04 Faculty of Medicine > Service Sector > Institute for Infectious Diseases > Clinical Microbiology

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Number of items at this level: 38.

2020

Endimiani, Andrea; Ramette, Alban; Rhoads, Daniel D.; Jacobs, Michael R. (2020). The Evolving Role of the Clinical Microbiology Laboratory in Identifying Resistance in Gram-Negative Bacteria: An Update. Infectious disease clinics of North America, 34(4), pp. 659-676. Elsevier 10.1016/j.idc.2020.08.001

Reichmuth, Martina L.; Hömke, Rico; Zürcher, Kathrin; Sander, Peter; Avihingsanon, Anchalee; Collantes, Jimena; Loiseau, Chloé; Borrell, Sonia; Reinhard, Miriam; Wilkinson, Robert J; Yotebieng, Marcel; Fenner, Lukas; Böttger, Erik C; Gagneux, Sebastien; Egger, Matthias; Keller, Peter Michael (2020). Natural Polymorphisms in Mycobacterium tuberculosis Conferring Resistance to Delamanid in Drug-naïve Patients. Antimicrobial agents and chemotherapy, 64(11) American Society for Microbiology 10.1128/AAC.00513-20

Schmidt-Posthaus, Heike; Koch, Michel; Seuberlich, Torsten; Birrer, Christoph; Hirschi, Regula; Kugler, Michael (2020). Mysterious syndrome causing high mortality in wild brown trout in Eastern Switzerland, pathology and search for a possible cause. Journal of fish diseases, 43(10), pp. 1317-1324. Wiley 10.1111/jfd.13241

Muri, Lukas; Oberhänsli, Simone; Buri, Michelle; Le, Ngoc Dung; Grandgirard, Denis; Bruggmann, Rémy; Müri, René M.; Leib, Stephen L. (2020). Repetitive transcranial magnetic stimulation activates glial cells and inhibits neurogenesis after pneumococcal meningitis. PLoS ONE, 15(9), e0232863. Public Library of Science 10.1371/journal.pone.0232863

Brigger, Daniel; Riether, Carsten; van Brummelen, Robin; Mosher, Kira I; Shiu, Alicia; Ding, Zhaoqing; Zbären, Noemi; Gasser, Pascal; Guntern, Pascal; Yousef, Hanadie; Castellano, Joseph M; Storni, Federico; Graff-Radford, Neill; Britschgi, Markus; Grandgirard, Denis; Hinterbrandner, Magdalena; Siegrist, Mark; Moullan, Norman; Hofstetter, Wilhelm; Leib, Stephen L.; ... (2020). Eosinophils regulate adipose tissue inflammation and sustain physical and immunological fitness in old age. Nature metabolism, 2(8), pp. 688-702. Springer Nature 10.1038/s42255-020-0228-3

Grädel, Carole; Terrazos Miani, Miguel A.; Baumann, Christian; Barbani, Maria Teresa; Neuenschwander, Stefan; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). Whole-Genome Sequencing of Human Enteroviruses from Clinical Samples by Nanopore Direct RNA Sequencing. Viruses, 12(8) Molecular Diversity Preservation International MDPI 10.3390/v12080841

Keller, Peter M; Furrer, Hansjakob (2020). Think tuberculosis-but is thinking enough? The lancet. Infectious diseases, 20(6), pp. 639-640. Elsevier 10.1016/S1473-3099(20)30138-9

Bossart, Simon; Mühlethaler, Konrad; Garzoni, Christian; Furrer, Hansjakob (2020). Is real time PCR preferable to the direct immunofluorescence in the diagnosis of Pneumocystis jirovecii pneumonia in HIV-infected patients? BMC research notes, 13(1) Biomed Central 10.1186/s13104-020-05075-5

Pfister, Simona; Schären, Olivier P.; Beldi, Luca; Printz, Andrea; Notter, Matheus D.; Mukherjee, Mohana; Li, Hai; Limenitakis, Julien P.; Werren, Joel P.; Tandon, Disha; Cuenca Vera, Miguelangel; Hagemann, Stefanie Claudia; Uster, Stephanie S.; Terrazos, Miguel A.; Gomez de Agüero, Mercedes; Schürch, Christian M.; Matos Coelho, Fernanda; Curtiss, Roy; Slack, Emma; Balmer, Maria L.; ... (2020). Uncoupling of invasive bacterial mucosal immunogenicity from pathogenicity. Nature Communications, 11(1), p. 1978. Springer Nature 10.1038/s41467-020-15891-9

Kauer, Ronja V.; Koch, Michel Christoph; Schönecker, Lutz; Becker, Jens; Holwerda, Melle; Glaus, Anna N.; Hierweger, Melanie M.; Werder, Simea; Dijkman, Ronald; Meylan, Mireille; Seuberlich, Torsten (2020). Fecal Shedding of Bovine Astrovirus CH13/NeuroS1 in Veal Calves. Journal of clinical microbiology, 58(5) American Society for Microbiology 10.1128/JCM.01964-19

Akello, Joyce Odeke; Kamgang, Richard; Barbani, Maria Teresa; Suter-Riniker, Franziska; Leib, Stephen L; Ramette, Alban (2020). Epidemiology of Human Adenoviruses: A 20-Year Retrospective Observational Study in Hospitalized Patients in Bern, Switzerland. Clinical epidemiology, 12, pp. 353-366. Dove Medical Press 10.2147/CLEP.S246352

Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20

Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20

2019

Kuemin, Daniel; Gsell Albert, Monika; Summermatter, Katharina (2019). Case Study: Room Fumigation Using Aerosolized Hydrogen Peroxide—A Versatile and Economic Fumigation Method. Applied Biosafety, 24(4), pp. 1-7. Sage 10.1177/1535676019887049

Cameron, David R.; Ramette, Alban; Prazak, Josef; Entenza, José; Hänggi, Matthias; Que, Yok-Ai; Resch, Grégory (2019). Draft Genome Sequence of Methicillin-Resistant Staphylococcus aureus Strain AW7, Isolated from a Patient with Bacteremia. Microbiology resource announcements, 8(40) American Society for Microbiology 10.1128/MRA.00806-19

Grädel, Carole; Terrazos Miani, Miguel Angel; Barbani, Maria Teresa; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2019). Rapid and Cost-Efficient Enterovirus Genotyping from Clinical Samples Using Flongle Flow Cells. Genes, 10(9) MDPI, Molecular Diversity Preservation International 10.3390/genes10090659

Muri, Lukas Kilian; Le, Ngoc Dung; Zemp, Jonas; Grandgirard, Denis; Leib, Stephen L. (2019). Metformin mediates neuroprotection and attenuates hearing loss in experimental pneumococcal meningitis. Journal of neuroinflammation, 16(1), p. 156. BioMed Central 10.1186/s12974-019-1549-6

Hupp, Sabrina; Grandgirard, Denis; Mitchell, Timothy J.; Leib, Stephen; Hathaway, Lucy Jane; Iliev, Asparouh I. (2019). Pneumolysin and the bacterial capsule of Streptococcus pneumoniae cooperatively inhibit taxis and motility of microglia. Journal of neuroinflammation, 16(1), p. 105. BioMed Central 10.1186/s12974-019-1491-7

Schögler, Aline; Caliaro, Oliver Stephan; Brügger, Melanie; Oliveira Esteves, Blandina I.; Nita, Izabela; Gazdhar, Amiq; Geiser, Thomas; Alves, Marco P. (2019). Modulation of the unfolded protein response pathway as an antiviral approach in airway epithelial cells. Antiviral research, 162, pp. 44-50. Elsevier 10.1016/j.antiviral.2018.12.007

Lauener, Francis N; Imkamp, Frank; Lehours, Philippe; Buissonnière, Alice; Benejat, Lucie; Zbinden, Reinhard; Keller, Peter M.; Wagner, Karoline (2019). Genetic Determinants and Prediction of Antibiotic Resistance Phenotypes in Helicobacter pylori. Journal of clinical medicine, 8(1) MDPI 10.3390/jcm8010053

2018

Egli, Adrian; Blanc, Dominique S; Greub, Gilbert; Keller, Peter Michael; Lazarevic, Vladimir; Lebrand, Aitana; Leib, Stephen; Neher, Richard A; Perreten, Vincent; Ramette, Alban; Schrenzel, Jacques; Stephan, Roger; Wagner, Karolin; Wuethrich, Daniel; Xenarios, Ioannis (2018). Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform. Swiss medical weekly, 148(w14693), w14693. EMH Media 10.4414/smw.2018.14693

Kritikos, A; Neofytos, D; Khanna, N; Schreiber, P W; Boggian, K; Bille, J; Schrenzel, J; Mühlethaler, Konrad; Zbinden, R; Bruderer, T; Goldenberger, D; Pfyffer, G; Conen, A; Van Delden, C; Zimmerli, Stefan; Sanglard, D; Bachmann, D; Marchetti, O; Lamoth, F (2018). Accuracy of Sensititre YeastOne echinocandins epidemiological cut-off values for identification of FKS mutant Candida albicans and Candida glabrata: a ten year national survey of the Fungal Infection Network of Switzerland (FUNGINOS). Clinical microbiology and infection, 24(11), 1214.e1-1214.e4. Elsevier 10.1016/j.cmi.2018.05.012

Ramette, Alban Nicolas; Kronenberg, Andreas Oskar (2018). Prevalence of carbapenem-resistant Acinetobacter baumannii from 2005 to 2016 in Switzerland. BMC infectious diseases, 18(159), pp. 1-6. BioMed Central 10.1186/s12879-018-3061-5

2017

Dahdal, Suzan; Kalicki, Robert; von Steiger, Niklaus; Sendi, Parham (2017). Disseminated cryptococcal infection in a patient who had kidney transplant: discrepancy between clinical symptoms and microbiological findings. BMJ case reports, 2017 BMJ Publishing Group 10.1136/bcr-2017-219234

Buschor, Stefanie; Cuenca Vera, Miguelangel; Uster, Stephanie Sarah; Schären, Olivier; Balmer, Maria L; Terrazos Miani, Miguel Angel; Schürch, Christian M; Hapfelmeier, Siegfried Hektor (2017). Innate immunity restricts Citrobacter rodentium A/E pathogenesis initiation to an early window of opportunity. PLoS pathogens, 13(6), e1006476. Public Library of Science 10.1371/journal.ppat.1006476

2016

Koller, Roger; Barbani, Maria Teresa; Lüthi, Alexander; Zürcher, Samuel; Steinlin, Jacqueline; Leib, Stephen; Gorgievski, Meri (September 2016). Comparison of respiratory and Meningitis/Encephalitis viruses detected by FilmArray® multiplex PCR versus real-time PCR. Journal of clinical virology, 82, S39. Elsevier 10.1016/j.jcv.2016.08.076

2015

Hassenrück, Christiane; Hofmann, Laurie C.; Bischof, Kai; Ramette, Alban (2015). Seagrass biofilm communities at a naturally CO 2 -rich vent. Environmental Microbiology Reports, 7(3), pp. 516-525. Wiley 10.1111/1758-2229.12282

2014

Bittel, Pascal; Mayor, Désirée; Iseli, P; Bodmer, T; Suter-Riniker, Franziska (2014). IGRA-positive patients and interferon-gamma/interleukin-2 signatures: can the Fluorospot assay provide further information? Infection, 42(3), pp. 539-543. Springer-Medizin-Verlag 10.1007/s15010-014-0588-2

Vetter, Beatrice N; Orlowski, Vanessa; Fransen, Katrien; Niederhauser, Christoph; Aubert, Vincent; Brandenberger, Marcel; Ciardo, Diana; Dollenmaier, Günter; Klimkait, Thomas; Regenass, Stephan; Schmid, Patrick; Schottstedt, Volkmar; Suter-Riniker, Franziska; Yerly, Sabine; Shah, Cyril; Böni, Jürg; Schüpbach, Jörg (2014). Generation of a recombinant Gag virus-like-particle panel for the evaluation of p24 antigen detection by diagnostic HIV tests. PLoS ONE, 9(10), e111552. Public Library of Science 10.1371/journal.pone.0111552

2013

Xie, Gary; Ramirez, Maria S.; Marshall, Steven H.; Hujer, Kristine M.; Lo, Chien-Chi; Johnson, Shannon; Li, Po-E; Davenport, Karen; Endimiani, Andrea; Bonomo, Robert A.; Tolmasky, Marcelo E.; Chain, Patrick S. G. (2013). Genome Sequences of Two Klebsiella pneumoniae Isolates from Different Geographical Regions, Argentina (Strain JHCK1) and the United States (Strain VA360). Genome Announcements, 1(2), e00168-13. American Society for Microbiology

2005

Mühlethaler, K.; Scheurer, E.; Zollinger, U.; Markwalder, R.; Nguyen, X. M. (2005). Fulminant Cerebral Malaria in a Swiss Patient. Infection, 33(1), pp. 33-35. Springer-Medizin-Verlag 10.1007/s15010-005-3166-9

1997

Matter, Lukas; Kogelschatz, Karen; Germann, Daniel (1997). Serum Levels of Rubella Virus Antibodies Indicating Immunity: Response to Vaccination of Subjects with Low or Undetectable Antibody Concentrations. Journal of infectious diseases, 175(4), pp. 749-755. The University of Chicago Press 10.1086/513967

1994

Guerrero, C.; Stockman, L.; Marchesi, F.; Bodmer, T.; Roberts, G. D.; Telenti, A. (1994). Evaluation of the rpoB gene in rifampicin-susceptible and -resistant Mycobacterium avium and Mycobacterium intracellulare. Journal of antimicrobial chemotherapy, 33(3), pp. 661-663. Oxford University Press 10.1093/jac/33.3.661-a

1986

Gerber, Andreas U.; Brugger, Hans-Peter; Feller, Charlotte; Stritzko, Tomas; Stalder, Beat (1986). Antibiotic Therapy of Infections Due to Pseudomonas aeruginosa in Normal and Granulocytopenic Mice: Comparison of Murine and Human Pharmacokinetics. Journal of infectious diseases, 153(1), pp. 90-97. The University of Chicago Press 10.1093/infdis/153.1.90

1985

Gerber, A. U.; Feller-Segessenmann, C. (1985). In-vivo assessment of in-vitro killing patterns of Pseudomonas aeruginosa. Journal of antimicrobial chemotherapy, 15(suppl A), pp. 201-206. Oxford University Press 10.1093/jac/15.suppl_A.201

Just, Max; Just, Vroni; Berger, Rosemarie; Burkhardt, Felix; Schilt, Ueli (1985). Duration of Immunity After Rubella Vaccination: A Long-Term Study in Switzerland. Reviews of infectious diseases, 7(Suppl. 1), S91-S94. The University of Chicago Press 10.1093/clinids/7.Supplement_1.S91

1983

Gerber, A. U.; Craig, W. A.; Brugger, H.-P.; Feller, C.; Vastola, A. P.; Brandel, J. (1983). Impact of Dosing Intervals on Activity of Gentamicin and Ticarcillin Against Pseudomonas aeruginosa in Granulocytopenic Mice. Journal of infectious diseases, 147(5), pp. 910-917. The University of Chicago Press 10.1093/infdis/147.5.910

1982

Gerber, Andreas U.; Wiprachtiger, Peter; Stettler-Spichiger, Ursula; Lebek, Gerhard (1982). Constant Infusions vs. Intermittent Doses of Gentamicin Against Pseudomonas aeruginosa in Vitro. Journal of infectious diseases, 145(4), pp. 554-560. The University of Chicago Press 10.1093/infdis/145.4.554

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