

Haddad, Sara F; Lahr, Brian D; Patarroyo, Sebastian Santos; Chesdachai, Supavit; Kies, Kami D; O'Horo, John C; DeSimone, Daniel C; Sendi, Parham; Baddour, Larry M (2023). Bloodstream Infection Due to Coagulase-Negative Staphylococci: Impact of Species on Prevalence of Infective Endocarditis. Antibiotics, 12(9) MDPI 10.3390/antibiotics12091453

Hartnack, Sonja; Nilius, Henning; Jegerlehner, Sabrina; Suter-Riniker, Franziska; Bittel, Pascal; Jent, Philipp; Nagler, Michael (2023). Determination of the Diagnostic Performance of Laboratory Tests in the Absence of a Perfect Reference Standard: The Case of SARS-CoV-2 Tests. Diagnostics, 13(18) MDPI 10.3390/diagnostics13182892

Renggli, L; Plüss-Suard, C; Gasser, M; Sonderegger, B; Kronenberg, A (2023). Assessing the conversion of electronic medical record data into antibiotic stewardship indicators. The journal of antimicrobial chemotherapy, 78(9), pp. 2297-2305. Oxford University Press 10.1093/jac/dkad235

Paulo, A Cristina; Lança, João; Almeida, Sónia T; Hilty, Markus; Sá-Leão, Raquel (2023). The upper respiratory tract microbiota of healthy adults is affected by Streptococcus pneumoniae carriage, smoking habits, and contact with children. Microbiome, 11(1), p. 199. BioMed Central 10.1186/s40168-023-01640-9

Blacksell, Stuart D; Dhawan, Sandhya; Kusumoto, Marina; Khanh Le, Kim; Summermatter, Katharina; O'Keefe, Joseph; Kozlovac, Joseph; Al Muhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M; Ahumibe, Anthony; Masuku, Zibusiso M; Bennett, Allan M; Kojima, Kazunobu; Harper, David R; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in the Laboratory-Mpox/Monkeypox Virus. Applied Biosafety, 28(3), pp. 152-161. Mary Ann Liebert 10.1089/apb.2022.0045

Sendi, Parham; Lora-Tamayo, Jaime; Cortes-Penfield, Nicolas W; Uçkay, Ilker (2023). Early switch from IV to oral antibiotic treatment in bone and joint infections. Clinical microbiology and infection, 29(9), pp. 1133-1138. Elsevier 10.1016/j.cmi.2023.05.008

Sendi, Parham; Nelson, Sandra Bliss; Soriano, Alex; Spellberg, Brad (2023). Early switch from IV to oral antimicrobial therapy in infectious diseases. Clinical microbiology and infection, 29(9), pp. 1117-1119. Elsevier 10.1016/j.cmi.2023.06.021

Chiffi, Gabriele; Grandgirard, Denis; Leib, Stephen L; Chrdle, Aleš; Růžek, Daniel (2023). Tick-borne encephalitis: A comprehensive review of the epidemiology, virology, and clinical picture. Reviews in medical virology, 33(5), e2470. Wiley 10.1002/rmv.2470

Shaw, David; Abad, Raquel; Amin-Chowdhury, Zahin; Bautista, Adriana; Bennett, Desiree; Broughton, Karen; Cao, Bin; Casanova, Carlo; Choi, Eun Hwa; Chu, Yiu-Wai; Claus, Heike; Coelho, Juliana; Corcoran, Mary; Cottrell, Simon; Cunney, Robert; Cuypers, Lize; Dalby, Tine; Davies, Heather; de Gouveia, Linda; Deghmane, Ala-Eddine; ... (2023). Trends in invasive bacterial diseases during the first 2 years of the COVID-19 pandemic: analyses of prospective surveillance data from 30 countries and territories in the IRIS Consortium. The Lancet. Digital health, 5(9), e582-e593. Elsevier 10.1016/S2589-7500(23)00108-5

Campos-Madueno, Edgar I; Aldeia, Claudia; Perreten, Vincent; Sendi, Parham; Moser, Aline I; Endimiani, Andrea (2023). Detection of blaCTX-M and blaDHA genes in stool samples of healthy people: comparison of culture- and shotgun metagenomic-based approaches. Frontiers in Microbiology, 14(1236208), p. 1236208. Frontiers 10.3389/fmicb.2023.1236208

Campos-Madueno, Edgar I; Aldeia, Claudia; Sendi, Parham; Endimiani, Andrea (2023). Escherichia ruysiae May Serve as a Reservoir of Antibiotic Resistance Genes across Multiple Settings and Regions. Microbiology spectrum, 11(4), e0175323. American Society for Microbiology 10.1128/spectrum.01753-23

Bergant, Valter; Schnepf, Daniel; de Andrade Krätzig, Niklas; Hubel, Philipp; Urban, Christian; Engleitner, Thomas; Dijkman, Ronald; Ryffel, Bernhard; Steiger, Katja; Knolle, Percy A; Kochs, Georg; Rad, Roland; Staeheli, Peter; Pichlmair, Andreas (2023). mRNA 3'UTR lengthening by alternative polyadenylation attenuates inflammatory responses and correlates with virulence of Influenza A virus. Nature communications, 14(1), p. 4906. Nature Publishing Group 10.1038/s41467-023-40469-6

Oberli, Alexander; Furrer, Lavinia; Skoko, Lena; Müller, Norbert; Gottstein, Bruno; Bittel, Pascal (2023). A novel multiplex real-time PCR for the molecular diagnosis of metacestode infections in human patients. (In Press). Clinical microbiology and infection Elsevier 10.1016/j.cmi.2023.07.032

Renggli, Luzia; Gasser, Michael; Buetti, Niccolò; Kronenberg, Andreas (2023). Increase in methicillin-susceptible Staphylococcus aureus bloodstream infections in Switzerland: a nationwide surveillance study (2008-2021). Infection, 51(4), pp. 1025-1031. Springer 10.1007/s15010-023-01980-6

Marchionatti, Emma; Kittl, Sonja; Sendi, Parham; Perreten, Vincent (5 July 2023). Phenotypic and WGS-based characterization of antimicrobial resistance of Trueperella pyogenes clinical isolates from humans and animals in Switzerland (Unpublished). In: 9th Symposium on Antimicrobial Resistance in Animals and the Environment. Tours, France. 3. - 5. July 2023.

Sendi, Parham; Widmer, Nadja; Branca, Mattia; Thierstein, Marc; Büchi, Annina Elisabeth; Güntensperger, Dominik; Blum, Manuel Raphael; Baldan, Rossella; Tinguely, Caroline; Heg, Dik; Theel, Elitza S; Berbari, Elie; Tande, Aaron J; Endimiani, Andrea; Gowland, Peter; Niederhauser, Christoph (2023). Do quantitative levels of antispike-IgG antibodies aid in predicting protection from SARS-CoV-2 infection? Results from a longitudinal study in a police cohort. Journal of medical virology, 95(7), e28904. Wiley 10.1002/jmv.28904

Rüttimann, Céline; Nissen-Kratzert, Annika; Mostacci, Nadja; Künstle, Noëmi; Marten, Andrea; Gisler, Amanda; Bacher, Katharina; Yammine, Sophie; Steinberg, Ruth; Schulzke, Sven; Röösli, Martin; Latzin, Philipp; Hilty, Markus; Frey, Urs; Gorlanova, Olga (2023). Antibiotics in pregnancy influence nasal microbiome and respiratory morbidity in infancy. ERJ Open Research, 9(4) European Respiratory Society 10.1183/23120541.00225-2023

Hänggeli, Kai Pascal Alexander; Hemphill, Andrew; Müller, Norbert; Heller, Manfred; Uldry, Anne-Christine; Braga-Lagache, Sophie; Müller, Joachim; Boubaker, Ghalia (2023). Comparative Proteomic Analysis of Toxoplasma gondii RH Wild-Type and Four SRS29B (SAG1) Knock-Out Clones Reveals Significant Differences between Individual Strains. International journal of molecular sciences, 24(13) MDPI 10.3390/ijms241310454

Blacksell, Stuart D.; Dhawan, Sandhya; Kusumoto, Marina; Le, Kim Khanh; Davis, Ben J.; Summermatter, Katharina; O'Keefe, Joseph; Kozlovac, Joseph; Almuhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M.; Ahumibe, Anthony; Masuku, Zibusiso M.; Bennett, Allan M.; Kojima, Kazunobu; Harper, David R.; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in the Laboratory— Shigella spp. Applied biosafety, 28(2), pp. 96-101. Mary Ann Liebert 10.1089/apb.2022.0046

Fröberg, Gabrielle; Maurer, Florian P; Chryssanthou, Erja; Fernström, Louise; Benmansour, Hanaa; Boarbi, Samira; Mengshoel, Anne Torunn; Keller, Peter Michael; Viveiros, Miguel; Machado, Diana; Fitzgibbon, Margaret M; Mok, Simone; Werngren, Jim; Cirillo, Daniela Maria; Alcaide, Fernando; Hyyryläinen, Hanne-Leena; Aubry, Alexandra; Andres, Sönke; Nadarajan, Darshaalini; Svensson, Erik; ... (2023). Towards clinical breakpoints for non-tuberculous mycobacteria - Determination of epidemiological cut off values for the Mycobacterium avium complex and Mycobacterium abscessus using broth microdilution. Clinical microbiology and infection, 29(6), pp. 758-764. Elsevier 10.1016/j.cmi.2023.02.007

Blacksell, Stuart D.; Dhawan, Sandhya; Kusumoto, Marina; Le, Kim Khanh; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph; Almuhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M.; Ahumibe, Anthony; Masuku, Zibusiso M.; Bennett, Allan M.; Kojima, Kazunobu; Harper, David R.; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in Human and Veterinary Laboratories. Applied biosafety, 28(2), pp. 64-71. Mary Ann Liebert 10.1089/apb.2022.0040

Blacksell, Stuart D.; Dhawan, Sandhya; Kusumoto, Marina; Le, Kim Khanh; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph; Almuhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M.; Ahumibe, Anthony; Masuku, Zibusiso M.; Bennett, Allan M.; Kojima, Kazunobu; Harper, David R.; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in the Laboratory— Bacillus anthracis and Brucella melitensis. Applied biosafety, 28(2), pp. 72-86. Mary Ann Liebert 10.1089/apb.2022.0042

Blacksell, Stuart D.; Dhawan, Sandhya; Kusumoto, Marina; Le, Kim Khanh; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph; Almuhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M.; Ahumibe, Anthony; Masuku, Zibusiso M.; Kojima, Kazunobu; Harper, David R.; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in the Laboratory—SARS-CoV-2. Applied biosafety, 28(2), pp. 87-95. Mary Ann Liebert 10.1089/apb.2022.0039

Blacksell, Stuart D.; Dhawan, Sandhya; Kusumoto, Marina; Le, Kim Khanh; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph; Almuhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M.; Ahumibe, Anthony; Masuku, Zibusiso M.; Bennett, Allan M.; Kojima, Kazunobu; Harper, David R.; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in the Laboratory—Zoonotic Avian Influenza and Mycobacterium tuberculosis. Applied biosafety, 28(3), pp. 135-151. Mary Ann Liebert 10.1089/apb.2022.0038

Gasser, Michael; Cassini, Alessandro; Lo Fo Wong, Danilo; Gelormini, Marcello; Nahrgang, Saskia Andrea; Zingg, Walter; Kronenberg, Andreas Oskar (2023). Associated deaths and disability-adjusted life-years caused by infections with antibiotic-resistant bacteria in Switzerland, 2010 to 2019. Eurosurveillance, 28(20) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2023.28.20.2200532

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D'Incau, Stéphanie Maria; Atkinson, Andrew; Leitner, Lorenz; Kronenberg, Andreas; Kessler, Thomas M; Marschall, Jonas (2023). Bacterial species and antimicrobial resistance differ between catheter and non-catheter-associated urinary tract infections: Data from a national surveillance network. Antimicrobial stewardship & healthcare epidemiology, 3(1), e55. Cambridge University Press 10.1017/ash.2022.340

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Müller, Annelies; Kleynhans, Jackie; de Gouveia, Linda; Meiring, Susan; Cohen, Cheryl; Hathaway, Lucy Jane; von Gottberg, Anne (2022). Streptococcus pneumoniae Serotypes Associated with Death, South Africa, 2012-2018. Emerging infectious diseases, 28(1), pp. 166-179. Centers for Disease Control and Prevention 10.3201/eid2801.210956

Weingartner, Michael; Stücheli, Simon; Jebbawi, Fadi; Gottstein, Bruno; Beldi, Guido; Lundström-Stadelmann, Britta; Wang, Junhua; Odermatt, Alex (2022). Albendazole reduces hepatic inflammation and endoplasmic reticulum-stress in a mouse model of chronic Echinococcus multilocularis infection. PLoS neglected tropical diseases, 16(1), e0009192. Public Library of Science 10.1371/journal.pntd.0009192

Chiffi, Gabriele; Grandgirard, Denis; Sendi, Parham; Dietmann, Anelia; Bassetti, Claudio L. A.; Leib, Stephen (2022). Sleep-Wake and Circadian Disorders after Tick-Borne Encephalitis. Microorganisms, 10(2), p. 304. MDPI 10.3390/microorganisms10020304

Askarian, Mehrdad; Semenov, Aleksandr; Llopis, Ferran; Rubulotta, Francesca; Dragovac, Gorana; Pshenichnaya, Natalia; Assadian, Ojan; Ruch, Yvon; Shayan, Zahra; Padilla Fortunatti, Cristobal; Lucey, Daniel; Almohaizeie, Abdullah; Kamal, Abu Hena Mostafa; Ogunshe, Adenike; Konkayev, Aidos; Beg, Asim; Primerano, Enzo; Amer, Fatma; Kumari Pilli, Hema Prakash; Hung, Ivan; ... (2022). The COVID-19 vaccination acceptance/hesitancy rate and its determinants among healthcare workers of 91 Countries: A multicenter cross-sectional study. EXCLI journal, 21, pp. 93-103. 10.17179/excli2021-4439

Hirzel, Cédric; Grandgirard, Denis; Surial, Bernard; Wider, Manon F.; Leppert, David; Kuhle, Jens; Walti, Laura N.; Schefold, Joerg C.; Spinetti, Thibaud; Suter-Riniker, Franziska; Dijkman, Ronald; Leib, Stephen L (2022). Neuro-axonal injury in COVID-19: the role of systemic inflammation and SARS-CoV-2 specific immune response. Therapeutic advances in neurological disorders, 15, p. 17562864221080528. Sage 10.1177/17562864221080528

Valente, Luca G; Le, Ngoc Dung; Pitton, Melissa; Chiffi, Gabriele; Grandgirard, Denis; Jakob, Stephan M; Cameron, David R; Resch, Grégory; Que, Yok-Ai; Leib, Stephen L (2022). Efficacy assessment of a novel endolysin PlyAZ3aT for the treatment of ceftriaxone-resistant pneumococcal meningitis in an infant rat model. PLoS ONE, 17(4), e0266928. Public Library of Science 10.1371/journal.pone.0266928

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Sendi, Parham; Strahm, Carol; Vogt, Markus; Achermann, Yovnne; Borens, Olivier; Clauss, Martin; Ukay, Ilker (2022). Perioperative Antibiotikaprophylaxe bei elektiver Gelenkprothesenimplantation. Swiss medical forum EMH Schweizerischer Ärzteverlag AG 10.4414/smf.2022.09084

Sendi, Parham; Battegay, Manuel (2022). Orale Virostatika gegen SARS-CoV-2. Swiss medical forum EMH Schweizerischer Ärzteverlag AG 10.4414/smf.2022.09108

Bitzenhofer, Michaela; Suter-Riniker, Franziska; Moor, Matthias B; Sidler, Daniel; Horn, Michael P; Gschwend, Anna; Staehelin, Cornelia; Rauch, Andri; Helbling, Arthur; Jörg, Lukas (2022). Humoral response to mRNA vaccines against SARS-CoV-2 in patients with humoral immunodeficiency disease. PLoS ONE, 17(6), e0268780. Public Library of Science 10.1371/journal.pone.0268780

Schöbi, Nina; Agyeman, Philipp KA; Duppenthaler, Andrea; Bartenstein, Andreas; Keller, Peter M; Suter-Riniker, Franziska; Schmidt, Kristina M; Kopp, Matthias V; Aebi, Christoph (2022). PEDIATRIC TULAREMIA– A CASE SERIES FROM A SINGLE CENTER IN SWITZERLAND. Open Forum Infectious Diseases, 9(7) Oxford University Press 10.1093/ofid/ofac292

Hammer, Helly; Hoepner, Robert; Friedli, Christoph; Leib, Stephen L; Suter-Riniker, Franziska; Diem, Lara; Kamber, Nicole; Chan, Andrew; Salmen, Anke; Kamm, Christian P (2022). Comparison of mRNA Vaccinations with BNT162b2 or mRNA-1273 in Anti-CD20-Treated Multiple Sclerosis Patients. Vaccines, 10(6), p. 922. MDPI 10.3390/vaccines10060922

Laloli, Laura; Licheri, Manon Flore; Probst, Lukas; Licheri, Matthias; Gultom, Mitra; Holwerda, Melle; V'kovski, Philip; Dijkman, Ronald (2022). Time-resolved characterization of the innate immune response in the respiratory epithelium of human, porcine, and bovine during influenza virus infection. Frontiers in immunology, 13, p. 970325. Frontiers Research Foundation 10.3389/fimmu.2022.970325

Barut, Tuba; Halwe, Nico Joel; Taddeo, Adriano; Kelly, Jenna N.; Schön, Jacob; Ebert, Nadine; Ulrich, Lorenz; Devisme, Christelle; Steiner, Silvio; Trüeb, Bettina Salome; Hoffmann, Bernd; Berenguer Veiga, Inês; Leborgne, Nathan Georges François; Aguiar Moreira, Etori; Breithaupt, Angele; Wylezich, Claudia; Höper, Dirk; Wernike, Kerstin; Godel, Aurélie; Thomann, Lisa; ... (2022). The spike gene is a major determinant for the SARS-CoV-2 Omicron-BA. 1 phenotype (bioRxiv). Cold Spring Harbor Laboratory

Sendi, Parham; Ferry, Tristan (2022). Lysins - a new armamentarium for the treatment of bone and joint infections? Journal of bone and joint infection, 7(5), pp. 187-189. Copernicus Publications 10.5194/jbji-7-187-2022

Kronenberg, Andreas; Renggli, Luzia (2022). Handschlag ja oder nein. Hygieneregeln nach COVID-19. Schweizerische Ärztezeitung, 103(35), pp. 1110-1113. EMH Schweizerischer Ärzteverlag AG 10.4414/saez.2022.20892

Sewing, Lilian; Meier, Christian; Sendi, Parham; Christ, Emanuel (2022). Glukokortikoidassoziierte Nebenwirkungen - Prävention und Management. Primary and Hospital Care, 22(11) EMH Swiss Medical Publishers Ltd. 10.4414/phc-f.2022.10495

Ulrich, Lorenz; Halwe, Nico Joel; Taddeo, Adriano; Ebert, Nadine; Schön, Jacob; Devisme, Christelle; Trüeb, Bettina Salome; Hoffmann, Bernd; Wider, Manon; Fan, Xiaoyu; Bekliz, Meriem; Essaidi-Laziosi, Manel; Schmidt, Marie Luisa; Niemeyer, Daniela; Corman, Victor Max; Kraft, Anna; Godel, Aurélie; Laloli, Laura; Kelly, Jenna N; Calderon, Brenda M; ... (2022). Enhanced fitness of SARS-CoV-2 variant of concern Alpha but not Beta. Nature, 602(7896), pp. 307-313. Springer Nature 10.1038/s41586-021-04342-0

2021

Kratzel, Annika; Kelly, Jenna N; V'kovski, Philip; Portmann, Jasmine; Brüggemann, Yannick; Todt, Daniel; Ebert, Nadine; Shrestha, Neeta; Plattet, Philippe; Staab-Weijnitz, Claudia A; von Brunn, Albrecht; Steinmann, Eike; Dijkman, Ronald; Zimmer, Gert; Pfaender, Stephanie; Thiel, Volker (2021). A genome-wide CRISPR screen identifies interactors of the autophagy pathway as conserved coronavirus targets. PLoS biology, 19(12), e3001490. Public Library of Science 10.1371/journal.pbio.3001490

Akello, Joyce Odeke; Kamgang, Richard; Barbani, Maria Teresa; Suter-Riniker, Franziska; Aebi, Christoph; Beuret, Christian; Paris, Daniel H.; Leib, Stephen L.; Ramette, Alban (2021). Genomic analyses of human adenoviruses unravel novel recombinant genotypes associated with severe infections in pediatric patients. Scientific reports, 11(1), p. 24038. Springer Nature 10.1038/s41598-021-03445-y

Ungureanu, Anamaria; van der Meer, Julia; Bicvic, Antonela; Abbuehl, Lena; Chiffi, Gabriele; Jaques, Léonore; Suter-Riniker, Franziska; Leib, Stephen L.; Bassetti, Claudio L.A.; Dietmann, Anelia (2021). Meningitis, meningoencephalitis and encephalitis in Bern: an observational study of 258 patients. BMC neurology, 21(1), p. 474. BioMed Central 10.1186/s12883-021-02502-3

Kaiser-Thom, Sarah; Hilty, Markus; Axiak, Shannon; Gerber, Vinzenz (2021). The skin microbiota in equine pastern dermatitis: a case-control study of horses in Switzerland. Veterinary dermatology, 32(6), 646-e172. Wiley 10.1111/vde.12955

Buetti, Niccolò; Marschall, Jonas; Timsit, Jean-François; Atkinson, Andrew; Kronenberg, Andreas; Sommerstein, Rami (2021). Distribution of pathogens and antimicrobial resistance in bacteremia according to hospitalization duration: A nationwide surveillance study in Switzerland. Clinical microbiology and infection, 27(12), pp. 1820-1825. Elsevier 10.1016/j.cmi.2021.04.025

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Dazio, Valentina; Nigg, Aurélien; Schmidt, Janne S; Brilhante, Michael; Campos-Madueno, Edgar I.; Mauri, Nico; Kuster, Stefan P; Gobeli Brawand, Stefanie; Willi, Barbara; Endimiani, Andrea; Perreten, Vincent; Schuller, Simone (2021). Duration of carriage of multidrug-resistant bacteria in dogs and cats in veterinary care and co-carriage with their owners. One health, 13(100322), p. 100322. Elsevier 10.1016/j.onehlt.2021.100322

Moser, Aline I.; Campos-Madueno, Edgar I.; Sendi, Parham; Perreten, Vincent; Keller, Peter M.; Ramette, Alban; Endimiani, Andrea (2021). Repatriation of a patient with COVID-19 contributed to the importation of an emerging carbapenemase producer. Journal of global antimicrobial resistance, 27, pp. 267-272. Elsevier 10.1016/j.jgar.2021.10.012

Casanova, Carlo; Küffer, Marianne; Leib, Stephen L.; Hilty, Markus (2021). Re-emergence of invasive pneumococcal disease (IPD) and increase of serotype 23B after easing of COVID-19 measures, Switzerland, 2021. Emerging microbes & infections, 10(1), pp. 2202-2204. Taylor & Francis 10.1080/22221751.2021.2000892

Gisler, Amanda; Korten, Insa; de Hoogh, Kees; Vienneau, Danielle; Frey, Urs; Decrue, Fabienne; Gorlanova, Olga; Soti, Andras; Hilty, Markus; Latzin, Philipp; Usemann, Jakob (2021). Associations of air pollution and greenness with the nasal microbiota of healthy infants: A longitudinal study. Environmental research, 202, p. 111633. Elsevier 10.1016/j.envres.2021.111633

Moor, Matthias B.; Suter-Riniker, Franziska; Horn, Michael P.; Aeberli, Daniel; Amsler, Jennifer; Möller, Burkhard; Njue, Linet M.; Medri, Cesare; Angelillo-Scherrer, Anne; Borradori, Luca; Radonjic-Hoesli, Susanne; Seyed Jafari, S. Morteza; Chan, Andrew; Hoepner, Robert; Bacher, Vera Ulrike; Mani, Laila-Yasmin; Iype, Joseena Mariam; Hirzel, Cédric; Maurer, Britta and Sidler, Daniel (2021). Humoral and cellular responses to mRNA vaccines against SARS-CoV-2 in patients with a history of CD20 B-cell-depleting therapy (RituxiVac): an investigator-initiated, single-centre, open-label study. The Lancet. Rheumatology, 3(11), e789-e797. Elsevier 10.1016/S2665-9913(21)00251-4

Renggli, L.; Gasser, M.; Plüss-Suard, C.; Kronenberg, A. (2021). Consumption of anti-meticillin-resistant Staphylococcus aureus antibiotics in Swiss hospitals is associated with antibiotic stewardship measures. The journal of hospital infection, 117, pp. 165-171. Elsevier 10.1016/j.jhin.2021.08.019

Müller, Seraina L C; Morgenstern, Mario; Kuehl, Richard; Muri, Thaddaeus; Kalbermatten, Daniel F; Clauss, Martin; Schaefer, Dirk J; Sendi, Parham; Osinga, Rik (2021). Soft-tissue reconstruction in lower-leg fracture-related infections: An orthoplastic outcome and risk factor analysis. Injury - international journal of the care of the injured, 52(11), pp. 3489-3497. Elsevier 10.1016/j.injury.2021.07.022

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Peker, Nilay; Schuele, Leonard; Kok, Nienke; Terrazos, Miguel; Neuenschwander, Stefan M.; de Beer, Jessica; Akkerman, Onno; Peter, Silke; Ramette, Alban; Merker, Matthias; Niemann, Stefan; Couto, Natacha; Sinha, Bhanu; Rossen, John Wa (2021). Evaluation of whole-genome sequence data analysis approaches for short- and long-read sequencing of Mycobacterium tuberculosis. Microbial genomics, 7(11) Microbiology Society 10.1099/mgen.0.000695

Sendi, Parham; Baldan, Rossella; Thierstein, Marc; Widmer, Nadja; Gowland, Peter; Gahl, Brigitta; Büchi, Annina Elisabeth; Güntensperger, Dominik; Wider, Manon; Blum, Manuel Raphael; Tinguely, Caroline; Maillat, Cédric; Theel, Elitza S; Berbari, Elie; Dijkman, Ronald; Niederhauser, Christoph (2021). A multidimensional cross-sectional analysis of COVID-19 seroprevalence among a police officer cohort: The PoliCOV-19 study. Open Forum Infectious Diseases, 8(12), ofab524. Oxford University Press 10.1093/ofid/ofab524

Herzig, Mandy; Maksimov, Pavlo; Staubach, Christoph; Romig, Thomas; Knapp, Jenny; Gottstein, Bruno; Conraths, Franz J (2021). Red foxes harbor two genetically distinct, spatially separated Echinococcus multilocularis clusters in Brandenburg, Germany. Parasites & Vectors, 14(1), p. 535. BioMed Central 10.1186/s13071-021-05038-0

Gottstein, Bruno; Deplazes, Peter (2021). Alveolar echinococcosis: what triggers emergence in North America, Central Europe and Asia? Current opinion in infectious diseases, 34(5), pp. 440-446. Wolters Kluwer Health 10.1097/QCO.0000000000000765

Müller, Annelies; Schramm, Diana B; Kleynhans, Jackie; de Gouveia, Linda; Meiring, Susan; Ramette, Alban; von Gottberg, Anne; Hathaway, Lucy Jane (2021). Cytokine response in cerebrospinal fluid of meningitis patients and outcome associated with pneumococcal serotype. Scientific reports, 11(1), p. 19920. Springer Nature 10.1038/s41598-021-99190-3

Adam, Kai-Manuel; Osthoff, Michael; Lamoth, Frédéric; Conen, Anna; Erard, Véronique; Boggian, Katia; Schreiber, Peter W; Zimmerli, Stefan; Bochud, Pierre-Yves; Neofytos, Dionysios; Fleury, Mapi; Fankhauser, Hans; Goldenberger, Daniel; Mühlethaler, Konrad; Riat, Arnaud; Zbinden, Reinhard; Kronenberg, Andreas; Quiblier, Chantal; Marchetti, Oscar and Khanna, Nina (2021). Trends of the Epidemiology of Candidemia in Switzerland: A 15-Year FUNGINOS Survey. Open Forum Infectious Diseases, 8(10), ofab471. Oxford University Press 10.1093/ofid/ofab471

Findlay, Jacqueline; Poirel, Laurent; Kessler, Julie; Kronenberg, Andreas; Nordmann, Patrice (2021). New Delhi Metallo-β-Lactamase-Producing Enterobacterales Bacteria, Switzerland, 2019-2020. Emerging infectious diseases, 27(10), pp. 2628-2637. Centers for Disease Control and Prevention 10.3201/eid2710.211265

Diem, Stefan; Gottstein, Bruno; Beldi, Guido; Semmo, Nasser; Diem, Lara F. (2021). Accelerated Course of Alveolar Echinococcosis After Treatment With Steroids in a Patient With Autoimmune Encephalitis. Cureus, 13(10), e18831. Cureus, Inc. 10.7759/cureus.18831

Schären, Olivier P.; Hapfelmeier, Siegfried (2021). Robust microbe immune recognition in the intestinal mucosa. Genes and immunity, 22(5-6), pp. 268-275. Nature Publishing Group 10.1038/s41435-021-00131-x

Valente, Luca G.; Federer, Lea; Iten, Manuela; Grandgirard, Denis; Leib, Stephen L.; Jakob, Stephan M.; Haenggi, Matthias; Cameron, David R.; Que, Yok-Ai; Prazak, Josef (2021). Searching for synergy: combining systemic daptomycin treatment with localised phage therapy for the treatment of experimental pneumonia due to MRSA. BMC research notes, 14(1), p. 381. Biomed Central 10.1186/s13104-021-05796-1

Lhopitallier, Loïc; Kronenberg, Andreas; Meuwly, Jean-Yves; Locatelli, Isabella; Mueller, Yolanda; Senn, Nicolas; D'Acremont, Valérie; Boillat-Blanco, Noémie (2021). Procalcitonin and lung ultrasonography point-of-care testing to determine antibiotic prescription in patients with lower respiratory tract infection in primary care: pragmatic cluster randomised trial. BMJ, 374(n2132), n2132. BMJ Publishing Group 10.1136/bmj.n2132

Schroeder, Simon; Mache, Christin; Kleine-Weber, Hannah; Corman, Victor M; Muth, Doreen; Richter, Anja; Fatykhova, Diana; Memish, Ziad A; Stanifer, Megan L; Boulant, Steeve; Gultom, Mitra; Dijkman, Ronald; Eggeling, Stephan; Hocke, Andreas; Hippenstiel, Stefan; Thiel, Volker; Pöhlmann, Stefan; Wolff, Thorsten; Müller, Marcel A and Drosten, Christian (2021). Functional comparison of MERS-coronavirus lineages reveals increased replicative fitness of the recombinant lineage 5. Nature Communications, 12(1), p. 5324. Springer Nature 10.1038/s41467-021-25519-1

Moor, Julia; Aebi, Susanne; Rickli, Susanne; Mostacci, Nadezda; Overesch, Gudrun; Oppliger, Anne; Hilty, Markus (2021). Dynamics of extended-spectrum cephalosporin-resistant Escherichia coli in pig farms: A longitudinal study. International journal of antimicrobial agents, 58(3), p. 106382. Elsevier 10.1016/j.ijantimicag.2021.106382

Sandbaumhüter, Friederike A; Gittel, Claudia; Larenza-Menzies, M Paula; Theurillat, Regula; Thormann, Wolfgang; Braun, Christina (2021). Stereoselective methadone disposition after administration of racemic methadone to anesthetized Shetland ponies assessed by capillary electrophoresis. Electrophoresis, 42(17-18), pp. 1826-1831. Wiley 10.1002/elps.202100115

Bombaci, Giuseppe; Sarangdhar, Mayuresh Anant; Andina, Nicola; Tardivel, Aubry Bernard Maurice; Chi-Wang Yu, Eric; Mackie, Gillian M.; Pugh, Matthew; Ozan, Vedat Burak; Banz, Yara; Spinetti, Thibaud; Hirzel, Cédric; Youd, Esther; Schefold, Joerg C.; Taylor, Graham; Gazdhar, Amiq; Bonadies, Nicolas; Angelillo-Scherrer, Anne; Schneider, Pascal; Maslowski, Kendle M. and Allam, Ramanjaneyulu (26 August 2021). LRR protein RNH1 dampens the inflammasome activation and is associated with adverse clinical outcomes in COVID-19 patients (In Press) (bioRxiv). Cold Spring Harbor Laboratory 10.1101/2021.04.12.438219

Ticlla, Monica R; Hella, Jerry; Hiza, Hellen; Sasamalo, Mohamed; Mhimbira, Francis; Rutaihwa, Liliana K; Droz, Sara; Schaller, Sarah; Reither, Klaus; Hilty, Markus; Comas, Inaki; Beisel, Christian; Schmid, Christoph D; Fenner, Lukas; Gagneux, Sebastien (2021). The Sputum Microbiome in Pulmonary Tuberculosis and Its Association With Disease Manifestations: A Cross-Sectional Study. Frontiers in Microbiology, 12, p. 633396. Frontiers 10.3389/fmicb.2021.633396

Zürcher, Kathrin; Mugglin, Catrina; Suter-Riniker, Franziska; Keller, Peter M.; Egger, Matthias; Müller, Sandro; Fluri, Michael; Hoffmann, Matthias; Fenner, Lukas (2021). Seroprevalence of SARS-CoV-2 in healthcare workers from outpatient facilities and retirement or nursing homes in a Swiss canton. Swiss medical weekly, 151(33-34), w30021. EMH Schweizerischer Ärzteverlag 10.4414/SMW.2021.w30021

Sommerstein, Rami; Damonti, Lauro; Marschall, Jonas; Harbarth, Stephan; Gasser, Michael; Kronenberg, Andreas; Buetti, Niccolò (2021). Distribution of pathogens and antimicrobial resistance in ICU-bloodstream infections during hospitalization: a nationwide surveillance study. Scientific reports, 11(1), p. 16876. Springer Nature 10.1038/s41598-021-95873-z

Campos-Madueno, Edgar I.; Moser, Aline I.; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Exploring the global spread of Klebsiella grimontii isolates possessing blaVIM-1 and mcr-9. Antimicrobial agents and chemotherapy, 65(9), e0072421. American Society for Microbiology 10.1128/AAC.00724-21

Kraemer, Julia G.; Aebi, Suzanne; Hilty, Markus; Oppliger, Anne (2021). Nasal microbiota composition dynamics after occupational change in animal farmers suggest major shifts. Science of the total environment, 782(146842), p. 146842. Elsevier 10.1016/j.scitotenv.2021.146842

Dantonello, Tobias M.; Kartal-Kaess, Mutlu; Aebi, Christoph; Suter-Riniker, Franziska; Busch, Jasmin D.; Kubetzko, Susanne; Bourquin, Jean-Pierre; Roessler, Jochen (2021). SARS-CoV-2 Infection During Induction Chemotherapy in a Child With High-risk T-Cell Acute Lymphoblastic Leukemia (T-ALL). Journal of pediatric hematology/oncology, 43(6), e804-e807. Wolters Kluwer Health 10.1097/MPH.0000000000001943

Jebbawi, Fadi; Bellanger, Anne-Pauline; Lundström-Stadelmann, Britta; Rufener, Reto; Dosch, Michel; Goepfert, Christine; Gottstein, Bruno; Millon, Laurence; Grandgirard, Denis; Leib, Stephen L.; Beldi, Guido; Wang, Junhua (2021). Innate and adaptive immune responses following PD-L1 blockade in treating chronic murine alveolar echinococcosis. Parasite immunology, 43(8), e12834. Wiley 10.1111/pim.12834

Damonti, Lauro; Buetti, Niccolò; Droz, Sara; Bacher, Ulrike; Pabst, Thomas; Mansouri Taleghani, Behrouz; Baerlocher, Gabriela Maria; Marschall, Jonas (2021). Prevalence and significance of bacterial contamination of autologous stem cell products. The journal of hospital infection, 114, pp. 175-179. Elsevier 10.1016/j.jhin.2021.04.006

Schlaeppi, Klaus; Gross, Josef J.; Hapfelmeier, Siegfried; Erb, Matthias (2021). Plant chemistry and food web health. New Phytologist, 231(3), pp. 957-962. Wiley 10.1111/nph.17385

Jegerlehner, Sabrina; Suter-Riniker, Franziska; Jent, Philipp; Bittel, Pascal; Nagler, Michael (2021). Diagnostic accuracy of a SARS-CoV-2 rapid antigen test in real-life clinical settings. International journal of infectious diseases, 109, pp. 118-122. Elsevier 10.1016/j.ijid.2021.07.010

Moser, Aline; Campos-Madueno, Edgar Igor; Keller, Peter Michael; Endimiani, Andrea (2021). Complete Genome Sequence of a Third- and Fourth-Generation Cephalosporin-Resistant Comamonas kerstersii Isolate. Microbiology resource announcements, 10(28), e0039121. American Society for Microbiology 10.1128/MRA.00391-21

Gómez, Cristina; Jebbawi, Fadi; Weingartner, Michael; Wang, Junhua; Stücheli, Simon; Stieger, Bruno; Gottstein, Bruno; Beldi, Guido; Lundström Stadelmann, Britta; Odermatt, Alex (2021). Impact on Bile Acid Concentrations by Alveolar Echinococcosis and Treatment with Albendazole in Mice. Metabolites, 11(7) MDPI 10.3390/metabo11070442

Gultom, Mitra; Licheri, Matthias; Laloli, Laura; Wider, Manon; Strässle, Marina; V'kovski, Philip; Steiner, Silvio; Kratzel, Annika; Tran, Thi Nhu Thao; Probst, Lukas; Stalder, Hanspeter; Portmann, Jasmine; Holwerda, Melle; Ebert, Nadine; Stokar-Regenscheit, Nadine; Gurtner, Corinne; Zanolari, Patrik; Posthaus, Horst; Schuller, Simone; Vicente-Santos, Amanda; ... (2021). Susceptibility of Well-Differentiated Airway Epithelial Cell Cultures from Domestic and Wild Animals to Severe Acute Respiratory Syndrome Coronavirus 2. Emerging infectious diseases, 27(7), pp. 1811-1820. Centers for Disease Control and Prevention 10.3201/eid2707.204660

Studer, Eveline; Schönecker, Lutz; Meylan, Mireille; Stucki, Dimitri; Dijkman, Ronald; Holwerda, Melle; Glaus, Anna; Becker, Jens (2021). Prevalence of BRD-Related Viral Pathogens in the Upper Respiratory Tract of Swiss Veal Calves. Animals, 11(7) MDPI 10.3390/ani11071940

Moser, Aline I.; Viaggi, Valentina; Mauri, Carola; Carattoli, Alessandra; Luzzaro, Francesco; Endimiani, Andrea (2021). An XDR Proteus vulgaris isolate hosting a novel blaNDM-1- and armA-carrying plasmid. The journal of antimicrobial chemotherapy, 76(7), pp. 1938-1941. Oxford University Press 10.1093/jac/dkab111

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Kwambana-Adams, Brenda Anna; Mulholland, E. Kim; Satzke, Catherine (2020). State-of-the-art in the pneumococcal field: Proceedings of the 11 th International Symposium on Pneumococci and Pneumococcal Diseases (ISPPD-11). Pneumonia, 12, p. 2. Griffith University ePress 10.1186/s41479-019-0064-y

Hodel, M.; Lejon Crottet, S.; Raio, L.; Zimmermann, R.; Lapaire, O.; Canellini, G.; Henny, C.; Niederhauser, C.; Waldvogel, S.; Fontana, S. (2020). Empfehlungen zur Anti-D Immunglobulin-Gabe in der Schwangerschaft (Anti-D-Prophylaxe). Gynäkologie(1), pp. 25-28. Rosenfluh Publikationen

Müller, Annelies; Salmen, Anke; Aebi, Susanne; de Gouveia, Linda; von Gottberg, Anne; Hathaway, Lucy J. (2020). Pneumococcal serotype determines growth and capsule size in human cerebrospinal fluid. BMC microbiology, 20(1), p. 16. BioMed Central 10.1186/s12866-020-1700-7

Lo Priore, Elia; Livermore, David M; Buetti, Niccolo; Jent, Philipp; Pelzer, Niklas; Casanova, Carlo; Furrer, Hansjakob; Babouee Flury, Baharak (2020). Successful Treatment of Acute Prostatitis Caused by Multidrug-Resistant Escherichia coli With Tigecycline Monotherapy. Open Forum Infectious Diseases, 7(1), ofz551. Oxford University Press 10.1093/ofid/ofz551

Sendi, Parham; Dräger, Sarah; Batzer, Bettina; Walser, Susanne; Dangel, Marc; Widmer, Andreas F (2020). The financial burden of an influenza outbreak in a small rehabilitation centre. Influenza and other respiratory viruses, 14(1), pp. 72-76. Wiley 10.1111/irv.12696

Diez Bernal, Sabina; Studer, Nicole; Thormann, Wolfgang; Spadavecchia, Claudia; Levionnois, Olivier (2020). Pharmacokinetic-pharmacodynamic modelling of the antinociceptive effect of a romifidine infusion in standing horses. Veterinary anaesthesia and analgesia, 47(1), pp. 129-136. Elsevier 10.1016/j.vaa.2019.06.010

Plüss-Suard, Catherine; Niquille, Anne; Héquet, Delphine; Krähenbühl, Séverine; Pichon, Renaud; Zanetti, Giorgio; Bugnon, Olivier; Petignat, Christiane (2020). Decrease in Antibacterial Use and Facility-Level Variability After the Introduction of Guidelines and Implementation of Physician-Pharmacist-Nurse Quality Circles in Swiss Long-term Care Facilities. Journal of the American Medical Directors Association, 21(1), pp. 78-83. Elsevier 10.1016/j.jamda.2019.05.016

Egli, Adrian; Koch, Daniel; Danuser, Jürg; Hendriksen, Rene S; Driesen, Susanne; Schmid, Diana Coman; Neher, Richard; Mäusezahl, Mirjam; Seth-Smith, Helena Mb; Bloemberg, Guido; Tschudin-Sutter, Sarah; Endimiani, Andrea; Perreten, Vincent; Greub, Gilbert; Schrenzel, Jacques; Stephan, Roger (2020). Symposium report: One Health meets sequencing. Microbes and infection, 22(1), pp. 1-7. Elsevier Masson SAS 10.1016/j.micinf.2019.07.004

Siemens, Nikolai; Oehmcke-Hecht, Sonja; Hoßmann, Jörn; Skorka, Sebastian B.; Nijhuis, Roel H.T.; Ruppen, Corinne; Skrede, Steinar; Rohde, Manfred; Schultz, Daniel; Lalk, Michael; Itzek, Andreas; Pieper, Dietmar H.; van den Bout, Christiaan J.; Claas, Eric C.J.; Kuijper, Ed J.; Mauritz, Robert; Sendi, Parham; Wunderink, Herman F.; Norrby-Teglund, Anna (2020). Prothrombotic and Proinflammatory Activities of the β-Hemolytic Group B Streptococcal Pigment. Journal of innate immunity, 12(4), pp. 291-303. Karger 10.1159/000504002

Kaiser-Thom, S.; Hilty, Markus; Gerber, V. (2020). Effects of hypersensitivity disorders and environmental factors on the equine intestinal microbiota. The veterinary quarterly, 40(1), pp. 97-107. Taylor & Francis 10.1080/01652176.2020.1745317

Bernasconi, Odette J.; Campos-Madueno, Edgar I.; Donà, Valentina; Perreten, Vincent; Carattoli, Alessandra; Endimiani, Andrea (2020). Investigating the Use of Bacteriophages as New Decolonization Strategy for Intestinal Carriage of CTX-M-15-producing ST131 Escherichia coli: An In Vitro Continuous Culture System Model. Journal of global antimicrobial resistance, 22, pp. 664-671. Elsevier 10.1016/j.jgar.2020.05.018

Schmidt, Janne S.; Kuster, Stefan P.; Nigg, Aurélien; Dazio, Valentina; Brilhante, Michael; Rohrbach, Helene; Bernasconi, Odette J.; Büdel, Thomas; Campos-Madueno, Edgar I.; Gobeli Brawand, Stefanie; Schuller, Simone; Endimiani, Andrea; Perreten, Vincent; Willi, Barbara (2020). Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics. Antimicrobial resistance and infection control, 9(1) BioMed Central 10.1186/s13756-020-00742-5

Bleichenbacher, Stephanie; Stevens, Marc J.A.; Zurfluh, Katrin; Perreten, Vincent; Endimiani, Andrea; Stephan, Roger; Nüesch-Inderbinen, Magdalena (2020). Environmental dissemination of carbapenemase-producing enterobacteriaceae in rivers in Switzerland. Environmental pollution, 265, p. 115081. Elsevier Science 10.1016/j.envpol.2020.115081

Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20

Le, Ngoc Dung; Muri, Lukas; Grandgirard, Denis; Kuhle, Jens; Leppert, David; Leib, Stephen L. (2020). Evaluation of neurofilament light chain in the cerebrospinal fluid and blood as a biomarker for neuronal damage in experimental pneumococcal meningitis. Journal of neuroinflammation, 17(1), p. 293. BioMed Central 10.1186/s12974-020-01966-3

Wang, Junhua; Marreros, Nelson; Rufener, Reto; Hemphill, Andrew; Gottstein, Bruno; Lundström-Stadelmann, Britta (2020). Short communication: Efficacy of albendazole in Echinococcus multilocularis-infected mice depends on the functional immunity of the host. Experimental parasitology, 219, p. 108013. Elsevier 10.1016/j.exppara.2020.108013

Zbinden, Florian R.; De Ste Croix, Megan; Grandgirard, Denis; Haigh, Richard D; Vacca, Irene; Zamudio, Roxana; Goodall, Emily C A; Stephan, Roger; Oggioni, Marco R; Leib, Stephen L. (2020). Pathogenic Differences of Type 1 Restriction-Modification Allele Variants in Experimental Listeria monocytogenes Meningitis. Frontiers in cellular and infection microbiology, 10, p. 590657. Frontiers 10.3389/fcimb.2020.590657

Pan, Steven D.; Grandgirard, Denis; Leib, Stephen L. (2020). Adjuvant Cannabinoid Receptor Type 2 Agonist Modulates the Polarization of Microglia Towards a Non-Inflammatory Phenotype in Experimental Pneumococcal Meningitis. Frontiers in cellular and infection microbiology, 10 Frontiers 10.3389/fcimb.2020.588195

Rosser, Christian; Sager, Fritz; Leib, Stephen L. (2020). Six Recommendations to Build Legitimacy for Translational Research Organizations. Frontiers in medicine, 7, p. 586177. Frontiers 10.3389/fmed.2020.586177

Kümin, Daniel; Gsell Albert, Monika; Weber, Benjamin; Summermatter, Kathrin (2020). The Hitchhiker’s Guide to Hydrogen Peroxide Fumigation, Part 1: Introduction to Hydrogen Peroxide Fumigation. Applied biosafety, 25(4), pp. 214-224. Sage 10.1177/1535676020921007

Gultom, Mitra; Laloli, Laura; Dijkman, Ronald (2020). Well-Differentiated Primary Mammalian Airway Epithelial Cell Cultures. In: Maier, Helena J.; Bickerton, Erica (eds.) Coronaviruses. Methods and Protocols. Methods in Molecular Biology: Vol. 2203 (pp. 119-134). Humana, New York, NY 10.1007/978-1-0716-0900-2_10

Vuitton, Dominique A; McManus, Donald P; Rogan, Michael T; Romig, Thomas; Gottstein, Bruno; Naidich, Ariel; Tuxun, Tuerhongjiang; Wen, Hao; Menezes da Silva, Antonio (2020). International consensus on terminology to be used in the field of echinococcoses. Parasite, 27(41), p. 41. EDP Sciences 10.1051/parasite/2020024

2019

Kuenzli, Esther; Büdel, Thomas; Bernasconi, Odette J.; Schlagenhauf, Patricia; Florek, Peter; Gültekin, Nejla; Hatz, Christoph; Endimiani, Andrea (2019). Intestinal Colonization with Multidrug-Resistant Enterobacteriaceae: Screening of Swiss Military Deployed to Kosovo. Journal of global antimicrobial resistance, 19, pp. 93-95. Elsevier 10.1016/j.jgar.2019.08.027

Plate, Andreas; Kronenberg, Andreas; Risch, Martin; Mueller, Yolanda; Di Gangi, Stefania; Rosemann, Thomas; Senn, Oliver (2019). Active surveillance of antibiotic resistance patterns in urinary tract infections in primary care in Switzerland. Infection, 47(6), pp. 1027-1035. Springer-Medizin-Verlag 10.1007/s15010-019-01361-y

Perrodin, Stéphanie; Walti, Laura; Gottstein, Bruno; Kim-Fuchs, Corina; Candinas, Daniel; Banz, Vanessa (2019). Fasciola hepatica in a country of low incidence: a tricky diagnosis. Hepatobiliary surgery and nutrition, 8(6), pp. 597-603. AME Publishing Company 10.21037/hbsn.2019.04.02

Endimiani, Andrea (22 November 2019). MDROs: molecular diagnostic tools (Unpublished). In: Symposium Antibiotic Resistance StAR. Bern. 22.11.2019.

Vasoo, Shawn; Chan, Monica; Sendi, Parham; Berbari, Elie (2019). The Value of Ortho-ID Teams in Treating Bone and Joint Infections. Journal of bone and joint infection, 4(6), pp. 295-299. Ivyspring International Publisher 10.7150/jbji.41663

Troxler, Lukas J.; Werren, Joel P.; Schaffner, Thierry O.; Mostacci, Nadezda; Vermathen, Peter; Vermathen, Martina; Wüthrich, Daniel; Simillion, Cedric; Brugger, Silvio D.; Bruggmann, Rémy; Hathaway, Lucy J.; Furrer, Julien; Hilty, Markus (2019). Carbon source regulates polysaccharide capsule biosynthesis in Streptococcus pneumoniae. Journal of biological chemistry, 294(46), pp. 17224-17238. American Society for Biochemistry and Molecular Biology 10.1074/jbc.RA119.010764

Wasimuddin, Wasimuddin; Schlaeppi, Klaus; Ronchi, Francesca; Leib, Stephen L.; Erb, Matthias; Ramette, Alban (15 November 2019). Evaluation of primer pairs for microbiome profiling across a food chain from soils to humans within the One Health framework (bioRxiv). Cold Spring Harbor Laboratory 10.1101/843144

Prazak, Josef; Iten, Manuela; Cameron, David Robert; Save, Jonathan Florian; Grandgirard, Denis; Resch, Gregory; Göpfert, Christine; Leib, Stephen L.; Takala, Jukka; Jakob, Stephan; Que, Yok-Ai; Hänggi, Matthias (2019). Bacteriophages Improve Outcome in Experimental Staphylococcus Aureus Ventilator Associated Pneumonia. American journal of respiratory and critical care medicine, 200(9), pp. 1126-1133. American Lung Association 10.1164/rccm.201812-2372OC

Hathaway, Lucy J. (2019). New virulence factors identified in pneumococcal meningtitis. Trends in microbiology, 27(11), pp. 895-896. Elsevier Current Trends 10.1016/j.tim.2019.08.008

Asner, Sandra A; Agyeman, Philipp; Gradoux, Eugénie; Posfay-Barbe, Klara M; Heininger, Ulrich; Giannoni, Eric; Crisinel, Pierre A; Stocker, Martin; Bernhard-Stirnemann, Sara; Niederer-Loher, Anita; Kahlert, Christian R; Hasters, Paul; Relly, Christa; Baer, Walter; Aebi, Christoph; Schlapbach, Luregn Jan; Berger, Christoph (2019). Burden of Streptococcus pneumoniae sepsis in children after introduction of pneumococcal conjugate vaccines - a prospective population-based cohort study. Clinical infectious diseases, 69(9), pp. 1574-1580. The University of Chicago Press 10.1093/cid/ciy1139

Cameron, David R.; Ramette, Alban; Prazak, Josef; Entenza, José; Hänggi, Matthias; Que, Yok-Ai; Resch, Grégory (2019). Draft Genome Sequence of Methicillin-Resistant Staphylococcus aureus Strain AW7, Isolated from a Patient with Bacteremia. Microbiology resource announcements, 8(40) American Society for Microbiology 10.1128/MRA.00806-19

Büdel, Thomas; Kuenzli, Esther; Clément, Mathieu; Bernasconi, Odette J.; Fehr, Jan; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2019). Polyclonal gut colonization with extended-spectrum cephalosporin- and/or colistin-resistant Enterobacteriaceae: a normal status for hotel employees on the island of Zanzibar, Tanzania. The journal of antimicrobial chemotherapy, 74(10), pp. 2880-2890. Oxford University Press 10.1093/jac/dkz296

Grüter, Basil Erwin; Täschler, Dominik; Strange, Fabio; Rey, Jeannine; von Gunten, Michael; Grandgirard, Denis; Leib, Stephen; Remonda, Luca; Widmer, Hans Rudolf; Nevzati, Edin; Fandino, Javier; Marbacher, Serge; Coluccia, Daniel (2019). Testing bioresorbable stent feasibility in a rat aneurysm model. Journal of neurointerventional surgery, 11(10), pp. 1050-1054. BMJ Publishing Group 10.1136/neurintsurg-2018-014697

Rammlmair, Anna; Mühlethaler, Konrad; Haneke, Eckart (2019). Fusarium onychomycoses in Switzerland-A mycological and histopathological study. Mycoses, 62(10), pp. 928-931. Wiley-Blackwell 10.1111/myc.12964

Pinard, Christopher; Cuq, Benoît; Gibson, Thomas; Brisson, Brigitte; Plattner, Brandon; Lillie, Brandon; Bienzle, Dorothee; Brouwer, Emily; Gottstein, Bruno; Peregrine, Andrew (2019). Alveolar echinococcosis in an Ontario dog resembling an hepatic abscess. Canadian veterinary journal - Revue vétérinaire canadienne, 60(10), pp. 1099-1103. Canadian Veterinary Medical Association

Pires, Humberto; Martins, Manuel; Matos, Ana Cristina; Cardoso, Luís; Monteiro, Fernando; Roque, Natália; Nunes, Telmo; Gottstein, Bruno; Cortes, Helder (2019). Geospatial analysis applied to seroepidemiological survey of canine leishmaniosis in east-central Portugal. Veterinary parasitology, 274, p. 108930. Elsevier 10.1016/j.vetpar.2019.108930

Nasher, Fauzy; Kwun, Min Jung; Croucher, Nicholas J; Heller, Manfred; Hathaway, Lucy J. (2019). Peptide occurring in Enterobacteriaceae triggers Streptococcus pneumoniae cell death. Frontiers in cellular and infection microbiology, 9(320), p. 320. Frontiers 10.3389/fcimb.2019.00320

Staehelin, Cornelia; Chernet, Afona; Sydow, Véronique; Piso, Rein J; Suter, Franziska Marta; Funez, Sabine; Nickel, Beatrice; Paris, Daniel H; Labhardt, Niklaus D (2019). Seroprotection rates of vaccine-preventable diseases among newly arrived Eritrean asylum seekers in Switzerland: a cross-sectional study. Journal of travel medicine, 26(6) Oxford University Press 10.1093/jtm/taz035

Nigg, Aurélien; Brilhante, Michael; Dazio, Valentina; Clément, Mathieu; Collaud, Alexandra; Gobeli, Stefanie; Willi, Barbara; Endimiani, Andrea; Schuller, Simone; Perreten, Vincent (2019). Shedding of OXA-181 carbapenemase-producing Escherichia coli from companion animals after hospitalisation in Switzerland: an outbreak in 2018. Eurosurveillance, 24(39), pp. 13-24. European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2019.24.39.1900071

Lachenmayer, A.; Gebbers, D.; Gottstein, B.; Candinas, D.; Beldi, G. (2019). Elevated incidence of alveolar echinococcosis in immunocompromised patients. Food and waterborne parasitology, 16, e00060. Elsevier 10.1016/j.fawpar.2019.e00060

Fulchini, R; Albrich, W C; Kronenberg, A.; Egli, A; Kahlert, C R; Schlegel, M; Kohler, P (2019). Antibiotic-resistant pathogens in different patient settings and identification of surveillance gaps in Switzerland - a systematic review. Epidemiology and infection, 147(e259), e259. Cambridge University Press 10.1017/S0950268819001523

Grädel, Carole; Terrazos Miani, Miguel Angel; Barbani, Maria Teresa; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2019). Rapid and Cost-Efficient Enterovirus Genotyping from Clinical Samples Using Flongle Flow Cells. Genes, 10(9) MDPI, Molecular Diversity Preservation International 10.3390/genes10090659

Jonsdottir, Hulda R.; Marti, Sabrina; Geerts, Dirk; Rodriguez, Regulo; Thiel, Volker; Dijkman, Ronald (2019). Establishment of Primary Transgenic Human Airway Epithelial Cell Cultures to Study Respiratory Virus-Host Interactions. Viruses, 11(8) Molecular Diversity Preservation International MDPI 10.3390/v11080747

Thomi, Gierin; Joerger-Messerli, Marianne; Haesler, Valérie; Muri, Lukas; Surbek, Daniel; Schoeberlein, Andreina (2019). Intranasally Administered Exosomes from Umbilical Cord Stem Cells Have Preventive Neuroprotective Effects and Contribute to Functional Recovery after Perinatal Brain Injury. Cells, 8(8) MDPI 10.3390/cells8080855

Lhopitallier, Loïc; Kronenberg, Andreas; Meuwly, Jean-Yves; Locatelli, Isabella; Dubois, Julie; Marti, Joachim; Mueller, Yolanda; Senn, Nicolas; D'Acremont, Valérie; Boillat-Blanco, Noémie (2019). Procalcitonin and lung ultrasonography point-of-care testing to decide on antibiotic prescription in patients with lower respiratory tract infection in primary care: protocol of a pragmatic cluster randomized trial. BMC pulmonary medicine, 19(1), p. 143. BioMed Central 10.1186/s12890-019-0898-3

Muri, Lukas Kilian; Leppert, David; Grandgirard, Denis; Leib, Stephen (2019). MMPs and ADAMs in neurological infectious diseases and multiple sclerosis. Cellular and molecular life sciences : CMLS, 76(16), pp. 3097-3116. Springer 10.1007/s00018-019-03174-6

Mellhammar, Lisa; Linder, Adam; Tverring, Jonas; Christensson, Bertil; Boyd, John H; Sendi, Parham; Åkesson, Per; Kahn, Fredrik (2019). NEWS2 is Superior to qSOFA in Detecting Sepsis with Organ Dysfunction in the Emergency Department. Journal of Clinical Medicine, 8(8) MDPI 10.3390/jcm8081128

Muri, Lukas Kilian; Le, Ngoc Dung; Zemp, Jonas; Grandgirard, Denis; Leib, Stephen L. (2019). Metformin mediates neuroprotection and attenuates hearing loss in experimental pneumococcal meningitis. Journal of neuroinflammation, 16(1), p. 156. BioMed Central 10.1186/s12974-019-1549-6

Zanichelli, Veronica; Huttner, Angela; Harbarth, Stephan; Kronenberg, Andreas; Huttner, Benedikt; Swiss Centre For Antibiotic Resistance Anresis, ANRESIS (2019). Antimicrobial resistance trends in Escherichia coli, Klebsiella pneumoniae and Proteus mirabilis urinary isolates from Switzerland: retrospective analysis of data from a national surveillance network over an 8-year period (2009-2016). Swiss medical weekly, 149, w20110. EMH Media 10.4414/smw.2019.20110

Boelsen, Laura K; Dunne, Eileen M; Mika, Moana; Eggers, Stefanie; Nguyen, Cattram D; Ratu, F Tupou; Russell, Fiona M; Mulholland, E Kim; Hilty, Markus; Satzke, Catherine (2019). The association between pneumococcal vaccination, ethnicity, and the nasopharyngeal microbiota of children in Fiji. Microbiome, 7(1), p. 106. BioMed Central 10.1186/s40168-019-0716-4

Muri, Lukas; Perny, Michael; Zemp, Jonas; Grandgirard, Denis; Leib, Stephen L. (2019). Combining Ceftriaxone with Doxycycline and Daptomycin Reduces Mortality, Neuroinflammation, Brain Damage and Hearing Loss in Infant Rat Pneumococcal Meningitis. Antimicrobial agents and chemotherapy, 63(7) American Society for Microbiology 10.1128/AAC.00220-19

Seth-Smith, Helena; Egli-Gany, Dianne; Golparian, Daniel; Donà, Valentina; Endimiani, Andrea; Unemo, Magnus; Low, Nicola (July 2019). P637 Neisseria gonorrhoeae genomic diversity in high risk groups in Switzerland [abstract]. Sexually transmitted infections, 95(Suppl 1), P637. BMJ Publishing Group 10.1136/sextrans-2019-sti.705

Donà, Valentina; Scheidegger, Maximilian; do Couto Pires, João Pedro; Furrer, Hansjakob; Atkinson, Andrew; Babouee Flury, Baharak (2019). Gradual in vitro Evolution of Cefepime Resistance in an ST131 Escherichia coli Strain Expressing a Plasmid-Encoded CMY-2 β-Lactamase. Frontiers in Microbiology, 10, p. 1311. Frontiers 10.3389/fmicb.2019.01311

Gariani, Karim; Lebowitz, Dan; Kressmann, Benjamin; von Dach, Elodie; Sendi, Parham; Waibel, Felix; Berli, Martin; Huber, Tanja; Lipsky, Benjamin A; Uçkay, Ilker (2019). Oral Amoxicillin/Clavulanate for Treating Diabetic Foot Infections. Diabetes, obesity & metabolism, 21(6), pp. 1483-1486. Wiley 10.1111/dom.13651

Jent, Philipp; Thalmann, Laura; Pabst, Thomas; Droz, Sara; Sendi, Parham (2019). Adjunctive gentamicin did not improve outcome of enterococcal bacteraemia in neutropenic patients: a propensity scored matched study. Infectious diseases, 51(6), pp. 409-416. Taylor & Francis 10.1080/23744235.2019.1581946

Pfortmüller, Carmen; Barbani, Maria Teresa; Schefold, Jörg Christian; Hage, Elias; Heim, Albert; Zimmerli, Stefan (2019). Severe acute respiratory distress syndrome (ARDS) induced by human adenovirus B21: Report on 2 cases and literature review. Journal of critical care, 51, pp. 99-104. Elsevier 10.1016/j.jcrc.2019.02.019

Hupp, Sabrina; Grandgirard, Denis; Mitchell, Timothy J.; Leib, Stephen; Hathaway, Lucy Jane; Iliev, Asparouh I. (2019). Pneumolysin and the bacterial capsule of Streptococcus pneumoniae cooperatively inhibit taxis and motility of microglia. Journal of neuroinflammation, 16(1), p. 105. BioMed Central 10.1186/s12974-019-1491-7

Krämer, Julia Gabriele; Aebi, Susanne; Oppliger, Anne; Hilty, Markus (2019). Indoor air microbiota of pig farms drives the composition of the pig farmer's nasal microbiota in a season dependent and farm specific manner. Applied and environmental microbiology, 85(9) American Society for Microbiology 10.1128/AEM.03038-18

Büdel, Thomas; Clément, Mathieu; Bernasconi, Odette J.; Principe, Luigi; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2019). Evaluation of EDTA- and DPA-Based Microdilution Phenotypic Tests for the Detection of MCR-Mediated Colistin Resistance in Enterobacteriaceae. Microbial drug resistance, 25(4), pp. 494-500. Mary Ann Liebert 10.1089/mdr.2018.0275

Ackermann-Gäumann, Rahel; Eyer, Claudia; Leib, Stephen; Niederhauser-Lüthi, Christoph (2019). Comparison of Four Commercial IgG-Enzyme-Linked Immunosorbent Assays for the Detection of Tick-Borne Encephalitis Virus Antibodies. Vector borne and zoonotic diseases, 19(5), pp. 358-364. Mary Ann Liebert 10.1089/vbz.2018.2359

Büdel, Thomas; Kuenzli, Esther; Clément, Mathieu; Bernasconi, Odette Joëlle; Fehr, Jan; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (14 April 2019). High prevalence of gut colonization with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in healthy people in Zanzibar, Tanzania (Unpublished). In: 29th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID). Amsterdam. 13-16 April, 2019.

Korten, Insa; Ramsey, Kathryn; Mika, Moana; Usemann, Jakob; Frey, Urs; Hilty, Markus; Latzin, Philipp (2019). Nasal Microbiota and Respiratory Tract Infections: The Role of Viral Detection. American journal of respiratory and critical care medicine, 199(7), pp. 919-922. American Lung Association 10.1164/rccm.201710-2020LE

Uçkay, Ilker; Berli, Martin; Sendi, Parham; Lipsky, Benjamin A (2019). Principles and practice of antibiotic stewardship in the management of diabetic foot infections. Current opinion in infectious diseases, 32(2), pp. 95-101. Wolters Kluwer Health 10.1097/QCO.0000000000000530

Sendi, Parham; Wustmann, Kerstin; Büchi, Annina E.; Noti, Fabian; Klaeser, Bernd; Sonderegger, Beat; Auf der Maur, Christoph; Mercier, Thomas; Schwerzmann, Markus; Ruppen, Corinne (2019). Cardiac Implantable Electronic Device–Related Infection Due to Granulicatella adiacens. Open Forum Infectious Diseases, 6(4), ofz130. Oxford University Press 10.1093/ofid/ofz130

Quinta Brilhante, Michael; Donà, Valentina; Overesch, Gudrun; Endimiani, Andrea; Perreten, Vincent (2019). Characterisation of a porcine Escherichia coli strain from Switzerland carrying mcr-1 on a conjugative multidrug resistance IncHI2 plasmid. Journal of global antimicrobial resistance, 16, pp. 123-124. Elsevier 10.1016/j.jgar.2018.12.007

Pedersen, Eva S L; Spycher, Ben D; de Jong, Carmen; Halbeisen, Florian; Ramette, Alban; Gaillard, Erol A; Granell, Raquel; Henderson, A John; Kuehni, Claudia E (2019). The simple 10-item PARC tool to predict childhood asthma - an external validation. The Journal of allergy and clinical immunology, 7(3), 943-953.e4. Elsevier 10.1016/j.jaip.2018.09.032

van der Kolk, J.H.; Endimiani, A.; Graubner, Claudia; Gerber, Vinzenz; Perreten, Vincent (2019). Acinetobacter in Veterinary Medicine with emphasis on A. baumannii. Journal of global antimicrobial resistance, 16, pp. 59-71. Elsevier 10.1016/j.jgar.2018.08.011

Sendi, Parham (2019). Infective endocarditis caused by Streptococcus agalactiae: time for beta-hemolytic streptococci to follow treatment recommendations for S. aureus? European journal of clinical microbiology & infectious diseases, 38(3), pp. 419-422. Springer 10.1007/s10096-018-03446-2

Kahn, Fredrik; Tverring, Jonas; Mellhammar, Lisa; Wetterberg, Nils; Bläckberg, Anna; Studahl, Erika; Hadorn, Niklas; Kahn, Robin; Nueesch, Susanne; Jent, Philipp; Ricklin, Meret E; Boyd, John; Christensson, Bertil; Sendi, Parham; Åkesson, Per; Linder, Adam (2019). Heparin-Binding Protein As A Prognostic Biomarker of Sepsis and Disease Severity at The Emergency Department. Shock, 52(6), e135-e145. Lippincott Williams & Wilkins 10.1097/SHK.0000000000001332

Colicchio, Roberta; Pagliuca, Chiara; Ricci, Susanna; Scaglione, Elena; Grandgirard, Denis; Masouris, Ilias; Farina, Fabrizio; Pagliarulo, Caterina; Mantova, Giuseppe; Paragliola, Laura; Leib, Stephen; Koedel, Uwe; Pozzi, Gianni; Alifano, Pietro; Salvatore, Paola (2019). Virulence traits of serogroup C meningococcus and isogenic mutant, defective in surface-exposed sialic acid, in a murine model of meningitis. Infection and immunity, 87(4) American Society for Microbiology 10.1128/IAI.00688-18

Barkati, Sapha; Gottstein, Bruno; Müller, Norbert; Sheitoyan-Pesant, Caroline; Metrakos, Peter; Chen, Tianyan; Garceau, Richard; Libman, Michael D; Ndao, Momar; Yansouni, Cedric P (2019). First Human Case of Metacestode Infection Caused by Versteria sp. in a Kidney Transplant Recipient. Clinical infectious diseases, 68(4), pp. 680-683. Oxford University Press 10.1093/cid/ciy602

Zimmerli, Werner; Sendi, Parham (2019). Role of Rifampin against Staphylococcal Biofilm Infections , in Animal Models, and in Orthopedic-Device-Related Infections. Antimicrobial agents and chemotherapy, 63(2) American Society for Microbiology 10.1128/AAC.01746-18

Boyle, K Keely; Kuo, Feng-Chih; Horcajada, Juan Pablo; Hughes, Harriet; Cavagnaro, Luca; Marculescu, Camelia; McLaren, Alex; Nodzo, Scott R; Riccio, Giovanni; Sendi, Parham; Silibovsky, Randi; Stammers, John; Tan, Timothy L; Wimmer, Matthias (2019). General Assembly, Treatment, Antimicrobials: Proceedings of International Consensus on Orthopedic Infections. The journal of arthroplasty, 34(2S), S225-S237. Elsevier 10.1016/j.arth.2018.09.074

Li, Ho-Kwong; Rombach, Ines; Zambellas, Rhea; Walker, A Sarah; McNally, Martin A; Atkins, Bridget L; Lipsky, Benjamin A; Hughes, Harriet C; Bose, Deepa; Kümin, Michelle; Scarborough, Claire; Matthews, Philippa C; Brent, Andrew J; Lomas, Jose; Gundle, Roger; Rogers, Mark; Taylor, Adrian; Angus, Brian; Byren, Ivor; Berendt, Anthony R; ... (2019). Oral versus Intravenous Antibiotics for Bone and Joint Infection. The New England journal of medicine, 380(5), pp. 425-436. Massachusetts Medical Society 10.1056/NEJMoa1710926

Ott, Sebastian Robert; Meier, N; Kolditz, Martin; Bauer, Torsten T; Rohde, Gernot; Presterl, Elisabeth; Schürmann, Dirk; Lepper, Philipp M; Ringshausen, Felix C; Flick, Holger; Leib, Stephen; Pletz, Mathias W (2019). "Pulmonary Nocardiosis in Western Europe-Clinical evaluation of 43 patients and population-based estimates of hospitalization rates". International journal of infectious diseases, 81, pp. 140-148. Elsevier 10.1016/j.ijid.2018.12.010

Needle, David B; Selig, Martin K; Jackson, Kenneth A; Delwart, Eric; Tighe, Ellyn; Leib, Stephen L.; Seuberlich, Torsten; Pesavento, Patricia A (2019). Fatal bronchopneumonia caused by skunk adenovirus 1 in an African pygmy hedgehog. Journal of veterinary diagnostic investigation, 31(1), pp. 103-106. American Association of Veterinary Laboratory Diagnosticians AAVLD 10.1177/1040638718812123

do Couto Pires, João Pedro; Kraemer, Julia G.; Kuenzli, Esther; Kasraian, Sara; Tinguely, Regula; Hatz, Christoph; Endimiani, Andrea; Hilty, Markus (2019). Gut microbiota dynamics in travelers returning from India colonized with extended-spectrum cephalosporin-resistant Enterobacteriaceae: A longitudinal study. Travel medicine and infectious disease, 27, pp. 72-80. Elsevier 10.1016/j.tmaid.2018.10.012

Marion, Solenne; Studer, Nicolas; Desharnais, Lyne; Menin, Laure; Escrig, Stéphane; Meibom, Anders; Hapfelmeier, Siegfried Hektor; Bernier-Latmani, Rizlan (2019). In vitro and in vivo characterization of Clostridium scindens bile acid transformations. Gut microbes, 10(4), pp. 481-503. Taylor & Francis 10.1080/19490976.2018.1549420

Molari, Massimiliano; Guilini, Katja; Lins, Lidia; Ramette, Alban; Vanreusel, Ann (2019). CO2 leakage can cause loss of benthic biodiversity in submarine sands. Marine environmental research, 144, pp. 213-229. Elsevier 10.1016/j.marenvres.2019.01.006

Gasser, Michael; Zingg, Walter; Cassini, Alessandro; Kronenberg, Andreas (2019). Attributable deaths and disability-adjusted life-years caused by infections with antibiotic-resistant bacteria in Switzerland. Lancet infectious diseases, 19(1), pp. 17-18. Elsevier 10.1016/S1473-3099(18)30708-4

Bernasconi, Odette Joëlle; Principe, Luigi; Viaggi, Valentina; Luzzaro, Francesco; Endimiani, Andrea (2019). A Novel VanA-Carrying Plasmid in a Clinical Isolate of Enterococcus avium. International journal of antimicrobial agents, 53(6), pp. 876-877. Elsevier 10.1016/j.ijantimicag.2019.04.006

Endimiani, Andrea (2019). Carbapenemase-producing Enterobacteriaceae in humans (Unpublished). In: One Health meets Whole genome sequencing. Lucerne. 21.05.2019.

Sommerstein, Rami; Merz, Tobias M.; Berger, Sabine; Krämer, Julia G.; Marschall, Jonas; Hilty, Markus (2019). Patterns in the longitudinal oropharyngeal microbiome evolution related to ventilator-associated pneumonia. Antimicrobial Resistance and Infection Control, 8, p. 81. BioMed Central 10.1186/s13756-019-0530-6

Frey, Pascal Marcel; Marti, Grischa Robert; Droz, Sara Christine; de Roche von Arx, Mirjam; Suter, Franziska Marta; Aujesky, Drahomir; Brugger, Silvio (2019). Bacterial colonization of handheld devices in a tertiary care setting: a hygiene intervention study. Antimicrobial Resistance and Infection Control, 8(97), p. 97. BioMed Central 10.1186/s13756-019-0546-y

Endimiani, Andrea (2019). Extended-Spectrum Cephalosporin- and Colistin-Resistant E. coli in Tanzania: High Prevalence of Gut Colonization in Healthy People and Chicken Meat Contamination (Unpublished). In: Microbe. San Francisco, USA. 19-24 June, 2019.

Erni, Silvia T.; Fernandes, Gabriella; Buri, Michelle; Perny, Michael; Rutten, Rolf Jan; van Noort, Johannes M; Senn, Pascal; Grandgirard, Denis; Roccio, Marta; Leib, Stephen (2019). Anti-inflammatory and Oto-Protective Effect of the Small Heat Shock Protein Alpha B-Crystallin (HspB5) in Experimental Pneumococcal Meningitis. Frontiers in neurology, 10(570), p. 570. Frontiers Media S.A. 10.3389/fneur.2019.00570

Brugger, Silvio D.; Kraemer, Julia G.; Qi, Weihong; Bomar, Lindsey; Oppliger, Anne; Hilty, Markus (2019). Age-Dependent Dissimilarity of the Nasopharyngeal and Middle Ear Microbiota in Children With Acute Otitis Media. Frontiers in genetics, 10(555), p. 555. Frontiers Media SA 10.3389/fgene.2019.00555

Gisler, Valentin; Benneker, Lorin; Sendi, Parham (2019). Late Spinal Implant Infection caused by Cutibacterium acnes. Journal of bone and joint infection, 4(4), pp. 163-166. Ivyspring International Publisher 10.7150/jbji.36802

Dräger, Sarah; Marx, Anna-Friederike; Pigny, Fiona; Cherpillod, Pascal; Eisermann, Philip; Sendi, Parham; Widmer, Andreas F (2019). Lymphocytic choriomeningitis virus meningitis after needlestick injury: a case report. Antimicrobial resistance and infection control, 8(77), p. 77. BioMed Central 10.1186/s13756-019-0524-4

Ottink, Karsten D; Strahm, Carol; Muller-Kobold, Anneke; Sendi, Parham; Wouthuyzen-Bakker, Marjan (2019). Factors to Consider When Assessing the Diagnostic Accuracy of Synovial Leukocyte Count in Periprosthetic Joint Infection. Journal of bone and joint infection, 4(4), pp. 167-173. Ivyspring International Publisher 10.7150/jbji.34854

Hotchen, Andrew J.; Dudareva, Maria; Ferguson, Jamie Y.; Sendi, Parham; McNally, Martin A. (2019). The BACH classification of long bone osteomyelitis. Bone & joint research, 8(10), pp. 459-468. British Editorial Society of Bone & Joint Surgery 10.1302/2046-3758.810.BJR-2019-0050.R1

Sturzenegger, Mathias; Sendi, Parham (2019). «Los e’mal …» – ein (nicht so) klarer Fall von Rückenschmerzen. Swiss medical forum, 19(1920), pp. 326-331. EMH Schweizerischer Ärzteverlag AG 10.4414/smf.2019.08093

2018

Nasher, Fauzy Negiub Ali; Aguilar, Fernando; Aebi, Susanne; Hermans, Peter WM; Heller, Manfred; Hathaway, Lucy Jane (2018). Peptide Ligands of AmiA, AliA, and AliB Proteins Determine Pneumococcal Phenotype. Frontiers in Microbiology, 9(3013) Frontiers 10.3389/fmicb.2018.03013

Golparian, Daniel; Donà, Valentina; Sánchez-Busó, Leonor; Foerster, Sunniva; Harris, Simon; Endimiani, Andrea; Low, Nicola; Unemo, Magnus (2018). Antimicrobial resistance prediction and phylogenetic analysis of Neisseria gonorrhoeae isolates using the Oxford Nanopore MinION sequencer. Scientific Reports, 8(1), p. 17596. Nature Publishing Group 10.1038/s41598-018-35750-4

Sendi, Parham; Müller, Andreas M; Berbari, Elie (2018). Are All Joints Equal? Synovial Fluid Analysis in Periprosthetic Joint Infection. Journal of bone and joint infection, 3(5), pp. 258-259. Ivyspring International Publisher 10.7150/jbji.30491

Egli, Adrian; Blanc, Dominique S; Greub, Gilbert; Keller, Peter Michael; Lazarevic, Vladimir; Lebrand, Aitana; Leib, Stephen; Neher, Richard A; Perreten, Vincent; Ramette, Alban; Schrenzel, Jacques; Stephan, Roger; Wagner, Karolin; Wuethrich, Daniel; Xenarios, Ioannis (2018). Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform. Swiss medical weekly, 148(w14693), w14693. EMH Media 10.4414/smw.2018.14693

Principe, Luigi; Viaggi, Valentina; Clément, Mathieu; Meroni, Elisa; Pini, Beatrice; Endimiani, Andrea; Luzzaro, Francesco (2018). Emergence of CTX-M-1-producing Salmonella enterica serovar Napoli: a novel "enzyme-pathogen association" in the Italian ESBL endemic context. Journal of global antimicrobial resistance, 15, pp. 101-102. Elsevier 10.1016/j.jgar.2018.08.023

Gasser, Michael; Schrenzel, J; Kronenberg, Andreas Oskar (2018). Aktuelle Entwicklung der Antibiotikaresistenzen in der Schweiz. Swiss Medical Forum, 18(46), pp. 943-949. EMH Swiss Medical Publishers 10.4414/smf.2018.03404

Vernazza, P; Tschudin, S; Kronenberg, Andreas Oskar; Hauser, Christoph Victor; Huttner, B; Manuel, O; Kuster, S; Scheidegger, C; Berger, C; Müller, N (2018). Entwicklung infektiologischer Guidelines – ein kontinuierlicher Prozess. Swiss Medical Forum, 18(46), pp. 963-965. EMH Swiss Medical Publishers 10.4414/smf.2018.03382

Künzli, Andrea Brigitte; Marschall, Jonas; Schefold, Joerg C.; Schafer, Margaret; Engler, Oliver B; Ackermann-Gäumann, Rahel; Reineke, David C; Suter, Franziska Marta; Staehelin, Cornelia (2018). Hantavirus Cardiopulmonary Syndrome Due to Imported Andes Hantavirus Infection in Switzerland: A Multidisciplinary Challenge, Two Cases and a Literature Review. Clinical infectious diseases, 67(11), pp. 1788-1795. Oxford Univ. Press 10.1093/cid/ciy443

Büchi, Annina; Hoffmann, Mario; Zbinden, Stephan; Atkinson, Andrew; Sendi, Parham (2018). The Duke minor criterion "predisposing heart condition" in native valve infective endocarditis - a systematic review. Swiss medical weekly, 148(w14675), w14675. EMH Schweizerischer Ärzteverlag 10.4414/smw.2018.14675

Kummer, Mirjam; Šestáková, Nela; Theurillat, Regula; Huynh-Do, Uyen; Endimiani, Andrea; Sendi, Parham; Thormann, Wolfgang (2018). Monitoring of cefepime in urine by micellar electrokinetic capillary chromatography with ultraviolet detection and liquid chromatography coupled to mass spectrometry. Journal of separation science, 41(21), pp. 4067-4074. Wiley-VCH 10.1002/jssc.201800763

Kritikos, A; Neofytos, D; Khanna, N; Schreiber, P W; Boggian, K; Bille, J; Schrenzel, J; Mühlethaler, Konrad; Zbinden, R; Bruderer, T; Goldenberger, D; Pfyffer, G; Conen, A; Van Delden, C; Zimmerli, Stefan; Sanglard, D; Bachmann, D; Marchetti, O; Lamoth, F (2018). Accuracy of Sensititre YeastOne echinocandins epidemiological cut-off values for identification of FKS mutant Candida albicans and Candida glabrata: a ten year national survey of the Fungal Infection Network of Switzerland (FUNGINOS). Clinical microbiology and infection, 24(11), 1214.e1-1214.e4. Elsevier 10.1016/j.cmi.2018.05.012

Federal Office of Public Health, FOPH; Federal Food Safety and Veterinary Office, FSVO (2018). Swiss Antibiotic Resistance Report 2018. Federal Office of Public Health FOPH

Egli, Adrian; Greub, Gilbert; Suter, Franziska Marta; Schrenzel, Jacques (2018). Moderne Verfahren zur Bestimmung von Antibiotikaresistenzen. Swiss Medical Forum, 18(46), pp. 950-956. EMH Swiss Medical Publishers 10.4414/smf.2018.03403

Buetti, Niccolò Ivo Marco-Aurelio; Lo Priore, Elia Francesco; Sommerstein, Rami; Atkinson, Andrew; Kronenberg, Andreas Oskar; Marschall, Jonas (2018). Epidemiology of subsequent bloodstream infections in the ICU. Critical care, 22(1), p. 259. BioMed Central 10.1186/s13054-018-2148-0

Roccio, Marta; Perny, Michael; Ealy, Megan; Widmer, Hans Ruedi; Heller, Stefan; Senn, Pascal (2018). Molecular characterization and prospective isolation of human fetal cochlear hair cell progenitors. Nature communications, 9(4027), pp. 1-14. Nature Publishing Group 10.1038/s41467-018-06334-7

Meier, Rahel; Wirth, Thomas; Vögelin, Esther; Sendi, Parham (2018). Characteristics and Outcome of Twenty-Nine Implant-Related Infections of the Hand and Fingers: Results from a Twelve-Year Observational Study. Surgical infections, 19(7), pp. 729-734. Mary Ann Liebert 10.1089/sur.2018.133

Neumann, Roland P; Hilty, Markus; Xu, Binbin; Usemann, Jakob; Korten, Insa; Mika, Moana; Müller, Loretta; Latzin, Philipp; Frey, Urs (2018). Nasal microbiota and symptom persistence in acute respiratory tract infections in infants. ERJ Open Research, 4(4) European Respiratory Society 10.1183/23120541.00066-2018

Wang, Junhua; Cardoso, Rita; Marreros, Nelson; Müller, Norbert; Lundström Stadelmann, Britta; Siffert, Myriam; Vuitton, Dominique A; Boué, Franck; Lin, Renyong; Wen, Hao; Gottstein, Bruno (2018). Foxp3 T Regulatory Cells as a Potential Target for Immunotherapy against Primary Infection with Echinococcus multilocularis Eggs. Infection and immunity, 86(10) American Society for Microbiology 10.1128/IAI.00542-18

van der Hoek, Lia; Verschoor, Ernst; Beer, Martin; Höper, Dirk; Wernike, Kerstin; Van Ranst, Marc; Matthijnssens, Jelle; Maes, Piet; Sastre, Patricia; Rueda, Paloma; Drexler, Jan Felix; Barr, John; Edwards, Thomas; Millner, Paul; Vermeij, Paul; de Groof, Ad; Thiel, Volker; Dijkman, Ronald; Suter, Franziska Marta; Leib, Stephen; ... (2018). Host switching pathogens, infectious outbreaks and zoonosis: A Marie Skłodowska-Curie innovative training network (HONOURs). Virus research, 257, pp. 120-124. Elsevier 10.1016/j.virusres.2018.09.002

Donà, Valentina; Smid, Joost H; Kasraian, Sara; Egli-Gany, Dianne; Dost, Ferah; Imeri, Fatime; Unemo, Magnus; Low, Nicola; Endimiani, Andrea (2018). Mismatch Amplification Mutation Assay (MAMA)-Based Real-Time PCR for Rapid Detection of and Antimicrobial Resistance Determinants in Clinical Specimens. Journal of clinical microbiology, 56(9), e00365-18. American Society for Microbiology 10.1128/JCM.00365-18

Muri, Lukas; Grandgirard, Denis; Buri, Michelle; Perny, Michael; Leib, Stephen (2018). Combined effect of non-bacteriolytic antibiotic and inhibition of matrix metalloproteinases prevents brain injury and preserves learning, memory and hearing function in experimental paediatric pneumococcal meningitis. Journal of neuroinflammation, 15(1), p. 233. BioMed Central 10.1186/s12974-018-1272-8

Cusini, Alexia; Herren, David; Bütikofer, Lukas; Plüss-Suard, Catherine; Kronenberg, Andreas Oskar; Marschall, Jonas (2018). Intra-hospital differences in antibiotic use correlate with antimicrobial resistance rate in Escherichia coli and Klebsiella pneumoniae: a retrospective observational study. Antimicrobial Resistance and Infection Control, 7(1), p. 89. BioMed Central 10.1186/s13756-018-0387-0

Brochado, Ana Rita; Telzerow, Anja; Bobonis, Jacob; Banzhaf, Manuel; Mateus, André; Selkrig, Joel; Huth, Emily; Bassler, Stefan; Zamarreño Beas, Jordi; Zietek, Matylda; Ng, Natalie; Förster, Sunniva; Ezraty, Benjamin; Py, Béatrice; Barras, Frédéric; Savitski, Mikhail M; Bork, Peer; Göttig, Stephan; Typas, Athanasios (2018). Species-specific activity of antibacterial drug combinations. Nature, 559(7713), pp. 259-263. Macmillan Journals Ltd. 10.1038/s41586-018-0278-9

Mika, Moana; Nita, Izabela Magdalena; Morf, Laura Ursina; Qi, Weihong; Beyeler, Seraina Martina; Bernasconi, Eric; Marsland, Benjamin J; Ott, Sebastian Robert; von Garnier, Christophe; Hilty, Markus (2018). Microbial and host immune factors as drivers of COPD. ERJ Open Research, 4(3) European Respiratory Society 10.1183/23120541.00015-2018

Martin, Thomas C S; Rauch, Andri; Salazar Vizcaya, Luisa Paola; Martin, Natasha K (2018). Understanding and Addressing Hepatitis C Virus Reinfection Among Men Who Have Sex with Men. Infectious disease clinics of North America, 32(2), pp. 395-405. Elsevier 10.1016/j.idc.2018.02.004

Buetti, Niccolò Ivo Marco-Aurelio; Lo Priore, Elia Francesco; Atkinson, Andrew; Kronenberg, Andreas Oskar; Marschall, Jonas (2018). Low incidence of subsequent bacteremia or fungemia after removal of a colonized intravascular catheter tip. Clinical microbiology and infection, 24(5), 548.e1-548.e3. Elsevier 10.1016/j.cmi.2017.09.009

Orasch, Christina; Mertz, Dominik; Garbino, Jorge; van Delden, Christian; Emonet, Stephane; Schrenzel, Jacques; Zimmerli, Stefan; Damonti, Lauro; Mühlethaler, Konrad; Imhof, Alexander; Ruef, Christian; Fehr, Jan; Zbinden, Reinhard; Boggian, Katia; Bruderer, Thomas; Flückiger, Ursula; Conen, Anna; Khanna, Nina; Frei, Reno; Bregenzer, Thomas; ... (2018). Fluconazole non-susceptible breakthrough candidemia after prolonged low-dose prophylaxis: a prospective FUNGINOS study. Journal of infection, 76(5), pp. 489-495. Elsevier 10.1016/j.jinf.2017.12.018

Ramette, Alban Nicolas; Kronenberg, Andreas Oskar (2018). Prevalence of carbapenem-resistant Acinetobacter baumannii from 2005 to 2016 in Switzerland. BMC infectious diseases, 18(159), pp. 1-6. BioMed Central 10.1186/s12879-018-3061-5

Nasher, Fauzy; Förster, Sunniva; Yildirim, Efe C; Grandgirard, Denis; Leib, Stephen; Heller, Manfred; Hathaway, Lucy (2018). Foreign peptide triggers boost in pneumococcal metabolism and growth. BMC microbiology, 18(1), p. 23. BioMed Central 10.1186/s12866-018-1167-y

Kraemer, Julia G; Ramette, Alban; Aebi, Suzanne; Oppliger, Anne; Hilty, Markus (2018). Influence of pig farming on the human's nasal microbiota: The key role of the airborne microbial communities. Applied and environmental microbiology, 84(6) American Society for Microbiology 10.1128/AEM.02470-17

Bernasconi, Odette Joëlle; Donà, Valentina; Do Couto Pires, Joao Pedro; Kuenzli, Esther; Christoph, Hatz; Luzzaro, Francesco; Perreten, Vincent; Endimiani, Andrea (2018). Deciphering the Complete Deletion of the MgrB Locus in an Unusual Colistin-Resistant Klebsiella pneumoniae Colonizing the Gut of a Traveler Returning from India. International journal of antimicrobial agents, 51(3), pp. 529-531. Elsevier 10.1016/j.ijantimicag.2017.09.014

do Couto Pires, João Pedro; Kuenzli, Esther; Hauser, Christoph; Tinguely, Regula; Kasraian Fard, Sara; Atkinson, Andrew; Rauch, Andri; Furrer, Hansjakob; Perreten, Vincent; Marschall, Jonas; Hatz, Christoph; Endimiani, Andrea (2018). Intestinal Colonization with Extended-Spectrum Cephalosporin-Resistant Enterobacteriaceae in Different Populations in Switzerland: Prevalence, Risk Factors and Molecular Features. Journal of global antimicrobial resistance, 12, pp. 17-19. Elsevier 10.1016/j.jgar.2017.11.007

Chanchaithong, Pattrarat; Prapasarakul, Nuvee; Sirisopit Mehl, Nicole; Suanpairintr, Nipattra; Teankum, Komkrich; Collaud, Alexandra; Endimiani, Andrea; Perreten, Vincent (2018). Extensively drug-resistant community-acquired Acinetobacter baumannii sequence type 2 in a dog with urinary tract infection in Thailand. Journal of global antimicrobial resistance, 13, pp. 33-34. Elsevier 10.1016/j.jgar.2018.02.007

Glas, Michael; Frick, Tamara; Springe, Dirk; Putzu, Alessandro; Zürcher, Patrick; Grandgirard, Denis; Leib, Stephen; Jakob, Stephan; Takala, Jukka; Hänggi, Matthias (2018). Neuroprotection with the P53-Inhibitor Pifithrin-μ After Cardiac Arrest in a Rodent Model. Shock, 49(2), pp. 229-234. Lippincott Williams & Wilkins 10.1097/SHK.0000000000000917

Bewersdorf, Jan P; Grandgirard, Denis; Koedel, Uwe; Leib, Stephen (2018). Novel and preclinical treatment strategies in pneumococcal meningitis. Current opinion in infectious diseases, 31(1), pp. 85-92. Lippincott Williams & Wilkins 10.1097/QCO.0000000000000416

Nasher, Fauzy Negiub Ali; Heller, Manfred; Hathaway, Lucy Jane (2018). Streptococcus pneumoniae proteins AmiA, AliA, and AliB bind peptides found in ribosomal proteins of other bacterial species. Frontiers in Microbiology, 8(2688) Frontiers 10.3389/fmicb.2017.02688

Sommerstein, Rami; Atkinson, Andrew; Lo Priore, Elia; Kronenberg, Andreas Oskar; Marschall, Jonas (2018). Characterizing Non-linear Effects of Hospitalization Duration on Antimicrobial Resistance in Respiratory Isolates: A Retrospective Analysis of a Prospective Nationwide Surveillance System. Clinical microbiology and infection, 24(1), pp. 45-52. Elsevier 10.1016/j.cmi.2017.05.018

Korten, Insa; Kieninger, Elisabeth; Klenja, Shkipe; Mack, Ines; Schläpfer, Njima; Barbani, Maria Teresa; Regamey, Nicolas; Kuehni, Claudia E; Hilty, Markus; Frey, Urs; Gorgievski, Meri; Casaulta Aebischer, Carmen; Latzin, Philipp (2018). Respiratory viruses in healthy infants and infants with cystic fibrosis: a prospective cohort study. Thorax, 73(1), pp. 13-20. BMJ Publishing Group 10.1136/thoraxjnl-2016-209553

Jönsson, Agnez; Foerster, Sunniva; Golparian, Daniel; Hamasuna, Ryoichi; Jacobsson, Susanne; Lindberg, Magnus; Jensen, Jörgen Skov; Ohnishi, Makoto; Unemo, Magnus (2018). In vitro activity and time-kill curve analysis of sitafloxacin against a global panel of antimicrobial-resistant and multidrug-resistant Neisseria gonorrhoeae isolates. Acta pathologica, microbiologica et immunologica Scandinavica : APMIS, 126(1), pp. 29-37. Wiley-Blackwell 10.1111/apm.12777

Chisenga, Caroline C; Musukuma, Kalo; Chilengi, Roma; Zürcher, Samuel; Munamunungu, Virginia; Siyunda, Alice; Ojok, David; Bauer, Sophie; Wandeler, Gilles; Vinikoor, Michael (2018). Field performance of the Determine HBsAg point-of-care test for diagnosis of hepatitis B virus co-infection among HIV patients in Zambia. Journal of clinical virology, 98, pp. 5-7. Elsevier 10.1016/j.jcv.2017.11.005

Ruppen, Corinne; Notter, Julia; Strahm, Carol; Sonderegger, Beat; Sendi, Parham (2018). Osteoarticular and skin and soft-tissue infections caused by Streptococcus agalactiae in elderly patients are frequently associated with bacteremia. Diagnostic microbiology and infectious disease, 90(1), pp. 55-57. Elsevier 10.1016/j.diagmicrobio.2017.09.008

Bernasconi, Odette Joëlle; Donà, Valentina; Tinguely, Regula; Endimiani, Andrea (2018). In Vitro Activity of 3 Commercial Bacteriophage Cocktails Against Salmonella and Shigella spp. Isolates of Human Origin. Pathogens and Immunity, 3(1), pp. 72-81. Case Western Reserve University, Cleveland, OH 10.20411/pai.v3i1.234

Clément, Mathieu; Büdel, Thomas; Bernasconi, Odette Joëlle; Principe, Luigi; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2018). The EDTA-based disk-combination tests are unreliable for the detection of MCR-mediated colistin-resistance in Enterobacteriaceae. Journal of microbiological methods, 153, pp. 31-34. Elsevier 10.1016/j.mimet.2018.08.008

Ruppen, Corinne; Mercier, Thomas; Grandgirard, Denis; Leib, Stephen; El Haj, Cristina; Murillo, Oscar; Decosterd, Laurent; Sendi, Parham (2018). Is Penicillin Plus Gentamicin Synergistic Against Sessile Group B Streptococcal Isolates? An Study With an Experimental Model of Foreign-Body Infection. Frontiers in Microbiology, 9, p. 919. Frontiers 10.3389/fmicb.2018.00919

Clément, Mathieu; Ramette, Alban; Bernasconi, Odette J.; Principe, Luigi; Luzzaro, Francesco; Endimiani, Andrea (2018). Whole-Genome Sequence of the First Extended-Spectrum β-Lactamase-Producing Strain of Salmonella enterica subsp. enterica Serovar Napoli. Microbiology resource announcements, 7(10) American Society for Microbiology 10.1128/MRA.00973-18

Endimiani, Andrea (2018). Epidemiology of Carbapenemases: Where Are We? - Carbapenemase Producers: Epidemiology in Travelers and Community-Associated Infections (Unpublished). In: ASM Microbe. Atlanta. 7-11 June, 2018.

Mellors, Theodore R; Rees, Christiaan A; Franchina, Flavio A; Burklund, Alison; Patel, Chaya; Hathaway, Lucy Jane; Hill, Jane E (2018). The volatile molecular profiles of seven Streptococcus pneumoniae serotypes. Journal of chromatography. B - analytical technologies in the biomedical and life sciences, 1096, pp. 208-213. Elsevier 10.1016/j.jchromb.2018.08.032

Lenz, Nicole; Engler, Olivier; Grandgirard, Denis; Leib, Stephen L.; Ackermann-Gäumann, Rahel (2018). Evaluation of antivirals against tick-borne encephalitis virus in organotypic brain slices of rat cerebellum. PLoS ONE, 13(10), e0205294. Public Library of Science 10.1371/journal.pone.0205294

Buetti, Niccolò; Atkinson, Andrew; Widmer, Andreas F; Kronenberg, Andreas; Marschall, Jonas (2018). Catheter-related infections: does the spectrum of microbial causes change over time? A nationwide surveillance study. BMJ open, 8(e023824), pp. 1-5. BMJ Publishing Group 10.1136/bmjopen-2018-023824

Grüter, B; Nevzati, E; Täschler, D; Strange, F; Rey, J; Grandgirard, D.; Leib, Stephen; von Gunten, M; Widmer, Hans Rudolf; Remonda, L; Fandino, J; Coluccia, D; Marbacher, S (2018). Neointima formation and thrombus organization after coil and stent treatments is mediated by cell migration from the adjacent vital vessel wall in rat sidewall aneurysms. Journal of neurological surgery. Part A, Central European neurosurgery, 79(S1), S1-S27. Thieme 10.1055/s-0038-1660695

Grüter, B; Strange, F; Täschler, D; Rey, J; von Gunten, M; Grandgirard, D.; Leib, Stephen; Remonda, L; Widmer, Hans Rudolf; Nevzati, E; Fandino, J; Marbacher, S; Coluccia, D (2018). A biodegradable magnesium stent for aneurysm healing in a rat sidewall aneurysm model. Journal of neurological surgery. Part A, Central European neurosurgery, 79(S 01), S1-S27. Thieme 10.1055/s-0038-1660694

Oechslin, Corinne Pia; Lenz, Nicole; Liechti, Nicole; Ryter, Sarah; Agyeman, Philipp; Bruggmann, Rémy; Leib, Stephen; Beuret, Christian M (2018). Limited Correlation of Shotgun Metagenomics Following Host Depletion and Routine Diagnostics for Viruses and Bacteria in Low Concentrated Surrogate and Clinical Samples. Frontiers in cellular and infection microbiology, 8(375), p. 375. Frontiers 10.3389/fcimb.2018.00375

Molari, Massimiliano; Guilini, Katja; Lott, Christian; Weber, Miriam; de Beer, Dirk; Meyer, Stefanie; Ramette, Alban; Wegener, Gunter; Wenzhöfer, Frank; Martin, Daniel; Cibic, Tamara; De Vittor, Cinzia; Vanreusel, Ann; Boetius, Antje (2018). CO2 leakage alters biogeochemical and ecological functions of submarine sands. Science Advances, 4(2), eaao2040. American Association for the Advancement of Science 10.1126/sciadv.aao2040

Kohler, Philipp; Fulchini, Rosamaria; Albrich, Werner C.; Egli, Adrian; Balmelli, Carlo; Harbarth, Stephan; Héquet, Delphine; Kahlert, Christian R.; Kuster, Stefan P.; Petignat, Christiane; Schlegel, Matthias; Kronenberg, Andreas (2018). Antibiotic resistance in Swiss nursing homes: analysis of National Surveillance Data over an 11-year period between 2007 and 2017. Antimicrobial Resistance and Infection Control, 7(1), p. 88. BioMed Central 10.1186/s13756-018-0378-1

Wassilew, Nasstasja; Seth-Smith, Helena MB; Rolli, Eveline; Fietze, Yvonne; Casanova, Carlo; Führer, Urs; Egli, Adrian; Marschall, Jonas; Buetti, Niccolò Ivo Marco-Aurelio (2018). Outbreak of vancomycin-resistant Enterococcus faecium clone ST796, Switzerland, December 2017 to April 2018. Eurosurveillance, 23(29) European Centre for Disease Prevention and Control 10.2807/1560-7917.es.2018.23.29.1800351

2017

Perny, Michael; Ting, Ching-Chia; Kleinlogel, Sonja; Senn, Pascal; Roccio, Marta (2017). Generation of Otic Sensory Neurons from Mouse Embryonic Stem Cells in 3D Culture. Frontiers in cellular neuroscience, 11, p. 409. Frontiers Research Foundation 10.3389/fncel.2017.00409

Krämer, Julia; Do Couto Pires, Joao Pedro; Küffer, Marianne; Semaani, Eulalia; Endimiani, Andrea; Hilty, Markus; Oppliger, Anne (2017). Prevalence of extended-spectrum β-lactamase-producing Enterobacteriaceae and Methicillin-Resistant Staphylococcus aureus in pig farms in Switzerland. The Science of the total environment, 603-604, pp. 401-405. Elsevier 10.1016/j.scitotenv.2017.06.110

Sommerstein, Rami; Führer, Urs; Lo Priore, Elia Francesco; Casanova, Carlo; Meinel, Dominik M; Seth-Smith, Helena Mb; Kronenberg, Andreas Oskar; Koch, Daniel; Senn, Laurence; Widmer, Andreas F; Egli, Adrian; Marschall, Jonas (2017). Burkholderia stabilis outbreak associated with contaminated commercially-available washing gloves, Switzerland, May 2015 to August 2016. Eurosurveillance, 22(49) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2017.22.49.17-00213

Abraha, Million; Bertisch, Barbara; Hauser, Christoph; Klutschke, Michael; Egli-Gany, Dianne; Smid, Joost; Unemo, Magnus; Endimiani, Andrea; Donà, Valentina; Furrer, Hansjakob; Low, Nicola; Kasraian Fard, Sara (23 November 2017). Factors associated with anitmicrobial resistant gonorrheoea infections in men who have sex with men in Switzerland: case control study. In: Swiss Public Health Conference 2017. Congress Center Basel. 22 - 23 Nov 2017.

Endimiani, Andrea (22 November 2017). Emerging clinical needs not covered with the current automation (Unpublished). In: Symposium for Infectious Diseases: How to stay ahead in the race against resistant pathogens. Bern.

Kronenberg, Andreas Oskar; Bütikofer, Lukas; Odutayo, Ayodele; Mühlemann, Kathrin; Da Costa, Bruno R; Battaglia, Markus; Meli, Damian N; Frey, Peter; Limacher, Andreas; Reichenbach, Stephan; Jüni, Peter (2017). Symptomatic treatment of uncomplicated lower urinary tract infections in the ambulatory setting: randomised, double blind trial. BMJ, 359, j4784. BMJ Publishing Group 10.1136/bmj.j4784

Bernasconi, Odette Joëlle; Principe, Luigi; Tinguely, Regula; Karczmarek, Aneta; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2017). Evaluation of a New Commercial Microarray Platform for the Simultaneous Detection of β-Lactamase and Mcr-1/-2 Genes in Enterobacteriaceae. Journal of clinical microbiology, 55(10), pp. 3138-3141. American Society for Microbiology 10.1128/JCM.01056-17

Gauthiez, Emeline; Habfast-Robertson, Ines; Rüeger, Sina; Kutalik, Zoltan; Aubert, Vincent; Berg, Thomas; Cerny, Andreas; Gorgievski, Meri; George, Jacob; Heim, Markus H; Malinverni, Raffaele; Moradpour, Darius; Müllhaupt, Beat; Negro, Francesco; Semela, David; Semmo, Nasser; Villard, Jean; Bibert, Stéphanie; Bochud, Pierre-Yves (2017). A systematic review and meta-analysis of HCV clearance. Liver international, 37(10), pp. 1431-1445. Wiley 10.1111/liv.13401

Endimiani, Andrea (20 September 2017). Resistance to polymyxins: genetic bases, epidemiology, and detection issues. In: XXII Congreso Latinoamericano de Bioquímica Clínica. Punta del Este, Uruguay. 20.09.2017.

Endimiani, Andrea (20 September 2017). Resistance to carbapenems: mechanisms and detection methods (Unpublished). In: XXII Congreso Latinoamericano de Bioquímica Clínica. Punta del Este, Uruguay. 20.09.2017.

Babouee Flury, Baharak; Donà, Valentina; Buetti, Niccolò Ivo Marco-Aurelio; Furrer, Hansjakob; Endimiani, Andrea (2017). First two cases of severe multifocal infections caused by Klebsiella pneumoniae in Switzerland: characterization of an atypical non-K1/K2-serotype strain causing liver abscess and endocarditis. Journal of global antimicrobial resistance, 10, pp. 165-170. Elsevier 10.1016/j.jgar.2017.04.006

Donà, Valentina; Low, Nicola; Golparian, Daniel; Unemo, Magnus (2017). Recent advances in the development and use of molecular tests to predict antimicrobial resistance in Neisseria gonorrhoeae. Expert review of molecular diagnostics, 17(9), pp. 845-859. Expert Reviews 10.1080/14737159.2017.1360137

Remy, Mélissa; Schöbi, Nina; Kottanattu, Lisa; Pfister, Stefan; Duppenthaler, Andrea; Suter, Franziska Marta (2017). Cerebrospinal fluid CXCL13 as a diagnostic marker of neuroborreliosis in children: a retrospective case-control study. Journal of neuroinflammation, 14(1), p. 173. BioMed Central 10.1186/s12974-017-0948-9

Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17

Dahdal, Suzan; Kalicki, Robert; von Steiger, Niklaus; Sendi, Parham (2017). Disseminated cryptococcal infection in a patient who had kidney transplant: discrepancy between clinical symptoms and microbiological findings. BMJ case reports, 2017 BMJ Publishing Group 10.1136/bcr-2017-219234

Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Erratum to 'Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors' [International Journal of Antimicrobial Agents 49/4 (2017) 519-521]. International journal of antimicrobial agents, 50(2), p. 276. Elsevier 10.1016/j.ijantimicag.2017.05.002

Kapatai, Georgia; Sheppard, Carmen L.; Troxler, Lukas Jeremiah; Litt, David J.; Furrer, Julien; Hilty, Markus; Fry, Norman K. (2017). Pneumococcal 23B Molecular Subtype Identified Using Whole Genome Sequencing. Genome biology and evolution, 9(8), pp. 2145-2158. Oxford University Press 10.1093/gbe/evx092

Ruppen, Corinne; Rasmussen, Magnus; Casanova, Carlo; Sendi, Parham (2017). A 10-year observational study of Streptococcus dysgalactiae bacteraemia in adults: frequent occurrence among female intravenous drug users. Swiss medical weekly, 147(w14469), w14469. EMH Schweizerischer Ärzteverlag 10.4414/smw.2017.14469

Mika, Moana; Maurer, Josua; Korten, Insa Christina Severine; Allemann, Aurélie; Aebi, Suzanne; Brugger, Silvio D; Qi, Weihong; Frey, Urs; Latzin, Philipp; Hilty, Markus (2017). Influence of the pneumococcal conjugate vaccines on the temporal variation of pneumococcal carriage and the nasal microbiota in healthy infants: a longitudinal analysis of a case-control study. Microbiome, 5(1), p. 85. BioMed Central 10.1186/s40168-017-0302-6

Foerster, Sunniva; Desilvestro, Valentino; Hathaway, Lucy J; Althaus, Christian L; Unemo, Magnus (2017). A new rapid resazurin-based microdilution assay for antimicrobial susceptibility testing of Neisseria gonorrhoeae. Journal of antimicrobial chemotherapy, 72(7), pp. 1961-1968. Oxford University Press 10.1093/jac/dkx113

Perny, Michael; Solyga, Magdalena; Grandgirard, Denis; Roccio, Marta; Leib, Stephen; Senn, Pascal (2017). Streptococcus pneumoniae-induced ototoxicity in organ of Corti explant cultures. Hearing research, 350, pp. 100-109. Elsevier 10.1016/j.heares.2017.04.012

Lora-Tamayo, Jaime; Senneville, Éric; Ribera, Alba; Bernard, Louis; Dupon, Michel; Zeller, Valérie; Li, Ho Kwong; Arvieux, Cédric; Clauss, Martin; Uçkay, Ilker; Vigante, Dace; Ferry, Tristan; Iribarren, José Antonio; Peel, Trisha N; Sendi, Parham; Miksic, Nina Gorišek; Rodríguez-Pardo, Dolors; Del Toro, María Dolores; Fernández-Sampedro, Marta; Dapunt, Ulrike; ... (2017). The Not-So-Good Prognosis of Streptococcal Periprosthetic Joint Infection Managed by Implant Retention: The Results of a Large Multicenter Study. Clinical infectious diseases, 64(12), pp. 1742-1752. Oxford University Press 10.1093/cid/cix227

Sendi, Parham; Zimmerli, Werner (2017). The use of rifampin in staphylococcal orthopaedic-device related infections. Clinical microbiology and infection, 23(6), pp. 349-350. Elsevier 10.1016/j.cmi.2016.10.002

Büchi, Annina Elisabeth; Hoffmann, Mario; Zbinden, Stephan; Sendi, Parham (2017). Infective Endocarditis: How Do We Currently Interpret the Duke Minor Criterion "Predisposing Heart Condition" in Native Valves? Cardiology and therapy, 6(1), pp. 121-128. Springer 10.1007/s40119-016-0074-2

Donà, Valentina; Bernasconi, Odette Joëlle; Kasraian Fard, Sara; Tinguely, Regula; Endimiani, Andrea (2017). A SYBRGreen-Based Real-time PCR Method for Improved Detection of Mcr-1-mediated Colistin Resistance in Human Stool Samples. Journal of global antimicrobial resistance, 9, pp. 57-60. Elsevier 10.1016/j.jgar.2017.01.007

Damonti, Lauro; Erard, Véronique; Garbino, Jorge; Schrenzel, Jacques; Zimmerli, Stefan; Mühlethaler, Konrad; Imhof, Alexander; Zbinden, Reinhard; Fehr, Jan; Boggian, Katia; Bruderer, Thomas; Flückiger, Ursula; Frei, Reno; Orasch, Christina; Conen, Anna; Khanna, Nina; Bregenzer, Thomas; Bille, Jacques; Lamoth, Frédéric; Marchetti, Oscar; ... (2017). Catheter retention as a consequence rather than a cause of unfavorable outcome in candidemia. Intensive care medicine, 43(6), pp. 935-939. Springer 10.1007/s00134-017-4737-9

Buschor, Stefanie; Cuenca Vera, Miguelangel; Uster, Stephanie Sarah; Schären, Olivier; Balmer, Maria L; Terrazos Miani, Miguel Angel; Schürch, Christian M; Hapfelmeier, Siegfried Hektor (2017). Innate immunity restricts Citrobacter rodentium A/E pathogenesis initiation to an early window of opportunity. PLoS pathogens, 13(6), e1006476. Public Library of Science 10.1371/journal.ppat.1006476

Béguelin, Charles Antoine; Friolet, Nicole; Moradpour, Darius; Sahli, Roland; Suter, Franziska Marta; Lüthi, Alexander; Cavassini, Matthias; Günthard, Huldrych F; Battegay, Manuel; Bernasconi, Enos; Schmid, Patrick; Calmy, Alexandra; Atkinson, Andrew; Rauch, Andri; Wandeler, Gilles (2017). Impact of tenofovir on hepatitis delta virus replication in the Swiss HIV Cohort Study. Clinical infectious diseases, 64(9), pp. 1275-1278. Oxford University Press 10.1093/cid/cix125

Oberson, JS; Novak, Urban; Mansouri Taleghani, Behrouz; Baerlocher, Gabriela M.; Seipel, Katja; Mueller, BU; Leibundgut, Kurt; Zimmerli, Stefan; Pabst, Thomas (2017). Revisiting G-CSF Support for Hematologic Recovery after Autologous Transplantation in AML Patients. Annals of Hematology & Oncology, 4(5), p. 1148. Austin Publishing Group 10.26420/annhematoloncol.2017.1148

Endimiani, Andrea (22 April 2017). Direct Reporting of Resistance Mechanisms (Unpublished). In: 27th European Congress of Clinical Microbiology and Infectious Diseases.

Allemann, Aurélie; Frey, Pascal Marcel; Brugger, Silvio D; Hilty, Markus (2017). Pneumococcal carriage and serotype variation before and after introduction of pneumococcal conjugate vaccines in patients with acute otitis media in Switzerland. Vaccine, 35(15), pp. 1946-1953. Elsevier 10.1016/j.vaccine.2017.02.010

Buetti, Niccolò Ivo Marco-Aurelio; Atkinson, Andrew; Kronenberg, Andreas Oskar; Marschall, Jonas (2017). Different Epidemiology of Hospital-Acquired Bloodstream Infections Between Small Community Hospitals and Large Community Hospitals. Clinical infectious diseases, 64(7), pp. 984-985. Oxford University Press 10.1093/cid/cix040

Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Hauser, Christoph; Tinguely, Regula; Atkinson, Andrew; Perreten, Vincent; Donà, Valentina; Rauch, Andri; Furrer, Hansjakob; Endimiani, Andrea (2017). Intestinal colonisation with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in HIV-positive individuals in Switzerland: molecular features and risk factors. International journal of antimicrobial agents, 49(4), pp. 519-521. Elsevier 10.1016/j.ijantimicag.2017.02.004

Šestáková, Nela; Theurillat, Regula; Sendi, Parham; Thormann, Wolfgang (2017). Monitoring of cefepime in human serum and plasma by micellar electrokinetic capillary chromatography: Improvement of sample preparation and validation by liquid chromatography coupled to mass spectrometry. Journal of separation science, 40(8), pp. 1805-1814. Wiley-VCH 10.1002/jssc.201601446

Sendi, Parham; Hirzel, Cédric; Bloch, Andreas; Fischer, Urs; Jeannet, Natalie; Berlinger, Livia; Krestel, Heinz Eric (2017). Bartonella-Associated Transverse Myelitis. Emerging infectious diseases, 23(4), pp. 712-713. U.S. National Center for Infectious Diseases 10.3201/eid2304.161733

Buetti, Niccolò Ivo Marco-Aurelio; Atkinson, Andrew; Marschall, Jonas; Kronenberg, Andreas Oskar (2017). Incidence of bloodstream infections: a nationwide surveillance of acute care hospitals in Switzerland 2008-2014. BMJ open, 7(3), e013665. BMJ Publishing Group 10.1136/bmjopen-2016-013665

Buetti, Niccolò Ivo Marco-Aurelio; Atkinson, Andrew; Kottanattu, L; Bielicki, J; Marschall, Jonas; Kronenberg, Andreas (2017). Patterns and trends of pediatric bloodstream infections: a 7-year surveillance study. European journal of clinical microbiology & infectious diseases, 36(3), pp. 537-544. Springer 10.1007/s10096-016-2830-6

Sendi, Parham; Lötscher, P O; Kessler, B; Graber, P; Zimmerli, W; Clauss, M (2017). Debridement and implant retention in the management of hip periprosthetic joint infection: outcomes following guided and rapid treatment at a single centre. The Bone & Joint Journal, 99-B(3), pp. 330-336. British Editorial Society of Bone and Joint Surgery 10.1302/0301-620X.99B3.BJJ-2016-0609.R1

Saegeman, V; Cohen, M C; Alberola, J; Ziyade, N; Farina, C; ESCMID, Study Group for Forensic and Postmortem Microbiology; Cornaglia, G; Fernández-Rodríguez, A (2017). How is post-mortem microbiology appraised by pathologists? Results from a practice survey conducted by ESGFOR. European journal of clinical microbiology & infectious diseases, 36(8), pp. 1381-1385. Springer 10.1007/s10096-017-2943-6

Bader, Joëlle; Däumer, Martin; Schöni-Affolter, Franziska; Böni, Jürg; Gorgievski, Meri; Martinetti, Gladys; Thielen, Alexander; Klimkait, Thomas (2017). Therapeutic Immune Recovery and Reduction of CXCR4-Tropic HIV-1. Clinical infectious diseases, 64(3), pp. 295-300. Oxford University Press 10.1093/cid/ciw737

Jeannet, Natalie; van den Hoogen, Bernadette G; Schefold, Joerg C.; Suter, Franziska Marta; Sommerstein, Rami (2017). Cerebrospinal Fluid Findings in an Adult with Human Metapneumovirus-Associated Encephalitis. Emerging infectious diseases, 23(2), p. 370. U.S. National Center for Infectious Diseases 10.3201/eid2302.161337

Schlapbach, Christoph; Sendi, Parham (2017). Serrated Marine Nose. New England journal of medicine NEJM, 376(3), p. 267. Massachusetts Medical Society MMS 10.1056/NEJMicm1604459

Sendi, Parham; Moser Schaub, Eva Maria; Nirgianakis, Konstantinos; Hathaway, Lucy J; Bittel, Pascal; Goldblatt, David; Streit, Sven (2017). An uncommon site of Streptococcus pneumoniae colonization leading to recurrent pneumococcal disease. Open Forum Infectious Diseases, 4(1), ofw257. Oxford University Press 10.1093/ofid/ofw257

Sendi, Parham; El Hay, Muad Abd; Brandt, Claudia M; Spellerberg, Barbara (2017). Group B Streptococcal Toxic Shock Syndrome and covR/S Mutations Revisited. Emerging infectious diseases, 23(1), pp. 150-152. U.S. National Center for Infectious Diseases 10.3201/eid2301.161063

Béguelin, Charles Antoine; Moradpour, Darius; Sahli, Roland; Suter, Franziska Marta; Lüthi, Alexander; Cavassini, Matthias; Günthard, Huldrych F; Battegay, Manuel; Bernasconi, Enos; Schmid, Patrick; Calmy, Alexandra; Braun, Dominique; Furrer, Hansjakob; Rauch, Andri; Wandeler, Gilles (2017). Hepatitis delta-associated mortality in HIV/HBV-coinfected patients. Journal of hepatology, 66(2), pp. 297-303. Elsevier 10.1016/j.jhep.2016.10.007

Ruppen, Corinne; Decosterd, Laurent; Sendi, Parham (2017). Is gentamicin necessary in the antimicrobial treatment for group B streptococcal infections in the elderly? An in vitro study with human blood products. Infectious diseases, 49(3), pp. 185-192. Taylor & Francis 10.1080/23744235.2016.1244612

Endimiani, Andrea; Allemann, Aurélie; Wüthrich, Daniel; Lupo, Agnese; Hilty, Markus (2017). First report of the macrolide efflux genetic assembly (MEGA) element in Haemophilus parainfluenzae. International journal of antimicrobial agents, 49(2), pp. 265-266. Elsevier 10.1016/j.ijantimicag.2016.11.006

Bernasconi, Odette Joëlle; Donà, Valentina; Tinguely, Regula; Endimiani, Andrea (2017). In Vitro Activity of Three Commercial Bacteriophage Cocktails against Multidrug-Resistant Escherichia coli and Proteus spp. Strains of Human and Non-Human Origin. Journal of global antimicrobial resistance, 8, pp. 179-185. Elsevier 10.1016/j.jgar.2016.12.013

Ruppen, Corinne; Hemphill, Andrew; Sendi, Parham (2017). In vitro activity of gentamicin as an adjunct to penicillin against biofilm group B Streptococcus. Journal of antimicrobial chemotherapy, 72(2), pp. 444-447. Oxford University Press 10.1093/jac/dkw447

Jenkinson, Stephen P.; Grandgirard, Denis; Heidemann, Martina; Tscherter, Anne; Avondet, Marc-André; Leib, Stephen (2017). Embryonic Stem Cell-Derived Neurons Grown on Multi-Electrode Arrays as a Novel In vitro Bioassay for the Detection of Clostridium botulinum Neurotoxins. Frontiers in Pharmacology, 8(73) Frontiers 10.3389/fphar.2017.00073

Sendi, Parham; Hirzel, Cédric; Pfister, Stefan; Ackermann-Gäumann, Rahel; Grandgirard, Denis; Hewer, Ekkehard; Nirkko, Arto Christian (2017). Fatal Outcome of Tick-borne Encephalitis after Vaccine Failure. Frontiers in neurology, 8(119), p. 119. Frontiers Media S.A. 10.3389/fneur.2017.00119

Villa, Laura; Feudi, Claudia; Fortini, Daniela; Brisse, Sylvain; Passet, Virginie; Bonura, Celestino; Endimiani, Andrea; Mammina, Caterina; Ocampo, Ana Maria; Jimenez, Judy Natalia; Doumith, Michel; Woodford, Neil; Hopkins, Katie; Carattoli, Alessandra (2017). Diversity, virulence, and antimicrobial resistance of the KPC-producing Klebsiella pneumoniae ST307 clone. Microbial genomics, 3(4) Microbiology Society 10.1099/mgen.0.000110

Meier, Rahel; Wirth, Thomas; Hahn, Frederik; Vögelin, Esther; Sendi, Parham (2017). Pyogenic arthritis of the fingers and the wrist: Can we shorten antimicrobial treatment duration? Open Forum Infectious Diseases, 4(2), ofx058. Oxford University Press 10.1093/ofid/ofx058

Seiffert, Salome Nadja; Carattoli, Alessandra; Schwendener, Sybille; Collaud, Alexandra; Endimiani, Andrea; Perreten, Vincent (2017). Plasmids Carrying blaCMY -2/4 in Escherichia coli from Poultry, Poultry Meat, and Humans Belong to a Novel IncK Subgroup Designated IncK2. Frontiers in Microbiology, 8(407), p. 407. Frontiers 10.3389/fmicb.2017.00407

Flury, Domenica; Behrend, Henrik; Sendi, Parham; von Kietzell, Matthias; Strahm, Carol (2017). Brucella melitensis prosthetic joint infection. Journal of bone and joint infection, 2(3), pp. 136-142. Ivyspring International Publisher 10.7150/jbji.18408

Büchi, Annina Elisabeth; Hoffmann, Mario (2017). Infective endocarditis: What are predisposing conditions in native valves? (Dissertation, Universität Bern, Medizinische Fakultät, Universitätsklinik für Infektiologie, Inselspital Bern)

Oechslin, Corinne P.; Heutschi, Daniel; Lenz, Nicole; Tischhauser, Werner; Péter, Olivier; Rais, Olivier; Beuret, Christian M.; Leib, Stephen; Bankoul, Sergei; Ackermann-Gäumann, Rahel (2017). Prevalence of tick-borne pathogens in questing Ixodes ricinus ticks in urban and suburban areas of Switzerland. Parasites & Vectors, 10(1), p. 558. BioMed Central 10.1186/s13071-017-2500-2

Alexanian, Michael; Maric, Daniel; Jenkinson, Stephen Philip; Mina, Marco; Friedman, Clayton E.; Ting, Ching-Chia; Micheletti, Rudi; Plaisance, Isabelle; Nemir, Mohamed; Maison, Damien; Kernen, Jasmin; Pezzuto, Iole; Villeneuve, Dominic; Burdet, Frédéric; Ibberson, Mark; Leib, Stephen; Palpant, Nathan J.; Hernandez, Nouria; Ounzain, Samir and Pedrazzini, Thierry (2017). A transcribed enhancer dictates mesendoderm specification in pluripotency. Nature communications, 8(1), p. 1806. Nature Publishing Group 10.1038/s41467-017-01804-w

Agyeman, Philipp; Grandgirard, Denis; Leib, Stephen (2017). Neuroinflammation in Bacterial Meningitis. In: Lyck, R; Enzmann, G (eds.) The Blood Brain Barrier and Inflammation. Progress in Inflammation Research (pp. 213-252). Springer Nature 10.1007/978-3-319-45514-3_10

Coutinho, Leonam G.; de Oliveira, Ana Helena Sales; Witwer, Matthias; Leib, Stephen; Agnez-Lima, Lucymara F. (2017). DNA repair protein APE1 is involved in host response during pneumococcal meningitis and its expression can be modulated by vitamin B6. Journal of neuroinflammation, 14(1), p. 243. BioMed Central 10.1186/s12974-017-1020-5

Low, Nicola; B, Bertisch; Hauser, C; M, Kluschke; Kasraian, S; Egli-Gany, Dianne; Smid, J; M, Unemo; Endimiani, A; Donà, V; Furrer, H (2017). O12.5 Factors associated with antimicrobial resistant gonorrhoea infections in men who have sex with men: case-control study. Sexually transmitted infections, 93(Suppl 2), A28.2-A28. BMJ Publishing Group 10.1136/sextrans-2017-053264.70

Jessen, Gerdhard L.; Lichtschlag, Anna; Ramette, Alban; Pantoja, Silvio; Rossel, Pamela E.; Schubert, Carsten J.; Struck, Ulrich; Boetius, Antje (2017). Hypoxia causes preservation of labile organic matter and changes seafloor microbial community composition (Black Sea). Science Advances, 3(2), e1601897. American Association for the Advancement of Science 10.1126/sciadv.1601897

2016

Pelcová, Marta; Řemínek, Roman; Sandbaumhüter, Friederike Andrea; Mosher, Richard A; Glatz, Zdeněk; Thormann, Wolfgang (2016). Simulation and experimental study of enzyme and reactant mixing in capillary electrophoresis based on-line methods. Journal of chromatography A, 1471, pp. 192-200. Elsevier Science 10.1016/j.chroma.2016.10.002

Perny, Michael; Muri, Lukas; Dawson, Heather; Kleinlogel, Sonja (2016). Chronic activation of the D156A point mutant of Channelrhodopsin-2 signals apoptotic cell death: the good and the bad. Cell death & disease, 7(11), e2447. Nature Publishing Group 10.1038/cddis.2016.351

Brugger, Silvio; Troxler, Lukas; Rüfenacht, Susanne; Frey, Pascal Marcel; Morand, Brigitte; Geyer, Rudolf; Mühlemann, Kathrin; Höck, Stefan; Thormann, Wolfgang; Furrer, Julien; Christen, Stephan; Hilty, Markus (2016). Polysaccharide capsule composition of pneumococcal serotype 19A subtypes: Unaltered among subtypes and independent of the nutritional environment. Infection and immunity, 84(11), pp. 3152-3160. American Society for Microbiology 10.1128/IAI.00474-16

Wolfmeier, Heidi Annemarie; Radecke, Julika; Schönauer, Roman; Köffel, René; Babiychuk, Victoria; Drücker, Patrick; Hathaway, Lucy Jane; Mitchell, Timothy J; Zuber, Benoît; Draeger, Annette; Babiychuk, Eduard (2016). Active release of pneumolysin prepores and pores by mammalian cells undergoing a Streptococcus pneumoniae attack. Biochimica et biophysica acta (BBA) - general subjects, 1860(11 Pt A), pp. 2498-2509. Elsevier 10.1016/j.bbagen.2016.07.022

Kummer, Jessica; Abu-Tayeh, Gabriel; Myrach, Thomas; Stürmer, Matthias (20 October 2016). The Relevance of the Knowledge Commons within Sustainable Development Goals (Unpublished). In: 3rd Thematic IASC Conference on Knowledge Commons. Paris. 20.-21.10.2016.

Muri, Lukas; Gamell, Anna; Ntamatungiro, Alex J; Glass, Tracy R; Luwanda, Lameck B; Battegay, Manuel; Furrer, Hansjakob; Hatz, Christoph; Tanner, Marcel; Felger, Ingrid; Klimkait, Thomas; Letang, Emilio (2016). Development of HIV drug resistance and therapeutic failure in children and adolescents in rural tanzania - an emerging public health concern. AIDS, 31(1), pp. 61-70. Lippincott Williams & Wilkins 10.1097/QAD.0000000000001273

Sommerstein, Rami; Ricklin, Meret E; Barbani, Maria Teresa; Marschall, Jonas; Sendi, Parham (2016). Influenza in the Emergency Department. Journal of emergency medicine, 51(6), pp. 734-735. Elsevier 10.1016/j.jemermed.2016.03.039

Do Couto Pires, Joao Pedro; Bernasconi, Odette Joëlle; Kasraian Fard, Sara; Hilty, Markus; Perreten, Vincent; Endimiani, Andrea (2016). Intestinal colonisation with extended-spectrum cephalosporin-resistant Escherichia coli in Swiss pets: molecular features, risk factors and transmission with owners. International journal of antimicrobial agents, 48(6), pp. 759-760. Elsevier 10.1016/j.ijantimicag.2016.08.007

Buetti, Niccolò Ivo Marco-Aurelio; Marschall, Jonas; Atkinson, Andrew; Kronenberg, Andreas (2016). National Bloodstream Infection Surveillance in Switzerland 2008-2014: Different Patterns and Trends for University and Community Hospitals. Infection control and hospital epidemiology, 37(9), pp. 1060-1067. Cambridge University Press 10.1017/ice.2016.137

Levy Hara, Gabriel; Kanj, Souha S; Pagani, Leonardo; Abbo, Lilian; Endimiani, Andrea; Wertheim, Heiman F L; Amábile-Cuevas, Carlos; Tattevin, Pierre; Mehtar, Shaheen; Lopes Cardoso, Fernando; Unal, Serhat; Gould, Ian (2016). Ten key points for the appropriate use of antibiotics in hospitalised patients: a consensus from the Antimicrobial Stewardship and Resistance Working Groups of the International Society of Chemotherapy. International journal of antimicrobial agents, 48(3), pp. 239-246. Elsevier 10.1016/j.ijantimicag.2016.06.015

Koller, Roger; Barbani, Maria Teresa; Lüthi, Alexander; Zürcher, Samuel; Steinlin, Jacqueline; Leib, Stephen; Gorgievski, Meri (September 2016). Comparison of respiratory and Meningitis/Encephalitis viruses detected by FilmArray® multiplex PCR versus real-time PCR. Journal of clinical virology, 82, S39. Elsevier 10.1016/j.jcv.2016.08.076

Bader, J; Schöni-Affolter, F; Böni, J; Gorgievski, Meri; Martinetti, G; Battegay, M; Klimkait, T; Swiss HIV Cohort, Study (2016). Correlating HIV tropism with immunological response under combination antiretroviral therapy. HIV medicine, 17(8), pp. 615-622. Blackwell Science 10.1111/hiv.12365

Perny, Michael; Roccio, Marta; Grandgirard, Denis; Solyga, Magdalena; Senn, Pascal; Leib, Stephen (2016). The Severity of Infection Determines the Localization of Damage and Extent of Sensorineural Hearing Loss in Experimental Pneumococcal Meningitis. Journal of neuroscience, 36(29), pp. 7740-7749. Society for Neuroscience 10.1523/JNEUROSCI.0554-16.2016

Curiao, Tânia; Marchi, Emmanuela; Grandgirard, Denis; León-Sampedro, Ricardo; Viti, Carlo; Leib, Stephen; Baquero, Fernando; Oggioni, Marco R; Martinez, José Luis; Coque, Teresa M (2016). Multiple adaptive routes of Salmonella enterica Typhimurium to biocide and antibiotic exposure. BMC Genomics, 17(491), p. 491. BioMed Central 10.1186/s12864-016-2778-z

Hirzel, Cédric; Hirzberger, Lea; Furrer, Hansjakob; Endimiani, Andrea (2016). Bactericidal activity of penicillin, ceftriaxone, gentamicin and daptomycin alone and in combination against Aerococcus urinae. International journal of antimicrobial agents, 48(3), pp. 271-276. Elsevier 10.1016/j.ijantimicag.2016.05.007

Stucki, David; Ballif, Marie; Egger, Matthias; Furrer, Hansjakob; Altpeter, Ekkehardt; Battegay, Manuel; Droz, Sara Christine; Bruderer, Thomas; Coscolla, Mireia; Borrell, Sonia; Zürcher, Kathrin; Janssens, Jean-Paul; Calmy, Alexandra; Mazza Stalder, Jesica; Jaton, Katia; Rieder, Hans L; Pfyffer, Gaby E; Siegrist, Hans H; Hoffmann, Matthias; Fehr, Jan; ... (2016). Standard genotyping overestimates transmission of Mycobacterium tuberculosis among immigrants in a low incidence country. Journal of clinical microbiology, 54(7), pp. 1862-1870. American Society for Microbiology 10.1128/JCM.00126-16

Balmer, Maria Luisa; Ma, Eric H; Bantug, Glenn R; Grählert, Jasmin; Pfister, Simona; Glatter, Timo; Jauch, Annaïse; Dimeloe, Sarah; Slack, Emma; Dehio, Philippe; Krzyzaniak, Magdalena A; King, Carolyn G; Burgener, Anne-Valérie; Fischer, Marco; Develioglu, Leyla; Belle, Réka; Recher, Mike; Bonilla, Weldy V; Macpherson, Andrew; Hapfelmeier, Siegfried Hektor; ... (2016). Memory CD8(+) T Cells Require Increased Concentrations of Acetate Induced by Stress for Optimal Function. Immunity, 44(6), pp. 1312-1324. Cell Press 10.1016/j.immuni.2016.03.016

Endimiani, Andrea; Jacobs, Michael R (2016). The Changing Role of the Clinical Microbiology Laboratory in Defining Resistance in Gram-negatives. Infectious disease clinics of North America, 30(2), pp. 323-345. Elsevier 10.1016/j.idc.2016.02.002

Hauser, Christoph; Kronenberg, Andreas; Allemann, Aurélie; Mühlemann, Kathrin; Hilty, Markus (2016). Serotype/serogroup-specific antibiotic non-susceptibility of invasive and non-invasive Streptococcus pneumoniae, Switzerland, 2004 to 2014. Euro surveillance, 21(21) Institut de Veille Sanitaire 10.2807/1560-7917.ES.2016.21.21.30239

Donà, Valentina; Kasraian Fard, Sara; Lupo, Agnese; Guilarte, Yuvia N; Hauser, Christoph; Furrer, Hansjakob; Unemo, Magnus; Low, Nicola; Endimiani, Andrea (2016). A Multiplex Real-Time PCR with High Resolution Melting Analysis for the Characterization of Antimicrobial Resistance in Neisseria gonorrhoeae. Journal of clinical microbiology, 54(8), JCM.03354-15. American Society for Microbiology 10.1128/JCM.03354-15

Escher, Robert; Brunner, Colette; von Steiger, Niklaus; Brodard, Isabelle; Droz, Sara Christine; Abril Gaona, Carlos; Kuhnert, Peter (2016). Clinical and epidemiological analysis of Campylobacter fetus subsp. fetus infections in humans and comparative genetic analysis with strains isolated from cattle. BMC infectious diseases, 16(198), p. 198. BioMed Central 10.1186/s12879-016-1538-7

Mika, Moana; Korten, Insa Christina Severine; Qi, Weihong; Regamey, Nicolas; Frey, Urs; Casaulta Aebischer, Carmen; Latzin, Philipp; Hilty, Markus (2016). The nasal microbiota in infants with cystic fibrosis in the first year of life: a prospective cohort study. The lancet. Respiratory medicine, 4(8), pp. 627-635. Elsevier 10.1016/S2213-2600(16)30081-9

van de Beek, D; Cabellos, C; Dzupova, O; Esposito, S; Klein, M; Kloek, A T; Leib, Stephen; Mourvillier, B; Ostergaard, C; Pagliano, P; Pfister, H W; Read, R C; Sipahi, O Resat; Brouwer, M C (2016). ESCMID guideline: diagnosis and treatment of acute bacterial meningitis. Clinical microbiology and infection, 22(Suppl 3), S37-S62. Blackwell Publishing 10.1016/j.cmi.2016.01.007

Theurillat, Regula; Joneli, Jeannine; Wanzenried, Ursula; Schiess, Jeannette; Hurni, Monika; Weber, Thomas; Sendi, Parham; Thormann, Wolfgang (2016). Therapeutic drug monitoring of cefepime with micellar electrokinetic capillary chromatography: Assay improvement, quality assurance, and impact on patient drug levels. Journal of separation science, 39(13), pp. 2626-2632. Wiley-VCH 10.1002/jssc.201600271

Eyer, Myriam Marcelle; Läng, M; Aujesky, Drahomir; Marschall, Jonas (2016). Overtreatment of asymptomatic bacteriuria: a qualitative study. Journal of hospital infection, 93(3), pp. 297-303. Elsevier 10.1016/j.jhin.2016.04.007

Cag, Y; Erdem, H; Leib, Stephen; Defres, S; Kaya, S; Larsen, L; Poljak, M; Ozturk-Engin, D; Barsic, B; Argemi, X; Sørensen, S M; Bohr, A L; Tattevin, P; Gunst, J D; Baštáková, L; Jereb, M; Johansen, I S; Karabay, O; Pekok, A U; Sipahi, O R; ... (2016). Managing atypical and typical herpetic central nervous system infections: results of a multinational study. Clinical microbiology and infection, 22(6), 568.e9-568.e17. Blackwell Publishing 10.1016/j.cmi.2016.03.027

Wandeler, Gilles; Musukuma, Kalo; Zürcher, Samuel; Vinikoor, Michael J; Llenas-García, Jara; Aly, Mussa M; Mulenga, Lloyd; Chi, Benjamin H; Ehmer, Jochen; Hobbins, Michael A; Bolton-Moore, Carolyn; Hoffmann, Christopher J; Egger, Matthias (2016). Hepatitis B Infection, Viral Load and Resistance in HIV-Infected Patients in Mozambique and Zambia. PLoS ONE, 11(3), e0152043. Public Library of Science 10.1371/journal.pone.0152043

Ruff, S. Emil; Kuhfuss, Hanna; Wegener, Gunter; Lott, Christian; Ramette, Alban Nicolas; Wiedling, Johanna; Knittel, Katrin; Weber, Miriam (2016). Methane Seep in Shallow-Water Permeable Sediment Harbors High Diversity of Anaerobic Methanotrophic Communities, Elba, Italy. Frontiers in Microbiology, 7(374), p. 374. Frontiers 10.3389/fmicb.2016.00374

Fernández-López, David; Faustino, Joel; Klibanov, Alexander L; Derugin, Nikita; Blanchard, Elodie; Simon, Franziska; Leib, Stephen; Vexler, Zinaida S (2016). Microglial Cells Prevent Hemorrhage in Neonatal Focal Arterial Stroke. Journal of neuroscience, 36(10), pp. 2881-2893. Society for Neuroscience 10.1523/JNEUROSCI.0140-15.2016

Bürki, Sarah Elisabeth; Grandgirard, Denis; Datta, Alexandre N; Hackenberg, Annette; Martin, Florence; Schmitt-Mechelke, Thomas; Leib, Stephen L; Steinlin, Maja (2016). Inflammatory markers in pediatric stroke: An attempt to better understanding the pathophysiology. European journal of paediatric neurology, 20(2), pp. 252-260. Elsevier 10.1016/j.ejpn.2015.12.006

Béguelin, Charles Antoine; Vázquez, Miriam; Moradpour, Darius; Sahli, Roland; Suter, Franziska Marta; Rauch, Andri; Wandeler, Gilles (2016). Uncontrolled hepatitis delta virus infection after initial suppression on tenofovir in a HIV/HBV-coinfected patient. AIDS, 30(3), pp. 530-533. Lippincott Williams & Wilkins 10.1097/QAD.0000000000000972

Bally, Lia; Grandgirard, Denis; Leib, Stephen (2016). Inhibition of Hippocampal Regeneration by Adjuvant Dexamethasone in Experimental Infant Rat Pneumococcal Meningitis. Antimicrobial agents and chemotherapy, 60(3), pp. 1841-1846. American Society for Microbiology 10.1128/AAC.02429-15

Fortini, Daniela; Villa, Laura; Feudi, Claudia; Do Couto Pires, Joao Pedro; Bonura, Celestino; Mammina, Caterina; Endimiani, Andrea; Carattoli, Alessandra (2016). Double Copies of bla(KPC-3)::Tn4401a on an IncX3 Plasmid in Klebsiella pneumoniae Successful Clone ST512 from Italy. Antimicrobial agents and chemotherapy, 60(1), pp. 646-649. American Society for Microbiology 10.1128/AAC.01886-15

Viau, Roberto; Frank, Karen M.; Jacobs, Michael R.; Wilson, Brigid; Kaye, Keith; Donskey, Curtis J.; Perez, Federico; Endimiani, Andrea; Bonomo, Robert A. (2016). Intestinal Carriage of Carbapenemase-Producing Organisms: Current Status of Surveillance Methods. Clinical microbiology reviews, 29(1), pp. 1-27. American Society for Microbiology ASM 10.1128/CMR.00108-14

Hirzel, Cédric; Donà, Valentina; Guilarte, Yuvia; Furrer, Hansjakob; Marschall, Jonas; Endimiani, Andrea (2016). Clonal analysis of Aerococcus urinae isolates by using the repetitive extragenic palindromic PCR (rep-PCR). Journal of infection, 72(2), pp. 262-265. Elsevier 10.1016/j.jinf.2015.11.001

Hathaway, Lucy Jane; Grandgirard, Denis; Valente, Luca Gabriele; Täuber, Martin G.; Leib, Stephen (2016). Streptococcus pneumoniae capsule determines disease severity in experimental pneumococcal meningitis. Open Biology, 6(3) The Royal Society Publishing 10.1098/rsob.150269

Do Couto Pires, Joao Pedro; Tinguely, Regula; Bodmer, Thomas; Luzzaro, Francesco; Endimiani, Andrea (2016). Comparison of the in-house made Carba-NP and Blue-Carba tests: Considerations for better detection of carbapenemase-producing Enterobacteriaceae. Journal of microbiological methods, 122, pp. 33-37. Elsevier 10.1016/j.mimet.2016.01.002

Colapietro, Martina; Endimiani, Andrea; Sabatini, Alessia; Marcoccia, Francesca; Celenza, Giuseppe; Segatore, Bernardetta; Amicosante, Gianfranco; Perilli, Mariagrazia (2016). BlaB-15, a new BlaB metallo-β-lactamase variant found in an Elizabethkingia miricola clinical isolate. Diagnostic microbiology and infectious disease, 85(2), pp. 195-197. Elsevier 10.1016/j.diagmicrobio.2015.11.016

Villa, Laura; Feudi, Claudia; Fortini, Daniela; Iacono, Michele; Bonura, Celestino; Endimiani, Andrea; Mammina, Caterina; Carattoli, Alessandra (2016). Complete Genome Sequence of KPC-3- and CTX-M-15-Producing Klebsiella pneumoniae Sequence Type 307. Genome Announcements, 4(2) American Society for Microbiology 10.1128/genomeA.00213-16

Hatz, Christoph; Endimiani, Andrea; Kuenzli, Esther (2016). High colonization rates of ESBL-producing E. coli in Swiss Travellers to South Asia Switzerland: Swiss Center for Antibiotic Resistance (ANRESIS)

Zürcher, Patrick; Springe, Dirk; Grandgirard, Denis; Leib, Stephen; Grossholz, Marius; Jakob, Stephan; Takala, Jukka; Hänggi, Matthias (2016). A randomized trial of the effects of the noble gases helium and argon on neuroprotection in a rodent cardiac arrest model. BMC neurology, 16, p. 43. BioMed Central 10.1186/s12883-016-0565-8

Johnston, Calum; Hauser, Christoph; Hermans, Peter W.M.; Martin, Bernard; Polard, Patrice; Bootsma, Hester J.; Claverys, Jean-Pierre (2016). Fine-tuning of choline metabolism is important for pneumococcal colonization. Molecular microbiology, 100(6), pp. 972-988. Blackwell Science 10.1111/mmi.13360

Zimmermann, Petra Sabine; Mühlethaler, Konrad; Furrer, Hansjakob; Stähelin, Cornelia Johanna (2016). Travellers returning ill from the tropics – a descriptive retrospective study. Tropical Diseases, Travel Medicine and Vaccines, 2(1) BioMed Central 10.1186/s40794-016-0021-1

Baumgartner, Denja; Aebi, Susanne; Grandgirard, Denis; Leib, Stephen; Draeger, Annette; Babiychuk, Eduard; Hathaway, Lucy Jane (2016). Clinical Streptococcus pneumoniae isolates induce differing CXCL8 responses from human nasopharyngeal epithelial cells which are reduced by liposomes. BMC microbiology, 16(1), p. 154. BioMed Central 10.1186/s12866-016-0777-5

Cuenca Vera, Miguelangel; Pfister, Simona; Buschor, Stefanie; Bayramova, Firuza; Hernandez, Sara B.; Cava, Felipe; Kuru, Erkin; Van Nieuwenhze, Michael S.; Brun, Yves V.; Matos Coelho, Fernanda; Hapfelmeier, Siegfried Hektor (2016). D-Alanine-Controlled Transient Intestinal Mono-Colonization with Non-Laboratory-Adapted Commensal E. coli Strain HS. PLoS ONE, 11(3), e0151872. Public Library of Science 10.1371/journal.pone.0151872

Sendi, Parham; Uçkay, Ilker; Suvà, Domizio; Borens, Olivier; Clauss, Martin (2016). Antibiotic Prophylaxis During Dental Procedures in Patients with Prosthetic Joints. Journal of bone and joint infection, 1, pp. 42-49. Ivyspring International Publisher 10.7150/jbji.16318

Förster, Sunniva; Unemo, Magnus; Hathaway, Lucy J.; Low, Nicola; Althaus, Christian L. (2016). Time-kill curve analysis and pharmacodynamic modelling for in vitro evaluation of antimicrobials against Neisseria gonorrhoeae. BMC microbiology, 16, p. 216. BioMed Central 10.1186/s12866-016-0838-9

Pires, João; Kuenzli, Esther; Kasraian Fard, Sara; Tinguely, Regula; Furrer, Hansjakob; Hilty, Markus; Hatz, Christoph; Endimiani, Andrea (2016). Polyclonal Intestinal Colonization with Extended-Spectrum Cephalosporin-Resistant Enterobacteriaceae upon Traveling to India. Frontiers in Microbiology, 7(1069), p. 1069. Frontiers 10.3389/fmicb.2016.01069

Ruppen, Corinne; Lupo, Agnese; Decosterd, Laurent; Sendi, Parham (2016). Is Penicillin Plus Gentamicin Synergistic against Clinical Group B Streptococcus isolates?: An In vitro Study. Frontiers in Microbiology, 7(1680), p. 1680. Frontiers 10.3389/fmicb.2016.01680

Korten, Insa Christina Severine; Mika, Moana; Klenja, Shkipe; Kieninger, Elisabeth; Mack, Ines; Barbani, Maria Teresa; Gorgievski, Meri; Frey, Urs; Hilty, Markus; Latzin, Philipp (2016). Interactions of Respiratory Viruses and the Nasal Microbiota during the First Year of Life in Healthy Infants. mSphere, 1(6) American Society for Microbiology 10.1128/mSphere.00312-16

Bernasconi, Odette Joëlle; Kuenzli, Esther; Pires, João; Tinguely, Regula; Carattoli, Alessandra; Hatz, Christoph; Perreten, Vincent; Endimiani, Andrea (2016). Travelers Can Import Colistin-Resistant Enterobacteriaceae, Including Those Possessing the Plasmid-Mediated mcr-1 Gene. Antimicrobial agents and chemotherapy, 60(8), pp. 5080-5084. American Society for Microbiology 10.1128/AAC.00731-16

Endimiani, Andrea; Wright, Hugh (2016). Ceftazidime and ceftazidime/avibactam (In Press). In: Kucer’s Use of Antibiotics, 7th edition. London: Hodder Arnold

Moor, Kathrin; Wotzka, Sandra Y; Toska, Albulena; Diard, Médéric; Hapfelmeier, Siegfried Hektor; Slack, Emma (2016). Peracetic Acid Treatment Generates Potent Inactivated Oral Vaccines from a Broad Range of Culturable Bacterial Species. Frontiers in immunology, 7(34), p. 34. Frontiers Research Foundation 10.3389/fimmu.2016.00034

Olearo, Flaminia; Albrich, Werner C; Vernaz, Nathalie; Harbarth, Stephan; Kronenberg, Andreas (2016). Staphylococcus aureus and methicillin resistance in Switzerland: regional differences and trends from 2004 to 2014. Swiss medical weekly, 146(w14339), w14339. EMH Schweizerischer Ärzteverlag 10.4414/smw.2016.14339

Studer, Nicolas; Desharnais, Lyne; Beutler, Markus; Brugiroux, Sandrine; Terrazos Miani, Miguel Angel; Menin, Laure; Schürch, Christian; McCoy, Kathy D.; Kuehne, Sarah A.; Minton, Nigel P.; Stecher, Bärbel; Bernier-Latmani, Rizlan; Hapfelmeier, Siegfried Hektor (2016). Functional Intestinal Bile Acid 7α-Dehydroxylation by Clostridium scindens Associated with Protection from Clostridium difficile Infection in a Gnotobiotic Mouse Model. Frontiers in cellular and infection microbiology, 6(191), p. 191. Frontiers 10.3389/fcimb.2016.00191

Endimiani, Andrea; Sendi, Parham (2016). Cefepime, Cefpirome and Cefepime-Tazobactam (In Press). In: Kucer’s Use of Antibiotics (pp. 578-602). London: Hodder Arnold

Bienhold, Christina; Zinger, Lucie; Boetius, Antje; Ramette, Alban (2016). Diversity and Biogeography of Bathyal and Abyssal Seafloor Bacteria. PLoS ONE, 11(1), e0148016. Public Library of Science 10.1371/journal.pone.0148016

2015

Foerster, Sunniva; Golparian, Daniel; Jacobsson, Susanne; Hathaway, Lucy J; Low, Nicola; Shafer, William M; Althaus, Christian L; Unemo, Magnus (2015). Genetic Resistance Determinants, In Vitro Time-Kill Curve Analysis and Pharmacodynamic Functions for the Novel Topoisomerase II Inhibitor ETX0914 (AZD0914) in Neisseria gonorrhoeae. Frontiers in Microbiology, 6, p. 1377. Frontiers 10.3389/fmicb.2015.01377

Medaglini, Donata; Harandi, Ali M; Ottenhoff, Tom H M; Siegrist, Claire-Anne; VSV-Ebovac Consortium, ; Leib, Stephen (2015). Ebola vaccine R&D: Filling the knowledge gaps. Science translational medicine, 7(317), 317ps24. American Association for the Advancement of Science 10.1126/scitranslmed.aad3106

Chevalier, Claire; Stojanović, Ozren; Colin, Didier J; Suarez-Zamorano, Nicolas; Tarallo, Valentina; Veyrat-Durebex, Christelle; Rigo, Dorothée; Fabbiano, Salvatore; Stevanović, Ana; Hagemann, Stefanie Claudia; Montet, Xavier; Seimbille, Yann; Zamboni, Nicola; Hapfelmeier, Siegfried Hektor; Trajkovski, Mirko (2015). Gut Microbiota Orchestrates Energy Homeostasis during Cold. Cell, 163(6), pp. 1360-1374. Cell Press 10.1016/j.cell.2015.11.004

Pires, João; Siriwardena, Thissa N.; Stach, Michaela; Tinguely, Regula; Kasraian Fard, Sara; Luzzaro, Francesco; Leib, Stephen; Darbre, Tamis; Reymond, Jean-Louis; Endimiani, Andrea (2015). In Vitro Activity of the Novel Antimicrobial Peptide Dendrimer G3KL against Multidrug-Resistant Acinetobacter baumannii and Pseudomonas aeruginosa. Antimicrobial agents and chemotherapy, 59(12), pp. 7915-7918. American Society for Microbiology 10.1128/AAC.01853-15

Nogueira, Christiane Lourenço; Whipps, Christopher M; Matsumoto, Cristianne Kayoko; Chimara, Erica; Droz, Sara Christine; Tortoli, Enrico; de Freitas, Denise; Cnockaert, Margo; Palomino, Juan Carlos; Martin, Anandi; Vandamme, Peter; Leão, Sylvia Cardoso (2015). Mycobacterium saopaulense sp. nov., a rapidly growing mycobacterium closely related to members of the Mycobacterium chelonae--Mycobacterium abscessus group. International journal of systematic and evolutionary microbiology, 65(12), pp. 4403-4409. Society for General Microbiology SGM 10.1099/ijsem.0.000590

Pires, João; Taracila, Magdalena; Bethel, Christopher R; Doi, Yohei; Kasraian Fard, Sara; Tinguely, Regula; Sendi, Parham; Bonomo, Robert A; Endimiani, Andrea (2015). In vivo Evolution of CMY-2 to CMY-33 β-Lactamase in Escherichia coli ST131: Characterization of an Acquired Extended-Spectrum AmpC (ESAC) Conferring Resistance to Cefepime. Antimicrobial agents and chemotherapy, 59(12), pp. 7483-7488. American Society for Microbiology 10.1128/AAC.01804-15

Frick, Tamara; Springe, Dirk; Grandgirard, Denis; Leib, Stephen; Hänggi, Matthias (2015). An improved simple rat model for global cerebral ischaemia by induced cardiac arrest. Neurological research, 38(4), pp. 373-380. Maney 10.1179/1743132815Y.0000000090

Hasse, Barbara; Tarr, Philip E; Marques-Vidal, Pedro; Waeber, Gerard; Preisig, Martin; Mooser, Vincent; Valeri, Fabio; Djalali, Sima; Rauch, Andri; Bernasconi, Enos; Calmy, Alexandra; Cavassini, Matthias; Vernazza, Pietro; Battegay, Manuel; Weber, Rainer; Senn, Oliver; Vollenweider, Peter; Ledergerber, Bruno; Aubert, V; Barth, J; ... (2015). Strong Impact of Smoking on Multimorbidity and Cardiovascular Risk Among Human Immunodeficiency Virus-Infected Individuals in Comparison With the General Population. Open Forum Infectious Diseases, 2(3), ofv108. Oxford University Press 10.1093/ofid/ofv108

Hirzel, Cédric; Pfister, Stefan; Gorgievski, Meri; Wandeler, Gilles; Zürcher, Samuel (2015). Performance of HBsAg point-of-care tests for detection of diagnostic escape-variants in clinical samples. Journal of clinical virology, 69, pp. 33-35. Elsevier 10.1016/j.jcv.2015.05.024

Schüpbach, Jörg; Niederhauser, Christoph; Yerly, Sabine; Regenass, Stephan; Gorgievski, Meri; Aubert, Vincent; Ciardo, Diana; Klimkait, Thomas; Dollenmaier, Günter; Andreutti, Corinne; Martinetti, Gladys; Brandenberger, Marcel; Gebhardt, Martin D. (2015). Decreasing Proportion of Recent Infections among Newly Diagnosed HIV-1 Cases in Switzerland, 2008 to 2013 Based on Line-Immunoassay-Based Algorithms. PLoS ONE, 10(7), e0131828. Public Library of Science 10.1371/journal.pone.0131828

Beise, Uwe; Kronenberg, Andreas; Huber, Felix (2015). [Tick-borne illnesses - borreliosis and European tick-borne encephalitis]. Praxis - schweizerische Rundschau für Medizin, 104(15), pp. 807-811. Huber 10.1024/1661-8157/a002076

Schneider, Sarah; Tinguely, Regula; Droz, Sara Christine; Hilty, Markus; Donà, Valentina; Bodmer, Thomas; Endimiani, Andrea (2015). Antibiotic Susceptibility and Sequence Type Distribution of Ureaplasma Species Isolated from Genital Samples in Switzerland. Antimicrobial agents and chemotherapy, 59(10), pp. 6026-6031. American Society for Microbiology 10.1128/AAC.00895-15

Liechti, Fabian D; Grandgirard, Denis; Leib, Stephen (2015). Bacterial meningitis: insights into pathogenesis and evaluation of new treatment options: a perspective from experimental studies. Future microbiology, 10(7), pp. 1195-1213. Future Medicine 10.2217/fmb.15.43

Cusini, Alexia; Nydegger-Brechbühl, Doris; Kaspar, Tanja; Schweiger, Alexander; Kuhn, Rolf; Marschall, Jonas (2015). Improved hand hygiene compliance after eliminating mandatory glove use from contact precautions-Is less more? American journal of infection control, 43(9), pp. 922-927. Elsevier 10.1016/j.ajic.2015.05.019

Liechti, F D; Grandgirard, Denis; Leib, Stephen (2015). The antidepressant fluoxetine protects the hippocampus from brain damage in experimental pneumococcal meningitis. Neuroscience, 297, pp. 89-94. Elsevier 10.1016/j.neuroscience.2015.03.056

Osthoff, Michael; Egli, Adrian; Schürch, Nadia; Leib, Stephen; Mihatsch, Felix; Frei, Reno (2015). Ein nicht alltägliches türkisches Souvenir. Schweizerisches Medizin-Forum SMF / Swiss medical forum / Forum médical suisse FMS, 15(25), pp. 611-613. EMH Editores Medicorum Helveticorum

Grandgirard, Denis; Furi, Leonardo; Ciusa, Maria Laura; Baldassarri, Lucilla; Knight, Daniel R; Morrissey, Ian; Largiadèr, Carlo Rodolfo; Leib, Stephen; Oggioni, Marco R (2015). Mutations upstream of fabI in triclosan resistant Staphylococcus aureus strains are associated with elevated fabI gene expression. BMC Genomics, 16(345), p. 345. BioMed Central 10.1186/s12864-015-1544-y

Wohlwend, Nadia; Endimiani, Andrea; Francey, Thierry; Perreten, Vincent (2015). Third-Generation-Cephalosporin-Resistant Klebsiella pneumoniae Isolates from Humans and Companion Animals in Switzerland: Spread of a DHA-Producing Sequence Type 11 Clone in a Veterinary Setting. Antimicrobial agents and chemotherapy, 59(5), pp. 2949-2955. American Society for Microbiology 10.1128/AAC.04408-14

Wang, Junhua; Vuitton, Dominique A; Müller, Norbert; Hemphill, Andrew; Spiliotis, Markus; Blagosklonov, Oleg; Grandgirard, Denis; Leib, Stephen; Shalev, Itay; Levy, Gary; Lu, Xiaomei; Lin, Renyong; Wen, Hao; Gottstein, Bruno (2015). Deletion of Fibrinogen-like Protein 2 (FGL-2), a Novel CD4+ CD25+ Treg Effector Molecule, Leads to Improved Control of Echinococcus multilocularis Infection in Mice. PLoS neglected tropical diseases, 9(5), e0003755. Public Library of Science 10.1371/journal.pntd.0003755

Hirzel, Cédric; Guilarte, Yuvia N; Hirzberger, Lea; Furrer, Hansjakob; Marschall, Jonas; Endimiani, Andrea (2015). In vitro susceptibility of Aerococcus urinae isolates to antibiotics used for uncomplicated urinary tract infection. Journal of infection, 71(3), pp. 395-397. Elsevier 10.1016/j.jinf.2015.04.020

Pilo, Paola; Vogt, Debora; Origgi, Francesco C; Endimiani, Andrea; Peterson, Susanne; Perreten, Vincent (2015). First report of a multidrug-resistant Klebsiella pneumoniae of sequence type 11 causing sepsis in a free-ranging beaver (Castor fiber). Environmental Microbiology Reports, 7(2), pp. 351-353. Wiley 10.1111/1758-2229.12257

Kouyos, Roger D; Hasse, Barbara; Calmy, Alexandra; Cavassini, Matthias; Furrer, Hansjakob; Stöckle, Marcel; Vernazza, Pietro L; Bernasconi, Enos; Weber, Rainer; Günthard, Huldrych F; Aubert, V; Battegay, M; Bernasconi, E; Böni, J; Bucher, H C; Burton-Jeangros, C; Calmy, A; Cavassini, M; Dollenmaier, G; Egger, M; ... (2015). Increases in Condomless Sex in the Swiss HIV Cohort Study. Open Forum Infectious Diseases, 2(2), ofv077. Oxford University Press 10.1093/ofid/ofv077

Spaniol, Violeta; Bernhard, Sara; Aebi, Christoph (2015). Moraxella catarrhalis AcrAB-OprM efflux pump contributes to antimicrobial resistance and is enhanced during cold shock response. Antimicrobial agents and chemotherapy, 59(4), pp. 1886-1894. American Society for Microbiology 10.1128/AAC.03727-14

Lupo, Agnese; Isis, Enver; Tinguely, Regula; Endimiani, Andrea (2015). Clonality and Antimicrobial Susceptibility of Burkholderia cepacia complex Isolates Collected from Cystic Fibrosis Patients during 1998-2013 in Bern, Switzerland. The new microbiologica, 38(2), pp. 281-288. Edizioni Medico Scientifiche

Mika, Moana; Mack, Ines; Korten, Insa Christina Severine; Qi, Weihong; Aebi, Susanne; Frey, Urs Peter; Latzin, Philipp; Hilty, Markus (2015). Dynamics of the nasal microbiota in infancy: A prospective cohort study. Journal of allergy and clinical immunology, 135(4), 905-912.e11. Mosby 10.1016/j.jaci.2014.12.1909

Kamber, C; Zimmerli, Stefan; Suter, Franziska Marta; Müller, Beatrice Ursula; Mansouri Taleghani, Behrouz; Betticher, Daniel; Zander, T; Pabst, Thomas (2015). Varicella zoster virus reactivation after autologous SCT is a frequent event and associated with favorable outcome in myeloma patients. Bone marrow transplantation, 50(4), pp. 573-578. Nature Publishing Group 10.1038/bmt.2014.290

Bendel, Stepani; Springe, Dirk; Pereira, Adriano José; Grandgirard, Denis; Leib, Stephen; Putzu, Alessandro; Schlickeiser, Jannis; Jakob, Stephan M.; Takala, Jukka; Hänggi, Matthias (2015). Do different anesthesia regimes affect hippocampal apoptosis and neurologic deficits in a rodent cardiac arrest model? BMC anesthesiology, 15(2), p. 2. BioMed Central 10.1186/1471-2253-15-2

Hochreiter, Werner; Braegger, Cp; Buehr, P; Koller, Roger; Nydegger, A; Spalinger, Johannes; Heyland, K; Schibli, Susanne; Meyer-Landolt, Lukas (2015). Shorter time since inflammatory bowel disease diagnosis in children is associated with lower mental health in parents. Acta paediatrica, 104(1), e32-e38. Wiley 10.1111/apa.12781

Strauss, Christian; Endimiani, Andrea; Perreten, Vincent (2015). A novel universal DNA labeling and amplification system for rapid microarray-based detection of 117 antibiotic resistance genes in Gram-positive bacteria. Journal of microbiological methods, 108, pp. 25-30. Elsevier 10.1016/j.mimet.2014.11.006

Lupo, Agnese; Isis, Enver; Perreten, Vincent; Endimiani, Andrea (2015). Raw meat contaminated with epidemic clones of Burkholderia multivorans found in cystic fibrosis patients. Journal of cystic fibrosis, 14(1), pp. 150-152. Elsevier 10.1016/j.jcf.2014.07.001

Sendi, Parham; Fröhlicher, Simone (2015). Association between capsular serotype V and macrolide resistance in group B Streptococcus. Epidemiology and infection, 143(4), pp. 754-756. Cambridge University Press 10.1017/S0950268814001320

Schopfer, K; Rieder, H L; Steinlin-Schopfer, J F; van Soolingen, D; Bodmer, T; Chantana, Y; Studer, P; Laurent, D; Zwahlen, M; Richner, B (2015). Molecular epidemiology of tuberculosis in Cambodian children. Epidemiology and infection, 143(5), pp. 910-21. Cambridge University Press 10.1017/S0950268814001769

Stucki, David; Ballif, Marie; Bodmer, Thomas; Coscolla, Mireia; Maurer, Anne-Marie; Droz, Sara Christine; Butz, Christa; Borrell, Sonia; Längle, Christel; Feldmann, Julia; Furrer, Hansjakob; Mordasini, Carlo; Helbling, Peter; Rieder, Hans L; Egger, Matthias; Gagneux, Sébastien; Fenner, Lukas (2015). Tracking a tuberculosis outbreak over 21 years: strain-specific single nucleotide polymorphism-typing combined with targeted whole genome sequencing. Journal of infectious diseases, 211(8), pp. 1306-1316. Oxford University Press 10.1093/infdis/jiu601

Liechti, Fabian D; Bächtold, Fabian; Grandgirard, Denis; Leppert, David; Leib, Stephen (2015). The matrix metalloproteinase inhibitor RS-130830 attenuates brain injury in experimental pneumococcal meningitis. Journal of neuroinflammation, 12(43), p. 43. BioMed Central 10.1186/s12974-015-0257-0

Gebreselassie, Hiwot Mamo; Kaspar, Tanja; Droz, Sara Christine; Marschall, Jonas (2015). Low Yield of Methicillin-Resistant Staphylococcus aureus Screening in Hemodialysis Patients: 10 Years' Experience. Infection control and hospital epidemiology, 36(9), pp. 1046-1049. Cambridge University Press 10.1017/ice.2015.117

Kaspar, Tanja; Schweiger, Alexander; Droz, Sara Christine; Marschall, Jonas (2015). Colonization with resistant microorganisms in patients transferred from abroad: who needs to be screened? Antimicrobial Resistance and Infection Control, 4(31), p. 31. BioMed Central 10.1186/s13756-015-0071-6

Fontes, Fabrícia Lima; de Araújo, Luíza Ferreira; Coutinho, Leonam Gomes; Leib, Stephen; Agnez-Lima, Lucymara Fassarella (2015). Genetic polymorphisms associated with the inflammatory response in bacterial meningitis. BMC medical genetics, 16(70), p. 70. BioMed Central 10.1186/s12881-015-0218-6

Vinikoor, Michael J.; Zürcher, Samuel; Musukuma, Kalo; Kachuwaire, Obert; Rauch, Andri; Chi, Benjamin H.; Gorgievski, Meri; Zwahlen, Marcel; Wandeler, Gilles (2015). Hepatitis B viral load in dried blood spots: A validation study in Zambia. Journal of clinical virology, 72, pp. 20-24. Elsevier 10.1016/j.jcv.2015.08.019

Hirzel, Cédric; Wandeler, Gilles; Owczarek, Marta; Gorgievski, Meri; Dufour, Jean-François; Semmo, Nasser; Zürcher, Samuel (2015). Molecular epidemiology of hepatitis B virus infection in Switzerland: a retrospective cohort study. BMC infectious diseases, 15(1), p. 483. BioMed Central 10.1186/s12879-015-1234-z

Carattoli, Alessandra; Seiffert, Salome Nadja; Schwendener, Sybille; Perreten, Vincent; Endimiani, Andrea (2015). Differentiation of IncL and IncM Plasmids Associated with the Spread of Clinically Relevant Antimicrobial Resistance. PLoS ONE, 10(5), e0123063. Public Library of Science 10.1371/journal.pone.0123063

Lupo, Agnese; Papp-Wallace, Krisztina M.; Bonomo, Robert A.; Endimiani, Andrea (2015). Non-Phenotypic Tests to Detect and Characterize Antibiotic Resistance Mechanisms in Enterobacteriaceae. In: Chen, Chin-Yi; Yan, Xianghe; Jackson, Charlene R. (eds.) Antimicrobial Resistance and Food Safety: Methods and Techniques (pp. 233-257). Elsevier 10.1016/B978-0-12-801214-7.00012-0

Oggioni, Marco R; Coelho, Joana Rosado; Furi, Leonardo; Knight, Daniel R; Viti, Carlo; Orefici, Graziella; Martinez, Jose-Luis; Freitas, Ana Teresa; Coque, Teresa M; Morrissey, Ian; BIOHYPO consortium, ; Leib, Stephen (2015). Significant Differences Characterise the Correlation Coefficients between Biocide and Antibiotic Susceptibility Profiles in Staphylococcus aureus. Current pharmaceutical design, 21(16), pp. 2054-2057. Bentham Science Publishers 10.2174/1381612821666150310103238

Raulf, Felix F.; Fabricius, Katharina; Uthicke, Sven; de Beer, Dirk; Abed, Raeid M. M.; Ramette, Alban Nicolas (2015). Changes in microbial communities in coastal sediments along natural CO 2 gradients at a volcanic vent in Papua New Guinea. Environmental microbiology, 17(10), pp. 3678-3691. Wiley-Blackwell 10.1111/1462-2920.12729

Ruff, S. Emil; Biddle, Jennifer F.; Teske, Andreas P.; Knittel, Katrin; Boetius, Antje; Ramette, Alban Nicolas (2015). Global dispersion and local diversification of the methane seep microbiome. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 112(13), pp. 4015-4020. National Academy of Sciences NAS 10.1073/pnas.1421865112

Ionescu, Danny; Heim, Christine; Polerecky, Lubos; Ramette, Alban Nicolas; Haeusler, Stefan; Bizic-Ionescu, Mina; Thiel, Volker; de Beer, Dirk (2015). Diversity of Iron Oxidizing and Reducing Bacteria in Flow Reactors in the Äspö Hard Rock Laboratory. Geomicrobiology Journal, 32(3-4), pp. 207-220. Taylor & Francis 10.1080/01490451.2014.884196

Buttigieg, Pier Luigi; Ramette, Alban Nicolas (2015). Biogeographic patterns of bacterial microdiversity in Arctic deep-sea sediments (HAUSGARTEN, Fram Strait). Frontiers in Microbiology, 5, p. 660. Frontiers 10.3389/fmicb.2014.00660

2014

Ricci, Susanna; Grandgirard, Denis; Wenzel, Michael; Braccini, Tiziana; Salvatore, Paola; Oggioni, Marco R; Leib, Stephen; Koedel, Uwe (2014). Inhibition of matrix metalloproteinases attenuates brain damage in experimental meningococcal meningitis. BMC infectious diseases, 14(726), p. 726. BioMed Central 10.1186/s12879-014-0726-6

Hauser, Christoph; Hirzberger, Lea; Unemo, Magnus; Furrer, Hansjakob; Endimiani, Andrea (2014). In vitro Activity of Fosfomycin Alone and in Combination with Ceftriaxone or Azithromycin Against Clinical Neisseria gonorrhoeae Isolates. Antimicrobial agents and chemotherapy, 59(3), pp. 1605-1611. American Society for Microbiology 10.1128/AAC.04536-14

Hilty, Markus; Wüthrich, Daniel; Salter, Susannah J; Engel, Hans Jürg; Campbell, Samuel; Sá-Leão, Raquel; de Lencastre, Hermínia; Hermans, Peter; Sadowy, Ewa; Turner, Paul; Chewapreecha, Claire; Diggle, Mathew; Pluschke, Gerd; McGee, Lesley; Eser, Ozgen Köseoğlu; Low, Donald E; Smith-Vaughan, Heidi; Endimiani, Andrea; Küffer, Marianne; Dupasquier, Mélanie; ... (2014). Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages. Genome biology and evolution, 6(12), pp. 3281-3294. Oxford University Press 10.1093/gbe/evu263

Pauli, Urs; Karlen, Stephane; Summermatter, Kathrin (2014). The Importance of Fit-Testing Particulate Filtering Facepiece Respirators! Applied biosafety, 19(4), pp. 184-192. Mary Ann Liebert 10.1177/153567601401900402

Maffioli, Carola; Grandgirard, Denis; Engler, Olivier; Leib, Stephen (2014). A tick-borne encephalitis model in infant rats infected with langat virus. Journal of neuropathology and experimental neurology, 73(12), pp. 1107-1115. Lippincott Williams & Wilkins 10.1097/NEN.0000000000000131

Cangiano, Giulia; Proietti, Elena; Kronig, Marie Noelle; Kieninger, Elisabeth; Sadeghi, Christine D; Gorgievski, Meri; Barbani, Maria Teresa; Midulla, Fabio; Tapparel, Caroline; Kaiser, Laurent; Alves, Marco P; Regamey, Nicolas (2014). Lactate dehydrogenase concentration in nasal wash fluid indicates severity of rhinovirus-induced wheezy bronchitis in preschool children. The Pediatric infectious disease journal, 33(12), pp. 1285-1287. Lippincott Williams & Wilkins 10.1097/INF.0000000000000420

Casanova, Carlo; Schweiger, Alexander; von Steiger, Niklaus; Droz, Sara Christine; Marschall, Jonas (2014). Campylobacter concisus pseudo-outbreak caused by improved culture conditions. Journal of clinical microbiology, 53(2), pp. 660-662. American Society for Microbiology 10.1128/JCM.02608-14

Balmer, Maria L; Schürch, Christian; Saito, Yasuyuki; Geuking, Markus; Li, Hai; Cuenca, Miguelangel; Kovtonyuk, Larisa V; McCoy, Kathleen; Hapfelmeier, Siegfried; Ochsenbein, Adrian; Manz, Markus G; Slack, Emma; Macpherson, Andrew (2014). Microbiota-derived compounds drive steady-state granulopoiesis via MyD88/TICAM signaling. Journal of immunology, 193(10), pp. 5273-5283. American Association of Immunologists 10.4049/jimmunol.1400762

Morf, Laura Ursina; Beyeler, Seraina Martina; Mika, Moana; Bernasconi, Eric; Marsland, Benjamin; Hilty, Markus; Von Garnier, Christophe (5 November 2014). Dysregulation of the lung microbiota in chronic obstructive pulmonary disease (Unpublished). In: Day of Clinical Research. Bern. 05.11.2014.

Morf, Laura Ursina; Beyeler, Seraina Martina; Mika, Moana; Bernasconi, Eric; Marsland, Benjamin; Hilty, Markus; Von Garnier, Christophe (5 November 2014). Dysregulation of the lung microbiota in chronic obstructive pulmonary disease (Unpublished). In: Day of Clinical Research. Bern. 05.11.2014.

Lupo, Agnese; Vogt, Debora; Seiffert, Salome Nadja; Endimiani, Andrea; Perreten, Vincent (2014). Antibiotic resistance and phylogenetic characterization of Acinetobacter baumannii strains isolated from commercial raw meat in Switzerland. Journal of food protection, 77(11), pp. 1976-1981. International Association for Food Protection 10.4315/0362-028X.JFP-14-073

Coutinho, Leonam G; Christen, Stephan; Bellac, Caroline L; Fontes, Fabrícia; de Souza, Fladjule; Grandgirard, Denis; Leib, Stephen; Agnez-Lima, Lucymara F (2014). The kynurenine pathway is involved in bacterial meningitis. Journal of neuroinflammation, 11(169), p. 169. BioMed Central 10.1186/s12974-014-0169-4

Lupo, Agnese; Guilarte, Yuvia N; Droz, Sara Christine; Hirzel, Cédric; Furrer, Hansjakob; Endimiani, Andrea (2014). In vitro activity of clinically implemented β-lactams against Aerococcus urinae: presence of non-susceptible isolates in Switzerland. The new microbiologica, 37(4), pp. 563-566. Edizioni Medico Scientifiche

Theurillat, Regula; Larenza, M Paula; Feige, Karsten; Bettschart-Wolfensberger, Regula; Thormann, Wolfgang (2014). Development of a method for analysis of ketamine and norketamine enantiomers in equine brain and cerebrospinal fluid by capillary electrophoresis. Electrophoresis, 35(19), pp. 2863-2869. Wiley-VCH 10.1002/elps.201400093

Thormann, Wolfgang; Chankvetadze, Lali; Gumustas, Mehmet; Chankvetadze, Bezhan (2014). Dynamic computer simulation of electrophoretic enantiomer migration order and separation in presence of a neutral cyclodextrin. Electrophoresis, 35(19), pp. 2833-2841. Wiley-VCH 10.1002/elps.201400193

Schaffner, Thierry Oliver; Hinds, Jason; Gould, Katherine A; Wüthrich, Daniel; Bruggmann, Rémy; Küffer, Marianne; Mühlemann, Kathrin; Hilty, Markus; Hathaway, Lucy Jane (2014). A point mutation in cpsE renders Streptococcus pneumoniae nonencapsulated and enhances its growth, adherence and competence. BMC microbiology, 14(210), p. 210. BioMed Central 10.1186/s12866-014-0210-x

Meichtry, Jurka; Born, Rita; Küffer, Marianne; Zwahlen, Marcel; Albrich, Werner C.; Brugger, Silvio; Mühlemann, Kathrin; Hilty, Markus (2014). Serotype epidemiology of invasive pneumococcal disease in Swiss adults: A nationwide population-based study. Vaccine, 32(40), pp. 5185-5191. Elsevier 10.1016/j.vaccine.2014.07.060

Seiffert, Salome Nadja; Marschall, Jonas; Perreten, Vincent; Carattoli, Alessandra; Furrer, Hansjakob; Endimiani, Andrea (2014). Emergence of Klebsiella pneumoniae co-producing NDM-1, OXA-48, CTX-M-15, CMY-16, QnrA and ArmA in Switzerland. International journal of antimicrobial agents, 44(3), pp. 260-262. Elsevier 10.1016/j.ijantimicag.2014.05.008

Zysset-Burri, Denise Corinne; Müller, Norbert; Beuret, Christian; Heller, Manfred; Schürch, Nadia; Gottstein, Bruno; Wittwer, Matthias (2014). Genome-wide identification of pathogenicity factors of the free-living amoeba Naegleria fowleri. BMC Genomics, 15(1), p. 496. BioMed Central 10.1186/1471-2164-15-496

Bittel, Pascal; Mayor, Désirée; Iseli, P; Bodmer, T; Suter-Riniker, Franziska (2014). IGRA-positive patients and interferon-gamma/interleukin-2 signatures: can the Fluorospot assay provide further information? Infection, 42(3), pp. 539-543. Springer-Medizin-Verlag 10.1007/s15010-014-0588-2

Agyeman, Philipp; Grandgirard, Denis; Leib, Stephen (2014). Pathogenesis and Pathophysiology of Bacterial Infections. In: Scheld, Michael; Whitley, Richard J.; Marra, Christina M. (eds.) Infections of the Central Nervous System (pp. 341-364). Philadelphia, PA, USA: Lippincott Williams & Wilkins

Lupo, Agnese; Ruppen, Corinne; Hemphill, Andrew; Spellerberg, Barbara; Sendi, Parham (2014). Phenotypic and molecular characterization of hyperpigmented group B Streptococci. International journal of medical microbiology IJMM, 304(5-6), pp. 717-724. Elsevier 10.1016/j.ijmm.2014.05.003

Müller, Andrea Martin; Henle, Ariane; Droz, Sara Christine; Kind, Andre B.; Rohner, Susanne; Baumann, Marc; Surbek, Daniel (2014). Intrapartum detection of Group B streptococci colonization by rapid PCR-test on labor ward. European journal of obstetrics & gynecology and reproductive biology, 176, pp. 137-141. Elsevier 10.1016/j.ejogrb.2014.02.039

Vogt, Debora; Overesch, Gudrun; Endimiani, Andrea; Collaud, Alexandra; Thomann, Andreas; Perreten, Vincent (2014). Occurrence and Genetic Characteristics of Third-Generation Cephalosporin-Resistant Escherichia coli in Swiss Retail Meat. Microbial drug resistance, 20(5), pp. 485-494. Mary Ann Liebert 10.1089/mdr.2013.0210

Engel, Hans Jürg; Mika, Moana; Denapaite, Dalia; Hakenbeck, Regine; Mühlemann, Kathrin; Heller, Manfred; Hathaway, Lucy Jane; Hilty, Markus (2014). A low affinity penicillin-binding protein 2x is required for heteroresistance in Streptococcus pneumoniae. Antimicrobial agents and chemotherapy, 58(7), pp. 3934-3941. American Society for Microbiology 10.1128/AAC.02547-14

Hathaway, Lucy J.; Bättig, Patrick; Reber, Sandra; Rotzetter, Jeannine Ursula; Aebi, Susanne; Hauser, Christoph; Heller, Manfred; Kadioglu, Aras; Mühlemann, Kathrin (2014). Streptococcus pneumoniae detects and responds to foreign bacterial peptide fragments in its environment. Open Biology, 4(130224), p. 130224. The Royal Society Publishing 10.1098/rsob.130224

Endimiani, Andrea (2014). Ad-hoc consultation on rapid methods for antimicrobial susceptibility testing at point-of-care in lower- and middle-Income Countries Geneva: World Health Organization (WHO)

Seiffert, Salome Nadja; Perreten, Vincent; Johannes, Sönke; Droz, Sara Christine; Bodmer, Thomas; Endimiani, Andrea (2014). OXA-48 carbapenemase-producing Salmonella enterica serovar Kentucky isolate of sequence type 198 in a patient transferred from Libya to Switzerland. Antimicrobial agents and chemotherapy, 58(4), pp. 2446-2449. American Society for Microbiology 10.1128/AAC.02417-13

Liechti, Fabian D; Grandgirard, Denis; Leppert, David; Leib, Stephen (2014). Matrix metalloproteinase inhibition lowers mortality and brain injury in experimental pneumococcal meningitis. Infection and immunity, 82(4), pp. 1710-1718. American Society for Microbiology 10.1128/IAI.00073-14

Agyeman, Philipp; Kontny, Udo; Nadal, David; Leibundgut, Kurt; Niggli, Felix; Simon, Arne; Kronenberg, Andreas; Frei, Reno; Escobar, Hugo; Kühne, Thomas; Beck-Popovic, Maja; Bodmer, Nicole; Ammann, Roland A. (2014). A Prospective Multicenter SPOG 2003 FN Study of Microbiologically Defined Infections in Pediatric Cancer Patients with Fever and Neutropenia. The Pediatric infectious disease journal, 33(9), e219-e225. Lippincott Williams & Wilkins 10.1097/INF.0000000000000326

Küng, Eliane; Coward, William R.; Neill, Daniel R.; Malak, Hesham A.; Mühlemann, Kathrin; Kadioglu, Aras; Hilty, Markus; Hathaway, Lucy Jane (2014). The Pneumococcal Polysaccharide Capsule and Pneumolysin Differentially Affect CXCL8 and IL-6 Release from Cells of the Upper and Lower Respiratory Tract. PLoS ONE, 9(3), e92355. Public Library of Science 10.1371/journal.pone.0092355

Bratschi, Martin W.; Ruf, Marie-Thérèse; Andreoli, Arianna; Minyem, Jacques C.; Kerber, Sarah; Wantong, Fidèle G.; Pritchard, James; Chakwera, Victoria; Beuret, Christian; Wittwer, Matthias; Noumen, Djeunga; Schürch, Nadia; Um Book, Alphonse; Pluschke, Gerd (2014). Mycobacterium ulcerans persistence at a village water source of Buruli ulcer patients. PLoS neglected tropical diseases, 8(3), e2756. Public Library of Science 10.1371/journal.pntd.0002756

Lüer, Sonja; Götte, Jeannette; Troller, Rolf; Aebi, Christoph (2014). Synthetic versus natural curcumin: bioequivalence in an in vitro oral mucositis model. BMC complementary and alternative medicine, 14(1), p. 53. BioMed Central 10.1186/1472-6882-14-53

Pomba, Constança; Endimiani, Andrea; Rossano, Alexandra; Saial, Dolores; Couto, Natacha; Perreten, Vincent (2014). First report of OXA-23-mediated carbapenem resistance in sequence type 2 multidrug-resistant Acinetobacter baumannii associated with urinary tract infection in a cat. Antimicrobial agents and chemotherapy, 58(2), pp. 1267-1268. American Society for Microbiology 10.1128/AAC.02527-13

Stojkovic, Marko; Koenka, Israel Joel; Thormann, Wolfgang; Hauser, Peter C (2014). Contactless conductivity detector array for capillary electrophoresis. Electrophoresis, 35(4), pp. 482-486. Wiley-VCH 10.1002/elps.201300457

Hirt-Minkowski, Patricia; Marti, Hans-Peter; Hönger, Gideon; Grandgirard, Denis; Leib, Stephen; Amico, Patrizia; Schaub, Stefan (2014). Correlation of serum and urinary matrix metalloproteases/tissue inhibitors of metalloproteases with subclinical allograft fibrosis in renal transplantation. Transplant immunology, 30(1), pp. 1-6. Elsevier 10.1016/j.trim.2013.11.004

Fröhlicher, Simone; Reichen, Gabriela; Droz, Sara Christine; Sendi, Parham (2014). Detection of inducible clindamycin resistance in group B Streptococcus: does the distance between the disks matter? Journal of medical microbiology, 63(Pt_3), pp. 478-479. SGM 10.1099/jmm.0.068874-0

Endimiani, Andrea; Guilarte, Yuvia; Tinguely, Regula; Hirzberger, Lea; Selvini, Sylvia; Lupo, Agnese; Hauser, Christoph; Furrer, Hansjakob (2014). Characterization of Neisseria gonorrhoeae isolates detected in Switzerland (1998–2012): emergence of multidrug-resistant clones less susceptible to cephalosporins. BMC infectious diseases, 14(1), pp. 106-116. BioMed Central 10.1186/1471-2334-14-106

Fröhlicher, Simone; Reichen-Fahrni, G.; Müller, Andrea Martin; Surbek, Daniel; Droz, Sara Christine; Spellerberg, B.; Sendi, Parham (2014). Serotype distribution and antimicrobial susceptibility of group B streptococci in pregnant women: results from a Swiss tertiary centre. Swiss medical weekly, 144, w13935. EMH Schweizerischer Ärzteverlag 10.4414/smw.2014.13935

Holler, Jon G.; Brandt, Christian T.; Leib, Stephen L.; Rowland, Ian J.; Ostergaard, Christian (2014). Increase in hippocampal water diffusion and volume during experimental pneumococcal meningitis is aggravated by bacteremia. BMC infectious diseases, 14(1), p. 240. BioMed Central 10.1186/1471-2334-14-240

Küng, Eliane (2014). The importance of pneumococcal capsule in inate immunity and biofilm formation (Unpublished). (Dissertation, Universität Bern, Graduate School for Cellular and Biomedical Sciences)

Kuenzli, Esther; Jaeger, Veronika K; Frei, Reno; Neumayr, Andreas; DeCrom, Susan; Haller, Sabine; Blum, Johannes; Widmer, Andreas F; Furrer, Hansjakob; Battegay, Manuel; Endimiani, Andrea; Hatz, Christoph (2014). High colonization rates of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli in Swiss Travellers to South Asia- a prospective observational multicentre cohort study looking at epidemiology, microbiology and risk factors. BMC infectious diseases, 14(528), p. 528. BioMed Central 10.1186/1471-2334-14-528

Sprenger, Katharina; Evison, John Marc; Zwahlen, Marcel; Vogt, Cedric M; Elzi, Maria Verena; Hauser, Christoph; Furrer, Hansjakob; Low, Nicola (2014). Sexually transmitted infections in HIV-infected people in Switzerland: cross-sectional study. PeerJ, 2, e537. PeerJ 10.7717/peerj.537

Eggimann, Gabriela A.; Blattes, Emilyne; Buschor, Stefanie; Biswas, Rasomoy; Kammer, Stephan M.; Darbre, Tamis; Reymond, Jean-Louis (2014). Designed cell penetrating peptide dendrimers efficiently internalize cargo into cells. Chemical communications, 50(55), pp. 7254-7257. Royal Society of Chemistry 10.1039/C4CC02780A

Liechti, Fabian D; Stüdle, Nicolas; Theurillat, Regula; Grandgirard, Denis; Thormann, Wolfgang; Leib, Stephen (2014). The mood-stabilizer lithium prevents hippocampal apoptosis and improves spatial memory in experimental meningitis. PLoS ONE, 9(11), e113607. Public Library of Science 10.1371/journal.pone.0113607

Baranger, Kévin; Rivera, Santiago; Liechti, Fabian D; Grandgirard, Denis; Bigas, Judit; Seco, Jesús; Tarrago, Teresa; Leib, Stephen; Khrestchatisky, Michel (2014). Endogenous and synthetic MMP inhibitors in CNS physiopathology. In: Dityatev, Alexander; Wehrle-Haller, Bernhard; Pitkänen, Asla (eds.) Brain Extracellular Matrix in Health and Disease. Progress in Brain Research: Vol. 214 (pp. 313-351). Elsevier 10.1016/B978-0-444-63486-3.00014-1

Hasse, B.; Iff, M.; Ledergerber, B.; Calmy, A.; Schmid, P.; Hauser, Christoph; Cavassini, M.; Bernasconi, E.; Marzolini, C.; Tarr, P. E.; Swiss HIV, Cohort Study; Furrer, Hansjakob; Gorgievski, Meri; Rauch, Andri; Stähelin, Cornelia Johanna (2014). Obesity Trends and Body Mass Index Changes After Starting Antiretroviral Treatment: The Swiss HIV Cohort Study. Open Forum Infectious Diseases, 1(2), ofu040. Oxford University Press 10.1093/ofid/ofu040

Seiffert, Salome Nadja; Carattoli, Alessandra; Tinguely, Regula; Lupo, Agnese; Perreten, Vincent; Endimiani, Andrea (2014). High Prevalence of Extended-Spectrum β-Lactamase, Plasmid-Mediated AmpC and Carbapenemase genes in Food for Pets. Antimicrobial agents and chemotherapy, 58(10), pp. 6320-6323. American Society for Microbiology 10.1128/AAC.03185-14

Vetter, Beatrice N; Orlowski, Vanessa; Fransen, Katrien; Niederhauser, Christoph; Aubert, Vincent; Brandenberger, Marcel; Ciardo, Diana; Dollenmaier, Günter; Klimkait, Thomas; Regenass, Stephan; Schmid, Patrick; Schottstedt, Volkmar; Suter-Riniker, Franziska; Yerly, Sabine; Shah, Cyril; Böni, Jürg; Schüpbach, Jörg (2014). Generation of a recombinant Gag virus-like-particle panel for the evaluation of p24 antigen detection by diagnostic HIV tests. PLoS ONE, 9(10), e111552. Public Library of Science 10.1371/journal.pone.0111552

Morard, Isabelle; Clément, Sophie; Calmy, Alexandra; Mangia, Alessandra; Cerny, Andrea; De Gottardi, Andrea; Gorgievski, Meri; Heim, Markus; Malinverni, Raffaele; Moradpour, Darius; Müllhaupt, Beat; Semela, David; Pascarella, Stéphanie; Bochud, Pierre-Yves; Negro, Franco (2014). Clinical significance of the CCR5delta32 allele in hepatitis C. PLoS ONE, 9(9), e106424. Public Library of Science 10.1371/journal.pone.0106424

Zimmermann, Judith; Lott, Christian; Weber, Miriam; Ramette, Alban Nicolas; Bright, Monika; Dubilier, Nicole; Petersen, Jillian M. (2014). Dual symbiosis with co-occurring sulfur-oxidizing symbionts in vestimentiferan tubeworms from a Mediterranean hydrothermal vent. Environmental microbiology, 16(12), pp. 3638-3656. Wiley-Blackwell 10.1111/1462-2920.12427

Buttigieg, Pier Luigi; Ramette, Alban Nicolas (2014). A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses. FEMS Microbiology Ecology, 90(3), pp. 543-550. Wiley 10.1111/1574-6941.12437

Zinger, L.; Boetius, A.; Ramette, Alban Nicolas (2014). Bacterial taxa-area and distance-decay relationships in marine environments. Molecular Ecology, 23(4), pp. 954-964. Wiley-Blackwell 10.1111/mec.12640

Al-Najjar, Mohammad A. A.; Ramette, Alban Nicolas; Kühl, Michael; Hamza, Waleed; Klatt, Judith M.; Polerecky, Lubos (2014). Spatial patterns and links between microbial community composition and function in cyanobacterial mats. Frontiers in Microbiology, 5(406), p. 406. Frontiers 10.3389/fmicb.2014.00406

Ramette, Alban Nicolas; Buttigieg, Pier Luigi (2014). The R package otu2ot for implementing the entropy decomposition of nucleotide variation in sequence data. Frontiers in Microbiology, 5(601) Frontiers 10.3389/fmicb.2014.00601

2013

Seiffert, Salome N.; Tinguely, Regula; Lupo, Agnese; Neuwirth, Catherine; Perreten, Vincent; Endimiani, Andrea (2013). High prevalence of extended-spectrum-cephalosporin-resistant enterobacteriaceae in poultry meat in Switzerland: emergence of CMY-2- and VEB-6-possessing Proteus mirabilis. Antimicrobial agents and chemotherapy, 57(12), pp. 6406-6408. American Society for Microbiology 10.1128/AAC.01773-13

Peltola, Heikki; Leib, Stephen L. (2013). Performance of adjunctive therapy in bacterial meningitis depends on circumstances. Pediatric infectious disease journal, 32(12), pp. 1381-1382. Lippincott Williams & Wilkins 10.1097/INF.0000000000000066

Orasch, C.; Marchetti, O.; Garbino, J.; Schrenzel, J.; Zimmerli, Stefan; Mühlethaler, Konrad; Pfyffer, G.; Ruef, C.; Fehr, J.; Zbinden, R.; Calandra, T.; Bille, J.; Fungal Infection Network of Switzerland (FUNGINOS), the (2013). Candida species distribution and antifungal susceptibility testing according to European Committee on Antimicrobial Susceptibility Testing and new vs. old Clinical and Laboratory Standards Institute clinical breakpoints: a 6-year prospective candidaemia survey from the fungal infection network of Switzerland. Clinical microbiology and infection, 20(7), pp. 698-705. Blackwell Publishing 10.1111/1469-0691.12440

Tissot, Frederic; Lamoth, Frederic; Hauser, Philippe M.; Orasch, Christina; Flückiger, Ursula; Siegemund, Martin; Zimmerli, Stefan; Calandra, Thierry; Bille, Jacques; Eggimann, Philippe; Marchetti, Oscar (2013). β-Glucan Antigenemia Anticipates Diagnosis of Blood Culture–Negative Intraabdominal Candidiasis. American journal of respiratory and critical care medicine, 188(9), pp. 1100-1109. American Lung Association 10.1164/rccm.201211-2069OC

Lupo, Agnese; Papp-Wallace, Krisztina M.; Sendi, Parham; Bonomo, Robert A.; Endimiani, Andrea (2013). Non-phenotypic tests to detect and characterize antibiotic resistance mechanisms in Enterobacteriaceae. Diagnostic microbiology and infectious disease, 77(3), pp. 179-194. Elsevier 10.1016/j.diagmicrobio.2013.06.001

Tissot, Eveline; Winkelmann, Martina; Wildbolz, Samuel; Schaufelberger, Mireille (2013). Warum nicht ein Hausarztpraktikum in GB? PrimaryCare, 13(22), p. 404. EMH Editores Medicorum Helveticorum - Schweizerischer Ärzteverlag AG

Miedema, Karin G. E.; Winter, Rik H. L. J.; Ammann, Roland A.; Droz, Sara Christine; Spanjaard, Lodewijk; de Bont, Eveline S. J. M.; Kamps, Willem A.; van de Wetering, Marianne D.; Tissing, Wim J. E. (2013). Bacteria causing bacteremia in pediatric cancer patients presenting with febrile neutropenia – species distribution and susceptibility patterns. Supportive care in cancer, 21(9), pp. 2417-2426. Springer 10.1007/s00520-013-1797-4

Schüpbach, Jörg; Gebhardt, Martin D.; Scherrer, Alexandra U.; Bisset, Leslie R.; Niederhauser, Christoph; Regenass, Stephan; Yerly, Sabine; Aubert, Vincent; Suter, Franziska Marta; Pfister, Stefan; Marinetti, Gladys; Andreutti, Corinne; Klimkait, Thomas; Brandenberger, Marcel; Günthard, Huldrych F. (2013). Simple Estimation of Incident HIV Infection Rates in Notification Cohorts Based on Window Periods of Algorithms for Evaluation of Line-Immunoassay Result Patterns. PLoS ONE, 8(8), e71662. Public Library of Science 10.1371/journal.pone.0071662

Garzoni, Christian; Brugger, Silvio D.; Qi, W.; Wasmer Rueff, Sarah Patricia; Cusini, Alexia; Dumont, P.; Gorgievski, Meri; Mühlemann, Kathrin; Von Garnier, Christophe; Hilty, Markus (2013). Microbial communities in the respiratory tract of patients with interstitial lung disease. Thorax, 68(12), pp. 1150-1156. BMJ Publishing Group 10.1136/thoraxjnl-2012-202917

Coutinho, Leonam G; Grandgirard, Denis; Leib, Stephen L.; Agnez-Lima, Lucymara F (2013). Cerebrospinal-fluid cytokine and chemokine profile in patients with pneumococcal and meningococcal meningitis. BMC infectious diseases, 13(1), p. 326. BioMed Central 10.1186/1471-2334-13-326

Ammann, Roland A.; Bodmer, Nicole; Simon, Arne; Agyeman, Philipp; Leibundgut, Kurt; Schlapbach, Luregn J.; Niggli, Felix K. (2013). Serum Concentrations of Mannan-Binding Lectin (MBL) and MBL-Associated Serine Protease-2 and the Risk of Adverse Events in Pediatric Patients With Cancer and Fever in Neutropenia. Journal of the Pediatric Infectious Diseases Society, 2(2), pp. 155-161. Oxford University Press 10.1093/jpids/pit005

Perreten, Vincent; Endimiani, Andrea; Thomann, Andreas; Wipf, Juliette R. K.; Rossano, Alexandra; Bodmer, Michèle; Raemy, Andreas; Sannes-Lowery, Kristin A.; Ecker, David J.; Sampath, Rangarajan; Bonomo, Robert A. (2013). Evaluation of PCR electrospray-ionization mass spectrometry for rapid molecular diagnosis of bovine mastitis. Journal of dairy science, 96(6), pp. 3611-3620. American Dairy Science Association 10.3168/jds.2012-6124

Tinguely, Regula; Seiffert, Salome Nadja; Furrer, Hansjakob; Perreten, Vincent; Droz, Sara Christine; Endimiani, Andrea (2013). Emergence of extensively drug-resistant Haemophilus parainfluenzae in Switzerland. Antimicrobial agents and chemotherapy, 57(6), pp. 2867-2869. American Society for Microbiology 10.1128/AAC.00221-13

Kronenberg, Andreas; Hilty, M.; Endimiani, A.; Mühlemann, Kathrin (2013). Temporal trends of extended-spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in in- and outpatients in Switzerland, 2004 to 2011. Euro surveillance, 18(21), p. 20484. Institut de Veille Sanitaire

Jansen, Sandra; Podschun, Rainer; Leib, Stephen L.; Grötzinger, Joachim; Oestern, Stefanie; Michalek, Matthias; Pufe, Thomas; Brandenburg, Lars-Ove (2013). Expression and function of psoriasin (S100A7) and koebnerisin (S100A15) in the brain. Infection and immunity, 81(5), pp. 1788-1797. American Society for Microbiology 10.1128/IAI.01265-12

Anres, Philippe; Delaunay, Nathalie; Vial, Jérôme; Thormann, Wolfgang; Gareil, Pierre (2013). Influence of high-conductivity buffer composition on field-enhanced sample injection coupled to sweeping in CE. Electrophoresis, 34(3), pp. 353-362. Wiley-VCH 10.1002/elps.201200374

Comim, Clarissa M; Barichello, Tatiana; Grandgirard, Denis; Dal-Pizzol, Felipe; Quevedo, João; Leib, Stephen L. (2013). Caspase-3 mediates in part hippocampal apoptosis in sepsis. Molecular neurobiology, 47(1), pp. 394-398. Clifton, N.J.: Humana Press 10.1007/s12035-012-8354-x

Skiada, Anna; Lanternier, Fanny; Groll, Andreas H; Pagano, Livio; Zimmerli, Stefan; Herbrecht, Raoul; Lortholary, Olivier; Petrikkos, George L; European Conference on Infections in Leukemia, (2013). Diagnosis and treatment of mucormycosis in patients with hematological malignancies: guidelines from the 3rd European Conference on Infections in Leukemia (ECIL 3). Haematologica - the hematology journal, 98(4), pp. 492-504. Pavia: Ferrata-Storti Foundation 10.3324/haematol.2012.065110

Engel, Hansjürg; Gutiérrez-Fernández, Javier; Flückiger, Christine; Martínez-Ripoll, Martín; Mühlemann, Kathrin; Hermoso, Juan A; Hilty, Markus; Hathaway, Lucy Jane (2013). Heteroresistance to Fosfomycin Is Predominant in Streptococcus pneumoniae and Depends on the murA1 Gene. Antimicrobial agents and chemotherapy, 57(6), pp. 2801-8. Washington, D.C.: American Society for Microbiology 10.1128/AAC.00223-13

Plüss-Suard, C; Pannatier, A; Kronenberg, Andreas; Mühlemann, K; Zanetti, G (2013). Impact of antibiotic use on carbapenem resistance in Pseudomonas aeruginosa: is there a role for antibiotic diversity? Antimicrobial agents and chemotherapy, 57(4), pp. 1709-13. Washington, D.C.: American Society for Microbiology 10.1128/AAC.01348-12

Hilty, Markus; Sendi, Parham; Seiffert, Salome Nadja; Droz, Sara Christine; Perreten, Vincent; Hujer, Andrea M; Bonomo, Robert A; Mühlemann, Kathrin; Endimiani, Andrea (2013). Characterisation and clinical features of Enterobacter cloacae bloodstream infections occurring at a tertiary care university hospital in Switzerland: is cefepime adequate therapy? International journal of antimicrobial agents, 41(3), pp. 236-49. Amsterdam: Elsevier 10.1016/j.ijantimicag.2012.10.022

Spaniol, Violeta; Wyder, Stefan; Aebi, Christoph (2013). RNA-Seq-based analysis of the physiologic cold shock-induced changes in Moraxella catarrhalis gene expression. PLoS ONE, 8(7), e68298. Public Library of Science 10.1371/journal.pone.0068298

Seiffert, Salome Nadja; Hilty, Markus; Kronenberg, Andreas; Droz, Sara Christine; Perreten, Vincent; Endimiani, Andrea (2013). Extended-spectrum cephalosporin-resistant Escherichia coli in community, specialized outpatient clinic and hospital settings in Switzerland. Journal of antimicrobial chemotherapy, 68(10), pp. 2249-2254. Oxford University Press 10.1093/jac/dkt208

Seiffert, Salome Nadja; Hilty, Markus; Perreten, Vincent; Endimiani, Andrea (2013). Extended-spectrum cephalosporin-resistant Gram-negative organisms in livestock: an emerging problem for human health? Drug Resistance Updates, 16(1-2), pp. 22-45. Churchill Livingstone 10.1016/j.drup.2012.12.001

Rohrbach, Janine; Stickel, Felix; Schmid, Patrick; Thormann, Wolfgang; Kovari, Helen; Scherrer, Alexandra; Günthard, Huldrych F.; Vuichard, Danielle; Cavassini, Matthias; Ambrosioni, Juan; Bernasconi, Enos; Furrer, Hansjakob; Rauch, Andri; Swiss HIV Cohort Study, The (2013). Changes in biomarkers of liver disease during successful combination antiretroviral therapy in HIV/HCV-coinfected individuals. Antiviral therapy, 19(2), pp. 149-159. International Medical Press 10.3851/IMP2686

Uçkay, Ilker; Sax, Hugo; Gayet-Ageron, Angèle; Ruef, Christian; Mühlemann, Kathrin; Troillet, Nicolas; Petignat, Christiane; Bernasconi, Enos; Balmelli, Carlo; Widmer, Andreas; Boubaker, Karim; Pittet, Didier (2013). High proportion of healthcare-associated urinary tract infection in the absence of prior exposure to urinary catheter: a cross-sectional study. Antimicrobial Resistance and Infection Control, 2(1), p. 5. BioMed Central 10.1186/2047-2994-2-5

Monney, Thierry; Grandgirard, Denis; Leib, Stephen; Hemphill, Andrew (2013). Use of a Th1 Stimulator Adjuvant for Vaccination against Neospora caninum Infection in the Pregnant Mouse Model. Pathogens, 2(2), pp. 193-208. MDPI AG 10.3390/pathogens2020193

Eggimann, Gabriela; Buschor, Stefanie; Darbre, Tamis; Reymond, Jean-Louis (2013). Convergent synthesis and cellular uptake of multivalent cell penetrating peptides derived from Tat, Antp, pVEC, TP10 and SAP. Organic & biomolecular chemistry, 11(39), pp. 6717-6733. Royal Society of Chemistry 10.1039/c3ob41023d

Aeschlimann, André G.; Bachmann, Stefan; Cedraschi, Christine; Curatolo, Michele; Egloff, Niklaus; Keel, Peter J.; Thomas, Petra (2013). Fibromyalgie-Syndrom: neue Erkenntnisse zu Diagnostik und Therapie Teil 2: Praktisches Vorgehen bei Abklärung und Behandlung. Schweizerisches Medizin-Forum SMF / Swiss medical forum / Forum médical suisse FMS, 13(27-28), pp. 541-543. EMH Editores Medicorum Helveticorum

Zysset-Burri, Denise C.; Bellac, Caroline L; Leib, Stephen L.; Wittwer, Matthias (2013). Vitamin B6 reduces hippocampal apoptosis in experimental pneumococcal meningitis. BMC infectious diseases, 13, p. 393. BioMed Central 10.1186/1471-2334-13-393

Grandgirard, Denis; Gäumann, Rahel; Coulibaly, Boubacar; Dangy, Jean-Pierre; Sie, Ali; Junghanss, Thomas; Schudel, Hans; Pluschke, Gerd; Leib, Stephen L. (2013). The causative pathogen determines the inflammatory profile in cerebrospinal fluid and outcome in patients with bacterial meningitis. Mediators of inflammation, 2013, p. 312476. Hindawi Publishing Corp. 10.1155/2013/312476

Müller, Pie; Pflüger, Valentin; Wittwer, Matthias; Ziegler, Dominik; Chandre, Fabrice; Simard, Frédéric; Lengeler, Christian (2013). Identification of cryptic Anopheles mosquito species by molecular protein profiling. PLoS ONE, 8(2), e57486. Public Library of Science 10.1371/journal.pone.0057486

Xie, Gary; Ramirez, Maria S.; Marshall, Steven H.; Hujer, Kristine M.; Lo, Chien-Chi; Johnson, Shannon; Li, Po-E; Davenport, Karen; Endimiani, Andrea; Bonomo, Robert A.; Tolmasky, Marcelo E.; Chain, Patrick S. G. (2013). Genome Sequences of Two Klebsiella pneumoniae Isolates from Different Geographical Regions, Argentina (Strain JHCK1) and the United States (Strain VA360). Genome Announcements, 1(2), e00168-13. American Society for Microbiology

Hara, Gabriel Levy; Gould, Ian; Endimiani, Andrea; Pardo, Pilar Ramón; Daikos, George; Hsueh, Po-Ren; Mehtar, Shaheen; Petrikkos, George; Casellas, José María; Daciuk, Lucía; Paciel, Daniela; Novelli, Andrea; Saginur, Raphael; Pryluka, Daniel; Medina, Julio; Savio, Eduardo (2013). Detection, treatment, and prevention of carbapenemase-producing Enterobacteriaceae : Recommendations from an International Working Group. Journal of Chemotherapy, 25(3), pp. 129-140. Maney 10.1179/1973947812Y.0000000062

Lange, Christian M.; Miki, Daiki; Ochi, Hidenori; Nischalke, Hans-Dieter; Bojunga, Jörg; Bibert, Stéphanie; Morikawa, Kenichi; Gouttenoire, Jérôme; Cerny, Andreas; Dufour, Jean-François; Gorgievski, Meri; Heim, Markus H.; Malinverni, Raffaele; Müllhaupt, Beat; Negro, Francesco; Semela, David; Kutalik, Zoltan; Müller, Tobias; Spengler, Ulrich; Berg, Thomas; ... (2013). Genetic Analyses Reveal a Role for Vitamin D Insufficiency in HCV-Associated Hepatocellular Carcinoma Development. PLoS ONE, 8(5), e64053. Public Library of Science 10.1371/journal.pone.0064053

Gobet, Angélique; Boetius, Antje; Ramette, Alban Nicolas (2013). Ecological coherence of diversity patterns derived from classical fingerprinting and Next Generation Sequencing techniques. Environmental microbiology, 16(9), pp. 2672-2681. Wiley-Blackwell 10.1111/1462-2920.12308

Meyer, Stefanie; Wegener, Gunter; Lloyd, Karen G.; Teske, Andreas; Boetius, Antje; Ramette, Alban Nicolas (2013). Microbial habitat connectivity across spatial scales and hydrothermal temperature gradients at Guaymas Basin. Frontiers in Microbiology, 4(207) Frontiers 10.3389/fmicb.2013.00207

Ruff, S. Emil; Arnds, Julia; Knittel, Katrin; Amann, Rudolf; Wegener, Gunter; Ramette, Alban Nicolas; Boetius, Antje (2013). Microbial Communities of Deep-Sea Methane Seeps at Hikurangi Continental Margin (New Zealand). PLoS ONE, 8(9), e72627. Public Library of Science 10.1371/journal.pone.0072627

Jacob, Marianne; Soltwedel, Thomas; Boetius, Antje; Ramette, Alban Nicolas (2013). Biogeography of Deep-Sea Benthic Bacteria at Regional Scale (LTER HAUSGARTEN, Fram Strait, Arctic). PLoS ONE, 8(9), e72779. Public Library of Science 10.1371/journal.pone.0072779

Schöttner, Sandra; Hoffmann, Friederike; Cárdenas, Paco; Rapp, Hans Tore; Boetius, Antje; Ramette, Alban Nicolas (2013). Relationships between Host Phylogeny, Host Type and Bacterial Community Diversity in Cold-Water Coral Reef Sponges. PLoS ONE, 8(2), e55505. Public Library of Science 10.1371/journal.pone.0055505

2012

Zysset-Burri, Denise Corinne; Gottstein, Bruno; Zumkehr, Béatrice; Hemphill, Andrew; Schürch, Nadia; Wittwer, Matthias; Müller, Norbert (2012). Development of a high- versus low-pathogenicity model of the free-living amoeba Naegleria fowleri. Microbiology, 158(Pt 10), pp. 2652-2660. Society for General Microbiology 10.1099/mic.0.059790-0

Bochud, Pierre-Yves; Bibert, Stéphanie; Kutalik, Zoltán; Patin, Etienne; Guergnon, Julien; Nalpas, Bertrand; Goossens, Nicolas; Kuske, Lorenz; Müllhaupt, Beat; Gerlach, Tillman; Heim, Markus H; Moradpour, Darius; Cerny, Andreas; Malinverni, Raffaele; Regenass, Stephan; Dollenmaier, Guenter; Hirsch, Hans; Martinetti, Gladys; Gorgiewski, Meri; Bourlière, Marc; ... (2012). IL28B alleles associated with poor hepatitis C virus (HCV) clearance protect against inflammation and fibrosis in patients infected with non-1 HCV genotypes. Hepatology, 55(2), pp. 384-94. Hoboken, N.J.: Wiley Interscience 10.1002/hep.24678

Jegerlehner, Sabrina; Vogel, Daniel; Tappeiner, Christoph; Leib, Stephen (2012). What vision loss might bring to light. Praxis - schweizerische Rundschau für Medizin, 101(6), pp. 419-423. Bern: Huber 10.1024/1661-8157/a000869

Mühlethaler, K; Bögli-Stuber, K; Wasmer, S; von Garnier, C; Dumont, P; Rauch, A; Mühlemann, K; Garzoni, C (2012). Quantitative PCR to diagnose Pneumocystis pneumonia in immunocompromised non-HIV patients. European respiratory journal, 39(4), pp. 971-8. Sheffield, UK: European Respiratory Society 10.1183/09031936.00095811

Zürcher, Samuel; Mooser, Catherine; Lüthi, Alexander Urs; Mühlemann, Kathrin; Barbani, Maria Teresa; Mohacsi, Paul; Garzoni, Christian; Gorgievski-Hrisoho, Meri; Schaller, André; Flatz, Lukas (2012). Sensitive and rapid detection of ganciclovir resistance by PCR based MALDI-TOF analysis. Journal of clinical virology, 54(4), pp. 359-63. Amsterdam: Elsevier 10.1016/j.jcv.2012.04.019

Hilty, Markus; Qi, Weihong; Brugger, Silvio D; Frei, Laurence; Agyeman, Philipp; Frey, Pascal M; Aebi, Suzanne; Mühlemann, Kathrin (2012). Nasopharyngeal microbiota in infants with acute otitis media. Journal of infectious diseases, 205(7), pp. 1048-55. Cary, N.C.: Oxford University Press 10.1093/infdis/jis024

Birrenbach, Tanja; Bertschy, Sonja; Aebersold, Franziska; Mueller, Nicolas J; Achermann, Yvonne; Muehlethaler, Konrad; Zimmerli, Stefan (2012). Emergence of Blastoschizomyces capitatus yeast infections, Central Europe. Emerging infectious diseases, 18(1), pp. 98-101. Atlanta, Ga.: U.S. National Center for Infectious Diseases 10.3201/eid1801.111192

Tveden-Nyborg, Pernille; Vogt, Lucile; Schjoldager, Janne G.; Jeannet, Natalie; Hasselholt, Stine; Paidi, Maya D.; Lykkesfeldt, Jens; Christen, Stephan (2012). Maternal vitamin C deficiency during pregnancy persistently impairs hippocampal neurogenesis in offspring of guinea pigs. PLoS ONE, 7(10), e48488. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0048488

Autheman, Delphine; Sheldon, R Ann; Chaudhuri, Nondini; von Arx, Sebastian; Siegenthaler, Corinne; Ferriero, Donna M; Christen, Stephan (2012). Glutathione peroxidase overexpression causes aberrant ERK activation in neonatal mouse cortex after hypoxic preconditioning. Pediatric research, 72(6), pp. 568-75. New York, N.Y.: Nature Publishing Group 10.1038/pr.2012.124

Mitchell, Andrew J.; Yau, Belinda; McQuillan, James A; Ball, Helen J.; Too, Lay Khoon; Abtin, Arby; Hertzog, Paul; Leib, Stephen L.; Jones, Cheryl A.; Gerega, Sebastien K.; Weninger, Wolfgang; Hunt, Nicholas H. (2012). Inflammasome-dependent IFN-γ drives pathogenesis in Streptococcus pneumoniae meningitis. Journal of immunology, 189(10), pp. 4970-80. Bethesda, Md.: American Association of Immunologists 10.4049/jimmunol.1201687

Maffioli, Carola; Grandgirard, Denis; Engler, Olivier; Leib, Stephen L. (2012). SiRNA inhibits replication of Langat virus, a member of the tick-borne encephalitis virus complex in organotypic rat brain slices. PLoS ONE, 7(9), e44703. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0044703

Monney, Thierry; Debache, Karim; Grandgirard, Denis; Leib, Stephen L.; Hemphill, Andrew (2012). Vaccination with the recombinant chimeric antigen recNcMIC3-1-R induces a non-protective Th2-type immune response in the pregnant mouse model for N. caninum infection. Vaccine, 30(46), pp. 6588-94. Amsterdam: Elsevier 10.1016/j.vaccine.2012.08.024

Guldimann, Claudia; Lejeune, Beatrice; Hofer, Sandra; Leib, Stephen L.; Frey, Joachim; Zurbriggen, Andreas; Seuberlich, Torsten; Oevermann, Anna (2012). Ruminant organotypic brain-slice cultures as a model for the investigation of CNS listeriosis. International journal of experimental pathology, 93(4), pp. 259-268. Oxford: Blackwell Science 10.1111/j.1365-2613.2012.00821.x

Grandgirard, Denis; Burri, Melchior; Agyeman, Philipp; Leib, Stephen (2012). Adjunctive daptomycin attenuates brain damage and hearing loss more efficiently than rifampin in infant rat pneumococcal meningitis. Antimicrobial agents and chemotherapy, 56(8), pp. 4289-95. Washington, D.C.: American Society for Microbiology 10.1128/AAC.00674-12

Hofer, Sandra; Magloire, Vincent; Streit, Jürg; Leib, Stephen L. (2012). Grafted neuronal precursor cells differentiate and integrate in injured hippocampus in experimental pneumococcal meningitis. Stem cells, 30(6), pp. 1206-15. Durham: AlphaMed Press

Wandeler, Gilles; Gastmeier, P; Mühlemann, Kathrin (2012). Infektionskrankheiten. In: Egger, Matthias; Razum, Oliver (eds.) Public Health: Sozial- und Präventivmedizin kompakt (pp. 275-313). Berlin: De Gruyter 10.1515/9783110255416.275

Hilty, Markus; Betsch, Belinda Y; Bögli-Stuber, Katja; Heiniger, Nadja; Stadler, Markus; Küffer, Marianne; Kronenberg, Andreas; Rohrer, Christine; Aebi, Suzanne; Endimiani, Andrea; Droz, Sara; Mühlemann, Kathrin (2012). Transmission dynamics of extended-spectrum β-lactamase-producing Enterobacteriaceae in the tertiary care hospital and the household setting. Clinical infectious diseases, 55(7), pp. 967-75. Cary, N.C.: Oxford University Press 10.1093/cid/cis581

Endimiani, Andrea; Hilty, Markus; Perreten, Vincent (2012). CMY-2-producing Escherichia coli in the nose of pigs. Antimicrobial agents and chemotherapy, 56(8), pp. 4556-7. Washington, D.C.: American Society for Microbiology 10.1128/AAC.00389-12

Endimiani, Andrea; Rossano, Alexandra; Kunz, Daniel; Overesch, Gudrun; Perreten, Vincent (2012). First countrywide survey of third-generation cephalosporin-resistant Escherichia coli from broilers, swine, and cattle in Switzerland. Diagnostic microbiology and infectious disease, 73(1), pp. 31-8. New York, N.Y.: Elsevier 10.1016/j.diagmicrobio.2012.01.004

Endimiani, Andrea; Bertschy, Isabelle; Perreten, Vincent (2012). Escherichia coli producing CMY-2 β-lactamase in bovine mastitis milk. Journal of food protection, 75(1), pp. 137-8. Des Moines, Iowa: International Association for Food Protection 10.4315/0362-028X.JFP-11-320

Blaich, Annette; de Roche, Mirjam; Kaufmann, Beat A; Suter-Riniker, Franziska; Rosin, Christiane; Frei, Reno; Weisser, Maja (2012). Endocarditis due to a stealthy bug. International journal of cardiology, 160(3), e54-5. Amsterdam: Elsevier 10.1016/j.ijcard.2012.03.029

Schüpbach, Jörg; Bisset, Leslie R.; Gebhardt, Martin D.; Regenass, Stephan; Bürgisser, Philippe; Gorgievski, Meri; Klimkait, Thomas; Andreutti, Corinne; Martinetti, Gladys; Niederhauser, Christoph; Yerly, Sabine; Pfister, Stefan; Schultze, Detlev; Brandenberger, Marcel; Schöni-Affolter, Franziska; Scherrer, Alexandra U.; Günthard, Huldrych F.; Swiss HIV Cohort Study, (2012). Diagnostic performance of line-immunoassay based algorithms for incident HIV-1 infection. BMC infectious diseases, 12, p. 88. London: BioMed Central 10.1186/1471-2334-12-88

Kröll, Dino; Candinas, Daniel; Sendi, Parham (2012). The Wisdom tooth of Abdominal Lemierre's Syndrome (Unpublished). In: SGIM 2012.

Pop Ristova, P.; Wenzhöfer, F.; Ramette, Alban Nicolas; Zabel, M.; Fischer, D.; Kasten, S.; Boetius, A. (2012). Bacterial diversity and biogeochemistry of different chemosynthetic habitats of the REGAB cold seep (West African margin, 3160 m water depth). Biogeosciences Discussions, 9(7), pp. 8337-8385. Copernicus 10.5194/bgd-9-8337-2012

Amend, Anthony S.; Oliver, Tom A.; Amaral-Zettler, Linda A.; Boetius, Antje; Fuhrman, Jed A.; Horner-Devine, M. Claire; Huse, Susan M.; Welch, David B. Mark; Martiny, Adam C.; Ramette, Alban Nicolas; Zinger, Lucie; Sogin, Mitchell L.; Martiny, Jennifer B. H.; Lambshead, John (2012). Macroecological patterns of marine bacteria on a global scale. Journal of Biogeography, 40(4), pp. 800-811. Blackwell Scientific Publications 10.1111/jbi.12034

Pop Ristova, P.; Wenzhöfer, F.; Ramette, Alban Nicolas; Zabel, M.; Fischer, D.; Kasten, S.; Boetius, A. (2012). Bacterial diversity and biogeochemistry of different chemosynthetic habitats of the REGAB cold seep (West African margin, 3160 m water depth). Biogeosciences, 9(12), pp. 5031-5048. Copernicus Publications 10.5194/bg-9-5031-2012

Sawall, Yvonne; Richter, Claudio; Ramette, Alban Nicolas (2012). Effects of Eutrophication, Seasonality and Macrofouling on the Diversity of Bacterial Biofilms in Equatorial Coral Reefs. PLoS ONE, 7(7), e39951. Public Library of Science 10.1371/journal.pone.0039951

Gobet, Angélique; Böer, Simone I; Huse, Susan M; van Beusekom, Justus E E; Quince, Christopher; Sogin, Mitchell L; Boetius, Antje; Ramette, Alban Nicolas (2012). Diversity and dynamics of rare and of resident bacterial populations in coastal sands. The ISME journal, 6(3), pp. 542-553. Nature Publishing Group 10.1038/ismej.2011.132

Kleindienst, Sara; Ramette, Alban Nicolas; Amann, Rudolf; Knittel, Katrin (2012). Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments. Environmental microbiology, 14(10), pp. 2689-2710. Wiley-Blackwell 10.1111/j.1462-2920.2012.02832.x

Grünke, S.; Lichtschlag, A.; de Beer, D.; Felden, J.; Salman, V.; Ramette, Alban Nicolas; Schulz-Vogt, H. N.; Boetius, A. (2012). Mats of psychrophilic thiotrophic bacteria associated with cold seeps of the Barents Sea. Biogeosciences, 9(8), pp. 2947-2960. Copernicus Publications 10.5194/bg-9-2947-2012

Ionescu, Danny; Siebert, Christian; Polerecky, Lubos; Munwes, Yaniv Y.; Lott, Christian; Häusler, Stefan; Bižić-Ionescu, Mina; Quast, Christian; Peplies, Jörg; Glöckner, Frank Oliver; Ramette, Alban Nicolas; Rödiger, Tino; Dittmar, Thorsten; Oren, Aharon; Geyer, Stefan; Stärk, Hans-Joachim; Sauter, Martin; Licha, Tobias; Laronne, Jonathan B.; de Beer, Dirk; ... (2012). Microbial and Chemical Characterization of Underwater Fresh Water Springs in the Dead Sea. PLoS ONE, 7(6), e38319. Public Library of Science 10.1371/journal.pone.0038319

Abed, Raeid M.M.; Ramette, Alban Nicolas; Hübner, Vera; Deckker, Patrick; Beer, Dirk (2012). Microbial diversity of eolian dust sources from saline lake sediments and biological soil crusts in arid Southern Australia. FEMS Microbiology Ecology, 80(2), pp. 294-304. Wiley 10.1111/j.1574-6941.2011.01289.x

Bauermeister, Jan; Ramette, Alban Nicolas; Dattagupta, Sharmishtha (2012). Repeatedly Evolved Host-Specific Ectosymbioses between Sulfur-Oxidizing Bacteria and Amphipods Living in a Cave Ecosystem. PLoS ONE, 7(11), e50254. Public Library of Science 10.1371/journal.pone.0050254

Schöttner, Sandra; Wild, Christian; Hoffmann, Friederike; Boetius, Antje; Ramette, Alban Nicolas (2012). Spatial Scales of Bacterial Diversity in Cold-Water Coral Reef Ecosystems. PLoS ONE, 7(3), e32093. Public Library of Science 10.1371/journal.pone.0032093

Bienhold, Christina; Boetius, Antje; Ramette, Alban Nicolas (2012). The energy–diversity relationship of complex bacterial communities in Arctic deep-sea sediments. The ISME journal, 6(4), pp. 724-732. Nature Publishing Group 10.1038/ismej.2011.140

2011

Pauli, Urs; Kündig, Martin; Haldemann, Fritz; Summermatter, Kathrin (2011). Installation of BSL-3 Laboratories and ABSL-3 Animal Experimentation Rooms in a Preexisting BSL-3Ag Facility: Design, Implementation, Validation, Time Requirements, and Costs. Applied biosafety, 16(2), pp. 103-111. Mary Ann Liebert 10.1177/153567601101600206

Lüer, Sonja; Troller, Rolf; Jetter, Marion; Spaniol, Violeta; Aebi, Christoph (2011). Topical curcumin can inhibit deleterious effects of upper respiratory tract bacteria on human oropharyngeal cells in vitro: potential role for patients with cancer therapy induced mucositis? Supportive care in cancer, 19(6), pp. 799-806. Berlin: Springer-Verlag 10.1007/s00520-010-0894-x

Ortmann, Jana; Veit, Martha; Zingg, Sandra; Di Santo, Stefano; Traupe, Tobias; Yang, Zijiang; Völzmann, Jan; Dubey, Raghvendra K; Christen, Stephan; Baumgartner, Iris (2011). Estrogen receptor- but not - or GPER inhibits high glucose-induced human VSMC proliferation: potential role of ROS and ERK. Journal of clinical endocrinology and metabolism, 96(1), pp. 220-8. Chevy Chase, Md.: Endocrine Society 10.1210/jc.2010-0943

Sury, Matthias D.; Vorlet-Fawer, Lorianne; Agarinis, Claudia; Yousefi, Shida; Grandgirard, Denis; Leib, Stephen L.; Christen, Stephan (2011). Restoration of Akt activity by the bisperoxovanadium compound bpV(pic) attenuates hippocampal apoptosis in experimental neonatal pneumococcal meningitis. Neurobiology of disease, 41(1), pp. 201-208. Amsterdam: Elsevier 10.1016/j.nbd.2010.09.007

Posthaus, H; Bodmer, T; Alves, L; Oevermann, A; Schiller, I; Rhodes, S G; Zimmerli, S (2011). Accidental infection of veterinary personnel with Mycobacterium tuberculosis at necropsy: a case study. Veterinary microbiology, 149(3-4), pp. 374-80. Amsterdam: Elsevier 10.1016/j.vetmic.2010.11.027

Macheras, Edouard; Roux, Anne-Laure; Bastian, Sylvaine; Leão, Sylvia Cardoso; Palaci, Moises; Sivadon-Tardy, Valérie; Gutierrez, Cristina; Richter, Elvira; Rüsch-Gerdes, Sabine; Pfyffer, Gaby; Bodmer, Thomas; Cambau, Emmanuelle; Gaillard, Jean-Louis; Heym, Beate (2011). Multilocus sequence analysis and rpoB sequencing of Mycobacterium abscessus (sensu lato) strains. Journal of clinical microbiology, 49(2), pp. 491-9. Washington, D.C.: American Society for Microbiology 10.1128/JCM.01274-10

Achermann, R; Suter, K; Kronenberg, Andreas Oskar; Gyger, P; Mühlemann, K; Zimmerli, W; Bucher, H C (2011). Antibiotic use in adult outpatients in Switzerland in relation to regions, seasonality and point of care tests. Clinical microbiology and infection, 17(6), pp. 855-861. Oxford: Blackwell Publishing 10.1111/j.1469-0691.2010.03348.x

Sluijs, Koenraad F van der; Obregon, Carolina; Geiser, Thomas K; Mühlemann, Kathrin; Nicod, Laurent P (2011). Monocyte differentiation toward regulatory dendritic cells is not affected by respiratory syncytial virus-induced inflammatory mediators. American journal of respiratory cell and molecular biology, 44(5), pp. 655-64. New York, N.Y.: American Lung Association 10.1165/rcmb.2010-0136OC

Schüpbach, Jörg; Bisset, Leslie R; Regenass, Stephan; Bürgisser, Philippe; Gorgievski, Meri; Steffen, Ingrid; Andreutti, Corinne; Martinetti, Gladys; Shah, Cyril; Yerly, Sabine; Klimkait, Thomas; Gebhardt, Martin; Schöni-Affolter, Franziska; Rickenbach, Martin; Keiser, O; Swiss HIV Cohort Study, (2011). High specificity of line-immunoassay based algorithms for recent HIV-1 infection independent of viral subtype and stage of disease. BMC infectious diseases, 11, p. 254. London: BioMed Central 10.1186/1471-2334-11-254

Kurmann, Anita; Peter, Matthias; Tschan, Franziska; Mühlemann, Kathrin; Candinas, Daniel; Beldi, Guido (2011). Adverse effect of noise in the operating theatre on surgical-site infection. British journal of surgery, 98(7), pp. 1021-1025. Bristol, UK: John Wright & Sons 10.1002/bjs.7496

Schlapbach, Luregn J.; Frey, Stefanie; Bigler, Susanna; Manh-Nhi, Chiem; Aebi, Christoph; Nelle, Mathias; Nuoffer, Jean-Marc (2011). Copeptin concentration in cord blood in infants with early-onset sepsis, chorioamnionitis and perinatal asphyxia. BMC pediatrics, 11, p. 38. London: BioMed Central 10.1186/1471-2431-11-38

Papp-Wallace, Krisztina M; Endimiani, Andrea; Taracila, Magdalena A; Bonomo, Robert A (2011). Carbapenems: past, present, and future. Antimicrobial agents and chemotherapy, 55(11), pp. 4943-60. Washington, D.C.: American Society for Microbiology 10.1128/AAC.00296-11

Woehrl, Bianca; Klein, Matthias; Grandgirard, Denis; Koedel, Uwe; Leib, Stephen (2011). Bacterial meningitis: current therapy and possible future treatment options. Expert review of anti-infective therapy, 9(11), pp. 1053-1065. London: Expert Reviews 10.1586/ERI.11.129

Hofer, Sandra; Grandgirard, Denis; Burri, Denise; Fröhlich, Tanja K.; Leib, Stephen L. (2011). Bacterial meningitis impairs hippocampal neurogenesis. Journal of neuropathology and experimental neurology, 70(10), pp. 890-899. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/NEN.0b013e3182303f31

Monney, Thierry; Rütti, David; Schorer, Michelle; Debache, Karim; Grandgirard, Denis; Leib, Stephen L.; Hemphill, Andrew (2011). RecNcMIC3-1-R is a microneme- and rhoptry-based chimeric antigen that protects against acute neosporosis and limits cerebral parasite load in the mouse model for Neospora caninum infection. Vaccine, 29(40), pp. 6967-6975. Amsterdam: Elsevier 10.1016/j.vaccine.2011.07.038

da Silva, Thayse Azevedo; Fontes, Fabrícia Lima; Coutinho, Leonam Gomes; de Souza, Fladjule Rejane Soares; de Melo, Julliane Tamara Araújo; de Souto, Janeusa Trindade; Leib, Stephen L.; Agnez-Lima, Lucymara Fassarella (2011). SNPs in DNA repair genes associated to meningitis and host immune response. Mutation research - fundamental and molecular mechanisms of mutagenesis, 713(1-2), pp. 39-47. Amsterdam: Elsevier 10.1016/j.mrfmmm.2011.05.012

de Souza, Fladjule Rejane Soares; Fontes, Fabrícia Lima; da Silva, Thayse Azevedo; Coutinho, Leonam Gomes; Leib, Stephen L.; Agnez-Lima, Lucymara Fassarella (2011). Association of kynurenine aminotransferase II gene C401T polymorphism with immune response in patients with meningitis. BMC medical genetics, 12(51), p. 51. London: BioMed Central 10.1186/1471-2350-12-51

Blaser, Cornelia; Wittwer, Matthias; Grandgirard, Denis; Leib, Stephen L. (2011). Adjunctive dexamethasone affects the expression of genes related to inflammation, neurogenesis and apoptosis in infant rat pneumococcal meningitis. PLoS ONE, 6(3), e17840. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0017840

Braun, Benedikt J.; Slowik, Alexander; Leib, Stephen L.; Lucius, Ralph; Varoga, Deike; Wruck, Christoph J.; Jansen, Sandra; Podschun, Rainer; Pufe, Thomas; Brandenburg, Lars-Ove (2011). The formyl peptide receptor like-1 and scavenger receptor MARCO are involved in glial cell activation in bacterial meningitis. Journal of neuroinflammation, 8(1), p. 11. London: BioMed Central 10.1186/1742-2094-8-11

Margos, M.C.; Grandgirard, Denis; Leib, Stephen; Gottstein, Bruno (2011). In vitro induction of lymph node cell proliferation by mouse bone marrow dendritic cells following stimulation with different Echinococcus multilocularis antigens. Journal of helminthology, 85(2), pp. 128-137. Cambridge: Cambridge University Press 10.1017/S0022149X10000878

Casanova, Carlo; Iselin, Lukas; von Steiger, Niklaus; Droz, Sara; Sendi, Parham (2011). Staphylococcus hyicus bacteremia in a farmer. Journal of clinical microbiology, 49(12), pp. 4377-8. Washington, D.C.: American Society for Microbiology 10.1128/JCM.05645-11

Kronenberg, Andreas; Koenig, S; Droz, S; Mühlemann, K (2011). Active surveillance of antibiotic resistance prevalence in urinary tract and skin infections in the outpatient setting. Clinical microbiology and infection, 17(12), pp. 1845-51. Oxford: Blackwell Publishing 10.1111/j.1469-0691.2011.03519.x

Silva, W A; Pinheiro, A M; Jahns, B; Bögli-Stuber, K; Droz, S; Zimmerli, S (2011). Breast abscess due to Actinomyces europaeus. Infection, 39(3), pp. 255-8. Heidelberg: Springer-Verlag 10.1007/s15010-011-0119-3

Babouee, B; Widmer, A F; Dubuis, O; Ciardo, D; Droz, S; Betsch, B Y; Garzoni, C; Führer, U; Battegay, M; Frei, R; Goldenberger, D (2011). Emergence of four cases of KPC-2 and KPC-3-carrying Klebsiella pneumoniae introduced to Switzerland, 2009-10. Euro surveillance, 16(11) Saint-Maurice: Institut de Veille Sanitaire

Spaniol, Violeta; Troller, Rolf; Schaller, André; Aebi, Christoph (2011). Physiologic cold shock of Moraxella catarrhalis affects the expression of genes involved in the iron acquisition, serum resistance and immune evasion. BMC microbiology, 11, p. 182. London: BioMed Central 10.1186/1471-2180-11-182

Sallenbach, Seraina; Thiel, Steffen; Aebi, Christoph; Otth, Margrith; Bigler, Susanna; Jensenius, Jens C; Schlapbach, Luregn J; Ammann, Roland A (2011). Serum concentrations of lectin-pathway components in healthy neonates, children and adults: mannan-binding lectin (MBL), M-, L-, and H-ficolin, and MBL-associated serine protease-2 (MASP-2). Pediatric allergy and immunology, 22(4), pp. 424-30. Oxford: Wiley-Blackwell 10.1111/j.1399-3038.2010.01104.x

Sadeghi, Christine D; Aebi, Christoph; Gorgievski-Hrisoho, Meri; Mühlemann, Kathrin; Barbani, Maria Teresa (2011). Twelve years' detection of respiratory viruses by immunofluorescence in hospitalised children: impact of the introduction of a new respiratory picornavirus assay. BMC infectious diseases, 11, p. 41. London: BioMed Central 10.1186/1471-2334-11-41

Plüss-Suard, C; Pannatier, A; Kronenberg, Andreas; Mühlemann, K; Zanetti, G (2011). Hospital antibiotic consumption in Switzerland: comparison of a multicultural country with Europe. Journal of hospital infection, 79(2), pp. 166-71. Kidlington, UK: Elsevier 10.1016/j.jhin.2011.05.028

Gäumann, Rahel; Růžek, Daniel; Mühlemann, Kathrin; Strasser, Marc; Beuret, Christian M (2011). Phylogenetic and virulence analysis of tick-borne encephalitis virus field isolates from Switzerland. Journal of medical virology, 83(5), pp. 853-63. Hoboken, N.J.: Wiley-Liss 10.1002/jmv.21993

Sax, Hugo; Uçkay, Ilker; Balmelli, Carlo; Bernasconi, Enos; Boubaker, Karim; Mühlemann, Kathrin; Ruef, Christian; Troillet, Nicolas; Widmer, Andreas; Zanetti, Giorgio; Pittet, Didier (2011). Overall burden of healthcare-associated infections among surgical patients. Results of a national study. Annals of surgery, 253(2), pp. 365-70. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/SLA.0b013e318202fda9

Kostadinov, Ivaylo; Kottmann, Renzo; Ramette, Alban Nicolas; Waldmann, Jost; Buttigieg, Pier Luigi; Glöckner, Frank (2011). Quantifying the effect of environment stability on the transcription factor repertoire of marine microbes. Microbial Informatics and Experimentation, 1(1), p. 9. BioMed Central 10.1186/2042-5783-1-9

Schöttner, Sandra; Pfitzner, Barbara; Grünke, Stefanie; Rasheed, Mohammed; Wild, Christian; Ramette, Alban Nicolas (2011). Drivers of bacterial diversity dynamics in permeable carbonate and silicate coral reef sands from the Red Sea. Environmental microbiology, 13(7), pp. 1815-1826. Wiley-Blackwell 10.1111/j.1462-2920.2011.02494.x

Rossel, Pamela E.; Elvert, Marcus; Ramette, Alban Nicolas; Boetius, Antje; Hinrichs, Kai-Uwe (2011). Factors controlling the distribution of anaerobic methanotrophic communities in marine environments: Evidence from intact polar membrane lipids. Geochimica et cosmochimica acta, 75(1), pp. 164-184. Elsevier Science 10.1016/j.gca.2010.09.031

Zinger, Lucie; Amaral-Zettler, Linda A.; Fuhrman, Jed A.; Horner-Devine, M. Claire; Huse, Susan M.; Welch, David B. Mark; Martiny, Jennifer B. H.; Sogin, Mitchell; Boetius, Antje; Ramette, Alban Nicolas (2011). Global Patterns of Bacterial Beta-Diversity in Seafloor and Seawater Ecosystems. PLoS ONE, 6(9), e24570. Public Library of Science 10.1371/journal.pone.0024570

Bru, D; Ramette, Alban Nicolas; Saby, N P A; Dequiedt, S; Ranjard, L; Jolivet, C; Arrouays, D; Philippot, L (2011). Determinants of the distribution of nitrogen-cycling microbial communities at the landscape scale. The ISME journal, 5(3), pp. 532-542. Nature Publishing Group 10.1038/ismej.2010.130

Ramette, Alban Nicolas; Frapolli, Michele; Saux, Marion Fischer-Le; Gruffaz, C.; Meyer, Jean-Marie; Défago, Geneviève; Sutra, Laurent; Moënne-Loccoz, Yvan (2011). Pseudomonas protegens sp. nov., widespread plant-protecting bacteria producing the biocontrol compounds 2,4-diacetylphloroglucinol and pyoluteorin. Systematic and applied microbiology, 34(3), pp. 180-188. Elsevier 10.1016/j.syapm.2010.10.005

2010

Schindera, Christina; Kraemer, Ann Lea; Regamey, Nicolas; Aebi, Christoph; Gorgievski-Hrisoho, Meri; Barbani, Maria Teresa (2010). Immunofluorescence versus xTAG multiplex PCR for the detection of respiratory picornavirus infections in children. Journal of clinical virology, 48(3), pp. 223-225. Amsterdam: Elsevier 10.1016/j.jcv.2010.04.005

Bigi, S; Aebi, C; Nauer, C; Bigler, S; Steinlin, M (2010). Acute transverse myelitis in Lyme neuroborreliosis. Infection, 38(5), pp. 413-416. Heidelberg: Springer-Medizin-Verlag 10.1007/s15010-010-0028-x

Gottstein, Bruno; Wittwer, Matthias; Schild, Marc; Merli, Michael; Leib, Stephen L.; Müller, Norbert; Müller, Joachim; Jaggi, Rolf (2010). Hepatic gene expression profile in mice perorally infected with Echinococcus multilocularis eggs. PLoS ONE, 5(4), e9779. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0009779

Tappeiner, Christoph; Schürch, Kaspar Werner; Goldblum, David; Zimmerli, Stefan; Fleischhauer, Johannes M.C.; Früh Epstein, Beatrice (2010). Combined meropenem and linezolid as a systemic treatment for postoperative endophthalmitis. Klinische Monatsblätter für Augenheilkunde, 227(4), pp. 257-61. Stuttgart: Ferdinand Enke Verlag 10.1055/s-0029-1245219

Berthod, D; Mühlemann, K; Oestmann, A (2010). [Right-sided lower abdominal pain and diarrhea of a young diabetic woman]. Praxis - schweizerische Rundschau für Medizin, 99(12), pp. 733-5. Bern: Huber

Bellac, Caroline L.; Coimbra, Roney S.; Christen, Stephan; Leib, Stephen L. (2010). Inhibition of the kynurenine-NAD+ pathway leads to energy failure and exacerbates apoptosis in pneumococcal meningitis. Journal of neuropathology and experimental neurology, 69(11), pp. 1096-1104. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/NEN.0b013e3181f7e7e9

Theurillat, Regula; Zimmerli, Stefan; Thormann, Wolfgang (2010). Determination of voriconazole in human serum and plasma by micellar electrokinetic chromatography. Journal of pharmaceutical and biomedical analysis, 53(5), pp. 1313-8. Oxford: Pergamon Press 10.1016/j.jpba.2010.05.015

Jetter, Marion; Spaniol, Violeta; Troller, Rolf; Aebi, Christoph (2010). Down-regulation of porin M35 in Moraxella catarrhalis by aminopenicillins and environmental factors and its potential contribution to the mechanism of resistance to aminopenicillins. Journal of antimicrobial chemotherapy, 65(10), pp. 2089-96. Oxford: Oxford University Press 10.1093/jac/dkq312

Grandgirard, Denis; Leib, Stephen L. (2010). Meningitis in neonates: bench to bedside. Clinics in perinatology, 37(3), pp. 655-676. New York, N.Y.: Elsevier 10.1016/j.clp.2010.05.004

Wittwer, Matthias; Grandgirard, Denis; Rohrbach, Janine; Leib, Stephen L. (2010). Tracking the transcriptional host response from the acute to the regenerative phase of experimental pneumococcal meningitis. BMC infectious diseases, 10(176), p. 176. London: BioMed Central 10.1186/1471-2334-10-176

Blaser, Cornelia; Klein, Matthias; Grandgirard, Denis; Wittwer, Matthias; Peltola, Heikki; Weigand, Michael; Koedel, Uwe; Leib, Stephen L. (2010). Adjuvant glycerol is not beneficial in experimental pneumococcal meningitis. BMC infectious diseases, 10(84), p. 84. London: BioMed Central 10.1186/1471-2334-10-84

Sellner, Johann; Täuber, Martin G.; Leib, Stephen L. (2010). Pathogenesis and pathophysiology of bacterial CNS infections. Handbook of clinical neurology, 96, pp. 1-16. Amsterdam: Elsevier 10.1016/S0072-9752(09)96001-8

Grandgirard, Denis; Oberson, Kevin; Bühlmann, Angela; Gäumann, Rahel; Leib, Stephen L. (2010). Attenuation of cerebrospinal fluid inflammation by the nonbacteriolytic antibiotic daptomycin versus that by ceftriaxone in experimental pneumococcal meningitis. Antimicrobial agents and chemotherapy, 54(3), pp. 1323-1326. Washington, D.C.: American Society for Microbiology 10.1128/AAC.00812-09

Østergaard, Christian; Leib, Stephen L.; Rowland, Ian; Brandt, Christian T. (2010). Bacteremia causes hippocampal apoptosis in experimental pneumococcal meningitis. BMC infectious diseases, 10(1), p. 1. London: BioMed Central 10.1186/1471-2334-10-1

Brugger, Silvio D.; Frey, Pascal; Aebi, Suzanne; Hinds, Jason; Mühlemann, Kathrin (2010). Multiple colonization with S. pneumoniae before and after introduction of the seven-valent conjugated pneumococcal polysaccharide vaccine. PLoS ONE, 5(7), e11638. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0011638

Gäumann, Rahel; Mühlemann, Kathrin; Strasser, Marc; Beuret, Christian M (2010). High-throughput procedure for tick surveys of tick-borne encephalitis virus and its application in a national surveillance study in Switzerland. Applied and environmental microbiology, 76(13), pp. 4241-9. Washington, D.C.: American Society for Microbiology 10.1128/AEM.00391-10

Nicolao, Marie; Täuber, Martin G; Marian, Florica; Heusser, Peter (2010). Complementary medicine courses in Swiss medical schools: actual status and students' experience. Swiss medical weekly, 140(3-4), pp. 44-51. Muttenz: EMH Schweizerischer Ärzteverlag

Nicolao, Marie; Täuber, Martin G; Heusser, Peter (2010). How should complementary and alternative medicine be taught to medical students in Switzerland? A survey of medical experts and students. Medical teacher, 32(1), pp. 50-5. London: Informa Healthcare 10.3109/01421590902825123

Sendi, Parham; Springe, Stefanie D; Zimmerli, Stefan (2010). Lung cysts. American journal of the medical sciences, 339(1), p. 77. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/MAJ.0b013e3181af8347

Hanquet, Germaine; Perrocheau, Anne; Kissling, Esther; Bruhl, Daniel Levy; Tarragó, David; Stuart, James; Stefanoff, Pawel; Heuberger, Sigrid; Kriz, Paula; Vergison, Anne; de Greeff, Sabine C.; Amato-Gauci, Andrew; Celentano, Lucia Pastore; ECDC country experts for pneumococcal disease, incl.; Mühlemann, Kathrin (2010). Surveillance of invasive pneumococcal disease in 30 EU countries: Towards a European system? Vaccine, 28(23), pp. 3920-3928. Amsterdam: Elsevier 10.1016/j.vaccine.2010.03.069

Amaral-Zettler, Linda; Artigas, Luis Felipe; Baross, John; Bharathi P.A., Loka; Boetius, Antje; Chandramohan, Dorairajasingam; Herndl, Gerhard; Kogure, Kazuhiro; Neal, Phillip; Pedrós-Alió, Carlos; Ramette, Alban Nicolas; Schouten, Stefan; Stal, Lucas; Thessen, Anne; Leeuw, Jan de; Sogin, Mitchell (2010). A Global Census of Marine Microbes. In: McIntyre, Alasdair D. (ed.) Life in the World’s Oceans: Diversity, Distribution, and Abundance (pp. 221-245). Oxford: Blackwell Publishing Ltd 10.1002/9781444325508.ch12

Schauer, Regina; Bienhold, Christina; Ramette, Alban Nicolas; Harder, Jens (2010). Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean. The ISME journal, 4(2), pp. 159-170. Nature Publishing Group 10.1038/ismej.2009.106

Petersen, Jillian M.; Ramette, Alban Nicolas; Lott, Christian; Cambon-Bonavita, Marie-Anne; Zbinden, Magali; Dubilier, Nicole (2010). Dual symbiosis of the vent shrimp Rimicaris exoculata with filamentous gamma- and epsilonproteobacteria at four Mid-Atlantic Ridge hydrothermal vent fields. Environmental microbiology, 12(8), pp. 2204-2218. Wiley-Blackwell 10.1111/j.1462-2920.2009.02129.x

Verna, Caroline; Ramette, Alban Nicolas; Wiklund, Helena; Dahlgren, Thomas G.; Glover, Adrian G.; Gaill, Françoise; Dubilier, Nicole (2010). High symbiont diversity in the bone-eating worm Osedax mucofloris from shallow whale-falls in the North Atlantic. Environmental microbiology, 12(8), pp. 2355-2370. Wiley-Blackwell 10.1111/j.1462-2920.2010.02299.x

Orcutt, Beth N.; Joye, Samantha B.; Kleindienst, Sara; Knittel, Katrin; Ramette, Alban Nicolas; Reitz, Anja; Samarkin, Vladimir; Treude, Tina; Boetius, Antje (2010). Impact of natural oil and higher hydrocarbons on microbial diversity, distribution, and activity in Gulf of Mexico cold-seep sediments. Deep-sea research. Part 2 - topical studies in oceanography, 57(21-23), pp. 2008-2021. Elsevier Science 10.1016/j.dsr2.2010.05.014

Alonso, C; Gómez-Pereira, P; Ramette, Alban Nicolas; Ortega, L; Fuchs, BM; Amann, R (2010). Multilevel analysis of the bacterial diversity along the environmental gradient Río de la Plata–South Atlantic Ocean. Aquatic Microbial Ecology, 61(1), pp. 57-72. Inter-Research 10.3354/ame01439

Gobet, A.; Quince, C.; Ramette, Alban Nicolas (2010). Multivariate Cutoff Level Analysis (MultiCoLA) of large community data sets. Nucleic acids research, 38(15), e155. Oxford University Press 10.1093/nar/gkq545

Grünke, Stefanie; Lichtschlag, Anna; Beer, Dirk de; Kuypers, Marcel; Lösekann-Behrens, Tina; Ramette, Alban Nicolas; Boetius, Antje (2010). Novel observations of Thiobacterium, a sulfur-storing Gammaproteobacterium producing gelatinous mats. The ISME journal, 4(8), pp. 1031-1043. Nature Publishing Group 10.1038/ismej.2010.23

Knief, Claudia; Ramette, Alban Nicolas; Frances, Lisa; Alonso-Blanco, Carlos; Vorholt, Julia A (2010). Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere. The ISME journal, 4(6), pp. 719-728. Nature Publishing Group 10.1038/ismej.2010.9

Meziti, Alexandra; Ramette, Alban Nicolas; Mente, Eleni; Kormas, Konstantinos Ar. (2010). Temporal shifts of the Norway lobster (Nephrops norvegicus) gut bacterial communities. FEMS Microbiology Ecology, 74(2), pp. 472-484. Wiley 10.1111/j.1574-6941.2010.00964.x

Santillano, D.; Boetius, A.; Ramette, Alban Nicolas (2010). Improved dsrA-Based Terminal Restriction Fragment Length Polymorphism Analysis of Sulfate-Reducing Bacteria. Applied and environmental microbiology, 76(15), pp. 5308-5311. American Society for Microbiology 10.1128/AEM.03004-09

Barbier, François; Ruppé, Etienne; Hernandez, David; Lebeaux, David; Francois, Patrice; Felix, Benjamin; Desprez, Adeline; Maiga, Aminata; Woerther, Paul-Louis; Gaillard, Kevin; Jeanrot, Cécile; Wolff, Michel; Schrenzel, Jacques; Andremont, Antoine; Ruimy, Raymond (2010). Methicillin-Resistant Coagulase-Negative Staphylococci in the Community: High Homology of SCCmec IVa between Staphylococcus epidermidis and Major Clones of Methicillin-Resistant Staphylococcus aureus. Journal of infectious diseases, 202(2), pp. 270-281. Oxford University Press 10.1086/653483

2009

Klein, M; Pfister, H W; Leib, Stephen L.; Koedel, U (2009). Therapy of community-acquired acute bacterial meningitis: the clock is running. Expert opinion on pharmacotherapy, 10(16), pp. 2609-2623. Informa Healthcare 10.1517/14656560903277210

Summermatter, Kathrin (2009). Biosafety-Europe: Coordination, Harmonization and Exchange of Biosafety and Biosecurity Practices within a Pan-European Network. Applied biosafety, 14(2), p. 105. Mary Ann Liebert 10.1177/153567600901400212

Tapparel, Caroline; Cordey, Samuel; Van Belle, Sandra; Turin, Lara; Lee, Wai-Ming; Regamey, Nicolas; Meylan, Pascal; Mühlemann, Kathrin; Gobbini, Francesca; Kaiser, Laurent (2009). New molecular detection tools adapted to emerging rhinoviruses and enteroviruses. Journal of clinical microbiology, 47(6), pp. 1742-9. Washington, D.C.: American Society for Microbiology 10.1128/JCM.02339-08

Tappeiner, Christoph; Goldblum, David; Zimmerli, Stefan; Fux, Christoph; Frueh, Beatrice E (2009). Donor-to-host transmission of Candida glabrata to both recipients of corneal transplants from the same donor. Cornea, 28(2), pp. 228-30. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/ICO.0b013e318183a3e3

Sellner, Johann; Buonomano, Roberto; Nedeltchev, Krassen; Findling, Oliver; Schroth, Gerhard; Surbek, Daniel; Leib, Stephen L. (2009). A case of maternal herpes simplex virus encephalitis during late pregnancy. Nature clinical practice - neurology, 5(1), pp. 51-56. New York, N.Y.: Nature Publishing Group 10.1038/ncpneuro0972

Stickel, Felix; Droz, Sara; Patsenker, Eleonora; Bögli-Stuber, Katja; Aebi, Beat; Leib, Stephen L. (2009). Severe hepatotoxicity following ingestion of Herbalife nutritional supplements contaminated with Bacillus subtilis. Journal of hepatology, 50(1), pp. 111-117. Amsterdam: Elsevier 10.1016/j.jhep.2008.08.017

Maerki, Christa; Meuter, Simone; Liebi, Mark; Mühlemann, Kathrin; Frederick, Mitchell J; Yawalkar, Nikhil; Moser, Bernhard; Wolf, Marlene (2009). Potent and broad-spectrum antimicrobial activity of CXCL14 suggests an immediate role in skin infections. Journal of immunology, 182(1), pp. 507-14. Bethesda, Md.: American Association of Immunologists

Noti, F; Zimmerli, S; Goerre, S; Carrel, T; Suter, T (2009). [Does yoghurt gnaw at cardiac valves?]. Praxis - schweizerische Rundschau für Medizin, 98(10), pp. 547-50. Bern: Huber

Rausch, Alma-Verena; Gross, Ariane; Droz, Sara; Bodmer, Thomas; Surbek, Daniel V (2009). Group B Streptococcus colonization in pregnancy: prevalence and prevention strategies of neonatal sepsis. Journal of perinatal medicine, 37(2), pp. 124-9. Berlin: Walter de Gruyter 10.1515/JPM.2009.020

Spaniol, Violeta; Troller, Rolf; Aebi, Christoph (2009). Physiologic cold shock increases adherence of Moraxella catarrhalis to and secretion of interleukin 8 in human upper respiratory tract epithelial cells. Journal of infectious diseases, 200(10), pp. 1593-601. Cary, N.C.: The University of Chicago Press 10.1086/644640

Jetter, Marion; Heiniger, Nadja; Spaniol, Violeta; Troller, Rolf; Schaller, André; Aebi, Christoph (2009). Outer membrane porin M35 of Moraxella catarrhalis mediates susceptibility to aminopenicillins. BMC microbiology, 9, p. 188. London: BioMed Central 10.1186/1471-2180-9-188

Tapparel, Caroline; Junier, Thomas; Gerlach, Daniel; Van-Belle, Sandra; Turin, Lara; Cordey, Samuel; Mühlemann, Kathrin; Regamey, Nicolas; Aubert, John-David; Soccal, Paola M; Eigenmann, Philippe; Zdobnov, Evgeny; Kaiser, Laurent (2009). New respiratory enterovirus and recombinant rhinoviruses among circulating picornaviruses. Emerging infectious diseases, 15(5), pp. 719-726. Atlanta, Ga.: U.S. National Center for Infectious Diseases 10.3201/eid1505.081286

Täuber, M G; Mühlemann, K (2009). [Antibiotic therapy in the outpatient setting: update 2009]. Praxis - schweizerische Rundschau für Medizin, 98(16), pp. 877-83. Bern: Huber

Looney, W John; Narita, Masashi; Mühlemann, Kathrin (2009). Stenotrophomonas maltophilia: an emerging opportunist human pathogen. Lancet infectious diseases, 9(5), pp. 312-23. London: Elsevier 10.1016/S1473-3099(09)70083-0

Brugger, Silvio D.; Hathaway, Lucy J; Mühlemann, Kathrin (2009). Detection of Streptococcus pneumoniae strain cocolonization in the nasopharynx. Journal of clinical microbiology, 47(6), pp. 1750-6. Washington, D.C.: American Society for Microbiology 10.1128/JCM.01877-08

Brandenburg, Lars-Ove; Varoga, Deike; Nicolaeva, Nicoletta; Leib, Stephen L.; Podschun, Rainer; Wruck, Christoph J.; Wilms, Henrik; Lucius, Ralph; Pufe, Thomas (2009). Expression and regulation of antimicrobial peptide rCRAMP after bacterial infection in primary rat meningeal cells. Journal of neuroimmunology, 217(1-2), pp. 55-64. Amsterdam: Elsevier 10.1016/j.jneuroim.2009.10.004

Debache, Karim; Alaeddine, Ferial; Guionaud, Christophe; Monney, Thierry; Müller, Joachim; Strohbusch, Maria; Leib, Stephen L.; Grandgirard, Denis; Hemphill, Andrew (2009). Vaccination with recombinant NcROP2 combined with recombinant NcMIC1 and NcMIC3 reduces cerebral infection and vertical transmission in mice experimentally infected with Neospora caninum tachyzoites. International journal for parasitology, 39(12), pp. 1373-1384. Kidlington, UK: Elsevier 10.1016/j.ijpara.2009.04.006

Sellner, Johann; Grandgirard, Denis; Gianinazzi, Christian; Landmann, Regine M.; Leib, Stephen L. (2009). Effects of Toll-like receptor 2 agonist Pam(3)CysSK(4) on inflammation and brain damage in experimental pneumococcal meningitis. Journal of neuroimmunology, 206(1-2), pp. 28-31. Amsterdam: Elsevier 10.1016/j.jneuroim.2008.10.004

Theoulakis, Panagiotis; Goldblum, David; Zimmerli, Stefan; Muehlethaler, Konrad; Frueh, Beatrice E (2009). Keratitis resulting from Thielavia subthermophila Mouchacca. Cornea, 28(9), pp. 1067-9. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/ICO.0b013e31819717f4

Strohbusch, M.; Muller, N.; Hemphill, A.; Margos, M.; Grandgirard, D.; Leib, Stephen; Greif, G.; Gottstein, B. (2009). Neospora caninum and bone marrow-derived dendritic cells: parasite survival, proliferation, and induction of cytokine expression. Parasite immunology, 31(7), pp. 366-372. Oxford: Blackwell Scientific Publications 10.1111/j.1365-3024.2009.01112.x

Horvath, Christina E.; Brinkmann, Christian K.; Ozdoba, Christoph; Leib, Stephen; Wolf, Sebastian; Wolf-Schnurrbusch, Ute E.K. (2009). Chorioretinal nocardiosis. Retinal Cases & Brief Reports, 3(3), pp. 263-265. Lippincott Williams & Wilkins 10.1097/ICB.0b013e31817376eb

Zhao, Shuo; Ramette, Alban Nicolas; Niu, Gui-Lan; Liu, Hong; Zhou, Ning-Yi (2009). Effects of nitrobenzene contamination and of bioaugmentation on nitrification and ammonia-oxidizing bacteria in soil. FEMS Microbiology Ecology, 70(2), pp. 315-323. Wiley 10.1111/j.1574-6941.2009.00773.x

Ramette, Alban Nicolas; Boetius, Antje (2009). Crystal ball - 2009. Environmental Microbiology Reports, 1(1), pp. 3-26. Wiley 10.1111/j.1758-2229.2008.00010.x

Ramette, Alban Nicolas; Tiedje, J.M.; Boetius, A. (2009). Impact of space, time and complex environments on microbial communities. Clinical microbiology and infection, 15(Suppl. 1), pp. 60-62. Blackwell Publishing 10.1111/j.1469-0691.2008.02692.x

Schöttner, Sandra; Hoffmann, Friederike; Wild, Christian; Rapp, Hans Tore; Boetius, Antje; Ramette, Alban Nicolas (2009). Inter- and intra-habitat bacterial diversity associated with cold-water corals. The ISME journal, 3(6), pp. 756-759. Nature Publishing Group 10.1038/ismej.2009.15

Ramette, Alban Nicolas (2009). Quantitative Community Fingerprinting Methods for Estimating the Abundance of Operational Taxonomic Units in Natural Microbial Communities. Applied and environmental microbiology, 75(8), pp. 2495-2505. American Society for Microbiology 10.1128/AEM.02409-08

Böer, Simone I; Hedtkamp, Stefanie I C; van Beusekom, Justus E E; Fuhrman, Jed A; Boetius, Antje; Ramette, Alban Nicolas (2009). Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands. The ISME journal, 3(7), pp. 780-791. Nature Publishing Group 10.1038/ismej.2009.29

Kanzog, Corinna; Ramette, Alban Nicolas; Quéric, Nadia V.; Klages, Michael (2009). Response of benthic microbial communities to chitin enrichment: an in situ study in the deep Arctic Ocean. Polar Biology, 32(1), pp. 105-112. Springer 10.1007/s00300-008-0510-4

Kanzog, Corinna; Ramette, Alban Nicolas (2009). Microbial colonisation of artificial and deep-sea sediments in the Arctic Ocean. Marine ecology progress series, 30(4), pp. 391-404. Inter-Research 10.1111/j.1439-0485.2009.00290.x

2008

Sheldon, R Ann; Christen, Stephan; Ferriero, Donna M (2008). Genetic and pharmacologic manipulation of oxidative stress after neonatal hypoxia-ischemia. International journal of developmental neuroscience, 26(1), pp. 87-92. Kidlington, UK: Elsevier Science 10.1016/j.ijdevneu.2007.08.010

Spaniol, Violeta; Heiniger, Nadja; Troller, Rolf; Aebi, Christoph (2008). Outer membrane protein UspA1 and lipooligosaccharide are involved in invasion of human epithelial cells by Moraxella catarrhalis. Microbes and infection, 10(1), pp. 3-11. Paris: Elsevier Masson SAS 10.1016/j.micinf.2007.09.014

Bättig, Patrick; Mühlemann, Kathrin (2008). Influence of the spxB gene on competence in Streptococcus pneumoniae. Journal of bacteriology, 190(4), pp. 1184-9. Washington, D.C.: American Society for Microbiology 10.1128/JB.01517-07

Marschall, J; Evison, J-M; Droz, S; Studer, U C; Zimmerli, S (2008). Disseminated Tuberculosis Following Total Knee Arthroplasty in an HIV Patient. Infection, 36(3), pp. 274-278. Heidelberg: Urban & Vogel 10.1007/s15010-007-7011-1

Weiser, Barbara; Philpott, Sean; Klimkait, Thomas; Burger, Harold; Kitchen, Christina; Bürgisser, Philippe; Gorgievski, Meri; Perrin, Luc; Piffaretti, Jean-Claude; Ledergerber, Bruno (2008). HIV-1 coreceptor usage and CXCR4-specific viral load predict clinical disease progression during combination antiretroviral therapy. AIDS, 22(4), pp. 469-79. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e3282f4196c

Gehre, F.; Leib, Stephen L.; Grandgirard, Denis; Kummer, Jürg; Bühlmann, Angela; Simon, Franziska; Gäumann, R.; Kharat, A. S.; Täuber, Martin G.; Tomasz, A. (2008). Essential role of choline for pneumococcal virulence in an experimental model of meningitis. Internal medicine journal, 264(2), pp. 143-154. Sydney: Blackwell 10.1111/j.1365-2796.2008.01930.x

Sury, Matthias D.; Agarinis, Claudia; Widmer, Hans-Rudolf; Leib, Stephen L.; Christen, Stephan (2008). JNK is activated but does not mediate hippocampal neuronal apoptosis in experimental neonatal pneumococcal meningitis. Neurobiology of disease, 32(1), pp. 142-150. Amsterdam: Elsevier 10.1016/J.nbd.2008.07.006

Schneider, Michael; Mühlemann, Kathrin; Droz, Sara; Couzinet, Sabine; Casaulta, Carmen; Zimmerli, Stefan (2008). Clinical characteristics associated with isolation of small-colony variants of Staphylococcus aureus and Pseudomonas aeruginosa from respiratory secretions of patients with cystic fibrosis. Journal of clinical microbiology, 46(5), pp. 1832-4. Washington, D.C.: American Society for Microbiology 10.1128/JCM.00361-08

Sellner, Johann; Greeve, Isabell; Findling, Oliver; Kamm, Christian P.; Minten, Carsten; Engelhardt, Britta; Grandgirard, Denis; Leib, Stephen L.; Mattle, Heinrich P (2008). Effect of interferon-beta and atorvastatin on Th1/Th2 cytokines in multiple sclerosis. Neurochemistry international, 53(1-2), pp. 17-21. Amsterdam: Elsevier 10.1016/j.neuint.2008.04.004

Müller, Stefan; Schaffer, Thomas; Schoepfer, Alain M; Hilty, Annamarie; Bodmer, Thomas; Seibold, Frank (2008). Partial overlap of anti-mycobacterial, and anti-Saccharomyces cerevisiae mannan antibodies in Crohn's disease. World journal of gastroenterology, 14(23), pp. 3650-61. Beijing (China): WJG Press 10.3748/wjg.14.3650

Kersen, D; Henle-Gross, A; Droz, S; Wüst, A; Surbek, D (2008). Der B-Streptokokkennachweis im Vergleich: Kultur (Goldstandard) versus GeneWpert GBS (PCR Schnelltest). Geburtshilfe und Frauenheilkunde(68), S126. Stuttgart: Thieme

Surbek, D; Henle Gross, A; Droz, S; Kersten, D; Kind, A; Bodmer, C (2008). Performance of a new rapid PCR-based test for detection of Group B-Strep. American journal of obstetrics and gynecology, 199(6), S128. Orlando, Fla.: Elsevier 10.1016/j.ajog.2008.09.457

Stebler, Ariane; Iseli, Patricia; Mühlemann, Kathrin; Bodmer, Thomas (2008). Whole-blood interferon-gamma release assay for baseline tuberculosis screening of healthcare workers at a Swiss university hospital. Infection control and hospital epidemiology, 29(7), pp. 681-3. Thorofare, N.J.: Cambridge University Press 10.1086/588587

Hviid, Anders; Rubin, Steven; Mühlemann, Kathrin (2008). Mumps. Lancet, 371(9616), pp. 932-44. London: Elsevier 10.1016/S0140-6736(08)60419-5

Bühlmann, Manuela; Bögli-Stuber, Katja; Droz, Sara; Mühlemann, Kathrin (2008). Rapid screening for carriage of methicillin-resistant Staphylococcus aureus by PCR and associated costs. Journal of clinical microbiology, 46(7), pp. 2151-4. Washington, D.C.: American Society for Microbiology 10.1128/JCM.01957-07

Brandenburg, Lars-Ove; Varoga, Deike; Nicolaeva, Nicoletta; Leib, Stephen L.; Wilms, Henrik; Podschun, Rainer; Wruck, Christoph J; Schröder, Jens-Michael; Pufe, Thomas; Lucius, Ralph (2008). Role of glial cells in the functional expression of LL-37/rat cathelin-related antimicrobial peptide in meningitis. Journal of neuropathology and experimental neurology, 67(11), pp. 1041-1054. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/NEN.0b013e31818b4801

Grandgirard, Denis; Loeffler, Jutta M.; Fischetti, Vincent A.; Leib, Stephen L. (2008). Phage lytic enzyme Cpl-1 for antibacterial therapy in experimental pneumococcal meningitis. Journal of infectious diseases, 197(11), pp. 1519-1522. Cary, N.C.: The University of Chicago Press 10.1086/587942

Sellner, Johann; Ringer, Ralph; Baumann, Pierre; Perey, Michèl Jonzier; Schmitt, Bernhard; Leib, Stephen L. (2008). Effect of the NMDA-receptor antagonist dextromethorphan in infant rat pneumococcal meningitis. Current drug metabolism, 9(1), pp. 83-88. Hilversum: Bentham Science Publishers

Sellner, Johann; Greeve, Isabell; Leib, Stephen L.; Mattle, Heinrich P. (2008). Atorvastatin does not alter interferon Beta-induced changes of serum matrix metalloproteinase 9 and tissue inhibitor of metalloproteinase 1 in patients with multiple sclerosis. Archives of neurology, 65(5), pp. 672-674. Chicago, Ill.: American Medical Association 10.1001/archneur.65.5.672

Sellner, Johann; Greeve, I; Findling, O; Grandgirard, Denis; Leib, Stephen L.; Mattle, H P (2008). Atorvastatin does not alter serum levels of sCD95 and sCD95L in multiple sclerosis. Clinical and experimental immunology, 152(2), pp. 280-284. Oxford: Blackwell Scientific Publications 10.1111/j.1365-2249.2008.03630.x

Kipfer, Beat; Reichmuth, Markus; Büchler, Markus; Meisels, Cyrus; Bodmer, Thomas (2008). Tuberculosis in a Swiss army training camp: contact investigation using an Interferon gamma release assay. Swiss medical weekly, 138(17-18), pp. 267-72. Muttenz: EMH Schweizerischer Ärzteverlag

Ruhwald, M; Bodmer, T; Maier, C; Jepsen, M; Haaland, M B; Eugen-Olsen, J; Ravn, P (2008). Evaluating the potential of IP-10 and MCP-2 as biomarkers for the diagnosis of tuberculosis. European respiratory journal, 32(6), pp. 1607-15. Sheffield, UK: European Respiratory Society 10.1183/09031936.00055508

Jacobs, J. L.; Fasi, A. C.; Ramette, Alban Nicolas; Smith, J. J.; Hammerschmidt, R.; Sundin, G. W. (2008). Identification and Onion Pathogenicity of Burkholderia cepacia Complex Isolates from the Onion Rhizosphere and Onion Field Soil. Applied and environmental microbiology, 74(10), pp. 3121-3129. American Society for Microbiology 10.1128/AEM.01941-07

Amaral-Zettler, Linda; Peplies, Jörg; Ramette, Alban Nicolas; Fuchs, Bernhard; Ludwig, Wolfgang; Glöckner, Frank Oliver (2008). Proceedings of the international workshop on Ribosomal RNA technology, April 7–9, 2008, Bremen, Germany. Systematic and applied microbiology, 31(4), pp. 258-268. Elsevier 10.1016/j.syapm.2008.08.004

Hofer, Sandra; Brun, Reto; Maerki, Sonja; Matile, Hugues; Scheurer, Christian; Wittlin, Sergio (2008). In vitro assessment of the pharmacodynamic properties of DB75, piperaquine, OZ277 and OZ401 in cultures of Plasmodium falciparum. Journal of antimicrobial chemotherapy, 62(5), pp. 1061-1064. Oxford University Press 10.1093/jac/dkn315

2007

Goldblum, David; Fausch, Kathrin; Frueh, Beatrice E; Theurillat, Regula; Thormann, Wolfgang; Zimmerli, Stefan (2007). Ocular penetration of caspofungin in a rabbit uveitis model. Graefe's archive for clinical and experimental ophthalmology, 245(6), pp. 825-833. Berlin: Springer-Verlag 10.1007/s00417-006-0460-x

Ren, Hao; Leib, Stephen L.; Ferriero, Donna M; Täuber, Martin G.; Christen, Stephan (2007). Induction of haem oxygenase-1 causes cortical non-haem iron increase in experimental pneumococcal meningitis: evidence that concomitant ferritin up-regulation prevents iron-induced oxidative damage. Journal of neurochemistry, 100(2), pp. 532-544. Oxford: Wiley-Blackwell 10.1111/j.1471-4159.2006.04230.x

Christen, Stephan; Cattin, Isabelle; Knight, Iona; Winyard, Paul G; Blum, Jürg W; Elsasser, Theodore H (2007). Plasma S-nitrosothiol status in neonatal calves: ontogenetic associations with tissue-specific S-nitrosylation and nitric oxide synthase. Experimental biology and medicine, 232(2), pp. 309-22. Maywood, N.J.: Society for Experimental Biology & Medicine

Evison, John; Blaser, Beat; Stauffer, Edouard; Mühlemann, Kathrin (2007). Parapharyngeal abscess by Aspergillus flavus in a neutropenic patient with myelogenous leukaemia. Mycoses, 50(3), pp. 239-41. Berlin: Wiley-Blackwell 10.1111/j.0933-7407.2006.01354.x

Hoffmann, H; Loytved, G; Bodmer, T (2007). [Interferon-gamma release assays in tuberculosis diagnostics]. Internist, 48(5), 497-8, 500. Heidelberg: Springer-Medizin-Verlag 10.1007/s00108-007-1827-8

Lykkesfeldt, Jens; Trueba, Gilberto Perez; Poulsen, Henrik E; Christen, Stephan (2007). Vitamin C deficiency in weanling guinea pigs: differential expression of oxidative stress and DNA repair in liver and brain. British journal of nutrition, 98(6), pp. 1116-9. Cambridge: Cambridge University Press 10.1017/S0007114507787457

Lykkesfeldt, Jens; Morgan, Evan; Christen, Stephan; Skovgaard, Lene Theil; Moos, Torben (2007). Oxidative stress and damage in liver, but not in brain, of Fischer 344 rats subjected to dietary iron supplementation with lipid-soluble [(3,5,5-trimethylhexanoyl)ferrocene]. Journal of biochemical and molecular toxicology, 21(3), pp. 145-55. New York, N.Y.: Wiley & Sons 10.1002/jbt.20170

Sheldon, R Ann; Aminoff, Alexandra; Lee, Christina L; Christen, Stephan; Ferriero, Donna M (2007). Hypoxic preconditioning reverses protection after neonatal hypoxia-ischemia in glutathione peroxidase transgenic murine brain. Pediatric research, 61(6), pp. 666-70. New York, N.Y.: Nature Publishing Group 10.1203/pdr.0b013e318053664c

Reiter, Elke; Jiang, Qing; Christen, Stephan (2007). Anti-inflammatory properties of alpha- and gamma-tocopherol. Molecular aspects of medicine, 28(5-6), pp. 668-91. Amsterdam: Elsevier 10.1016/j.mam.2007.01.003

Grandgirard, Denis; Steiner, Oliver; Täuber, Martin G.; Leib, Stephen L. (2007). An infant mouse model of brain damage in pneumococcal meningitis. Acta neuropathologica, 114(6), pp. 609-617. Berlin: Springer-Verlag 10.1007/s00401-007-0304-8

Trampuz, Andrej; Steinhuber, Andrea; Wittwer, Matthias; Leib, Stephen L. (2007). Rapid diagnosis of experimental meningitis by bacterial heat production in cerebrospinal fluid. BMC infectious diseases, 7, p. 116. London: BioMed Central 10.1186/1471-2334-7-116

Bellac, Caroline L; Coimbra, Roney S; Simon, Franziska; Imboden, Johann; Leib, Stephen L. (2007). Gene and protein expression of galectin-3 and galectin-9 in experimental pneumococcal meningitis. Neurobiology of disease, 28(2), pp. 175-183. Amsterdam: Elsevier 10.1016/j.nbd.2007.07.005

Coimbra, Roney S; Loquet, Gérard; Leib, Stephen L. (2007). Limited efficacy of adjuvant therapy with dexamethasone in preventing hearing loss due to experimental pneumococcal meningitis in the infant rat. Pediatric research, 62(3), pp. 291-294. New York, N.Y.: Nature Publishing Group 10.1203/PDR.0b013e318123fb7c

Zimmerli, Stefan; Knecht, Urspeter; Leib, Stephen L. (2007). A model of cerebral aspergillosis in non-immunosuppressed nursing rats. Acta neuropathologica, 114(4), pp. 411-418. Berlin: Springer-Verlag 10.1007/s00401-007-0255-0

Echchannaoui, Hakim; Leib, Stephen L.; Neumann, Ulf; Landmann, Regine M. A. (2007). Adjuvant TACE inhibitor treatment improves the outcome of TLR2-/- mice with experimental pneumococcal meningitis. BMC infectious diseases, 7(25), p. 25. London: BioMed Central 10.1186/1471-2334-7-25

Grandgirard, Denis; Schürch, Christian; Cottagnoud, Philippe; Leib, Stephen L. (2007). Prevention of brain injury by the nonbacteriolytic antibiotic daptomycin in experimental pneumococcal meningitis. Antimicrobial agents and chemotherapy, 51(6), pp. 2173-2178. Washington, D.C.: American Society for Microbiology 10.1128/AAC.01014-06

Grandgirard, D; Bifrare, Y-D; Pleasure, S J; Kummer, J; Leib, Stephen L.; Tauber, Martin G. (2007). Pneumococcal meningitis induces apoptosis in recently postmitotic immature neurons in the dentate gyrus of neonatal rats. Developmental neuroscience, 29(1-2), pp. 134-142. Basel: Karger 10.1159/000096218

Sellner, Johann; Leib, Stephen L. (2007). Flu-related neurological complications: incidence and risk factors in children. Nature clinical practice - neurology, 3(11), pp. 606-607. New York, N.Y.: Nature Publishing Group 10.1038/ncpneuro0610

Morand, Brigitte; Mühlemann, Kathrin (2007). Heteroresistance to penicillin in Streptococcus pneumoniae. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 104(35), pp. 14098-103. Washington, D.C.: National Academy of Sciences NAS 10.1073/pnas.0702377104

Hathaway, Lucy J; Bättig, Patrick; Mühlemann, Kathrin (2007). In vitro expression of the first capsule gene of Streptococcus pneumoniae, cpsA, is associated with serotype-specific colonization prevalence and invasiveness. Microbiology, 153(Pt 8), pp. 2465-71. Reading, UK: Society for General Microbiology 10.1099/mic.0.2006/005066-0

Bättig, Patrick; Mühlemann, Kathrin (2007). Capsule genes of Streptococcus pneumoniae influence growth in vitro. FEMS immunology and medical microbiology, 50(3), pp. 324-9. Oxford: Blackwell 10.1111/j.1574-695X.2007.00246.x

Hathaway, Lucy J; Brugger, Silvio D.; Martynova, Alina; Aebi, Suzanne; Mühlemann, Kathrin (2007). Use of the Agilent 2100 bioanalyzer for rapid and reproducible molecular typing of Streptococcus pneumoniae. Journal of clinical microbiology, 45(3), pp. 803-9. Washington, D.C.: American Society for Microbiology 10.1128/JCM.02169-06

Schüpbach, Jörg; Gebhardt, Martin D; Tomasik, Zuzana; Niederhauser, Christoph; Yerly, Sabine; Bürgisser, Philippe; Matter, Lukas; Gorgievski, Meri; Dubs, Rolf; Schultze, Detlev; Steffen, Ingrid; Andreutti, Corinne; Martinetti, Gladys; Güntert, Bruno; Staub, Roger; Daneel, Synove; Vernazza, Pietro (2007). Assessment of recent HIV-1 infection by a line immunoassay for HIV-1/2 confirmation. PLoS medicine, 4(12), e343. San Francisco, Calif.: Public Library of Science 10.1371/journal.pmed.0040343

Hoffmann, Matthias; Reichmuth, Markus; Fantelli, Karin; Schoch, Otto D; Fierz, Walter; Furrer, Hansjörg; Vernazza, Pietro (2007). Conventional tuberculin skin testing versus T-cell-based assays in the diagnosis of latent tuberculosis infection in HIV-positive patients. AIDS, 21(3), pp. 390-2. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/QAD.0b013e328012164b

Garzoni, Christian; Francois, Patrice; Huyghe, Antoine; Couzinet, Sabine; Tapparel, Caroline; Charbonnier, Yvan; Renzoni, Adriana; Lucchini, Sacha; Lew, Daniel P; Vaudaux, Pierre; Kelley, William L; Schrenzel, Jacques (2007). A global view of Staphylococcus aureus whole genome expression upon internalization in human epithelial cells. BMC Genomics, 8, p. 171. London: BioMed Central 10.1186/1471-2164-8-171

Leib, Stephen L. (2007). An in vitro model of central nervous system infection and regeneration: neuronal stem cells as targets of brain damage and regenerative therapies in bacterial meningitis. ALTEX-Alternatives to Animal Experimentation, 24 Spec No, pp. 90-92. Springer

Ramette, Alban Nicolas; Tiedje, James M. (2007). Biogeography: An Emerging Cornerstone for Understanding Prokaryotic Diversity, Ecology, and Evolution. Microbial ecology, 53(2), pp. 197-207. Springer 10.1007/s00248-005-5010-2

Ramette, Alban Nicolas; Tiedje, J. M. (2007). Multiscale responses of microbial life to spatial distance and environmental heterogeneity in a patchy ecosystem. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 104(8), pp. 2761-2766. National Academy of Sciences NAS 10.1073/pnas.0610671104

Ramette, Alban Nicolas (2007). Multivariate analyses in microbial ecology. FEMS Microbiology Ecology, 62(2), pp. 142-160. Wiley 10.1111/j.1574-6941.2007.00375.x

2006

Rauch, A; Droz, S; Zimmerli, Stefan; Leib, Stephen L. (2006). Dysphagia in elderly women: consider tetanus. Infection, 34(1), pp. 35-38. Heidelberg: Urban & Vogel 10.1007/s15010-006-4151-7

Bättig, Patrick; Hathaway, Lucy J; Hofer, Sandra; Mühlemann, Kathrin (2006). Serotype-specific invasiveness and colonization prevalence in Streptococcus pneumoniae correlate with the lag phase during in vitro growth. Microbes and infection, 8(11), pp. 2612-7. Paris: Elsevier Masson SAS 10.1016/j.micinf.2006.07.013

Kronenberg, Andreas; Zucs, Phillip; Droz, Sara; Mühlemann, Kathrin (2006). Distribution and invasiveness of Streptococcus pneumoniae serotypes in Switzerland, a country with low antibiotic selection pressure, from 2001 to 2004. Journal of clinical microbiology, 44(6), pp. 2032-8. Washington, D.C.: American Society for Microbiology 10.1128/JCM.00275-06

Streit, Markus; Böhlen, Lorenz M; Hunziker, Thomas; Zimmerli, Stefan; Tscharner, Gion G; Nievergelt, Helga; Bodmer, Thomas; Braathen, Lasse R (2006). Disseminated Mycobacterium marinum infection with extensive cutaneous eruption and bacteremia in an immunocompromised patient. European journal of dermatology EJD, 16(1), pp. 79-83. Montrouge: John Libbey Eurotext

Sellner, Johann; Simon, Franziska; Meyding-Lamade, Uta; Leib, Stephen L. (2006). Herpes-simplex virus encephalitis is characterized by an early MMP-9 increase and collagen type IV degradation. Brain research, 1125(1), pp. 155-162. Amsterdam: Elsevier 10.1016/j.brainres.2006.09.093

Sellner, Johann; Leib, Stephen L. (2006). In bacterial meningitis cortical brain damage is associated with changes in parenchymal MMP-9/TIMP-1 ratio and increased collagen type IV degradation. Neurobiology of disease, 21(3), pp. 647-656. Amsterdam: Elsevier 10.1016/j.nbd.2005.09.007

Sury, Matthias D; Frese-Schaper, Manuela; Mühlemann, Miranda K; Schulthess, Fabienne T; Blasig, Ingolf E; Täuber, Martin G; Shaw, Sidney G; Christen, Stephan (2006). Evidence that N-acetylcysteine inhibits TNF-alpha-induced cerebrovascular endothelin-1 upregulation via inhibition of mitogen- and stress-activated protein kinase. Free radical biology & medicine, 41(9), pp. 1372-83. San Diego, Calif.: Elsevier 10.1016/j.freeradbiomed.2006.07.016

Bellac, Caroline L.; Coimbra, Roney S.; Christen, Stephan; Leib, Stephen L. (2006). Pneumococcal meningitis causes accumulation of neurotoxic kynurenine metabolites in brain regions prone to injury. Neurobiology of disease, 24(2), pp. 395-402. Amsterdam: Elsevier 10.1016/j.nbd.2006.07.014

Meli, Damian N.; Coimbra, Roney S.; Erhart, Dominik G.; Loquet, Gerard; Bellac, Caroline L.; Täuber, Martin G.; Neumann, Ulf; Leib, Stephen L. (2006). Doxycycline reduces mortality and injury to the brain and cochlea in experimental pneumococcal meningitis. Infection and immunity, 74(7), pp. 3890-3896. New York, N.Y.: American Society for Microbiology 10.1128/IAI.01949-05

Coimbra, Roney S.; Voisin, Veronique; de Saizieu, Antoine B.; Lindberg, Raija L. P.; Wittwer, Matthias; Leppert, David; Leib, Stephen L. (2006). Gene expression in cortex and hippocampus during acute pneumococcal meningitis. BMC biology, 4, p. 15. London: BioMed Central 10.1186/1741-7007-4-15

Grandgirard, Denis; Leib, Stephen L. (2006). Strategies to prevent neuronal damage in paediatric bacterial meningitis. Current opinion in pediatrics, 18(2), pp. 112-118. Philadelphia, Pa.: Lippincott Williams & Wilkins 10.1097/01.mop.0000193292.09894.b7

Lindberg, R L P; Sorsa, T; Tervahartiala, T; Hoffmann, F; Mellanen, L; Kappos, L; Schaad, U B; Leib, Stephen L.; Leppert, D (2006). Gelatinase B [matrix metalloproteinase (MMP)-9] and collagenases (MMP-8/-13) are upregulated in cerebrospinal fluid during aseptic and bacterial meningitis in children. Neuropathology & applied neurobiology, 32(3), pp. 304-317. Oxford: Blackwell Scientific Publications 10.1111/j.1365-2990.2006.00729.x

Zucker, K E; Kamberi, P; Sobel, R A; Cloud, G; Meli, D N; Clemons, K V; Stevens, D A; Williams, P L; Leib, Stephen L. (2006). Temporal expression of inflammatory mediators in brain basilar artery vasculitis and cerebrospinal fluid of rabbits with coccidioidal meningitis. Clinical and experimental immunology, 143(3), pp. 458-466. Oxford: Blackwell Scientific Publications 10.1111/j.1365-2249.2006.03011.x

Flückiger, U; Marchetti, O; Bille, J; Eggimann, P; Zimmerli, S; Imhof, A; Garbino, J; Ruef, C; Pittet, D; Täuber, M; Glauser, M; Calandra, T; Fungal, Infection Network of Switzerland (FUNGINOS) (2006). Treatment options of invasive fungal infections in adults. Swiss medical weekly, 136(29-30), pp. 447-63. Muttenz: EMH Schweizerischer Ärzteverlag

Schaller, André; Troller, Rolf; Molina, Daniel; Gallati, Sabina; Aebi, Christoph; Stutzmann Meier, Patricia (2006). Rapid typing of Moraxella catarrhalis subpopulations based on outer membrane proteins using mass spectrometry. Proteomics, 6(1), pp. 172-80. Weinheim: Wiley-VCH 10.1002/pmic.200500086

Diaz, Diana; Döbeli, Heinz; Yeboah-Manu, Dorothy; Mensah-Quainoo, Ernestina; Friedlein, Arno; Soder, Nicole; Rondini, Simona; Bodmer, Thomas; Pluschke, Gerd (2006). Use of the immunodominant 18-kiloDalton small heat shock protein as a serological marker for exposure to Mycobacterium ulcerans. Clinical and vaccine immunology, 13(12), pp. 1314-21. Washington, D.C.: American Society for Microbiology 10.1128/CVI.00254-06

Chain, P. S. G.; Denef, V. J.; Konstantinidis, K. T.; Vergez, L. M.; Agullo, L.; Reyes, V. L.; Hauser, L.; Cordova, M.; Gomez, L.; Gonzalez, M.; Land, M.; Lao, V.; Larimer, F.; LiPuma, J. J.; Mahenthiralingam, E.; Malfatti, S. A.; Marx, C. J.; Parnell, J. J.; Ramette, Alban Nicolas; Richardson, P.; ... (2006). Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 103(42), pp. 15280-15287. National Academy of Sciences NAS 10.1073/pnas.0606924103

Konstantinidis, K. T.; Ramette, Alban Nicolas; Tiedje, J. M. (2006). The bacterial species definition in the genomic era. Philosophical transactions of the Royal Society. Series B - biological sciences, 361(1475), pp. 1929-1940. Royal Society of London 10.1098/rstb.2006.1920

Konstantinidis, K. T.; Ramette, Alban Nicolas; Tiedje, J. M. (2006). Toward a More Robust Assessment of Intraspecies Diversity, Using Fewer Genetic Markers. Applied and environmental microbiology, 72(11), pp. 7286-7293. American Society for Microbiology 10.1128/AEM.01398-06

Payne, George W.; Ramette, Alban Nicolas; Rose, Helen L.; Weightman, Andrew J.; Jones, T. Hefin; Tiedje, James M.; Mahenthiralingam, Eshwar (2006). Application of a recA gene-based identification approach to the maize rhizosphere reveals novel diversity in Burkholderia species. FEMS microbiology letters, 259(1), pp. 126-132. Wiley-Blackwell 10.1111/j.1574-6968.2006.00257.x

Ramette, Alban Nicolas; Möenne-Loccoz, Yvan; Défago, Geneviève (2006). Genetic diversity and biocontrol potential of fluorescent pseudomonads producing phloroglucinols and hydrogen cyanide from Swiss soils naturally suppressive or conducive to Thielaviopsis basicola-mediated black root rot of tobacco. FEMS Microbiology Ecology, 55(3), pp. 369-381. Blackwell Publishing Ltd 10.1111/j.1574-6941.2005.00052.x

2005

Gianinazzi, Christian; Schild, Marc; Müller, Nicole; Leib, Stephen; Simon, F; Nunez, Sandra; Joss, Philipp; Gottstein, Bruno (2005). Organotypic slice cultures from rat brain tissue: a new approach for Naegleria fowleri CNS infection in vitro. Parasitology, 131(6), pp. 797-804. Cambridge University Press 10.1017/S0031182005008619

Scheidegger, Alexandra; Vonlaufen, Nathalie Françoise F.; Naguleswaran, Arunasalam; Gianinazzi, Christian; Müller, Norbert; Leib, Stephen; Hemphill, Andrew (2005). Differential effects of interferon-gamma and tumor necrosis factor-alpha on Toxoplasma gondii proliferation in organotypic rat brain slice cultures. Journal of parasitology, 91(2), pp. 307-315. American Society of Parasitologists 10.1645/GE-379R

Schmitt, B; Finckh, B; Christen, S; Lykkesfeldt, J; Schmid, ER; Bauersfeld, U; Critelli, H; Hajnal, BL; Gessler, P; Molinari, L (2005). Electroencephalographic changes after pediatric cardiac surgery with cardiopulmonary bypass: is slow wave activity unfavorable? Pediatric research, 58(4), pp. 771-8. New York, N.Y.: Nature Publishing Group 10.1203/01.PDR.0000180554.16652.4E

Christen, S; Finckh, B; Lykkesfeldt, J; Gessler, P; Frese-Schaper, M; Nielsen, P; Schmid, ER; Schmitt, B (2005). Oxidative stress precedes peak systemic inflammatory response in pediatric patients undergoing cardiopulmonary bypass operation. Free radical biology & medicine, 38(10), pp. 1323-32. San Diego, Calif.: Elsevier 10.1016/j.freeradbiomed.2005.01.016

Evison, J; Täuber, MG; Mühlemann, K (2005). [Acute infectious emergencies in adults in medical practice]. Therapeutische Umschau, 62(6), pp. 351-7. Bern: Huber

Bifrare, Yoeng-Delphine; Kummer, Jürg; Joss, Philipp; Täuber, Martin G.; Leib, Stephen (2005). Brain-derived neurotrophic factor protects against multiple forms of brain injury in bacterial meningitis. Journal of infectious diseases, 191(1), pp. 40-45. The University of Chicago Press 10.1086/426399

Ramette, Alban Nicolas; LiPuma, J. J.; Tiedje, J. M. (2005). Species Abundance and Diversity of Burkholderia cepacia Complex in the Environment. Applied and environmental microbiology, 71(3), pp. 1193-1201. American Society for Microbiology 10.1128/AEM.71.3.1193-1201.2005

Fritzsche, M.; Ammann, R.A.; Droz, Sara Christine; Bianchetti, M.G.; Aebi, Christoph (2005). Changes in antimicrobial resistance of Escherichia coli causing urinary tract infections in hospitalized children. European journal of clinical microbiology & infectious diseases, 24(3), pp. 233-235. Springer 10.1007/s10096-005-1301-2

Ritz, Nicole; Ammann, Roland A.; Casaulta Aebischer, Carmen; Gugger, Mathias; Jaton, Katia; Schmid, Ralph A.; Aebi, Christoph (2005). Failure of voriconazole to cure disseminated zygomycosis in an immunocompromised child. European journal of pediatrics, 164(4), pp. 231-235. Springer-Verlag 10.1007/s00431-004-1606-7

2004

Meli, D. N.; Loeffler, J. M.; Baumann, P.; Neumann, U.; Buhl, T.; Leppert, D.; Leib, Stephen L (2004). In pneumococcal meningitis a novel water-soluble inhibitor of matrix metalloproteinases and TNF-alpha converting enzyme attenuates seizures and injury of the cerebral cortex. Journal of neuroimmunology, 151(1-2), pp. 6-11. Elsevier 10.1016/j.jneuroim.2004.01.026

Gianinazzi, Christian; Grandgirard, Denis; Simon, Franziska; Imboden, Hans; Joss, Philipp; Täuber, Martin G.; Leib, Stephen (2004). Apoptosis of hippocampal neurons in organotypic slice culture models: direct effect of bacteria revisited. Journal of neuropathology and experimental neurology, 63(6), pp. 610-617. Lippincott Williams & Wilkins

Böttcher, T; Ren, H; Goiny, M; Gerber, J; Lykkesfeldt, J; Kuhnt, U; Lotz, M; Bunkowski, S; Werner, C; Schau, I; Spreer, A; Christen, S; Nau, R (2004). Clindamycin is neuroprotective in experimental Streptococcus pneumoniae meningitis compared with ceftriaxone. Journal of neurochemistry, 91(6), pp. 1450-60. Oxford: Wiley-Blackwell 10.1111/j.1471-4159.2004.02837.x

Jiang, X; Mu, D; Manabat, C; Koshy, AA; Christen, S; Täuber, MG; Vexler, ZS; Ferriero, DM (2004). Differential vulnerability of immature murine neurons to oxygen-glucose deprivation. Experimental neurology, 190(1), pp. 224-32. San Diego, Calif.: Elsevier 10.1016/j.expneurol.2004.07.010

Sheldon, RA; Jiang, X; Francisco, C; Christen, S; Vexler, ZS; Täuber, MG; Ferriero, DM (2004). Manipulation of antioxidant pathways in neonatal murine brain. Pediatric research, 56(4), pp. 656-62. New York, N.Y.: Nature Publishing Group 10.1203/01.PDR.0000139413.27864.50

Hathaway, LJ; Stutzmann Meier, P; Bättig, P; Aebi, S; Mühlemann, K (2004). A homologue of aliB is found in the capsule region of nonencapsulated Streptococcus pneumoniae. Journal of bacteriology, 186(12), pp. 3721-9. Washington, D.C.: American Society for Microbiology 10.1128/JB.186.12.3721-3729.2004

Kim, YS; Honkaniemi, J; Sharp, FR; Täuber, MG (2004). Expression of proinflammatory cytokines tumor necrosis factor-alpha and interleukin-1beta in the brain during experimental group B streptococcal meningitis. Molecular brain research, 128(1), pp. 95-102. Amsterdam: Elsevier 10.1016/j.molbrainres.2004.06.009

Zellweger, C; Bodmer, T; Täuber, MG; Mühlemann, K (2004). Failure of ceftriaxone in an intravenous drug user with invasive infection due to Ralstonia pickettii. Infection, 32(4), pp. 246-8. Heidelberg: Urban & Vogel 10.1007/s15010-004-3033-0

Cottagnoud, PH; Täuber, MG (2004). New therapies for pneumococcal meningitis. Expert opinion on investigational drugs, 13(4), pp. 393-401. London: Informa Healthcare 10.1517/13543784.13.4.393

Marchetti, O; Bille, J; Fluckiger, U; Eggimann, P; Ruef, C; Garbino, J; Calandra, T; Glauser, MP; Täuber, MG; Pittet, D; Fungal, Infection Network of Switzerland (2004). Epidemiology of candidemia in Swiss tertiary care hospitals: secular trends, 1991-2000. Clinical infectious diseases, 38(3), pp. 311-20. Cary, N.C.: The University of Chicago Press 10.1086/380637

Mühlemann, Kathrin; Franzini, Christine; Aebi, Christoph; Berger, Christoph; Nadal, David; Stähelin, Jody; Gnehm, Hanspeter; Posfay-Barbe, Klara; Gervaix, Alain; Sax, Hugo; Heininger, Ulrich; Bonhoeffer, Jan; Eich, Gerhard; Kind, Christian; Petignat, Christiane; Scalfaro, Pietro (2004). Prevalence of Nosocomial Infections in Swiss Children's Hospitals. Infection control and hospital epidemiology, 25(9), pp. 765-771. Cambridge University Press 10.1086/502474

Raso, Giovanna; N’Goran, Eliézer K.; Toty, Abale; Luginbühl, Anne; Adjoua, Cynthia A.; Tian-Bi, Norbert T.; Bogoch, Isaac I.; Vounatsou, Penelope; Tanner, Marcel; Utzinger, Jürg (2004). Efficacy and side effects of praziquantel against Schistosoma mansoni in a community of western Côte d'Ivoire. Transactions of the Royal Society of Tropical Medicine and Hygiene, 98(1), pp. 18-27. Royal Society of Tropical Medicine and Hygiene 10.1016/S0035-9203(03)00003-8

Raso, Giovanna; Luginbühl, Anne; Adjoua, Cinthia A; Tian-Bi, Norbert T; Silué, Kigbafori D; Matthys, Barbara; Vounatsou, Penelope; Wang, Yulan; Dumas, Marc-Emmanuel; Holmes, Elaine; Singer, Burton H; Tanner, Marcel; N'Goran, Eliézer K; Utzinger, Jürg (2004). Multiple parasite infections and their relationship to self-reported morbidity in a community of rural Côte d'Ivoire. International journal of epidemiology, 33(5), pp. 1092-1102. Oxford University Press 10.1093/ije/dyh241

Ammann, Roland A.; Aebi, Christoph; Hirt, Andreas; Ridolfi Lüthy, Annette (2004). Fever in neutropenia in children and adolescents: Evolution over time of main characteristics in a single center, 1993–2001. Supportive care in cancer, 12(12), pp. 826-832. Springer-Verlag 10.1007/s00520-004-0660-z

2003

Leib, Stephen L; Heimgartner, Chris; Bifrare, Yoeng-Delphine; Loeffler, Jutta M; Täuber, Martin G (2003). Dexamethasone aggravates hippocampal apoptosis and learning deficiency in pneumococcal meningitis in infant rats. Pediatric research, 54(3), pp. 353-357. Nature Publishing Group 10.1203/01.PDR.0000079185.67878.72

Schaper, Manuela; Leib, Stephen; Meli, Damian N; Brandes, Ralf P; Täuber, Martin G.; Christen, Stephan (2003). Differential effect of p47phox and gp91phox deficiency on the course of Pneumococcal Meningitis. Infection and immunity, 71(7), pp. 4087-4092. American Society for Microbiology 10.1128/IAI.71.7.4087-4092.2003

Ghielmetti, Marco; Ren, Hao; Leib, Stephen; Täuber, Martin G.; Christen, Stephan (2003). Impaired cortical energy metabolism but not major antioxidant defenses in experimental bacterial meningitis. Brain research, 976(2), pp. 139-148. Elsevier 10.1016/S0006-8993(03)02557-5

Fux, C; Bodmer, Thomas; Ziswiler, Hans Rudolf; Leib, Stephen (2003). [Nocardia cyriacigeorgici: First report of invasive human infection]. Deutsche medizinische Wochenschrift, 128(19), pp. 1038-1041. Thieme 10.1055/s-2003-39102

Gianinazzi, Christian; Grandgirard, Denis; Imboden, Hans; Egger, Lotti; Meli, Damian N; Bifrare, Yoeng-Delphine; Joss, Philipp; Täuber, Martin G.; Borner, Christoph; Leib, Stephen (2003). Caspase-3 mediates hippocampal apoptosis in pneumococcal meningitis. Acta neuropathologica, 105(5), pp. 499-507. Springer 10.1007/s00401-003-0672-7

Coumans, Audrey B C; Middelanis, Johannes S; Garnier, Yves; Vaihinger, Hans-Martin; Leib, Stephen L; Von Duering, Monika U; Hasaart, Tom H M; Jensen, Arne; Berger, Richard (2003). Intracisternal application of endotoxin enhances the susceptibility to subsequent hypoxic-ischemic brain damage in neonatal rats. Pediatric research, 53(5), pp. 770-775. Nature Publishing Group 10.1203/01.PDR.0000059221.40073.82

Meli, Damian N.; Christen, Stephan; Leib, Stephen L. (2003). Matrix metalloproteinase-9 in pneumococcal meningitis: activation via an oxidative pathway. Journal of infectious diseases, 187(9), pp. 1411-1415. Cary, N.C.: The University of Chicago Press 10.1086/374644

Vexler, ZS; Wong, A; Francisco, C; Manabat, C; Christen, S; Täuber, M; Ferriero, DM; Gregory, G (2003). Fructose-1,6-bisphosphate preserves intracellular glutathione and protects cortical neurons against oxidative stress. Brain research, 960(1-2), pp. 90-8. Amsterdam: Elsevier 10.1016/S0006-8993(02)03777-0

Stutzmann Meier, P; Heiniger, N; Troller, R; Aebi, C (2003). Salivary antibodies directed against outer membrane proteins of Moraxella catarrhalis in healthy adults. Infection and immunity, 71(12), pp. 6793-8. New York, N.Y.: American Society for Microbiology 10.1128/IAI.71.12.6793-6798.2003

Loeliger, B.; Caldelari, I.; Bizzini, A.; Stutzmann Meier, Patricia; Majcherczyk, P. A.; Moreillon, P. (2003). Antibiotic-dependent correlation between drug-induced killing and loss of luminescence in Streptococcus gordonii expressing luciferase. Microbial drug resistance, 9(2), pp. 123-131. Mary Ann Liebert 10.1089/107662903765826705

Kolarova, Anna; Ringer, Ralph; Täuber, Martin G.; Leib, Stephen L. (2003). Blockade of NMDA receptor subtype NR2B prevents seizures but not apoptosis of dentate gyrus neurons in bacterial meningitis in infant rats. BMC neuroscience, 4(21), p. 21. London: BioMed Central 10.1186/1471-2202-4-21

Cottagnoud, P; Gerber, CM; Majcherczyk, PA; Acosta, F; Cottagnoud, M; Neftel, K; Moreillon, P; Täuber, MG (2003). The stereochemistry of the amino acid side chain influences the inflammatory potential of muramyl dipeptide in experimental meningitis. Infection and immunity, 71(6), pp. 3663-6. New York, N.Y.: American Society for Microbiology 10.1128/IAI.71.6.3663-3666.2003

Cottagnoud, P; Pfister, M; Cottagnoud, M; Acosta, F; Täuber, MG (2003). Activities of ertapenem, a new long-acting carbapenem, against penicillin-sensitive or -resistant pneumococci in experimental meningitis. Antimicrobial agents and chemotherapy, 47(6), pp. 1943-7. Washington, D.C.: American Society for Microbiology 10.1128/AAC.47.6.1943-1947.2003

Täuber, MG (2003). [Infectious disease as a specialty--a Swiss perspective]. Deutsche medizinische Wochenschrift, 128(19), p. 1037. Stuttgart: Thieme 10.1055/s-2003-39098

Mühlemann, K; Matter, HC; Täuber, MG; Bodmer, T; Sentinel, Working Group (2003). Nationwide surveillance of nasopharyngeal Streptococcus pneumoniae isolates from children with respiratory infection, Switzerland, 1998-1999. Journal of infectious diseases, 187(4), pp. 589-596. Cary, N.C.: The University of Chicago Press 10.1086/367994

Cottagnoud, P; Cottagnoud, M; Täuber, MG (2003). Vancomycin acts synergistically with gentamicin against penicillin-resistant pneumococci by increasing the intracellular penetration of gentamicin. Antimicrobial agents and chemotherapy, 47(1), pp. 144-7. Washington, D.C.: American Society for Microbiology 10.1128/ACC.47.1.144-147.2003

Pfister, M; Zhang, L; Hammarlund-Udenaes, M; Sheiner, LB; Gerber, CM; Täuber, MG; Cottagnoud, P (2003). Modeling of transfer kinetics at the serum-cerebrospinal fluid barrier in rabbits with experimental meningitis: application to grepafloxacin. Antimicrobial agents and chemotherapy, 47(1), pp. 138-43. Washington, D.C.: American Society for Microbiology 10.1128/AAC.47.1.138-143.2003

Tauber, MG (2003). Blood-borne pathogens and HIPAA. International journal of electronic commerce, 86(6), pp. 177-8. Armonk, NY: M.E. Sharpe, Inc.

Cottagnoud, P; Täuber, MG (2003). Fluoroquinolones in the Treatment of Meningitis. Current infectious disease reports, 5(4), pp. 329-336. Philadelphia, Pa.: Current Science 10.1007/s11908-003-0011-0

Bifrare, Yoeng-Delphine; Gianinazzi, Christian; Imboden, Hans; Leib, Stephen L; Täuber, Martin G. (2003). Bacterial meningitis causes two distinct forms of cellular damage in the hippocampal dentate gyrus in infant rats. Hippocampus, 13(4), pp. 481-488. Wiley-Liss 10.1002/hipo.10142

Ramette, Alban Nicolas; Frapolli, Michele; Défago, Geneviève; Moënne-Loccoz, Yvan (2003). Phylogeny of HCN Synthase-Encoding hcnBC Genes in Biocontrol Fluorescent Pseudomonads and Its Relationship with Host Plant Species and HCN Synthesis Ability. Molecular Plant-Microbe Interactions, 16(6), pp. 525-535. American Phytopathological Society 10.1094/MPMI.2003.16.6.525

Ramette, Alban Nicolas; Moenne-Loccoz, Yvan; Défago, Geneviève (2003). Prevalence of fluorescent pseudomonads producing antifungal phloroglucinols and/or hydrogen cyanide in soils naturally suppressive or conducive to tobacco black root rot. FEMS Microbiology Ecology, 44(1), pp. 35-43. Blackwell Publishing Ltd 10.1111/j.1574-6941.2003.tb01088.x

Wyder-Westh, Claudia; Duppenthaler, Andrea; Gorgievski, Meri; Aebi, Christoph (2003). Evaluation of Two Rapid Detection Assays for Identification of Respiratory Syncytial Virus in Nasopharyngeal Secretions of Young Children. European journal of clinical microbiology & infectious diseases, 22(12), pp. 774-775. Springer 10.1007/s10096-003-1045-9

2002

Remer, Katharina A.; Pfister, Hedi; Fatzer, Rosmarie; Leib, Stephen L.; Jungi, Thomas W. (2002). The role of nitric oxide in Listeria encephalitis of ruminants and in rats intracisternally infected with Listeria monocytogenes. Berliner und Münchener tierärztliche Wochenschrift, 115(7-8), pp. 259-266. Schlütersche

Vonlaufen, Nathalie; Gianinazzi, Christian; Müller, Norbert; Simon, Franziska; Björkman, Camilla; Jungi, Thomas W.; Leib, Stephen L.; Hemphill, Andrew (2002). Infection of organotypic slice cultures from rat central nervous tissue with Neospora caninum: an alternative approach to study host-parasite interactions. International journal for parasitology, 32(5), pp. 533-542. Elsevier 10.1016/S0020-7519(01)00351-4

Müller, Norbert; Vonlaufen, Nathalie Françoise F.; Gianinazzi, Christian; Leib, Stephen L.; Hemphill, Andrew (2002). Application of real-time fluorescent PCR for quantitative assessment of Neospora caninum infections in organotypic slice cultures of rat central nervous system tissue. Journal of clinical microbiology, 40(1), pp. 252-255. American Society for Microbiology 10.1128/JCM.40.1.252-255.2002

Jiang, Q; Lykkesfeldt, J; Shigenaga, MK; Shigeno, ET; Christen, S; Ames, BN (2002). Gamma-tocopherol supplementation inhibits protein nitration and ascorbate oxidation in rats with inflammation. Free radical biology & medicine, 33(11), pp. 1534-42. San Diego, Calif.: Elsevier 10.1016/S0891-5849(02)01091-2

Christen, S; Jiang, Q; Shigenaga, MK; Ames, BN (2002). Analysis of plasma tocopherols alpha, gamma, and 5-nitro-gamma in rats with inflammation by HPLC coulometric detection. Journal of lipid research, 43(11), pp. 1978-85. Bethesda, Md.: American Society for Biochemistry and Molecular Biology ASBMB 10.1194/jlr.D200023-JLR200

Schaper, Manuela; Gergely, Suzanne; Lykkesfeldt, Jens; Zbären, Jakob; Leib, Stephen L.; Täuber, Martin G.; Christen, Stephan (2002). Cerebral vasculature is the major target of oxidative protein alterations in bacterial meningitis. Journal of neuropathology and experimental neurology, 61(7), pp. 605-13. Hagerstown, Md.: Lippincott Williams & Wilkins

Meli, Damian N.; Christen, Stephan; Leib, Stephen L.; Täuber, Martin G. (2002). Current concepts in the pathogenesis of meningitis caused by Streptococcus pneumoniae. Current opinion in infectious diseases, 15(3), pp. 253-357. Hagerstown, Md.: Wolters Kluwer Lippincott Williams & Wilkins 10.1097/00001432-200206000-00007

Pfister, H.; Remer, K. A.; Brcic, Marija; Fatzer, R.; Christen, Stephan; Leib, Stephen L.; Jungi, Thomas W. (2002). Inducible nitric oxide synthase and nitrotyrosine in listeric encephalitis: a cross-species study in ruminants. Veterinary pathology, 39(2), pp. 190-199. Middleton, Wis.: American College of Veterinary Pathologists 10.1354/vp.39-2-190

Piso, RJ; Rossi, M; Oehler, T; Nguyen, XM; Täuber, MG (2002). Fatal sepsis in an AIDS patient during therapy for Pneumocystis carinii pneumonia. Infection, 30(5), pp. 314-6. Heidelberg: Springer-Medizin-Verlag 10.1007/s15010-002-1159-5

Cottagnoud, P; Acosta, F; Cottagnoud, M; Täuber, MG (2002). Gemifloxacin is efficacious against penicillin-resistant and quinolone-resistant pneumococci in experimental meningitis. Antimicrobial agents and chemotherapy, 46(5), pp. 1607-9. Washington, D.C.: American Society for Microbiology 10.1128/AAC.46.5.1607-1609-2002

Zellweger, C; Täuber, MG (2002). [Antibiotic resistance: infections of the upper respiratory tract and bronchi. When are antibiotics necessary?]. Therapeutische Umschau, 59(1), pp. 21-9. Bern: Huber

Cottagnoud, P; Acosta, F; Cottagnoud, M; Täuber, MG (2002). Cefepime is efficacious against penicillin- and quinolone-resistant pneumococci in experimental meningitis. Journal of antimicrobial chemotherapy, 49(2), pp. 327-30. Oxford: Oxford University Press 10.1093/jac/49.2.327

Cottagnoud, P; Gerber, CM; Cottagnoud, M; Täuber, MG (2002). Gentamicin increases the efficacy of vancomycin against penicillin-resistant pneumococci in the rabbit meningitis model. Antimicrobial agents and chemotherapy, 46(1), pp. 188-90. Washington, D.C.: American Society for Microbiology 10.1128/AAC.46.1.188-190.2002

Cottagnoud, P; Acosta, F; Cottagnoud, M; Pfister, M; Täuber, MG (2002). Efficacies of BMS 284756 against penicillin-sensitive, penicillin-resistant, and quinolone-resistant pneumococci in experimental meningitis. Antimicrobial agents and chemotherapy, 46(1), pp. 184-7. Washington, D.C.: American Society for Microbiology 10.1128/AAC.46.1.184-187.2002

Williams, Paul L; Leib, Stephen; Kamberi, Perparim; Leppert, David; Sobel, Raymond A; Bifrare, Yoeng-Delphine; Clemons, Karl V; Stevens, David A (2002). Levels of matrix metalloproteinase-9 within cerebrospinal fluid in a rabbit model of coccidioidal meningitis and vasculitis. Journal of infectious diseases, 186(11), pp. 1692-1695. The University of Chicago Press 10.1086/345365

Echchannaoui, Hakim; Frei, Karl; Schnell, Christian; Leib, Stephen L.; Zimmerli, Werner; Landmann, Regine (2002). Toll-like receptor 2-deficient mice are highly susceptible to Streptococcus pneumoniae meningitis because of reduced bacterial clearing and enhanced inflammation. Journal of infectious diseases, 186(6), pp. 798-806. The University of Chicago Press 10.1086/342845

Thiermann, Sacha; Munzinger, Jürg; Bodmer, Thomas (2002). Comparison of phenotypic and genotypic methods for the detection of clarithromycin resistance in Mycobacterium avium. Journal of antimicrobial chemotherapy, 49(4), pp. 679-681. Oxford University Press 10.1093/jac/49.4.679

2001

Loeffler, Jutta M.; Bodmer, Thomas; Zimmerli, Werner; Leib, Stephen L. (2001). Nocardial brain abscess: observation of treatment strategies and outcome in Switzerland from 1992 to 1999. Infection, 29(6), pp. 337-341. Springer-Medizin-Verlag 10.1007/s15010-001-1147-1

Leppert, David; Lindberg, Raija L.P.; Kappos, Ludwig; Leib, Stephen L. (2001). Matrix metalloproteinases: multifunctional effectors of inflammation in multiple sclerosis and bacterial meningitis. Brain research reviews, 36(2-3), pp. 249-257. Elsevier 10.1016/S0165-0173(01)00101-1

Piso, R J; Leib, Stephen L. (2001). [What is your diagnosis? Basal meningitis and rhombencephalitis. Blood culture positive for Listeria monocytogenes]. Praxis - schweizerische Rundschau für Medizin, 90(19), pp. 823-824. Huber

Girault, I; Karu, AE; Schaper, M; Barcellos-Hoff, MH; Hagen, T; Vogel, DS; Ames, BN; Christen, S; Shigenaga, MK (2001). Immunodetection of 3-nitrotyrosine in the liver of zymosan-treated rats with a new monoclonal antibody: comparison to analysis by HPLC. Free radical biology & medicine, 31(11), pp. 1375-87. San Diego, Calif.: Elsevier 10.1016/S0891-5849(01)00712-2

Jiang, Q; Christen, S; Shigenaga, MK; Ames, BN (2001). gamma-tocopherol, the major form of vitamin E in the US diet, deserves more attention. American journal of clinical nutrition, 74(6), pp. 714-22. Bethesda, Md.: American Society for Nutrition, Inc. 10.1093/ajcn/74.6.714

Christen, Stephan; Schaper, Manuela; Lykkesfeldt, Jens; Siegenthaler, Corinne; Bifrare, Yoeng-Delphine; Banic, Staša; Leib, Stephen L.; Täuber, Martin G. (2001). Oxidative stress in brain during experimental bacterial meningitis: differential effects of alpha-phenyl-tert-butyl nitrone and N-acetylcysteine treatment. Free radical biology & medicine, 31(6), pp. 754-762. San Diego, Calif.: Elsevier 10.1016/S0891-5849(01)00642-6

Christen, Stephan; Bifrare, Yeong-Delphine; Siegenthaler, Corinne; Leib, Stephen L.; Täuber, Martin G. (2001). Marked elevation in cortical urate and xanthine oxidoreductase activity in experimental bacterial meningitis. Brain research, 900(2), pp. 244-251. Amsterdam: Elsevier 10.1016/S0006-8993(01)02311-3

Stutzmann Meier, P; Entenza, JM; Vaudaux, P; Francioli, P; Glauser, MP; Moreillon, P (2001). Study of Staphylococcus aureus pathogenic genes by transfer and expression in the less virulent organism Streptococcus gordonii. Infection and immunity, 69(2), pp. 657-64. New York, N.Y.: American Society for Microbiology 10.1128/IAI.69.2.657-664.2001

Almli, LM; Hamrick, SE; Koshy, AA; Täuber, MG; Ferriero, DM (2001). Multiple pathways of neuroprotection against oxidative stress and excitotoxic injury in immature primary hippocampal neurons. Developmental brain research, 132(2), pp. 121-9. Amsterdam: Elsevier 10.1016/S0165-3806(01)00302-9

Dusch, H; Täuber, MG (2001). [Community-acquired pneumonia--pathogens and assessment]. Therapeutische Umschau, 58(10), pp. 575-81. Bern: Huber

Leib, Stephen L.; Clements, John M.; Lindberg, Raija L. P.; Heimgartner, Chris; Loeffler, Jutta M.; Pfister, Luz-Andrea; Täuber, Martin G.; Leppert, David (2001). Inhibition of matrix metalloproteinases and tumour necrosis factor alpha converting enzyme as adjuvant therapy in pneumococcal meningitis. Brain, 124(9), pp. 1734-1742. Oxford: Oxford University Press 10.1093/brain/124.9.1734

Cottagnoud, P; Entenza, JM; Cottagnoud, M; Que, YA; Moreillon, P; Taüber, MG (2001). Sub-inhibitory concentrations of vancomycin prevent quinolone-resistance in a penicillin-resistant isolate of Streptococcus pneumoniae. BMC microbiology, 1(1), p. 9. London: BioMed Central 10.1186/1471-2180-1-9

Remer, K. A.; Jungi, Thomas W.; Fatzer, R.; Täuber, Martin G.; Leib, Stephen L. (2001). Nitric oxide is protective in listeric meningoencephalitis of rats. Infection and immunity, 69(6), pp. 4086-4093. New York, N.Y.: American Society for Microbiology 10.1128/IAI.69.6.4086-4093.2001

Perrig, M; Acosta, F; Cottagnoud, M; Gerber, CM; Täuber, MG; Cottagnoud, P (2001). Efficacy of gatifloxacin alone and in combination with cefepime against penicillin-resistant Streptococcus pneumoniae in a rabbit meningitis model and in vitro. Journal of antimicrobial chemotherapy, 47(5), pp. 701-4. Oxford: Oxford University Press 10.1093/jac/47.5.701

Loeffler, Jutta M.; Ringer, Ralph; Hablützel, Martin; Täuber, Martin G.; Leib, Stephen L. (2001). The free radical scavenger alpha-phenyl-tert-butyl nitrone aggravates hippocampal apoptosis and learning deficits in experimental pneumococcal meningitis. Journal of infectious diseases, 183(2), pp. 247-252. Cary, N.C.: The University of Chicago Press 10.1086/317921

Wang, Chunxia; Ramette, Alban Nicolas; Punjasamarnwong, Patchara; Zala, Marcello; Natsch, Andreas; Moenne-Loccoz, Yvan; Défago, Geneviève (2001). Cosmopolitan distribution of phlD-containing dicotyledonous crop-associated biocontrol pseudomonads of worldwide origin. FEMS Microbiology Ecology, 37(2), pp. 105-116. Blackwell Publishing Ltd 10.1111/j.1574-6941.2001.tb00858.x

Ramette, Alban Nicolas; Moënne-Loccoz, Yvan; Défago, Geneviève (2001). Polymorphism of the Polyketide Synthase Gene phlD in Biocontrol Fluorescent Pseudomonads Producing 2,4-Diacetylphloroglucinol and Comparison of PhlD with Plant Polyketide Synthases. Molecular Plant-Microbe Interactions, 14(5), pp. 639-652. American Phytopathological Society 10.1094/mpmi.2001.14.5.639

2000

Couzinet, Sabine; Cejas, Elisabeth; Schittny, Johannes; Deplazes, Peter; Weber, Rainer; Zimmerli, Stefan (2000). Phagocytic uptake of Encephalitozoon cuniculi by nonprofessional phagocytes. Infection and immunity, 68(12), pp. 6939-6945. American Society for Microbiology 10.1128/IAI.68.12.6939-6945.2000

Pfister, LA; Tureen, JH; Shaw, S; Christen, S; Ferriero, DM; Täuber, MG; Leib, Stephen L. (2000). Endothelin inhibition improves cerebral blood flow and is neuroprotective in pneumococcal meningitis. Annals of neurology, 47(3), pp. 329-335. Hoboken, N.J.: Wiley-Blackwell 10.1002/1531-8249(200003)47:3<329::AID-ANA8>3.3.CO;2-I

Lykkesfeldt, J; Christen, S; Wallock, LM; Chang, HH; Jacob, RA; Ames, BN (2000). Ascorbate is depleted by smoking and repleted by moderate supplementation: a study in male smokers and nonsmokers with matched dietary antioxidant intakes. American journal of clinical nutrition, 71(2), pp. 530-6. Bethesda, Md.: American Society for Nutrition, Inc.

Täuber, MG (2000). Pneumonia due to resistant Streptococcus pneumoniae. Schweizerische medizinische Wochenschrift, 130(49), pp. 1873-9. Basel: B. Schwabe & Co.

Cottagnoud, P; Gerber, CM; Acosta, F; Cottagnoud, M; Neftel, K; Täuber, MG (2000). Linezolid against penicillin-sensitive and -resistant pneumococci in the rabbit meningitis model. Journal of antimicrobial chemotherapy, 46(6), pp. 981-5. Oxford: Oxford University Press 10.1093/jac/46.6.981

Gerber, CM; Tovar, L; Cottagnoud, M; Neftel, KA; Täuber, MG; Cottagnoud, P (2000). Grepafloxacin against penicillin-resistant pneumococci in the rabbit meningitis model. Journal of antimicrobial chemotherapy, 46(2), pp. 249-53. Oxford: Oxford University Press 10.1093/jac/46.2.249

Leib, Stephen L.; Täuber, MG (2000). [In search of strategies for preventing brain damage as a sequela of bacterial meningitis]. Schweizerische medizinische Wochenschrift, 130(24), pp. 928-35. Basel: B. Schwabe & Co.

Cottagnoud, P; Acosta, F; Cottagnoud, M; Neftel, K; Täuber, MG (2000). Synergy between trovafloxacin and ceftriaxone against penicillin-resistant pneumococci in the rabbit meningitis model and in vitro. Antimicrobial agents and chemotherapy, 44(8), pp. 2179-81. Washington, D.C.: American Society for Microbiology 10.1128/AAC.44.8.2179-2181.2000

Auer, Marc; Pfister, Luz-Andrea; Leppert, David; Täuber, Martin G.; Leib, Stephen L. (2000). Effects of clinically used antioxidants in experimental pneumococcal meningitis. Journal of infectious diseases, 182(1), pp. 347-350. Cary, N.C.: The University of Chicago Press 10.1086/315658

Guillet, EM; Täuber, MG (2000). [The hospitalized patient with fever and mental status changes]. Schweizerische medizinische Wochenschrift, 130(4), pp. 122-7. Basel: B. Schwabe & Co.

Böhlen, LM; Mühlemann, K; Dubuis, O; Aebi, C; Täuber, MG (2000). Outbreak among drug users caused by a clonal strain of group A streptococcus. Emerging infectious diseases, 6(2), pp. 175-179. Atlanta, Ga.: U.S. National Center for Infectious Diseases

Leib, Stephen L.; Leppert, David; Clements, John; Täuber, Martin G. (2000). Matrix metalloproteinases contribute to brain damage in experimental pneumococcal meningitis. Infection and immunity, 68(2), pp. 615-620. New York, N.Y.: American Society for Microbiology 10.1128/IAI.68.2.615-620.2000

Gerber, CM; Cottagnoud, M; Neftel, K; Täuber, MG; Cottagnoud, P (2000). Evaluation of cefepime alone and in combination with vancomycin against penicillin-resistant pneumococci in the rabbit meningitis model and in vitro. Journal of antimicrobial chemotherapy, 45(1), pp. 63-8. Oxford: Oxford University Press 10.1093/jac/45.1.63

Tauber, MG; Canning, BR (2000). Sample cases of exposure. Medicine and health, Rhode Island, 83(7), pp. 215-6. Providence, RI: Rhode Island Medical Society

Leppert, David; Leib, Stephen L.; Grygar, C.; Miller, K. M.; Schaad, U. B.; Holländer, G. A. (2000). Matrix metalloproteinase (MMP)-8 and MMP-9 in cerebrospinal fluid during bacterial meningitis: association with blood-brain barrier damage and neurological sequelae. Clinical infectious diseases, 31(1), pp. 80-84. The University of Chicago Press 10.1086/313922

Leib, Stephen L.; Zimmerli, Werner (2000). Reply. Clinical infectious diseases, 30(5), pp. 837-838. The University of Chicago Press 10.1086/313779

Bodmer, Thomas; Miltner, Elizabeth; Bermudez, Luiz E. (2000). Mycobacterium avium resists exposure to the acidic conditions of the stomach. FEMS microbiology letters, 182(1), pp. 45-49. Elsevier 10.1111/j.1574-6968.2000.tb08871.x

Essers, Bettina; Burnens, André P.; Lanfranchini, Francesco M.; Somaruga, Stefano G. E.; von Vigier, Rodo O.; Schaad, Urs B.; Aebi, Christoph; Bianchetti, Mario G. (2000). Acute Community-Acquired Diarrhea Requiring Hospital Admission in Swiss Children. Clinical infectious diseases, 31(1), pp. 192-196. The University of Chicago Press 10.1086/313901

1999

Leib, Stephen; Täuber, Martin G. (1999). [Meningitis (I)--differential diagnosis; aseptic and chronic meningitis]. Therapeutische Umschau, 56(11), pp. 631-639. Huber 10.1024/0040-5930.56.11.631

Leib, Stephen; Täuber, Martin G. (1999). Pathogenesis of bacterial meningitis. Infectious disease clinics of North America, 13(3), pp. 527-548. Elsevier 10.1016/S0891-5520(05)70093-3

Garzoni, C; Leib, Stephen; Zimmerli, W (1999). [Pneumococcal meningitis as a complication of maxillary sinusitis. Purulent conjunctivitis is linked to maxillary sinusitis]. Praxis - schweizerische Rundschau für Medizin, 88(11), pp. 491-495. Huber

Gerber, CM; Cottagnoud, M; Neftel, KA; Täuber, MG; Cottagnoud, P (1999). Meropenem alone and in combination with vancomycin in experimental meningitis caused by a penicillin-resistant pneumococcal strain. European journal of clinical microbiology & infectious diseases, 18(12), pp. 866-70. Berlin: Springer 10.1007/s100960050421

Sande, M. A.; Täuber, Martin G. (1999). Pneumococcal meningitis: current pathophysiologic concepts. Microbial drug resistance, 5(4), pp. 295-299. Mary Ann Liebert 10.1089/mdr.1999.5.295

Egger, M; Muhlemann, K; Aebi, C; Taüber, MG (1999). [Infections in pregnancy]. Therapeutische Umschau, 56(10), pp. 577-82. Bern: Huber

Leib, Stephen L.; Täuber, Martin G. (1999). [Meningitis (II)--acute bacterial meningitis]. Therapeutische Umschau, 56(11), pp. 640-646. Bern: Huber 10.1024/0040-5930.56.11.640

Täuber, MG; Hess, CW (1999). [Infections of the central nervous system--no problem for the doctor?]. Therapeutische Umschau, 56(11), pp. 629-30. Bern: Huber

Martin, JN; Perdreau-Remington, F; Kartalija, M; Pasi, OG; Webb, M; Gerberding, JL; Chambers, HF; Täuber, MG; Lee, BL (1999). A randomized clinical trial of mupirocin in the eradication of Staphylococcus aureus nasal carriage in human immunodeficiency virus disease. Journal of infectious diseases, 180(3), pp. 896-9. Cary, N.C.: Oxford University Press 10.1086/314949

Michelet, C; Leib, Stephen; Bentue-Ferrer, D; Täuber, Martin G. (1999). Comparative efficacies of antibiotics in a rat model of meningoencephalitis due to Listeria monocytogenes. Antimicrobial agents and chemotherapy, 43(7), pp. 1651-1656. Washington, D.C.: American Society for Microbiology

Täuber, MG (1999). [Pneumonia: what's new?]. Schweizerische medizinische Wochenschrift, 129(14), pp. 563-9. Basel: B. Schwabe & Co.

Rodoni, D; Hänni, F; Gerber, CM; Cottagnoud, M; Neftel, K; Täuber, MG; Cottagnoud, P (1999). Trovafloxacin in combination with vancomycin against penicillin-resistant pneumococci in the rabbit meningitis model. Antimicrobial agents and chemotherapy, 43(4), pp. 963-5. Washington, D.C.: American Society for Microbiology

Täuber, MG; Moser, B (1999). Cytokines and chemokines in meningeal inflammation: biology and clinical implications. Clinical infectious diseases, 28(1), pp. 1-11. Cary, N.C.: The University of Chicago Press 10.1086/515079

Mühlemann, K; Graf, S; Täuber, MG (1999). Streptococcus bovis clone causing two episodes of endocarditis 8 years apart. Journal of clinical microbiology, 37(3), pp. 862-3. Washington, D.C.: American Society for Microbiology

Leib, Stephen; Boscacci, R; Gratzl, O; Zimmerli, W (1999). Predictive value of cerebrospinal fluid (CSF) lactate level versus CSF/blood glucose ratio for the diagnosis of bacterial meningitis following neurosurgery. Clinical infectious diseases, 29(1), pp. 69-74. The University of Chicago Press 10.1086/520184

Schaad, Heinz J.; Malinverni, Raffaele; Campbell, Lee Ann; Matter, Lukas (1999). Myocardial Infarction, Culture-Negative Endocarditis, and Chlamydia pneumoniae Infection: A Dilemma? Clinical infectious diseases, 28(1), pp. 162-163. The University of Chicago Press 10.1086/517195

Kenzelmann, M.; Mühlemann, Kathrin (1999). Substantially enhanced cloning efficiency of SAGE (Serial Analysis of Gene Expression) by adding a heating step to the original protocol. Nucleic acids research, 27(3), pp. 917-918. Oxford University Press 10.1093/nar/27.3.917

1998

Grandgirard, Denis; Studer, Erwin; Monney, Laurent; Belser, Tanja; Fellay, Isabelle; Borner, Christoph; Michel, Marcel R. (1998). Alphaviruses induce apoptosis in Bcl-2-overexpressing cells: evidence for a caspase-mediated, proteolytic inactivation of Bcl-2. EMBO journal, 17(5), pp. 1268-1278. Nature Publishing Group 10.1093/emboj/17.5.1268

Täuber, MG (1998). Rabbit model of bacterial meningitis. Clinical microbiology and infection, 4(10), pp. 557-559. Oxford: Blackwell Publishing 10.1111/j.1469-0691.2007.01839.x

Kim, YS; Liu, Q; Chow, LL; Chambers, HF; Täuber, MG (1998). Comparative efficacy of trovafloxacin in experimental endocarditis caused by ciprofloxacin-sensitive, methicillin-resistant Staphylococcus aureus. Antimicrobial agents and chemotherapy, 42(12), pp. 3325-7. Washington, D.C.: American Society for Microbiology

Gilbert, DN; Lee, BL; Dworkin, RJ; Leggett, JL; Chambers, HF; Modin, G; Täuber, MG; Sande, MA (1998). A randomized comparison of the safety and efficacy of once-daily gentamicin or thrice-daily gentamicin in combination with ticarcillin-clavulanate. American journal of medicine, 105(3), pp. 182-91. Orlando, Fla.: Elsevier 10.1016/S0002-9343(98)00244-7

Leib, Stephen L.; Kim, Young S.; Black, Stephen M.; Tureen, Jay H.; Täuber, Martin G. (1998). Inducible nitric oxide synthase and the effect of aminoguanidine in experimental neonatal meningitis. Journal of infectious diseases, 177(3), pp. 692-700. Cary, N.C.: Oxford University Press 10.1086/514226

Venetz, Iwan; Schopfer, Kurt; Mühlemann, Kathrin (1998). Paediatric, invasive pneumococcal disease in Switzerland, 1985–1994. International journal of epidemiology, 27(6), pp. 1101-1104. Oxford University Press 10.1093/ije/27.6.1101

1997

Christen, S; Woodall, AA; Shigenaga, MK; Southwell-Keely, PT; Duncan, MW; Ames, BN (1997). gamma-tocopherol traps mutagenic electrophiles such as NO(X) and complements alpha-tocopherol: physiological implications. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 94(7), pp. 3217-22. Washington, D.C.: National Academy of Sciences NAS 10.1073/pnas.94.7.3217

Shigenaga, MK; Lee, HH; Blount, BC; Christen, S; Shigeno, ET; Yip, H; Ames, BN (1997). Inflammation and NO(X)-induced nitration: assay for 3-nitrotyrosine by HPLC with electrochemical detection. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 94(7), pp. 3211-6. Washington, D.C.: National Academy of Sciences NAS 10.1073/pnas.94.7.3211

Bogdan, I.; Leib, Stephen L.; Bergeron, M.; Chow, L.; Täuber, Martin G. (1997). Tumor necrosis factor-alpha contributes to apoptosis in hippocampal neurons during experimental group B streptococcal meningitis. Journal of infectious diseases, 176(3), pp. 693-697. Cary, N.C.: The University of Chicago Press 10.1086/514092

Täuber, MG (1997). To tap or not to tap? Clinical infectious diseases, 25(2), pp. 289-91. Cary, N.C.: Oxford University Press 10.1086/514530

Kim, YS; Liu, Q; Chow, LL; Täuber, MG (1997). Trovafloxacin in treatment of rabbits with experimental meningitis caused by high-level penicillin-resistant Streptococcus pneumoniae. Antimicrobial agents and chemotherapy, 41(5), pp. 1186-9. Washington, D.C.: American Society for Microbiology

Roth, Felix; Burkart, Thomas; Mühlemann, Kathrin (1997). A New Multiantigen Immunoassay for the Quantification of IgG Antibodies to Capsular Polysaccharides of Streptococcus pneumoniae. Journal of infectious diseases, 176(2), pp. 526-529. The University of Chicago Press 10.1086/517281

1996

Leib, Stephen; Kim, Y S; Chow, L L; Sheldon, R A; Täuber, Martin G. (1996). Reactive oxygen intermediates contribute to necrotic and apoptotic neuronal injury in an infant rat model of bacterial meningitis due to group B streptococci. Journal of clinical investigation, 98(11), pp. 2632-2639. American Society for Clinical Investigation 10.1172/JCI119084

Leib, Stephen; Kim, Y S; Black, S M; Ferriero, D M; Täuber, Martin G. (1996). Detrimental effect of nitric oxide inhibition in experimental bacterial meningitis. Annals of neurology, 39(4), pp. 555-556. Wiley-Blackwell 10.1002/ana.410390422

Christen, S; Gee, P; Ames, BN (1996). Mutagenicity of nitric oxide in base pair-specific Salmonella tester strains: TA7000 series. Methods in enzymology, 269(269), pp. 267-278. New York, N.Y.: Academic Press

Kim, YS; Täuber, MG (1996). Neurotoxicity of glia activated by gram-positive bacterial products depends on nitric oxide production. Infection and immunity, 64(8), pp. 3148-53. New York, N.Y.: American Society for Microbiology

Kartalija, M; Kaye, K; Tureen, JH; Liu, Q; Täuber, MG; Elliott, BR; Sande, MA (1996). Treatment of experimental cryptococcal meningitis with fluconazole: impact of dose and addition of flucytosine on mycologic and pathophysiologic outcome. Journal of infectious diseases, 173(5), pp. 1216-21. Cary, N.C.: Oxford University Press 10.1093/infdis/173.5.1216

Lee, BL; Täuber, MG; Sadler, B; Goldstein, D; Chambers, HF (1996). Atovaquone inhibits the glucuronidation and increases the plasma concentrations of zidovudine. Clinical pharmacology & therapeutics, 59(1), pp. 14-21. New York, N.Y.: Nature Publishing Group 10.1016/S0009-9236(96)90019-3

Leib, Stephen; Kim, YS; Ferriero, DM; Täuber, Martin G. (1996). Neuroprotective effect of excitatory amino acid antagonist kynurenic acid in experimental bacterial meningitis. Journal of infectious diseases, 173(1), pp. 166-171. Cary, N.C.: Oxford University Press 10.1093/infdis/173.1.166

Mūhlemann, Kathrin; Alexander, E Russell; Weiss, Noel S; Pepe, Margaret; Schopfer, Kurt (1996). Risk Factors for Invasive Haemophilus influenzae Disease among Children 2–16 Years of Age in the Vaccine Era, Switzerland 1991–1993. International journal of epidemiology, 25(6), pp. 1280-1285. Oxford University Press 10.1093/ije/25.6.1280

1995

Kim, YS; Sheldon, RA; Elliott, BR; Liu, Q; Ferriero, DM; Täuber, MG (1995). Brain injury in experimental neonatal meningitis due to group B streptococci. Journal of neuropathology and experimental neurology, 54(4), pp. 531-9. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/00005072-199507000-00007

Kim, YS; Kennedy, S; Täuber, MG (1995). Toxicity of Streptococcus pneumoniae in neurons, astrocytes, and microglia in vitro. Journal of infectious diseases, 171(5), pp. 1363-8. Cary, N.C.: Oxford University Press 10.1093/infdis/171.5.1363

Kartalija, M; Kim, Y; White, ML; Nau, R; Tureen, JH; Täuber, MG (1995). Effect of a recombinant N-terminal fragment of bactericidal/permeability-increasing protein (rBPI23) on cerebrospinal fluid inflammation induced by endotoxin. Journal of infectious diseases, 171(4), pp. 948-53. Cary, N.C.: Oxford University Press 10.1093/infdis/171.4.948

Nau, R; Schmidt, T; Kaye, K; Froula, JL; Täuber, MG (1995). Quinolone antibiotics in therapy of experimental pneumococcal meningitis in rabbits. Antimicrobial agents and chemotherapy, 39(3), pp. 593-7. Washington, D.C.: American Society for Microbiology 10.1128/AAC.39.3.593

Bodmer, Thomas; Zürcher, Gabriela; Imboden, Paul; Telenti, Amalio (1995). Mutation position and type of substitution in the β-subunit of the RNA polymerase influence in-vitro activity of rifamycins in rifampicin-resistant Mycobacterium tuberculosis. Journal of antimicrobial chemotherapy, 35(2), pp. 345-348. Oxford University Press 10.1093/jac/35.2.345

1994

Christen, S; Thomas, SR; Garner, B; Stocker, R (1994). Inhibition by interferon-gamma of human mononuclear cell-mediated low density lipoprotein oxidation. Participation of tryptophan metabolism along the kynurenine pathway. Journal of clinical investigation, 93(5), pp. 2149-58. Ann Arbor, Mich.: American Society for Clinical Investigation 10.1172/JCI117211

Pfister, HW; Fontana, A; Täuber, MG; Tomasz, A; Scheld, WM (1994). Mechanisms of brain injury in bacterial meningitis: workshop summary. Clinical infectious diseases, 19(3), pp. 463-79. Cary, N.C.: Oxford University Press 10.1093/clinids/19.3.463

Nau, R; Kaye, K; Sachdeva, M; Sande, ER; Täuber, MG (1994). Rifampin for therapy of experimental pneumococcal meningitis in rabbits. Antimicrobial agents and chemotherapy, 38(5), pp. 1186-9. Washington, D.C.: American Society for Microbiology 10.1128/AAC.38.5.1186

Täuber, MG; Zwahlen, A (1994). Animal models for meningitis. Methods in enzymology, 235(235), pp. 93-106. New York, N.Y.: Academic Press

Leib, Stephen (1994). [A case from practice (305). Recurrent erysipelas--tinea pedis et unginum--chronic venous insufficiency]. Schweizerische Rundschau für Medizin Praxis = Revue suisse de médecine Praxis, 83(39), pp. 1089-1090.

Guerrero, C.; Stockman, L.; Marchesi, F.; Bodmer, T.; Roberts, G. D.; Telenti, A. (1994). Evaluation of the rpoB gene in rifampicin-susceptible and -resistant Mycobacterium avium and Mycobacterium intracellulare. Journal of antimicrobial chemotherapy, 33(3), pp. 661-663. Oxford University Press 10.1093/jac/33.3.661-a

1993

Schlienger, R. G.; Haefeli, W. E.; Bircher, A.; Leib, Stephen L.; Lüscher, T. F. (1993). [Drug-induced Stevens-Johnson syndrome in a patient with AIDS]. Schweizerische Rundschau fuer Medizin Praxis, 82(33), pp. 888-892.

Sullam, PM; Frank, U; Yeaman, MR; Täuber, MG; Bayer, AS; Chambers, HF (1993). Effect of thrombocytopenia on the early course of streptococcal endocarditis. Journal of infectious diseases, 168(4), pp. 910-4. Cary, N.C.: Oxford University Press 10.1093/infdis/168.4.910

Schmidt, T; Froula, J; Täuber, MG (1993). Clarithromycin lacks bactericidal activity in cerebrospinal fluid in experimental pneumococcal meningitis. Journal of antimicrobial chemotherapy, 32(4), pp. 627-32. Oxford: Oxford University Press 10.1093/jac/32.4.627

Täuber, MG; Sande, E; Fournier, MA; Tureen, JH; Sande, MA (1993). Fluid administration, brain edema, and cerebrospinal fluid lactate and glucose concentrations in experimental Escherichia coli meningitis. Journal of infectious diseases, 168(2), pp. 473-6. Cary, N.C.: Oxford University Press 10.1093/infdis/168.2.473

Schmidt, T; Täuber, MG (1993). Pharmacodynamics of antibiotics in the therapy of meningitis: infection model observations. Journal of antimicrobial chemotherapy, 31(Suppl D), pp. 61-70. Oxford: Oxford University Press 10.1093/jac/31.suppl_D.61

Guerra-Romero, L; Tureen, JH; Fournier, MA; Makrides, V; Täuber, MG (1993). Amino acids in cerebrospinal and brain interstitial fluid in experimental pneumococcal meningitis. Pediatric research, 33(5), pp. 510-3. New York, N.Y.: Nature Publishing Group 10.1203/00006450-199305000-00018

Täuber, MG; Ferriero, D; Kennedy, SL; Sheldon, RA; Guerra-Romero, L (1993). Brain levels of neuropeptide Y in experimental pneumococcal meningitis. Molecular and chemical neuropathology, 18(1-2), pp. 15-26. Clifton, N.J.: Humana Press 10.1007/BF03160019

Ang, B. S. P.; Telenti, A.; King, B.; Steckelberg, J. M.; Wilson, W. R. (1993). Candidemia from a Urinary Tract Source: Microbiological Aspects and Clinical Significance. Clinical infectious diseases, 17(4), pp. 662-666. The University of Chicago Press 10.1093/clinids/17.4.662

1992

Christen, S; Southwell-Keely, PT; Stocker, R (1992). Oxidation of 3-hydroxyanthranilic acid to the phenoxazinone cinnabarinic acid by peroxyl radicals and by compound I of peroxidases or catalase. Biochemistry, 31(34), pp. 8090-7. Washington, D.C.: American Chemical Society 10.1021/bi00149a045

Christen, S; Stocker, R (1992). Simultaneous determination of 3-hydroxyanthranilic and cinnabarinic acid by high-performance liquid chromatography with photometric or electrochemical detection. Analytical biochemistry, 200(2), pp. 273-9. San Diego, Calif.: Elsevier 10.1016/0003-2697(92)90465-J

Buffinton, GD; Christen, S; Peterhans, E; Stocker, R (1992). Oxidative stress in lungs of mice infected with influenza A virus. Free radical research communications, 16(2), pp. 99-110. London: Harwood Academic Publ. 10.3109/10715769209049163

O'Reilly, T; Kunz, S; Sande, E; Zak, O; Sande, MA; Täuber, MG (1992). Relationship between antibiotic concentration in bone and efficacy of treatment of staphylococcal osteomyelitis in rats: azithromycin compared with clindamycin and rifampin. Antimicrobial agents and chemotherapy, 36(12), pp. 2693-7. Washington, D.C.: American Society for Microbiology 10.1128/AAC.36.12.2693

Täuber, MG; Sachdeva, M; Kennedy, SL; Loetscher, H; Lesslauer, W (1992). Toxicity in neuronal cells caused by cerebrospinal fluid from pneumococcal and gram-negative meningitis. Journal of infectious diseases, 166(5), pp. 1045-50. Cary, N.C.: Oxford University Press 10.1093/infdis/166.5.1045

Guerra-Romero, L; Täuber, MG; Fournier, MA; Tureen, JH (1992). Lactate and glucose concentrations in brain interstitial fluid, cerebrospinal fluid, and serum during experimental pneumococcal meningitis. Journal of infectious diseases, 166(3), pp. 546-50. Cary, N.C.: Oxford University Press 10.1093/infdis/166.3.546

Täuber, MG; Kennedy, SL; Tureen, JH; Lowenstein, DH (1992). Experimental pneumococcal meningitis causes central nervous system pathology without inducing the 72-kd heat shock protein. American journal of pathology, 141(1), pp. 53-60. New York, N.Y.: Elsevier

Täuber, MG (1992). [Dexamethasone in bacterial meningitis]. Deutsche medizinische Wochenschrift, 117(26), pp. 1044-5. Stuttgart: Thieme

Tureen, JH; Täuber, MG; Sande, MA (1992). Effect of hydration status on cerebral blood flow and cerebrospinal fluid lactic acidosis in rabbits with experimental meningitis. Journal of clinical investigation, 89(3), pp. 947-53. Ann Arbor, Mich.: American Society for Clinical Investigation 10.1172/JCI115676

Guerra-Romero, L; Tureen, JH; Täuber, MG (1992). Pathogenesis of central nervous system injury in bacterial meningitis. Antibiotics and chemotherapy, 45(45), pp. 18-29. Basel: Karger

Lee, BL; Padula, AM; Täuber, MG; Chambers, HF; Sande, MA (1992). Oral SCH 39304 as primary, salvage, and maintenance therapy for cryptococcal meningitis in AIDS. Journal of acquired immune deficiency syndromes JAIDS, 5(6), pp. 600-4. Philadelphia, Pa.: Lippincott Williams & Wilkins

Wiestler, O. D.; Leib, Stephen L.; Brüstle, O.; Spiegel, H.; Kleihues, P. (1992). Neuropathology and pathogenesis of HIV encephalopathies. Acta histochemica, 42(Suppl.), pp. 107-114. Elsevier

Brüstle, O.; Spiegel, H.; Leib, Stephen L.; Finn, T.; Stein, H.; Kleihues, P.; Wiestler, O. D. (1992). Distribution of human immunodeficiency virus (HIV) in the CNS of children with severe HIV encephalomyelopathy. Acta neuropathologica, 84(1), pp. 24-31. Springer 10.1007/BF00427211

1991

Kleihues, P.; Leib, Stephen L.; Strittmatter, C.; Wiestler, O. D.; Lang, W. (1991). HIV encephalopathy: incidence, definition and pathogenesis. Results of a Swiss collaborative study. Acta pathologica japonica, 41(3), pp. 197-205.

Guerra-Romero, L; Kennedy, SL; Fournier, MA; Tureen, JH; Täuber, MG (1991). Use of ampicillin-sulbactam for treatment of experimental meningitis caused by a beta-lactamase-producing strain of Escherichia coli K-1. Antimicrobial agents and chemotherapy, 35(10), pp. 2037-41. Washington, D.C.: American Society for Microbiology 10.1128/AAC.35.10.2037

Täuber, MG; Burroughs, M; Niemöller, UM; Kuster, H; Borschberg, U; Tuomanen, E (1991). Differences of pathophysiology in experimental meningitis caused by three strains of Streptococcus pneumoniae. Journal of infectious diseases, 163(4), pp. 806-11. Cary, N.C.: Oxford University Press 10.1093/infdis/163.4.806

Tureen, JH; Täuber, MG; Sande, MA (1991). Effect of indomethacin on the pathophysiology of experimental meningitis in rabbits. Journal of infectious diseases, 163(3), pp. 647-9. Cary, N.C.: Oxford University Press 10.1093/infdis/163.3.647

Baumann, R; Täuber, MG; Opravil, M; Hirschel, B; Kinloch, S; Chave, JP; Pletscher, M; Lüthy, R (1991). Combined treatment with zidovudine and lymphoblast interferon-alpha in patients with HIV-related Kaposi's sarcoma. Klinische Wochenschrift, 69(8), pp. 360-7. Berlin: Springer 10.1007/BF02115785

1990

Christen, S; Peterhans, E; Stocker, R (1990). Antioxidant activities of some tryptophan metabolites: possible implication for inflammatory diseases. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 87(7), pp. 2506-10. Washington, D.C.: National Academy of Sciences NAS 10.1073/pnas.87.7.2506

Täuber, MG; Sande, MA (1990). General principles of therapy of pyogenic meningitis. Infectious disease clinics of North America, 4(4), pp. 661-76. New York, N.Y.: Elsevier

Kern, W; Kennedy, SL; Sachdeva, M; Sande, ER; Gunderson, D; Täuber, MG (1990). Evaluation of piperacillin-tazobactam in experimental meningitis caused by a beta-lactamase-producing strain of K1-positive Escherichia coli. Antimicrobial agents and chemotherapy, 34(5), pp. 697-701. Washington, D.C.: American Society for Microbiology 10.1128/AAC.34.5.697

Täuber, MG; Sande, MA (1990). Pharmacodynamics of antibiotics in experimental bacterial meningitis--two sides to rapid bacterial killing in the cerebrospinal fluid. Scandinavian journal of infectious diseases, 74(74), pp. 173-178. Oslo: Informa Healthcare

1989

Täuber, MG (1989). Brain edema, intracranial pressure and cerebral blood flow in bacterial meningitis. Pediatric infectious disease journal, 8(12), pp. 915-7. Hagerstown, Md.: Lippincott Williams & Wilkins

Täuber, MG; Sande, MA (1989). Dexamethasone in bacterial meningitis: increasing evidence for a beneficial effect. Pediatric infectious disease journal, 8(12), pp. 842-4. Hagerstown, Md.: Lippincott Williams & Wilkins

Sande, MA; Täuber, MG; Scheld, WM; McCracken, GH (1989). Pathophysiology of bacterial meningitis: summary of the workshop. Pediatric infectious disease journal, 8(12), pp. 929-33. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/00006454-198912000-00048

Courvoisier, S; Täuber, MG; Lüthy, R (1989). [Bisexuality and AIDS. Implications for heterosexual HIV infections in women]. Praxis - schweizerische Rundschau für Medizin, 78(17), pp. 486-93. Bern: Huber

Täuber, MG; Kunz, S; Zak, O; Sande, MA (1989). Influence of antibiotic dose, dosing interval, and duration of therapy on outcome in experimental pneumococcal meningitis in rabbits. Antimicrobial agents and chemotherapy, 33(4), pp. 418-23. Washington, D.C.: American Society for Microbiology 10.1128/AAC.33.4.418

Niemöller, UM; Täuber, MG (1989). Brain edema and increased intracranial pressure in the pathophysiology of bacterial meningitis. European journal of clinical microbiology & infectious diseases, 8(2), pp. 109-117. Berlin: Springer 10.1007/BF01963892

1988

Fleep, M; Täuber, MG; Lüthy, R (1988). [Clinical aspects of HIV-associated diseases]. Therapeutische Umschau, 45(9), pp. 604-10. Bern: Huber

Garlando, F; Täuber, MG; Lüthy, R (1988). [Endocarditis prophylaxis with amoxicillin, clindamycin or erythromycin? Serum bacteriostatic and bactericidal effect against Streptococcus viridans]. Deutsche medizinische Wochenschrift, 113(27), pp. 1087-91. Stuttgart: Thieme 10.1055/s-2008-1067772

Täuber, MG; Borschberg, U; Sande, MA (1988). Influence of granulocytes on brain edema, intracranial pressure, and cerebrospinal fluid concentrations of lactate and protein in experimental meningitis. Journal of infectious diseases, 157(3), pp. 456-64. Cary, N.C.: Oxford University Press 10.1093/infdis/157.3.456

Jost, J; Täuber, MG; Lüthy, R; Siegenthaler, W (1988). [HIV-associated thrombocytopenia]. Schweizerische medizinische Wochenschrift, 118(6), pp. 206-12. Basel: B. Schwabe & Co.

1987

Täuber, MG; Shibl, AM; Hackbarth, CJ; Larrick, JW; Sande, MA (1987). Antibiotic therapy, endotoxin concentration in cerebrospinal fluid, and brain edema in experimental Escherichia coli meningitis in rabbits. Journal of infectious diseases, 156(3), pp. 456-62. Cary, N.C.: Oxford University Press 10.1093/infdis/156.3.456

Chambers, HF; Morris, DL; Täuber, MG; Modin, G (1987). Cocaine use and the risk for endocarditis in intravenous drug users. Annals of internal medicine, 106(6), pp. 833-6. Philadelphia, Pa.: American College of Physicians

Terrier, B; Täuber, MG (1987). [Rare pathogens of skeletal infections and their relationship to special patient groups]. Praxis - schweizerische Rundschau für Medizin, 76(19), pp. 519-23. Bern: Huber

Täuber, MG (1987). [Skeletal infections--an interdisciplinary challenge]. Praxis - schweizerische Rundschau für Medizin, 76(19), p. 505. Bern: Huber

Kayser, FH; Täuber, MG (1987). [Diagnostic and microbiological aspects of skeletal infections]. Praxis - schweizerische Rundschau für Medizin, 76(19), pp. 524-7. Bern: Huber

Garlando, F; Rietiker, S; Täuber, MG; Flepp, M; Meier, B; Lüthy, R (1987). Single-dose ciprofloxacin at 100 versus 250 mg for treatment of uncomplicated urinary tract infections in women. Antimicrobial agents and chemotherapy, 31(2), pp. 354-6. Washington, D.C.: American Society for Microbiology 10.1128/AAC.31.2.354

1986

Jost, J; Ledergerber, B; Täuber, MG (1986). [The HIV-antibody positive patient in general practice. Guidelines for rational diagnosis and treatment]. Praxis - schweizerische Rundschau für Medizin, 75(48), pp. 1454-7. Bern: Huber

Flepp, M; Täuber, MG (1986). [Opportunistic diseases in patients with HIV infection]. Praxis - schweizerische Rundschau für Medizin, 75(48), pp. 1445-50. Bern: Huber

Täuber, MG (1986). [Therapy of bacterial meningitis]. Deutsche medizinische Wochenschrift, 111(19), pp. 747-8. Stuttgart: Thieme 10.1055/s-2008-1068526

Täuber, MG (1986). [Diagnosis of bacterial meningitis]. Deutsche medizinische Wochenschrift, 111(19), pp. 745-6. Stuttgart: Thieme 10.1055/s-2008-1068525

Small, PM; Täuber, MG; Hackbarth, CJ; Sande, MA (1986). Influence of body temperature on bacterial growth rates in experimental pneumococcal meningitis in rabbits. Infection and immunity, 52(2), pp. 484-7. New York, N.Y.: American Society for Microbiology

Flepp, M; Täuber, MG; Lüthy, R; Frauchiger, B; Barandun, J; Schütze, M; Joller, H; Frey-Wettstein, M; Vetter, W; Siegenthaler, W (1986). [Transfusion-associated LAV/HTLV-III infections in Switzerland. Report of 2 cases]. Schweizerische medizinische Wochenschrift, 116(14), pp. 426-8. Basel: B. Schwabe & Co.

Täuber, MG; Brooks-Fournier, RA; Sande, MA (1986). Experimental models of CNS infections. Contributions to concepts of disease and treatment. Neurologic clinics, 4(1), pp. 249-64. New York, N.Y.: Elsevier

1985

Täuber, MG (1985). [Antibiotic therapy of bacterial meningitis: principles and practical recommendations]. Praxis - schweizerische Rundschau für Medizin, 74(34), pp. 876-81. Bern: Huber

Garlando, F; Täuber, MG; Joos, B; Oelz, O; Lüthy, R (1985). Ciprofloxacin-induced hematuria. Infection, 13(4), pp. 177-8. Heidelberg: Springer-Medizin-Verlag 10.1007/BF01642807

Sullam, PM; Täuber, MG; Hackbarth, CJ; Chambers, HF; Scott, KG; Sande, MA (1985). Pefloxacin therapy for experimental endocarditis caused by methicillin-susceptible or methicillin-resistant strains of Staphylococcus aureus. Antimicrobial agents and chemotherapy, 27(5), pp. 685-7. Washington, D.C.: American Society for Microbiology 10.1128/AAC.27.5.685

Täuber, MG; Khayam-Bashi, H; Sande, MA (1985). Effects of ampicillin and corticosteroids on brain water content, cerebrospinal fluid pressure, and cerebrospinal fluid lactate levels in experimental pneumococcal meningitis. Journal of infectious diseases, 151(3), pp. 528-34. Cary, N.C.: Oxford University Press 10.1093/infdis/151.3.528

Sullam, PM; Drake, TA; Täuber, MG; Hackbarth, CJ; Sande, MA (1985). Influence of the developmental state of valvular lesions on the antimicrobial activity of cefotaxime in experimental enterococcal infections. Antimicrobial agents and chemotherapy, 27(3), pp. 320-3. Washington, D.C.: American Society for Microbiology 10.1128/AAC.27.3.320

Täuber, MG; Hackbarth, CJ; Scott, KG; Rusnak, MG; Sande, MA (1985). New cephalosporins cefotaxime, cefpimizole, BMY 28142, and HR 810 in experimental pneumococcal meningitis in rabbits. Antimicrobial agents and chemotherapy, 27(3), pp. 340-2. Washington, D.C.: American Society for Microbiology 10.1128/AAC.27.3.340

Sullam, PM; Täuber, MG; Hackbarth, CJ; Sande, MA (1985). Antimicrobial activity of gentamicin in experimental enterococcal endocarditis. Antimicrobial agents and chemotherapy, 27(2), pp. 224-6. Washington, D.C.: American Society for Microbiology 10.1128/AAC.27.2.224

Scheld, WM; Tauber, MG; Zak, O; Sande, MA (1985). The influence of dosing schedules and cerebrospinal fluid bactericidal activity on the therapy of bacterial meningitis. Journal of antimicrobial chemotherapy, 15(Suppl A), pp. 303-312. Oxford: Oxford University Press 10.1093/jac/15.suppl_A.303

Sullam, PM; Täuber, MG; Hackbarth, CJ; Sande, MA (1985). Therapeutic efficacy of teicoplanin in experimental enterococcal endocarditis. Antimicrobial agents and chemotherapy, 27(1), pp. 135-6. Washington, D.C.: American Society for Microbiology 10.1128/AAC.27.1.135

Reigel, F.; Burkhardt, F.; Schilt, U. (1985). Cross-reactions of immunoglobulin M and G antibodies with enterovirus-specific viral structural proteins. Journal of hygiene, 95(2), pp. 469-481. Cambridge University Press 10.1017/S0022172400062896

1984

Täuber, MG; Sande, MA (1984). Principles in the treatment of bacterial meningitis. American journal of medicine, 76(5A), pp. 224-30. Orlando, Fla.: Elsevier 10.1016/0002-9343(84)90268-7

Täuber, MG; Sande, MA (1984). Landmark perspective: The impact of penicillin on the treatment of meningitis. JAMA - the journal of the American Medical Association, 251(14), pp. 1877-80. Chicago, Ill.: American Medical Association 10.1001/jama.251.14.1877

Täuber, MG; Zak, O; Scheld, WM; Hengstler, B; Sande, MA (1984). The postantibiotic effect in the treatment of experimental meningitis caused by Streptococcus pneumoniae in rabbits. Journal of infectious diseases, 149(4), pp. 575-83. Cary, N.C.: Oxford University Press 10.1093/infdis/149.4.575

Täuber, MG; Doroshow, CA; Hackbarth, CJ; Rusnak, MG; Drake, TA; Sande, MA (1984). Antibacterial activity of beta-lactam antibiotics in experimental meningitis due to Streptococcus pneumoniae. Journal of infectious diseases, 149(4), pp. 568-74. Cary, N.C.: Oxford University Press 10.1093/infdis/149.4.568

Täuber, MG; Sande, MA (1984). Pathogenesis of bacterial meningitis: contributions by experimental models in rabbits. Infection, 1(12), S3-10. Heidelberg: Springer-Medizin-Verlag 10.1007/BF01641732

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