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Suter, Corinne; Colakovic, Minela; Bieri, Jan; Gultom, Mitra; Dijkman, Ronald; Ros, Carlos (2023). Globoside and the mucosal pH mediate parvovirus B19 entry through the epithelial barrier. (In Press). PLoS pathogens, 19(5), e1011402. Public Library of Science 10.1371/journal.ppat.1011402
Gasser, Michael; Cassini, Alessandro; Lo Fo Wong, Danilo; Gelormini, Marcello; Nahrgang, Saskia Andrea; Zingg, Walter; Kronenberg, Andreas Oskar (2023). Associated deaths and disability-adjusted life-years caused by infections with antibiotic-resistant bacteria in Switzerland, 2010 to 2019. Eurosurveillance, 28(20) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2023.28.20.2200532
Sendi, Parham; Lora-Tamayo, Jaime; Cortes-Penfield, Nicolas W; Uçkay, Ilker (2023). Early switch from IV to oral antibiotic treatment in bone and joint infections. (In Press). Clinical microbiology and infection Elsevier 10.1016/j.cmi.2023.05.008
Geis, Daniel; Canova, Nina; Lhopitallier, Loïc; Kronenberg, Andreas; Meuwly, Jean-Yves; Senn, Nicolas; Mueller, Yolanda; Fasseur, Fabienne; Boillat-Blanco, Noémie (2023). Exploration of the Acceptance of the Use of Procalcitonin Point-of-Care Testing and Lung Ultrasonography by General Practitioners to Decide on Antibiotic Prescriptions for Lower Respiratory Infections: A Qualitative Study. BMJ open, 13(5), e063922. BMJ Publishing Group 10.1136/bmjopen-2022-063922
Autier, Brice; Gottstein, Bruno; Millon, Laurence; Ramharter, Michael; Gruener, Beate; Bresson-Hadni, Solange; Dion, Sarah; Robert-Gangneux, Florence (2023). Alveolar echinococcosis in immunocompromised hosts. Clinical microbiology and infection, 29(5), pp. 593-599. Elsevier 10.1016/j.cmi.2022.12.010
Neves, Aitana; Walther, Daniel; Martin-Campos, Trinidad; Barbie, Valerie; Bertelli, Claire; Blanc, Dominique; Bouchet, Gérard; Erard, Frédéric; Greub, Gilbert; Hirsch, Hans H; Huber, Michael; Kaiser, Laurent; Leib, Stephen L; Leuzinger, Karoline; Lazarevic, Vladimir; Mäusezahl, Mirjam; Molina, Jorge; Neher, Richard A; Perreten, Vincent; Ramette, Alban; ... (2023). The Swiss Pathogen Surveillance Platform - towards a nation-wide One Health data exchange platform for bacterial, viral and fungal genomics and associated metadata. Microbial genomics, 9(5) Microbiology Society 10.1099/mgen.0.001001
Campos-Madueno, Edgar I; Moser, Aline I; Keller, Peter M; Perreten, Vincent; Poirel, Laurent; Nordmann, Patrice; Endimiani, Andrea (2023). Evaluation of Phenotypic Tests to Detect Extended-Spectrum β-Lactamase (ESBL)-Producing Klebsiella oxytoca Complex Strains. Journal of clinical microbiology, 61(4), e0170622. American Society for Microbiology 10.1128/jcm.01706-22
Wurcel, Alysse G; DeSimone, Daniel C; Marks, Laura; Baddour, Larry M; Sendi, Parham (2023). Which trial do we need? Long-acting glycopeptides versus oral antibiotics for infective endocarditis in patients with substance use disorder. (In Press). Clinical microbiology and infection Elsevier 10.1016/j.cmi.2023.04.005
Anderegg, Nanina; Schwab, Tiana; Borcard, Loïc; Mugglin, Catrina; Keune-Dübi, Bettina; Ramette, Alban; Fenner, Lukas (2023). Population-based SARS-CoV-2 whole genome sequencing and contact tracing during the COVID-19 pandemic in Switzerland. (In Press). Journal of infectious diseases Oxford University Press 10.1093/infdis/jiad074
Ackermann-Gäumann, Rahel; Eyer, Claudia; Vock, Michael; Gowland, Peter; Tinguely, Caroline; Leib, Stephen L; Bori, Mauro; Buser, Andreas; Fontana, Stefano; Thierbach, Jutta; Weingand, Tina; Niederhauser, Christoph (2023). Prevalence of anti-tick-borne encephalitis virus (TBEV) antibodies in Swiss blood donors in 2014-2015. Blood transfusion, 21(2), pp. 100-109. SIMTI Servizi Srl 10.2450/2022.0099-22
Campos-Madueno, Edgar I; Moradi, Melika; Eddoubaji, Yasmine; Shahi, Fatemeh; Moradi, Sina; Bernasconi, Odette J; Moser, Aline I; Endimiani, Andrea (2023). Intestinal colonization with multidrug-resistant Enterobacterales: screening, epidemiology, clinical impact, and strategies to decolonize carriers. European journal of clinical microbiology & infectious diseases, 42(3), pp. 229-254. Springer 10.1007/s10096-023-04548-2
Sudatip, Duangdao; Mostacci, Nadezda; Tiengrim, Surapee; Thamlikitkul, Visanu; Chasiri, Kittipong; Kritiyakan, Anamika; Phanprasit, Wantanee; Thinphovong, Chuanphot; Abdallah, Rim; Baron, Sophie Alexandra; Rolain, Jean-Marc; Morand, Serge; Oppliger, Anne; Hilty, Markus (2023). The risk of pig and chicken farming for carriage and transmission of Escherichia coli containing extended-spectrum beta-lactamase (ESBL) and mobile colistin resistance (mcr) genes in Thailand. Microbial genomics, 9(3) Microbiology Society 10.1099/mgen.0.000951
Sendi, Parham; Martinez, Aurélien E. (2023). Oritavancin - Ein langwirksames Reserveantibiotikum. Swiss medical forum, 23(08), pp. 920-923. EMH Schweizerischer Ärzteverlag AG 10.4414/smf.2023.09334
Labarile, Marco; Loosli, Tom; Zeeb, Marius; Kusejko, Katharina; Huber, Michael; Hirsch, Hans H; Perreau, Matthieu; Ramette, Alban; Yerly, Sabine; Cavassini, Matthias; Battegay, Manuel; Rauch, Andri; Calmy, Alexandra; Notter, Julia; Bernasconi, Enos; Fux, Christoph; Günthard, Huldrych F; Pasin, Chloé; Kouyos, Roger D (2023). Quantifying and predicting ongoing Human Immunodeficiency Virus Type 1 (HIV-1) transmission dynamics in Switzerland using a distance-based clustering approach. The journal of infectious diseases, 227(4), pp. 554-564. Oxford University Press 10.1093/infdis/jiac457
Knüsli, José; Lhopitallier, Loïc; Kronenberg, Andreas; Meuwly, Jean-Yves; Opota, Onya; Perrenoud, Marc-Antoine; Page, Marie-Anne; Kain, Kevin C; Mamin, Aline; D'Acremont, Valérie; Senn, Nicolas; Mueller, Yolanda; Locatelli, Isabella; Boillat-Blanco, Noémie (2023). Overruling of Procalcitonin-Guided Antibiotics for Lower Respiratory Tract Infections in Primary Care: Ancillary Study of a Randomized Controlled Trial. Antibiotics, 12(2) MDPI 10.3390/antibiotics12020377
Bigi, Sandra; Ramette, Alban; Barbani, Maria Teresa; Bieri, Andreas; Hoffmann, Angelika; Aebi, Christoph (2023). Acute flaccid myelitis in Switzerland - association with enterovirus D68. Swiss medical weekly, 153, p. 40045. EMH Schweizerischer Ärzteverlag 10.57187/smw.2023.40045
Moser, Aline I; Eddoubaji, Yasmine; Campos-Madueno, Edgar I; Endimiani, Andrea (2023). Complete Genome Sequence of Entomomonas sp. Strain E2T0, Isolated from the Darkling Beetle Zophobas morio Larvae. Microbiology resource announcements, 12(1), e0117622. American Society for Microbiology 10.1128/mra.01176-22
Müller, Annelies; Lekhuleni, Cebile; Hupp, Sabrina; du Plessis, Mignon; Holivololona, Lalaina; Babiichuk, Eduard; Leib, Stephen L.; Grandgirard, Denis; Iliev, Asparouh I.; von Gottberg, Anne; Hathaway, Lucy J. (2023). Meningitis-associated pneumococcal serotype 8, ST 53, strain is hypervirulent in a rat model and has non-haemolytic pneumolysin which can be attenuated by liposomes. Frontiers in cellular and infection microbiology, 12 Frontiers 10.3389/fcimb.2022.1106063
Le, Ngoc Dung; Ricci, Susanna; Grandgirard, Denis; Leib, Stephen L (2023). Experimental meningitis by Streptococcus pneumoniae and Neisseria meningitidis in rodents. In: Handbook of Animal Models in Neurological Disorders (pp. 329-341). Elsevier 10.1016/B978-0-323-89833-1.00050-1
Herzog, Mathias K-M; Cazzaniga, Monica; Peters, Audrey; Shayya, Nizar; Beldi, Luca; Hapfelmeier, Siegfried Hektor; Heimesaat, Markus M; Bereswill, Stefan; Frankel, Gad; Gahan, Cormac G M; Hardt, Wolf-Dietrich (2023). Mouse models for bacterial enteropathogen infections: insights into the role of colonization resistance. Gut microbes, 15(1), p. 2172667. Taylor & Francis Group 10.1080/19490976.2023.2172667
D'Incau, Stéphanie Maria; Atkinson, Andrew; Leitner, Lorenz; Kronenberg, Andreas; Kessler, Thomas M; Marschall, Jonas (2023). Bacterial species and antimicrobial resistance differ between catheter and non-catheter-associated urinary tract infections: Data from a national surveillance network. Antimicrobial stewardship & healthcare epidemiology, 3(1), e55. Cambridge University Press 10.1017/ash.2022.340
Moser, Aline I; Campos-Madueno, Edgar I; Perreten, Vincent; Endimiani, Andrea (2022). Genome stability during serial sub-culturing in hyperepidemic multidrug-resistant Klebsiella pneumoniae and Escherichia coli. Journal of global antimicrobial resistance, 31, pp. 152-161. Elsevier 10.1016/j.jgar.2022.08.014
Sendi, Parham; Branca, Mattia; Büchi, Annina Elisabeth; Widmer, Nadja; Tande, Aaron J; Gowland, Peter (2022). The disease burden of Delta and Omicron variants of SARS-CoV-2 in a Predominantly Vaccinated and healthy cohort [letter to the editor]. Clinical microbiology and infection, 28(12), pp. 1659-1661. Elsevier 10.1016/j.cmi.2022.08.019
Campos-Madueno, Edgar I; Moser, Aline I; Jost, Géraldine; Maffioli, Carola; Bodmer, Thomas; Perreten, Vincent; Endimiani, Andrea (2022). Erratum to 'Carbapenemase-producing Klebsiella pneumoniae strains in Switzerland: human and non-human settings may share high-risk clones' [Journal of Global Antimicrobial Resistance 28 (2022) 206-215]. Journal of global antimicrobial resistance, 31(394), p. 394. Elsevier 10.1016/j.jgar.2022.08.020
Sudatip, Duangdao; Mostacci, Nadezda; Thamlikitkul, Visanu; Oppliger, Anne; Hilty, Markus (2022). Influence of occupational exposure to pigs or chickens on human gut microbiota composition in Thailand. One health, 15(100463), p. 100463. Elsevier 10.1016/j.onehlt.2022.100463
Lux, Janine; Holivololona, Lalaina; San Millan Gutierrez, Raquel; Hilty, Markus; Ramette, Alban; Heller, Manfred; Hathaway, Lucy J (2022). AmiA and AliA peptide ligands are secreted by Klebsiella pneumoniae and inhibit growth of Streptococcus pneumoniae. Scientific reports, 12(1), p. 22268. Springer Nature 10.1038/s41598-022-26838-z
Marchionatti, Emma; Kittl, Sonja; Sendi, Parham; Perreten, Vincent (29 November 2022). Drug resistance in Trueperellapyogeneshuman and animal clinical isolates in Switzerland (Unpublished). In: 14th GHS Symposium 2022. Studienzentrum Gerzensee (Bern). 29.11. -30.11.2022.
Niederhauser, Christoph; Tinguely, Caroline; Stolz, Martin; Vock, Michael; Amar El Dusouqui, Soraya; Gowland, Peter (2022). Evolution of Blood Safety in Switzerland over the Last 25 years for HIV, HCV, HBV and Treponema pallidum. Viruses, 14(12), pp. 1-17. Molecular Diversity Preservation International MDPI 10.3390/v14122611
Raad, Nicole; Tandon, Disha; Hapfelmeier, Siegfried; Polacek, Norbert (2022). The stationary phase-specific sRNA FimR2 is a multifunctional regulator of bacterial motility, biofilm formation and virulence. Nucleic acids research, 50(20), pp. 11858-11875. Oxford University Press 10.1093/nar/gkac1025
Voellmy, Irene Katharina; Lang, Claudia; Gasser, Michael; Kronenberg, Andreas (2022). Antibiotic resistance surveillance of Klebsiella pneumoniae complex is affected by refined MALDI-TOF identification, Swiss data, 2017 to 2022. Eurosurveillance, 27(45) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2022.27.45.2200104
Gueissaz, Louise; Hauri, Noëmi; Kocher, Juliane; Lavallée, Marc-André; Munday, Manon F; Renggli, Luzia; Béguelin, Charles (2022). [Methicillin-susceptible Staphylococcus aureus bacteraemia]. Revue médicale suisse, 18(799), pp. 1889-1895. Médecine & Hygiène 10.53738/REVMED.2022.18.799.1889
Kraemer, Julia G; Hilty, Markus; Oppliger, Anne (2022). Occupational Exposure to β-d-Glucans, Mould Allergens, Endotoxins and Cultivable Fungi in Pig Farms. Annals of work exposures and health, 66(8), pp. 967-973. Oxford University Press 10.1093/annweh/wxac055
Kelly, Jenna N; Laloli, Laura; V'kovski, Philip; Holwerda, Melle; Portmann, Jasmine; Thiel, Volker; Dijkman, Ronald (2022). Comprehensive single cell analysis of pandemic influenza A virus infection in the human airways uncovers cell-type specific host transcriptional signatures relevant for disease progression and pathogenesis. Frontiers in immunology, 13(978824), p. 978824. Frontiers Research Foundation 10.3389/fimmu.2022.978824
Urwyler, Pascal; Moser, Stephan; Trendelenburg, Marten; Sendi, Parham; Osthoff, Michael (2022). Targeting thromboinflammation in COVID-19 - A narrative review of the potential of C1 inhibitor to prevent disease progression. Molecular immunology, 150, pp. 99-113. Elsevier 10.1016/j.molimm.2022.08.008
Oyewole, Oluwaseun Rume-Abiola; Latzin, Philipp; Brugger, Silvio D; Hilty, Markus (2022). Strain-level resolution and pneumococcal carriage dynamics by single-molecule real-time (SMRT) sequencing of the plyNCR marker: a longitudinal study in Swiss infants. Microbiome, 10(1), p. 152. BioMed Central 10.1186/s40168-022-01344-6
Daouk, Silwan; Heim, Dagmar; Kronenberg, Andreas; Léger, Anaïs; Overesch, Gudrun; Plüss-Suard, Catherine; Schwermer, Heinzpeter (2022). Swiss Antibiotic Resistance Report 2022. Usage of Antibiotics and Occurrence of Antibiotic Resistance in Switzerland. Bern, Switzerland: Swiss Federal Office of Public Health
Sendi, Parham; Razonable, Raymund R; Nelson, Sandra B; Soriano, Alex; Gandhi, Rajesh Tim (2022). First-generation Oral Antivirals Against SARS-CoV-2. Clinical microbiology and infection, 28(9), pp. 1230-1235. Elsevier 10.1016/j.cmi.2022.04.015
Endimiani, Andrea (30 August 2022). Control points to reduce spread of antibiotic resistance: a One-Health approach (Unpublished). In: Annual Congress Swiss Society for Microbiology (SSM). 30.08.22-01.09.22.
Yarahmadov, Tural; Wang, Junhua; Sanches-Taltavull, Daniel; Rojas, Cristian A Alvarez; Brodie, Tess; Büchi, Isabel; Keogh, Adrian; Gottstein, Bruno; Stroka, Deborah; Beldi, Guido (2022). Primary Infection by E. multilocularis Induces Distinct Patterns of Cross Talk between Hepatic Natural Killer T Cells and Regulatory T Cells in Mice. Infection and immunity, 90(8), e0017422. American Society for Microbiology 10.1128/iai.00174-22
Chiffi, Gabriele; Grandgirard, Denis; Stöckli, Sabrina; Valente, Luca G; Adamantidis, Antoine; Leib, Stephen L (2022). Tick-borne encephalitis affects sleep-wake behavior and locomotion in infant rats. Cell & bioscience, 12(1), p. 121. BioMed Central 10.1186/s13578-022-00859-7
Sorgenfrei, Michèle; Hürlimann, Lea M; Remy, Mélissa M; Keller, Peter Michael; Seeger, Markus A (2022). Biomolecules capturing live bacteria from clinical samples. Trends in biochemical sciences, 47(8), pp. 673-688. Elsevier Current Trends 10.1016/j.tibs.2022.03.018
Niederhauser, Christoph; Galel, Susan A (2022). Transfusion-Transmitted Malaria and Mitigation Strategies in Nonendemic Regions. Transfusion medicine and hemotherapy, 49(4), pp. 205-216. Karger 10.1159/000525414
Le, Ngoc Dung; Steinfort, Marel; Grandgirard, Denis; Maleska, Aleksandra; Leppert, David; Kuhle, Jens; Leib, Stephen L (2022). The CCR5 antagonist maraviroc exerts limited neuroprotection without improving neurofunctional outcome in experimental pneumococcal meningitis. Scientific reports, 12(1), p. 12945. Springer Nature 10.1038/s41598-022-17282-0
Friedli, Olivier; Völlmy, Irene; Schrenzel, Jacques; Harbarth, Stephan; Kronenberg, Andreas (2022). Retrospective data analysis for definition of multidrug resistance in gram-negative bacteria - a consensus proposal. Swiss medical weekly, 152(w30195), w30195. EMH Media 10.4414/smw.2022.w30195
Sendi, Parham; Thierstein, Marc; Widmer, Nadja; Babongo Bosombo, Flora; Büchi, Annina Elisabeth; Güntensperger, Dominik; Blum, Manuel Raphael; Baldan, Rossella; Tinguely, Caroline; Gahl, Brigitta; Heg, Dik; Theel, Elitza S.; Berbari, Elie; Endimiani, Andrea; Gowland, Peter; Niederhauser, Christoph (2022). Serosurveillance after a COVID-19 Vaccine Campaign in a Swiss Police Cohort. Immunity, inflammation and disease, 10(7), e640. Wiley 10.1002/iid3.640
Campos-Madueno, Edgar I.; Mauri, Carola; Meroni, Elisa; Porragas Paseiro, Pablo; Consonni, Alessandra; Luzzaro, Francesco; Endimiani, Andrea (2022). Simultaneous gut colonization by Klebsiella grimontii and Escherichia coli co-possessing the blaKPC-3-carrying pQil plasmid. European journal of clinical microbiology & infectious diseases, 41(7), pp. 1087-1091. Springer 10.1007/s10096-022-04462-z
Gultom, Mitra; Kratzel, Annika; Portmann, Jasmine; Stalder, Hanspeter; Chanfon Bätzner, Astrid; Gantenbein, Hans; Gurtner, Corinne; Ebert, Nadine; Gad, Hans Henrik; Hartmann, Rune; Posthaus, Horst; Zanolari, Patrik; Pfaender, Stephanie; Thiel, Volker Earl; Dijkman, Ronald (2022). Establishment of well-differentiated camelid airway cultures to study Middle East respiratory syndrome coronavirus. Scientific reports, 12(1), p. 10340. Springer Nature 10.1038/s41598-022-13777-y
Friedli, Olivier; Gasser, Michael; Cusini, Alexia; Fulchini, Rosamaria; Vuichard-Gysin, Danielle; Halder Tobler, Roswitha; Wassilew, Nasstasja; Plüss-Suard, Catherine; Kronenberg, Andreas (2022). Impact of the COVID-19 Pandemic on Inpatient Antibiotic Consumption in Switzerland. Antibiotics, 11(6) MDPI 10.3390/antibiotics11060792
Salazar-Vizcaya, Luisa; Atkinson, Andrew; Kronenberg, Andreas; Plüss-Suard, Catherine; Kouyos, Roger D; Kachalov, Viacheslav; Troillet, Nicolas; Marschall, Jonas; Sommerstein, Rami (2022). The impact of public health interventions on the future prevalence of ESBL-producing Klebsiella pneumoniae: a population based mathematical modelling study. BMC infectious diseases, 22(1), p. 487. BioMed Central 10.1186/s12879-022-07441-z
Moulin, Estelle; Boillat-Blanco, Noémie; Zanetti, Giorgio; Plüss-Suard, Catherine; de Vallière, Serge; Senn, Laurence (2022). Point prevalence study of antibiotic appropriateness and possibility of early discharge from hospital among patients treated with antibiotics in a Swiss University Hospital. Antimicrobial resistance and infection control, 11(1), p. 66. BioMed Central 10.1186/s13756-022-01104-z
Nguyen, Huyen; Hampel, Benjamin; Nuñez, David Garcia; Battegay, Manuel; Hachfeld, Anna; Bernasconi, Enos; Calmy, Alexandra; Cavassini, Matthias; Vernazza, Pietro; Fellay, Jacques; Rudolph, Hannes; Huber, Michael; Leuzinger, Karoline; Perreau, Matthieu; Scherrer, Alexandra; Ramette, Alban Nicolas; Yerly, Sabine; Günthard, Huldrych F; Kouyos, Roger D and Kusejko, Katharina (2022). Identifying and Characterizing Trans women in the Swiss HIV Cohort Study as an Epidemiologically Distinct Risk Group. Clinical infectious diseases, 74(8), pp. 1468-1475. Oxford University Press 10.1093/cid/ciab628
Kronenberg, Philipp A; Deibel, Ansgar; Gottstein, Bruno; Grimm, Felix; Müllhaupt, Beat; Meyer Zu Schwabedissen, Cordula; Aitbaev, Sezdbek; Omorov, Rakhatbek A; Abdykerimov, Kubanychbek K; Minbaeva, Gulnara; Usubalieva, Jumagul; Siles-Lucas, Mar; Pepe, Paola; Rinaldi, Laura; Spiliotis, Markus; Wang, Junhua; Müller, Norbert; Torgerson, Paul R; Deplazes, Peter (2022). Serological Assays for Alveolar and Cystic Echinococcosis-A Comparative Multi-Test Study in Switzerland and Kyrgyzstan. Pathogens, 11(5) MDPI AG 10.3390/pathogens11050518
Prazak, Josef; Valente, Luca; Iten, Manuela; Federer, Lea; Grandgirard, Denis; Soto, Sara; Resch, Gregory; Leib, Stephen L.; Jakob, Stephan M.; Haenggi, Matthias; Cameron, David R.; Que, Yok-Ai (2022). Benefits of aerosolized phages for the treatment of pneumonia due to methicillin-resistant Staphylococcus aureus (MRSA): an experimental study in rats. The journal of infectious diseases, 225(8), pp. 1452-1459. Oxford University Press 10.1093/infdis/jiab112
Borcard, Loïc; Gempeler, Sonja; Terrazos Miani, Miguel A; Baumann, Christian; Grädel, Carole; Dijkman, Ronald; Suter-Riniker, Franziska; Leib, Stephen L; Bittel, Pascal; Neuenschwander, Stefan; Ramette, Alban (2022). Investigating the Extent of Primer Dropout in SARS-CoV-2 Genome Sequences During the Early Circulation of Delta Variants. Frontiers in Virology, 2 Frontiers 10.3389/fviro.2022.840952
Stader, Felix; Battegay, Manuel; Sendi, Parham; Marzolini, Catia (2022). Physiologically Based Pharmacokinetic Modelling to Investigate the Impact of the Cytokine Storm on CYP3A Drug Pharmacokinetics in COVID-19 Patients. Clinical pharmacology and therapeutics, 111(3), pp. 579-584. Wiley 10.1002/cpt.2402
Purde, Mette‑Triin; Niederer, Rebekka; Wagner, ikolaus B.; Diem, Stefan; Berner, Fiamma; Hasan Ali, Omar; Hillmann, Dorothea; Bergamin, Irina; Joerger, Markus; Risch, Martin; Niederhauser, Christoph; Lenz, Tobias L.; Früh, Martin; Risch, Lorenz; Semela, David; Flatz, Lukas (2022). Presence of autoantibodies in serum does not impact the occurrence of immune checkpoint inhibitor-induced hepatitis in a prospective cohort of cancer patients. Journal of cancer research and clinical oncology, 148(3), pp. 647-656. Springer 10.1007/s00432-021-03870-6
Campos-Madueno, Edgar I.; Moser, Aline I.; Jost, Géraldine; Maffioli, Carola; Bodmer, Thomas; Perreten, Vincent; Endimiani, Andrea (2022). Carbapenemase-producing Klebsiella pneumoniae strains in Switzerland: Human and non-human settings may share high-risk clones. Journal of global antimicrobial resistance, 28, pp. 206-215. Elsevier 10.1016/j.jgar.2022.01.016
Renggli, L.; Gasser, M.; Plüss-Suard, C.; Harbarth, S.; Kronenberg, A. (2022). Temporal and structural patterns of extended-spectrum cephalosporin-resistant Klebsiella pneumoniae incidence in Swiss hospitals. Journal of hospital infection, 120, pp. 36-42. Elsevier 10.1016/j.jhin.2021.11.006
Donà, Valentina; Ramette, Alban; Perreten, Vincent (2022). Comparative genomics of 26 complete circular genomes of 18 different serotypes of Actinobacillus pleuropneumoniae. Microbial genomics, 8(2), 000776. Microbiology Society 10.1099/mgen.0.000776
Wegner, Fanny; Roloff, Tim; Huber, Michael; Cordey, Samuel; Ramette, Alban; Gerth, Yannick; Bertelli, Claire; Stange, Madlen; Seth-Smith, Helena M B; Mari, Alfredo; Leuzinger, Karoline; Cerutti, Lorenzo; Harshman, Keith; Xenarios, Ioannis; Le Mercier, Philippe; Bittel, Pascal; Neuenschwander, Stefan; Opota, Onya; Fuchs, Jonas; Panning, Marcus; ... (2022). External quality assessment of SARS-CoV-2-sequencing: An ESGMD-SSM pilot trial across 15 European laboratories. Journal of clinical microbiology, 60(1), e0169821. American Society for Microbiology 10.1128/JCM.01698-21
Duran Ramirez, Jessy J; Ballouz, Tala; Nguyen, Huyen; Kusejko, Katharina; Chaudron, Sandra E; Huber, Michael; Hirsch, Hans H; Perreau, Matthieu; Ramette, Alban; Yerly, Sabine; Cavassini, Matthias; Stöckle, Marcel; Furrer, Hansjakob; Vernazza, Pietro; Bernasconi, Enos; Günthard, Huldrych F; Kouyos, Roger D (2022). Increasing Frequency and Transmission of HIV-1 Non-B Subtypes among Men Who Have Sex with Men in the Swiss HIV Cohort Study. The journal of infectious diseases, 225(2), pp. 306-316. Oxford University Press 10.1093/infdis/jiab360
Ramírez Mena, Adrià; Tine, Judicaël M; Fortes, Louise; Ndiaye, Ousseynou; Ka, Daye; Ngom, Ndeye Fatou; Ramette, Alban Nicolas; Bittel, Pascal; Seydi, Moussa; Wandeler, Gilles (2022). Hepatitis B screening practices and viral control among persons living with HIV in urban Senegal. Journal of viral hepatitis, 29(1), pp. 60-68. Blackwell Science 10.1111/jvh.13615
Ben Salah, Eya; Barrera, Coralie; Sakly, Wahiba; Mosbahi, Sana; Balliau, Thierry; Franche, Nathalie; Gottstein, Bruno; Ben Youssef, Sabrine; Mekki, Mongi; Babba, Hamouda; Millon, Laurence (2022). Novel biomarkers for the early prediction of pediatric cystic echinococcosis post-surgical outcomes. Journal of infection, 84(1), pp. 87-93. Elsevier 10.1016/j.jinf.2021.09.023
Weingartner, Michael; Stücheli, Simon; Jebbawi, Fadi; Gottstein, Bruno; Beldi, Guido; Lundström-Stadelmann, Britta; Wang, Junhua; Odermatt, Alex (2022). Albendazole reduces hepatic inflammation and endoplasmic reticulum-stress in a mouse model of chronic Echinococcus multilocularis infection. PLoS neglected tropical diseases, 16(1), e0009192. Public Library of Science 10.1371/journal.pntd.0009192
Chiffi, Gabriele; Grandgirard, Denis; Sendi, Parham; Dietmann, Anelia; Bassetti, Claudio L. A.; Leib, Stephen (2022). Sleep-Wake and Circadian Disorders after Tick-Borne Encephalitis. Microorganisms, 10(2), p. 304. MDPI 10.3390/microorganisms10020304
Hirzel, Cédric; Grandgirard, Denis; Surial, Bernard; Wider, Manon F.; Leppert, David; Kuhle, Jens; Walti, Laura N.; Schefold, Joerg C.; Spinetti, Thibaud; Suter-Riniker, Franziska; Dijkman, Ronald; Leib, Stephen L (2022). Neuro-axonal injury in COVID-19: the role of systemic inflammation and SARS-CoV-2 specific immune response. Therapeutic advances in neurological disorders, 15, p. 17562864221080528. Sage 10.1177/17562864221080528
Valente, Luca G; Le, Ngoc Dung; Pitton, Melissa; Chiffi, Gabriele; Grandgirard, Denis; Jakob, Stephan M; Cameron, David R; Resch, Grégory; Que, Yok-Ai; Leib, Stephen L (2022). Efficacy assessment of a novel endolysin PlyAZ3aT for the treatment of ceftriaxone-resistant pneumococcal meningitis in an infant rat model. PLoS ONE, 17(4), e0266928. Public Library of Science 10.1371/journal.pone.0266928
Laloli, Laura; Licheri, Manon Flore; Probst, Lukas; Licheri, Matthias; Gultom, Mitra; Holwerda, Melle; V'kovski, Philip; Dijkman, Ronald (2022). Time-resolved characterization of the innate immune response in the respiratory epithelium of human, porcine, and bovine during influenza virus infection. Frontiers in immunology, 13, p. 970325. Frontiers Research Foundation 10.3389/fimmu.2022.970325
Sendi, Parham; Ferry, Tristan (2022). Lysins - a new armamentarium for the treatment of bone and joint infections? Journal of bone and joint infection, 7(5), pp. 187-189. Copernicus Publications 10.5194/jbji-7-187-2022
Sewing, Lilian; Meier, Christian; Sendi, Parham; Christ, Emanuel (2022). Glukokortikoidassoziierte Nebenwirkungen - Prävention und Management. Primary and Hospital Care, 22(11) EMH Swiss Medical Publishers Ltd. 10.4414/phc-f.2022.10495
Ulrich, Lorenz; Halwe, Nico Joel; Taddeo, Adriano; Ebert, Nadine; Schön, Jacob; Devisme, Christelle; Trüeb, Bettina Salome; Hoffmann, Bernd; Wider, Manon; Fan, Xiaoyu; Bekliz, Meriem; Essaidi-Laziosi, Manel; Schmidt, Marie Luisa; Niemeyer, Daniela; Corman, Victor Max; Kraft, Anna; Godel, Aurélie; Laloli, Laura; Kelly, Jenna N; Calderon, Brenda M; ... (2022). Enhanced fitness of SARS-CoV-2 variant of concern Alpha but not Beta. Nature, 602(7896), pp. 307-313. Springer Nature 10.1038/s41586-021-04342-0
Kratzel, Annika; Kelly, Jenna N; V'kovski, Philip; Portmann, Jasmine; Brüggemann, Yannick; Todt, Daniel; Ebert, Nadine; Shrestha, Neeta; Plattet, Philippe; Staab-Weijnitz, Claudia A; von Brunn, Albrecht; Steinmann, Eike; Dijkman, Ronald; Zimmer, Gert; Pfaender, Stephanie; Thiel, Volker (2021). A genome-wide CRISPR screen identifies interactors of the autophagy pathway as conserved coronavirus targets. PLoS biology, 19(12), e3001490. Public Library of Science 10.1371/journal.pbio.3001490
Russell, Gabriel A; Peng, Garrie; Faubert, Cynthia; Verdu, Elena F; Hapfelmeier, Siegfried; King, Irah L (2021). A protocol for generating germ-free Heligmosomoides polygyrus bakeri larvae for gnotobiotic helminth infection studies. STAR protocols, 2(4), p. 100946. Elsevier 10.1016/j.xpro.2021.100946
Tabata, Keisuke; Prasad, Vibhu; Paul, David; Lee, Ji-Young; Pham, Minh-Tu; Twu, Woan-Ing; Neufeldt, Christopher J; Cortese, Mirko; Cerikan, Berati; Stahl, Yannick; Joecks, Sebastian; Tran, Cong Si; Lüchtenborg, Christian; V'kovski, Philip; Hörmann, Katrin; Müller, André C; Zitzmann, Carolin; Haselmann, Uta; Beneke, Jürgen; Kaderali, Lars; ... (2021). Convergent use of phosphatidic acid for hepatitis C virus and SARS-CoV-2 replication organelle formation. Nature Communications, 12(1), p. 7276. Springer Nature 10.1038/s41467-021-27511-1
Ungureanu, Anamaria; van der Meer, Julia; Bicvic, Antonela; Abbuehl, Lena; Chiffi, Gabriele; Jaques, Léonore; Suter-Riniker, Franziska; Leib, Stephen L.; Bassetti, Claudio L.A.; Dietmann, Anelia (2021). Meningitis, meningoencephalitis and encephalitis in Bern: an observational study of 258 patients. BMC neurology, 21(1), p. 474. BioMed Central 10.1186/s12883-021-02502-3
Kaiser-Thom, Sarah; Hilty, Markus; Axiak, Shannon; Gerber, Vinzenz (2021). The skin microbiota in equine pastern dermatitis: a case-control study of horses in Switzerland. Veterinary dermatology, 32(6), 646-e172. Wiley 10.1111/vde.12955
Riester, Elena; Majchrzak, Mario; Mühlbacher, Annelies; Tinguely, Caroline; Findeisen, Peter; Kolja Hegel, Johannes; Laimighofer, Michael; Rank, Christopher M.; Schönfeld, Kathrin; Langen, Florina; Niederhauser, Christoph (2021). Multicentre Performance Evaluation of the Elecsys Anti-SARS-CoV-2 Immunoassay as an Aid in Determining Previous Exposure to SARS-CoV-2. Infectious disease and therapy, 10(4), pp. 2381-2397. Springer 10.1007/s40121-021-00504-9
Dazio, Valentina; Nigg, Aurélien; Schmidt, Janne S; Brilhante, Michael; Campos-Madueno, Edgar I.; Mauri, Nico; Kuster, Stefan P; Gobeli Brawand, Stefanie; Willi, Barbara; Endimiani, Andrea; Perreten, Vincent; Schuller, Simone (2021). Duration of carriage of multidrug-resistant bacteria in dogs and cats in veterinary care and co-carriage with their owners. One health, 13(100322), p. 100322. Elsevier 10.1016/j.onehlt.2021.100322
Moser, Aline I.; Campos-Madueno, Edgar I.; Sendi, Parham; Perreten, Vincent; Keller, Peter M.; Ramette, Alban; Endimiani, Andrea (2021). Repatriation of a patient with COVID-19 contributed to the importation of an emerging carbapenemase producer. Journal of global antimicrobial resistance, 27, pp. 267-272. Elsevier 10.1016/j.jgar.2021.10.012
Casanova, Carlo; Küffer, Marianne; Leib, Stephen L.; Hilty, Markus (2021). Re-emergence of invasive pneumococcal disease (IPD) and increase of serotype 23B after easing of COVID-19 measures, Switzerland, 2021. Emerging microbes & infections, 10(1), pp. 2202-2204. Taylor & Francis 10.1080/22221751.2021.2000892
Gisler, Amanda; Korten, Insa; de Hoogh, Kees; Vienneau, Danielle; Frey, Urs; Decrue, Fabienne; Gorlanova, Olga; Soti, Andras; Hilty, Markus; Latzin, Philipp; Usemann, Jakob (2021). Associations of air pollution and greenness with the nasal microbiota of healthy infants: A longitudinal study. Environmental research, 202, p. 111633. Elsevier 10.1016/j.envres.2021.111633
Riester, Elena; Findeisen, Peter; Hegel, Kolja; Kabesch, Michael; Ambrosch, Andreas; Rank, Christopher M.; Pessl, Florina; Laengin, Tina; Niederhauser, Christoph (2021). Performance evaluation of the Roche Elecsys Anti-SARS-CoV-2 S immunoassay. Journal of virological methods, 297, p. 114271. Elsevier 10.1016/j.jviromet.2021.114271
Renggli, L.; Gasser, M.; Plüss-Suard, C.; Kronenberg, A. (2021). Consumption of anti-meticillin-resistant Staphylococcus aureus antibiotics in Swiss hospitals is associated with antibiotic stewardship measures. The journal of hospital infection, 117, pp. 165-171. Elsevier 10.1016/j.jhin.2021.08.019
Müller, Seraina L C; Morgenstern, Mario; Kuehl, Richard; Muri, Thaddaeus; Kalbermatten, Daniel F; Clauss, Martin; Schaefer, Dirk J; Sendi, Parham; Osinga, Rik (2021). Soft-tissue reconstruction in lower-leg fracture-related infections: An orthoplastic outcome and risk factor analysis. Injury - international journal of the care of the injured, 52(11), pp. 3489-3497. Elsevier 10.1016/j.injury.2021.07.022
Barnsteiner, Stefanie; Baty, Florent; Albrich, Werner C; Babouee Flury, Baharak; Gasser, Michael; Plüss-Suard, Catherine; Schlegel, Matthias; Kronenberg, Andreas; Kohler, Philipp (2021). Antimicrobial resistance and antibiotic consumption in intensive care units, Switzerland, 2009 to 2018. Eurosurveillance, 26(46) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2021.26.46.2001537
Peker, Nilay; Schuele, Leonard; Kok, Nienke; Terrazos, Miguel; Neuenschwander, Stefan M.; de Beer, Jessica; Akkerman, Onno; Peter, Silke; Ramette, Alban; Merker, Matthias; Niemann, Stefan; Couto, Natacha; Sinha, Bhanu; Rossen, John Wa (2021). Evaluation of whole-genome sequence data analysis approaches for short- and long-read sequencing of Mycobacterium tuberculosis. Microbial genomics, 7(11) Microbiology Society 10.1099/mgen.0.000695
Sendi, Parham; Baldan, Rossella; Thierstein, Marc; Widmer, Nadja; Gowland, Peter; Gahl, Brigitta; Büchi, Annina Elisabeth; Güntensperger, Dominik; Wider, Manon; Blum, Manuel Raphael; Tinguely, Caroline; Maillat, Cédric; Theel, Elitza S; Berbari, Elie; Dijkman, Ronald; Niederhauser, Christoph (2021). A multidimensional cross-sectional analysis of COVID-19 seroprevalence among a police officer cohort: The PoliCOV-19 study. Open Forum Infectious Diseases, 8(12), ofab524. Oxford University Press 10.1093/ofid/ofab524
Herzig, Mandy; Maksimov, Pavlo; Staubach, Christoph; Romig, Thomas; Knapp, Jenny; Gottstein, Bruno; Conraths, Franz J (2021). Red foxes harbor two genetically distinct, spatially separated Echinococcus multilocularis clusters in Brandenburg, Germany. Parasites & Vectors, 14(1), p. 535. BioMed Central 10.1186/s13071-021-05038-0
Gottstein, Bruno; Deplazes, Peter (2021). Alveolar echinococcosis: what triggers emergence in North America, Central Europe and Asia? Current opinion in infectious diseases, 34(5), pp. 440-446. Wolters Kluwer Health 10.1097/QCO.0000000000000765
Müller, Annelies; Schramm, Diana B; Kleynhans, Jackie; de Gouveia, Linda; Meiring, Susan; Ramette, Alban; von Gottberg, Anne; Hathaway, Lucy Jane (2021). Cytokine response in cerebrospinal fluid of meningitis patients and outcome associated with pneumococcal serotype. Scientific reports, 11(1), p. 19920. Springer Nature 10.1038/s41598-021-99190-3
Diem, Stefan; Gottstein, Bruno; Beldi, Guido; Semmo, Nasser; Diem, Lara F. (2021). Accelerated Course of Alveolar Echinococcosis After Treatment With Steroids in a Patient With Autoimmune Encephalitis. Cureus, 13(10), e18831. Cureus, Inc. 10.7759/cureus.18831
Schären, Olivier P.; Hapfelmeier, Siegfried (2021). Robust microbe immune recognition in the intestinal mucosa. Genes and immunity, 22(5-6), pp. 268-275. Nature Publishing Group 10.1038/s41435-021-00131-x
Valente, Luca G.; Federer, Lea; Iten, Manuela; Grandgirard, Denis; Leib, Stephen L.; Jakob, Stephan M.; Haenggi, Matthias; Cameron, David R.; Que, Yok-Ai; Prazak, Josef (2021). Searching for synergy: combining systemic daptomycin treatment with localised phage therapy for the treatment of experimental pneumonia due to MRSA. BMC research notes, 14(1), p. 381. Biomed Central 10.1186/s13104-021-05796-1
Schroeder, Simon; Mache, Christin; Kleine-Weber, Hannah; Corman, Victor M; Muth, Doreen; Richter, Anja; Fatykhova, Diana; Memish, Ziad A; Stanifer, Megan L; Boulant, Steeve; Gultom, Mitra; Dijkman, Ronald; Eggeling, Stephan; Hocke, Andreas; Hippenstiel, Stefan; Thiel, Volker; Pöhlmann, Stefan; Wolff, Thorsten; Müller, Marcel A and Drosten, Christian (2021). Functional comparison of MERS-coronavirus lineages reveals increased replicative fitness of the recombinant lineage 5. Nature Communications, 12(1), p. 5324. Springer Nature 10.1038/s41467-021-25519-1
Moor, Julia; Aebi, Susanne; Rickli, Susanne; Mostacci, Nadezda; Overesch, Gudrun; Oppliger, Anne; Hilty, Markus (2021). Dynamics of extended-spectrum cephalosporin-resistant Escherichia coli in pig farms: A longitudinal study. International journal of antimicrobial agents, 58(3), p. 106382. Elsevier 10.1016/j.ijantimicag.2021.106382
Zürcher, Kathrin; Mugglin, Catrina; Suter-Riniker, Franziska; Keller, Peter M.; Egger, Matthias; Müller, Sandro; Fluri, Michael; Hoffmann, Matthias; Fenner, Lukas (2021). Seroprevalence of SARS-CoV-2 in healthcare workers from outpatient facilities and retirement or nursing homes in a Swiss canton. Swiss medical weekly, 151(33-34), w30021. EMH Schweizerischer Ärzteverlag 10.4414/SMW.2021.w30021
Sommerstein, Rami; Damonti, Lauro; Marschall, Jonas; Harbarth, Stephan; Gasser, Michael; Kronenberg, Andreas; Buetti, Niccolò (2021). Distribution of pathogens and antimicrobial resistance in ICU-bloodstream infections during hospitalization: a nationwide surveillance study. Scientific reports, 11(1), p. 16876. Springer Nature 10.1038/s41598-021-95873-z
Campos-Madueno, Edgar I.; Moser, Aline I.; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Exploring the global spread of Klebsiella grimontii isolates possessing blaVIM-1 and mcr-9. Antimicrobial agents and chemotherapy, 65(9), e0072421. American Society for Microbiology 10.1128/AAC.00724-21
Kraemer, Julia G.; Aebi, Suzanne; Hilty, Markus; Oppliger, Anne (2021). Nasal microbiota composition dynamics after occupational change in animal farmers suggest major shifts. Science of the total environment, 782(146842), p. 146842. Elsevier 10.1016/j.scitotenv.2021.146842
Jebbawi, Fadi; Bellanger, Anne-Pauline; Lundström-Stadelmann, Britta; Rufener, Reto; Dosch, Michel; Goepfert, Christine; Gottstein, Bruno; Millon, Laurence; Grandgirard, Denis; Leib, Stephen L.; Beldi, Guido; Wang, Junhua (2021). Innate and adaptive immune responses following PD-L1 blockade in treating chronic murine alveolar echinococcosis. Parasite immunology, 43(8), e12834. Wiley 10.1111/pim.12834
Schlaeppi, Klaus; Gross, Josef J.; Hapfelmeier, Siegfried; Erb, Matthias (2021). Plant chemistry and food web health. New Phytologist, 231(3), pp. 957-962. Wiley 10.1111/nph.17385
Moser, Aline; Campos-Madueno, Edgar Igor; Keller, Peter Michael; Endimiani, Andrea (2021). Complete Genome Sequence of a Third- and Fourth-Generation Cephalosporin-Resistant Comamonas kerstersii Isolate. Microbiology resource announcements, 10(28), e0039121. American Society for Microbiology 10.1128/MRA.00391-21
Gómez, Cristina; Jebbawi, Fadi; Weingartner, Michael; Wang, Junhua; Stücheli, Simon; Stieger, Bruno; Gottstein, Bruno; Beldi, Guido; Lundström Stadelmann, Britta; Odermatt, Alex (2021). Impact on Bile Acid Concentrations by Alveolar Echinococcosis and Treatment with Albendazole in Mice. Metabolites, 11(7) MDPI 10.3390/metabo11070442
Gultom, Mitra; Licheri, Matthias; Laloli, Laura; Wider, Manon; Strässle, Marina; V'kovski, Philip; Steiner, Silvio; Kratzel, Annika; Tran, Thi Nhu Thao; Probst, Lukas; Stalder, Hanspeter; Portmann, Jasmine; Holwerda, Melle; Ebert, Nadine; Stokar-Regenscheit, Nadine; Gurtner, Corinne; Zanolari, Patrik; Posthaus, Horst; Schuller, Simone; Vicente-Santos, Amanda; ... (2021). Susceptibility of Well-Differentiated Airway Epithelial Cell Cultures from Domestic and Wild Animals to Severe Acute Respiratory Syndrome Coronavirus 2. Emerging infectious diseases, 27(7), pp. 1811-1820. Centers for Disease Control and Prevention 10.3201/eid2707.204660
Studer, Eveline; Schönecker, Lutz; Meylan, Mireille; Stucki, Dimitri; Dijkman, Ronald; Holwerda, Melle; Glaus, Anna; Becker, Jens (2021). Prevalence of BRD-Related Viral Pathogens in the Upper Respiratory Tract of Swiss Veal Calves. Animals, 11(7) MDPI 10.3390/ani11071940
Moser, Aline I.; Viaggi, Valentina; Mauri, Carola; Carattoli, Alessandra; Luzzaro, Francesco; Endimiani, Andrea (2021). An XDR Proteus vulgaris isolate hosting a novel blaNDM-1- and armA-carrying plasmid. The journal of antimicrobial chemotherapy, 76(7), pp. 1938-1941. Oxford University Press 10.1093/jac/dkab111
Moser, Stephan; Rehm, Sophia; Guertler, Nicolas; Hinic, Vladimira; Dräger, Sarah; Bassetti, Stefano; Rentsch, Katharina M; Sendi, Parham; Osthoff, Michael (2021). Probability of pharmacological target attainment with flucloxacillin in Staphylococcus aureus bloodstream infection: a prospective cohort study of unbound plasma and individual MICs. The journal of antimicrobial chemotherapy, 76(7), pp. 1845-1854. Oxford University Press 10.1093/jac/dkab089
Bellanger, Anne-Pauline; Wang, Junhua; Gbaguidi-Haore, Houssein; Barrera, Coralie; Bresson-Hadni, Solange; Zlobec, Inti; Lachenmayer, Anja; Richou, Carine; Turco, Celia; Gottstein, Bruno; Millon, Laurence; Beldi, Guido (2021). Investigating new serological and tissue markers for the follow-up of patients operated for alveolar echinococcosis. Parasite immunology, 43(6), e12827. Wiley 10.1111/pim.12827
Campos-Madueno, Edgar I.; Sigrist, Thomas; Flückiger, Ursula M.; Risch, Lorenz; Bodmer, Thomas; Endimiani, Andrea (2021). First report of a blaVIM-1 metallo-β-lactamase-possessing Klebsiella michiganensis. Journal of global antimicrobial resistance, 25, pp. 310-314. Elsevier 10.1016/j.jgar.2021.03.027
Benazzouz, Sara; Amri, Manel; Wang, Junhua; Bouaziz, Samia; Ameur, Fahima; Djebbara, Sara; Achour, Karima; Gottstein, Bruno; Touil-Boukoffa, Chafia (2021). In vitro immunoregulatory activity and anti-inflammatory effect of Echinococcus granulosus laminated layer. Acta tropica, 218, p. 105886. Elsevier 10.1016/j.actatropica.2021.105886
Brueggemann, Angela B; Jansen van Rensburg, Melissa J; Shaw, David; McCarthy, Noel D; Jolley, Keith A; Maiden, Martin C J; van der Linden, Mark P G; Amin-Chowdhury, Zahin; Bennett, Désirée E; Borrow, Ray; Brandileone, Maria-Cristina C; Broughton, Karen; Campbell, Ruth; Cao, Bin; Casanova, Carlo; Choi, Eun Hwa; Chu, Yiu Wai; Clark, Stephen A; Claus, Heike; Coelho, Juliana; ... (2021). Changes in the incidence of invasive disease due to Streptococcus pneumoniae, Haemophilus influenzae, and Neisseria meningitidis during the COVID-19 pandemic in 26 countries and territories in the Invasive Respiratory Infection Surveillance Initiative: a prospective analysis of surveillance data. The Lancet. Digital health, 3(6), e360-e370. Elsevier 10.1016/S2589-7500(21)00077-7
Gottstein, Bruno; Deplazes, Peter; Aspöck, Horst (2021). On the 90th birthday of Prof. Dr. Dr. h.c. med. vet. Johannes Eckert. Parasitology research, 120(6), pp. 1931-1933. Springer-Verlag 10.1007/s00436-021-07181-0
Germic, Nina; Hosseini, Aref; Stojkov, Darko; Oberson, Kevin; Claus, Meike; Benarafa, Charaf; Calzavarini, Sara; Angelillo-Scherrer, Anne; Arnold, Isabelle C; Müller, Anne; Riether, Carsten; Yousefi, Shida; Simon, Hans-Uwe (2021). ATG5 promotes eosinopoiesis, but inhibits eosinophil effector functions. Blood, 137(21), pp. 2958-2969. American Society of Hematology 10.1182/blood.2020010208
Niederhauser, Christoph; Tinguely, Caroline; Dreier, Jens; Vollmer, Tanja; Marti, Hans Peter; Nickel, Beatrice; Klemens, Julia Maria; Warnecke, Jens Miguel; Gowland, Peter (2021). Comparison of a New IgG-EIA for the Detection of Anti-Plasmodium Antibodies with Two Currently Used Assays. Transfusion medicine and hemotherapy, 48(5), pp. 265-271. Karger 10.1159/000515842
Mari, Alfredo; Roloff, Tim; Stange, Madlen; Søgaard, Kirstine K; Asllanaj, Erblin; Tauriello, Gerardo; Alexander, Leila Tamara; Schweitzer, Michael; Leuzinger, Karoline; Gensch, Alexander; Martinez, Aurélien E; Bielicki, Julia; Pargger, Hans; Siegemund, Martin; Nickel, Christian H; Bingisser, Roland; Osthoff, Michael; Bassetti, Stefano; Sendi, Parham; Battegay, Manuel; ... (2021). Global Genomic Analysis of SARS-CoV-2 RNA Dependent RNA Polymerase Evolution and Antiviral Drug Resistance. Microorganisms, 9(5) MDPI 10.3390/microorganisms9051094
Oyewole, Oluwaseun Rume-Abiola; Lang, Phung; Albrich, Werner C.; Wissel, Kerstin; Leib, Stephen L.; Casanova, Carlo; Hilty, Markus (2021). The Impact of Pneumococcal Conjugate Vaccine (PCV) Coverage Heterogeneities on the Changing Epidemiology of Invasive Pneumococcal Disease in Switzerland, 2005–2019. Microorganisms, 9(5) MDPI 10.3390/microorganisms9051078
Baldan, Rossella; Droz, Sara; Casanova, Carlo; Knabben, Laura; Huang, Dorothy J; Brülisauer, Christine; Kind, André B; Krause, Elke; Mauerer, Stefanie; Spellerberg, Barbara; Sendi, Parham (2021). Group B streptococcal colonization in elderly women. BMC infectious diseases, 21(1), p. 408. BioMed Central 10.1186/s12879-021-06102-x
Almaw, Gizat; Abie Mekonnen, Getnet; Mihret, Adane; Aseffa, Abraham; Taye, Hawult; Conlan, Andrew J. K.; Gumi, Balako; Zewude, Aboma; Aliy, Abde; Tamiru, Mekdes; Olani, Abebe; Lakew, Matios; Sombo, Melaku; Gebre, Solomon; Diguimbaye, Colette; Hilty, Markus; Fané, Adama; Müller, Borna; Hewinson, R. Glyn; Ellis, Richard J.; ... (2021). Population structure and transmission of Mycobacterium bovis in Ethiopia. Microbial genomics, 7(5) Microbiology Society 10.1099/mgen.0.000539
Knapp, Jenny; Meyer, Anika; Courquet, Sandra; Millon, Laurence; Raoul, Francis; Gottstein, Bruno; Frey, Caroline F. (2021). Echinococcus multilocularis genetic diversity in Swiss domestic pigs assessed by EmsB microsatellite analyzes. Veterinary parasitology, 293, p. 109429. Elsevier 10.1016/j.vetpar.2021.109429
Polish, Louis B; Pritt, Bobbi; Barth, Thomas F E; Gottstein, Bruno; O'Connell, Elise M; Gibson, Pamela C (2021). First European Haplotype of Echinococcus multilocularis Identified in the United States: An Emerging Disease? Clinical infectious diseases, 72(7), pp. 1117-1123. Oxford University Press 10.1093/cid/ciaa245
Knoll, Maria Deloria; Bennett, Julia C.; Garcia Quesada, Maria; Kagucia, Eunice W.; Peterson, Meagan E.; Feikin, Daniel R.; Cohen, Adam L.; Hetrich, Marissa K.; Yang, Yangyupei; Sinkevitch, Jenna N.; Ampofo, Krow; Aukes, Laurie; Bacci, Sabrina; Bigogo, Godfrey; Brandileone, Maria-Cristina C.; Bruce, Michael G.; Camilli, Romina; Castilla, Jesús; Chan, Guanhao; Chanto Chacón, Grettel; ... (2021). Global Landscape Review of Serotype-Specific Invasive Pneumococcal Disease Surveillance among Countries Using PCV10/13: The Pneumococcal Serotype Replacement and Distribution Estimation (PSERENADE) Project. Microorganisms, 9(4) MDPI 10.3390/microorganisms9040742
Garcia Quesada, Maria; Yang, Yangyupei; Bennett, Julia C.; Hayford, Kyla; Zeger, Scott L.; Feikin, Daniel R.; Peterson, Meagan E.; Cohen, Adam L.; Almeida, Samanta C. G.; Ampofo, Krow; Ang, Michelle; Bar-Zeev, Naor; Bruce, Michael G.; Camilli, Romina; Chanto Chacón, Grettel; Ciruela, Pilar; Cohen, Cheryl; Corcoran, Mary; Dagan, Ron; De Wals, Philippe; ... (2021). Serotype Distribution of Remaining Pneumococcal Meningitis in the Mature PCV10/13 Period: Findings from the PSERENADE Project. Microorganisms, 9(4) MDPI 10.3390/microorganisms9040738
Sangiorgio, Daphne B.; Hilty, Markus; Kaiser-Thom, Sarah; Epper, Pascale G.; Ramseyer, Alessandra A.; Overesch, Gudrun; Gerber, Vinzenz M. (2021). The influence of clinical severity and topical antimicrobial treatment on bacteriological culture and the microbiota of equine pastern dermatitis. Veterinary dermatology, 32(2), 173-e41. Wiley 10.1111/vde.12912
Ramette, Alban; Gasser, Michael; Nordmann, Patrice; Zbinden, Reinhard; Schrenzel, Jacques; Perisa, Damir; Kronenberg, Andreas (2021). Temporal and regional incidence of carbapenemase-producing Enterobacterales, Switzerland, 2013 to 2018. Eurosurveillance, 26(15) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2021.26.15.1900760
Tamarozzi, Francesca; Silva, Ronaldo; Fittipaldo, Veronica Andrea; Buonfrate, Dora; Gottstein, Bruno; Siles-Lucas, Mar (2021). Serology for the diagnosis of human hepatic cystic echinococcosis and its relation with cyst staging: A systematic review of the literature with meta-analysis. PLoS neglected tropical diseases, 15(4), e0009370. Public Library of Science 10.1371/journal.pntd.0009370
Salah, Eya Ben; Barrera, Coralie; Mosbahi, Sana; Gottstein, Bruno; Siles-Lucas, Mar; Belhassen, Samia; Nouri, Abdellatif; Babba, Hamouda; Millon, Laurence; Sakly, Wahiba (2021). Promising proteins detected by Western blot from Echinococcus granulosus protoscoleces for predicting early post-surgical outcomes in CE-affected Tunisian children. Parasites & Vectors, 14(1), p. 180. BioMed Central 10.1186/s13071-021-04679-5
Bennett, Julia C.; Hetrich, Marissa K.; Garcia Quesada, Maria; Sinkevitch, Jenna N.; Knoll, Maria Deloria; Feikin, Daniel R.; Zeger, Scott L.; Kagucia, Eunice W.; Cohen, Adam L.; Ampofo, Krow; Brandileone, Maria-Cristina C.; Bruden, Dana; Camilli, Romina; Castilla, Jesús; Chan, Guanhao; Cook, Heather; Cornick, Jennifer E.; Dagan, Ron; Dalby, Tine; Danis, Kostas; ... (2021). Changes in Invasive Pneumococcal Disease Caused by Streptococcus pneumoniae Serotype 1 Following Introduction of PCV10 and PCV13: Findings from the PSERENADE Project. Microorganisms, 9(4) MDPI 10.3390/microorganisms9040696
Houston, Stan; Belga, Sara; Buttenschoen, Klaus; Cooper, Ryan; Girgis, Safwat; Gottstein, Bruno; Low, Gavin; Massolo, Alessandro; MacDonald, Clayton; Müller, Norbert; Preiksaitis, Jutta; Sarlieve, Philippe; Vaughan, Steven; Kowalewska-Grochowska, Kinga (2021). Epidemiological and Clinical Characteristics of Alveolar Echinococcosis: An Emerging Infectious Disease in Alberta, Canada. The American Journal of Tropical Medicine and Hygiene, 104(5), pp. 1863-1869. American Society of Tropical Medicine and Hygiene 10.4269/ajtmh.20-1577
Schriber, Martina; Sendi, Parham; Greutmann, Matthias; Bornstein, Michael M (2021). Dental Medicine and Infective Endocarditis: Current guidelines for antibiotic prophylaxis and recommendations for daily clinical practice. Swiss dental journal, 131(3), pp. 245-251. Schweizerische Zahnärzte-Gesellschaft SSO
Kümin, Daniel; Gsell Albert, Monika; Weber, Benjamin; Summermatter, Katharina (2021). The Hitchhiker's Guide to Hydrogen Peroxide Fumigation, Part 2: Verifying and Validating Hydrogen Peroxide Fumigation Cycles. Applied Biosafety, 26(1), pp. 42-51. Mary Ann Liebert 10.1089/apb.21.921099
Grüter, Basil E.; Wanderer, Stefan; Strange, Fabio; Boillat, Gwendoline; Täschler, Dominik; Rey, Jeannine; Croci, Davide M; Grandgirard, Denis; Leib, Stephen; von Gunten, Michael; Di Santo, Stefano; Widmer, Hans Rudolf; Remonda, Luca; Andereggen, Lukas; Nevzati, Edin; Coluccia, Daniel; Fandino, Javier; Marbacher, Serge (2021). Patterns of Neointima Formation After Coil or Stent Treatment in a Rat Saccular Sidewall Aneurysm Model. Stroke, 52(3), pp. 1043-1052. American Heart Association 10.1161/STROKEAHA.120.032255
Holwerda, Melle; Laloli, Laura; Wider, Manon; Schönecker, Lutz; Becker, Jens; Meylan, Mireille; Dijkman, Ronald (2021). Establishment of a Reverse Genetic System from a Bovine Derived Influenza D Virus Isolate. Viruses, 13(3) Molecular Diversity Preservation International MDPI 10.3390/v13030502
V'kovski, Philip; Gultom, Mitra; Kelly, Jenna N.; Steiner, Silvio; Russeil, Julie; Mangeat, Bastien; Cora, Elisa; Pezoldt, Joern; Holwerda, Melle; Kratzel, Annika; Laloli, Laura; Wider, Manon; Portmann, Jasmine; Tran, Thao; Ebert, Nadine; Stalder, Hanspeter; Hartmann, Rune; Gardeux, Vincent; Alpern, Daniel; Deplancke, Bart; ... (2021). Disparate temperature-dependent virus-host dynamics for SARS-CoV-2 and SARS-CoV in the human respiratory epithelium. PLoS biology, 19(3), e3001158. Public Library of Science 10.1371/journal.pbio.3001158
Dazio, Valentina; Nigg, Aurélien; Schmidt, Janne S; Brilhante, Michael; Mauri, Nico; Kuster, Stephan P; Gobeli Brawand, Stefanie; Schüpbach-Regula, Gertraud; Willi, Barbara; Endimiani, Andrea; Perreten, Vincent; Schuller, Simone (2021). Acquisition and carriage of multidrug-resistant organisms in dogs and cats presented to small animal practices and clinics in Switzerland. Journal of veterinary internal medicine, 35(2), pp. 970-979. Wiley-Blackwell 10.1111/jvim.16038
Ben Salah, Eya; Sakly, Wahiba; Barrera, Coralie; Mosbahi, Sana; Bellanger, Anne-Pauline; Farhani, Rabeb; Ksia, Amine; Gottstein, Bruno; Nouri, Abdellatif; Babba, Hamouda; Millon, Laurence (2021). Soluble programmed death-1 (sPD-1) as predictor of early surgical outcomes of paediatric cystic echinococcosis. Parasite immunology, 43(3), e12809. Wiley 10.1111/pim.12809
Zhou, Bin; Tran, Thi Nhu Thao; Hoffmann, Donata; Taddeo, Adriano; Ebert, Nadine; Labroussaa, Fabien; Pohlmann, Anne; King, Jacqueline; Steiner, Silvio; Kelly, Jenna N.; Portmann, Jasmine; Halwe, Nico Joel; Ulrich, Lorenz; Trüeb, Bettina Salome; Fan, Xiaoyu; Hoffmann, Bernd; Wang, Li; Thomann, Lisa; Lin, Xudong; Stalder, Hanspeter; ... (2021). SARS-CoV-2 spike D614G change enhances replication and transmission. Nature, 592(7852), pp. 122-127. Springer Nature 10.1038/s41586-021-03361-1
Sendi, Parham; Hasse, Barbara; Frank, Michelle; Flückiger, Ursula; Boggian, Katia; Guery, Benoit; Jeger, Raban; Zbinden, Stephan; Agyeman, Philipp Kwame Abayie; Knirsch, Walter; Greutmann, Matthias (2021). Infective endocarditis: prevention and antibiotic prophylaxis. Swiss medical weekly, 151(w20473), w20473. EMH Schweizerischer Ärzteverlag 10.4414/smw.2021.20473
Romoli, Ottavia; Schönbeck, Johan Claes; Hapfelmeier, Siegfried; Gendrin, Mathilde (2021). Production of germ-free mosquitoes via transient colonisation allows stage-specific investigation of host-microbiota interactions. Nature Communications, 12(1), p. 942. Springer Nature 10.1038/s41467-021-21195-3
Pfister, Simona P.; Schären, Olivier P.; Beldi, Luca; Printz, Andrea; D. Notter, Matheus; Mukherjee, Mohana; Li, Hai; Limenitakis, Julien P.; Werren, Joel P.; Tandon, Disha; Cuenca, Miguelangel; Hagemann, Stefanie; Uster, Stephanie S.; Terrazos, Miguel A.; Gomez de Agüero, Mercedes; Schürch, Christian M.; M. Coelho, Fernanda; Curtiss, Roy; Slack, Emma; Balmer, Maria L; ... (2021). Author Correction: Uncoupling of invasive bacterial mucosal immunogenicity from pathogenicity. Nature Communications, 12(1), p. 798. Springer Nature 10.1038/s41467-021-21096-5
Sudatip, Duangdao; Chasiri, Kittipong; Kritiyakan, Anamika; Phanprasit, Wantanee; Thinphovong, Chuanphot; Tiengrim, Surapee; Thamlikitkul, Visanu; Abdallah, Rim; Baron, SA; Rolain, JM; Morand, S; Hilty, Markus; Oppliger, Anne (2021). A One Health approach to assessing occupational exposure to antimicrobial resistance in Thailand: The FarmResist project. PLoS ONE, 16(1), e0245250. Public Library of Science 10.1371/journal.pone.0245250
Moser, Aline I.; Kuenzli, Esther; Büdel, Thomas; Campos-Madueno, Edgar I.; Bernasconi, Odette J.; DeCrom-Beer, Susan; Jakopp, Barbara; Mohammed, Ali Haji; Hassan, Nadir Khatib; Fehr, Jan; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2021). Travellers returning from the island of Zanzibar colonized with MDR Escherichia coli strains: assessing the impact of local people and other sources. The journal of antimicrobial chemotherapy, 76(2), pp. 330-337. Oxford University Press 10.1093/jac/dkaa457
Urwyler, Pascal; Charitos, Panteleimon; Moser, Stephan; Heijnen, Ingmar A F M; Trendelenburg, Marten; Thoma, Reto; Sumer, Johannes; Camacho-Ortiz, Adrián; Bacci, Marcelo R; Huber, Lars C; Stüssi-Helbling, Melina; Albrich, Werner C; Sendi, Parham; Osthoff, Michael (2021). Recombinant human C1 esterase inhibitor (conestat alfa) in the prevention of severe SARS-CoV-2 infection in hospitalized patients with COVID-19: A structured summary of a study protocol for a randomized, parallel-group, open-label, multi-center pilot trial (PROTECT-COVID-19). Trials, 22(1), p. 1. BioMed Central 10.1186/s13063-020-04976-x
Moor, Julia; Wüthrich, Tsering; Aebi, Susanne; Mostacci, Nadezda; Overesch, Gudrun; Oppliger, Anne; Hilty, Markus (2021). Influence of pig farming on human Gut Microbiota: role of airborne microbial communities. Gut microbes, 13(1), pp. 1-13. Taylor & Francis Group 10.1080/19490976.2021.1927634
Wang, Junhua; von Gunten, Stephan; Beldi, Guido; Grandgirard, Denis; Leib, Stephen L.; Gottstein, Bruno (2021). Digest the Sugar, Kill the Parasite: A New Experimental Concept in Treating Alveolar Echinococcosis. Pharmacology, 106(1-2), pp. 3-8. Karger 10.1159/000509355
Campos-Madueno, Edgar I.; Gmuer, Christian; Risch, Martin; Bodmer, Thomas; Endimiani, Andrea (2021). Characterization of a new blaVIM-1-carrying IncN2 plasmid from an Enterobacter hormaechei subsp. steigerwaltii. Journal of global antimicrobial resistance, 24, pp. 325-327. Elsevier 10.1016/j.jgar.2021.01.017
Werren, Joel P.; Troxler, Lukas J.; Oyewole, Oluwaseun Rume-Abiola; Ramette, Alban; Brugger, Silvio D.; Bruggmann, Rémy; van der Linden, Mark; Nahm, Moon H.; Gjuroski, Ilche; Casanova, Carlo; Furrer, Julien; Hilty, Markus (2021). Carbon Source-Dependent Changes of the Structure of Streptococcus pneumoniae Capsular Polysaccharide with Serotype 6F. International journal of molecular sciences, 22(9) MDPI 10.3390/ijms22094580
Abbühl, Mariesol; Risch, Martin; Kronenberg, Andreas (2021). COVID-19-Seroprävalenz-Studie bei Mitarbeitenden einer städtischen Hausarztpraxis (In Press). Primary and hospital care: allgemeine innere Medizin, 21(6), pp. 183-187. EMH Schweizerischer Ärzteverlag 10.4414/phc-d.2021.10353
Moser, Aline I.; Kuenzli, Esther; Campos-Madueno, Edgar I.; Büdel, Thomas; Rattanavong, Sayaphet; Vongsouvath, Manivanh; Hatz, Christoph; Endimiani, Andrea (2021). Antimicrobial-Resistant Escherichia coli Strains and Their Plasmids in People, Poultry, and Chicken Meat in Laos. Frontiers in Microbiology, 12 Frontiers 10.3389/fmicb.2021.708182
Erni, Silvia T.; Gill, John C.; Palaferri, Carlotta; Fernandes, Gabriella; Buri, Michelle; Lazarides, Katherine; Grandgirard, Denis; Edge, Albert S. B.; Leib, Stephen; Roccio, Marta (2021). Hair Cell Generation in Cochlear Culture Models Mediated by Novel γ-Secretase Inhibitors. Frontiers in cell and developmental biology, 9(2256) Frontiers 10.3389/fcell.2021.710159
Damonti, Lauro; Kronenberg, Andreas; Marschall, Jonas; Jent, Philipp; Sommerstein, Rami; De Kraker, Marlieke E. A.; Harbarth, Stephan; Gasser, Michael; Buetti, Niccolò (2021). The effect of the COVID-19 pandemic on the epidemiology of positive blood cultures in Swiss intensive care units: a nationwide surveillance study. Critical care, 25(1), p. 403. BioMed Central 10.1186/s13054-021-03814-z
Heinrich, Simon Martin; Sendi, Parham; Clauss, Martin (2021). Methylene blue for the diagnosis of a sinus tract in periprosthetic knee joint infection. Journal of bone and joint infection, 6(9), pp. 423-424. Ivyspring International Publisher 10.5194/jbji-6-423-2021
Moser, Aline I.; Keller, Peter M.; Campos-Madueno, Edgar I.; Poirel, Laurent; Nordmann, Patrice; Endimiani, Andrea (2021). A Patient With Multiple Carbapenemase Producers Including an Unusual Citrobacter sedlakii Hosting an IncC blaNDM-1- and armA-carrying Plasmid. Pathogens and Immunity, 6(2), pp. 119-134. Case Western Reserve University, Cleveland, OH 10.20411/pai.v6i2.482
Egli, Konrad; Wagner, Karoline; Keller, Peter M.; Risch, Lorenz; Risch, Martin; Bodmer, Thomas (2020). Comparison of the Diagnostic Performance of qPCR, Sanger Sequencing, and Whole-Genome Sequencing in Determining Clarithromycin and Levofloxacin Resistance in Helicobacter pylori. Frontiers in cellular and infection microbiology, 10(596371), p. 596371. Frontiers 10.3389/fcimb.2020.596371
Yildiz, Soner; Pereira Bonifacio Lopes, João P; Bergé, Matthieu; González-Ruiz, Víctor; Baud, Damian; Kloehn, Joachim; Boal-Carvalho, Inês; Schaeren, Olivier P; Schotsaert, Michael; Hathaway, Lucy J; Rudaz, Serge; Viollier, Patrick H; Hapfelmeier, Siegfried; Francois, Patrice; Schmolke, Mirco (2020). Respiratory tissue-associated commensal bacteria offer therapeutic potential against pneumococcal colonization. eLife, 9 eLife Sciences Publications 10.7554/eLife.53581
Hufsky, Franziska; Beerenwinkel, Niko; Meyer, Irmtraud M; Roux, Simon; Cook, Georgia May; Kinsella, Cormac M; Lamkiewicz, Kevin; Marquet, Mike; Nieuwenhuijse, David F; Olendraite, Ingrida; Paraskevopoulou, Sofia; Young, Francesca; Dijkman, Ronald; Ibrahim, Bashar; Kelly, Jenna; Le Mercier, Philippe; Marz, Manja; Ramette, Alban; Thiel, Volker (2020). The International Virus Bioinformatics Meeting 2020. Viruses, 12(12) Molecular Diversity Preservation International MDPI 10.3390/v12121398
Endimiani, Andrea; Ramette, Alban; Rhoads, Daniel D.; Jacobs, Michael R. (2020). The Evolving Role of the Clinical Microbiology Laboratory in Identifying Resistance in Gram-Negative Bacteria: An Update. Infectious disease clinics of North America, 34(4), pp. 659-676. Elsevier 10.1016/j.idc.2020.08.001
Hilty, Markus; Wüthrich, Tsering M.; Godel, Aurélie; Adelfio, Roberto; Aebi, Susanne; Burgener, Sabrina S.; Illgen-Wilcke, Brunhilde; Benarafa, Charaf (2020). Chronic cigarette smoke exposure and pneumococcal infection induce oropharyngeal microbiota dysbiosis and contribute to long-lasting lung damage in mice. Microbial genomics, 6(12) Microbiology Society 10.1099/mgen.0.000485
Gasbarri, Matteo; V'kovski, Philip; Torriani, Giulia; Thiel, Volker; Stellacci, Francesco; Tapparel, Caroline; Cagno, Valeria (2020). SARS-CoV-2 Inhibition by Sulfonated Compounds. Microorganisms, 8(12) MDPI 10.3390/microorganisms8121894
Dylus, David; Pillonel, Trestan; Opota, Onya; Wüthrich, Daniel; Seth-Smith, Helena M. B.; Egli, Adrian; Leo, Stefano; Lazarevic, Vladimir; Schrenzel, Jacques; Laurent, Sacha; Bertelli, Claire; Blanc, Dominique S.; Neuenschwander, Stefan; Ramette, Alban; Falquet, Laurent; Imkamp, Frank; Keller, Peter M.; Kahles, Andre; Oberhaensli, Simone; Barbié, Valérie; ... (2020). NGS-Based S. aureus Typing and Outbreak Analysis in Clinical Microbiology Laboratories: Lessons Learned From a Swiss-Wide Proficiency Test. Frontiers in Microbiology, 11, p. 591093. Frontiers 10.3389/fmicb.2020.591093
Renggli, Luzia; Gasser, Michael; Frey, Pascal M.; Kronenberg, Andreas (2020). Bekämpfung von Antibiotikaresistenzen in der Schweiz. Primary and Hospital Care, 20(11), pp. 352-355. EMH Swiss Medical Publishers Ltd. 10.4414/phc-d.2020.10319
Pfaender, Stephanie; Mar, Katrina B; Michailidis, Eleftherios; Kratzel, Annika; Boys, Ian N; V'kovski, Philip; Fan, Wenchun; Kelly, Jenna N.; Hirt, Dagny; Ebert, Nadine; Stalder, Hanspeter; Kleine-Weber, Hannah; Hoffmann, Markus; Heinrich Hoffmann, H; Saeed, Mohsan; Dijkman, Ronald; Steinmann, Eike; Wight-Carter, Mary; McDougal, Matthew B; Hanners, Natasha W; ... (2020). LY6E impairs coronavirus fusion and confers immune control of viral disease. Nature microbiology, 5(11), pp. 1330-1339. Springer Nature 10.1038/s41564-020-0769-y
Principe, Luigi; Bernasconi, Odette J.; Viaggi, Valentina; Campos-Madueno, Edgar I.; Endimiani, Andrea; Luzzaro, Francesco (2020). Emergence of Haemophilus parainfluenzae resistant to third-generation cephalosporins in Italy: potential role of PBP3 and PBP5 substitutions in high-level resistance. International journal of antimicrobial agents, 56(5), p. 106159. Elsevier 10.1016/j.ijantimicag.2020.106159
Flohr, Sarah; Ramette, Alban; Agyeman, Philipp K. A.; Duppenthaler, Andrea; Scherer, Cordula; Keller, Peter M.; Aebi, Christoph (2020). Recurrent Mycobacterium chelonae Skin Infection Unmasked as Factitious Disorder Using Bacterial Whole Genome Sequence Analysis. Open Forum Infectious Diseases, 7(11), ofaa506. Oxford University Press 10.1093/ofid/ofaa506
Marion, Solenne; Desharnais, Lyne; Studer, Nicolas; Dong, Yuan; Notter, Matheus D.; Poudel, Suresh; Menin, Laure; Janowczyk, Andrew; Hettich, Robert L; Hapfelmeier, Siegfried; Bernier-Latmani, Rizlan (2020). Biogeography of microbial bile acid transformations along the murine gut. Journal of lipid research, 61(11), pp. 1450-1463. American Society for Biochemistry and Molecular Biology ASBMB 10.1194/jlr.RA120001021
Voruz, Sophie; Gowland, Peter; Eyer, Claudia; Widmer, Nadja; Abonnenc, Mélanie; Prudent, Michel; Masouridi-Levrat, Stavroula; Duchosal, Michel A; Niederhauser, Christoph (2020). Transfusion-transmitted cytomegalovirus: behaviour of cell-free virus during blood component processing. A study on the safety of labile blood components in Switzerland. Blood transfusion, 18(6), pp. 446-453. SIMTI Servizi Srl 10.2450/2020.0241-19
Baldan, Rossella; Sendi, Parham (2020). Precision Medicine in the Diagnosis and Management of Orthopedic Biofilm Infections. Frontiers in medicine, 7, p. 580671. Frontiers 10.3389/fmed.2020.580671
Muri, Lukas; Oberhänsli, Simone; Buri, Michelle; Le, Ngoc Dung; Grandgirard, Denis; Bruggmann, Rémy; Müri, René M.; Leib, Stephen L. (2020). Repetitive transcranial magnetic stimulation activates glial cells and inhibits neurogenesis after pneumococcal meningitis. PLoS ONE, 15(9), e0232863. Public Library of Science 10.1371/journal.pone.0232863
Büdel, Thomas; Kuenzli, Esther; Campos-Madueno, Edgar I; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2020). On the island of Zanzibar people in the community are frequently colonized with the same MDR Enterobacterales found in poultry and retailed chicken meat. The journal of antimicrobial chemotherapy, 75(9), pp. 2432-2441. Oxford University Press 10.1093/jac/dkaa198
Balmer, Maria L; Ma, Eric H; Thompson, Andrew J; Epple, Raja; Unterstab, Gunhild; Lötscher, Jonas; Dehio, Philippe; Schürch, Christian M; Warncke, Jan D; Perrin, Gaëlle; Woischnig, Anne-Kathrin; Grählert, Jasmin; Löliger, Jordan; Assmann, Nadine; Bantug, Glenn R; Schären, Olivier P; Khanna, Nina; Egli, Adrian; Bubendorf, Lukas; Rentsch, Katharina; ... (2020). Memory CD8+ T Cells Balance Pro- and Anti-inflammatory Activity by Reprogramming Cellular Acetate Handling at Sites of Infection. Cell metabolism, 32(3), 457-467.e5. Elsevier 10.1016/j.cmet.2020.07.004
Piezzi, Vanja; Gasser, Michael; Atkinson, Andrew; Kronenberg, Andreas; Vuichard-Gysin, Danielle; Harbarth, Stephan; Marschall, Jonas; Buetti, Niccolò (2020). Increasing proportion of vancomycin-resistance among enterococcal bacteraemias in Switzerland: a 6-year nation-wide surveillance, 2013 to 2018. Eurosurveillance, 25(35) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2020.25.35.1900575
Mohsin Hassan, Mohsin Hassan; Moghadamrad, Sheida; Sorribas, Marcel; G. Muntet, Sergi; Kellmann, Philipp; Trentesaux, Coralie; Fraudeau, Marie; Nanni, Paolo; Wolski, Witold; Keller, Irene; Hapfelmeier, Siegfried; Shroyer, Noah F; Wiest, Reiner; Romagnolo, Beatrice; De Gottardi, Andrea (2020). Paneth cells promote angiogenesis and regulate portal hypertension in response to microbial signals. Journal of hepatology, 73(3), pp. 628-639. Elsevier 10.1016/j.jhep.2020.03.019
Keller, Peter; von Känel, Roland; Hincapié, Cesar A; da Costa, Bruno R; Jüni, Peter; Erlanger, Tobias E; Andina, Nicola; Niederhauser, Christoph; Lämmle, Bernhard; Fontana, Stefano (2020). The effects of intravenous iron supplementation on fatigue and general health in non-anemic blood donors with iron deficiency: a randomized placebo-controlled superiority trial. Scientific reports, 10(1), p. 14219. Springer Nature 10.1038/s41598-020-71048-0
Marzolini, Catia; Stader, Felix; Stoeckle, Marcel; Franzeck, Fabian; Egli, Adrian; Bassetti, Stefano; Hollinger, Alexa; Osthoff, Michael; Weisser, Maja; Gebhard, Caroline E; Baettig, Veronika; Geenen, Julia; Khanna, Nina; Tschudin-Sutter, Sarah; Mueller, Daniel; Hirsch, Hans H; Battegay, Manuel; Sendi, Parham (2020). Effect of Systemic Inflammatory Response to SARS-CoV-2 on Lopinavir and Hydroxychloroquine Plasma Concentrations. Antimicrobial agents and chemotherapy, 64(9) American Society for Microbiology 10.1128/AAC.01177-20
Wüthrich, Tsering Monika; Lese, Ioana; Haberthür, David; Zubler, Cédric Olivier; Hlushchuk, Ruslan; Hewer, Ekkehard; Maistriaux, Louis; Gianello, Pierre; Lengelé, Benoît; Rieben, Robert; Vögelin, Esther; Olariu, Radu; Duisit, Jérôme; Taddeo, Adriano (2020). Development of vascularized nerve scaffold using perfusion-decellularization and recellularization. Materials science & engineering C, 117(111311), p. 111311. Elsevier 10.1016/j.msec.2020.111311
Papanikolaou, Athanasios; Brugger, Jon; Sendi, Parham; Olariu, Radu (2020). An unusual clinical presentation of necrotizing fasciitis. Infection, 48(4), pp. 655-656. 10.1007/s15010-020-01405-8
Brigger, Daniel; Riether, Carsten; van Brummelen, Robin; Mosher, Kira I; Shiu, Alicia; Ding, Zhaoqing; Zbären, Noemi; Gasser, Pascal; Guntern, Pascal; Yousef, Hanadie; Castellano, Joseph M; Storni, Federico; Graff-Radford, Neill; Britschgi, Markus; Grandgirard, Denis; Hinterbrandner, Magdalena; Siegrist, Mark; Moullan, Norman; Hofstetter, Wilhelm; Leib, Stephen L.; ... (2020). Eosinophils regulate adipose tissue inflammation and sustain physical and immunological fitness in old age. Nature metabolism, 2(8), pp. 688-702. Springer Nature 10.1038/s42255-020-0228-3
Li, Hai; Limenitakis, Julien Periclis Jean; Greiff, Victor; Yilmaz, Bahtiyar; Schären, Olivier Pascal; Urbaniak, Camilla; Zünd, Mirjam; Lawson, Melissa; Young, Ian D.; Rupp, Sandra; Heikenwälder, Mathias; McCoy, Kathleen; Hapfelmeier, Siegfried; Ganal-Vonarburg, Stephanie C.; Macpherson, Andrew J. (2020). Mucosal or systemic microbiota exposures shape the B cell repertoire. Nature, 584(7820), pp. 274-278. Springer Nature 10.1038/s41586-020-2564-6
Grädel, Carole; Terrazos Miani, Miguel A.; Baumann, Christian; Barbani, Maria Teresa; Neuenschwander, Stefan; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). Whole-Genome Sequencing of Human Enteroviruses from Clinical Samples by Nanopore Direct RNA Sequencing. Viruses, 12(8) Molecular Diversity Preservation International MDPI 10.3390/v12080841
European Patent Office (2020). Conjugative vectors selectable by fructooligosaccharides (3541942)
Prazák, Josef; Valente, Luca; Iten, Manuela; Grandgirard, Denis; Leib, Stephen; Jakob, Stephan M.; Hänggi, Matthias; Que, Yok-Ai; Cameron, David R. (2020). Nebulized Bacteriophages for Prophylaxis of Experimental Ventilator-Associated Pneumonia Due to Methicillin-Resistant Staphylococcus aureus. Critical care medicine, 48(7), pp. 1042-1046. Wolters Kluwer Health 10.1097/CCM.0000000000004352
Tran, Thi Nhu Thao; Labroussaa, Fabien; Ebert, Nadine; V'kovski, Philip; Stalder, Hanspeter; Portmann, Jasmine; Kelly, Jenna; Steiner, Silvio; Holwerda, Melle; Kratzel, Annika; Gultom, Mitra; Schmied, Kimberly; Laloli, Laura; Hüsser, Linda; Wider, Manon; Pfaender, Stephanie; Hirt, Dagny; Cippà, Valentina; Crespo-Pomar, Silvia; Schröder, Simon; ... (2020). Rapid reconstruction of SARS-CoV-2 using a synthetic genomics platform. Nature, 582(7813), pp. 561-565. Springer Nature 10.1038/s41586-020-2294-9
Eiden, Sebastian; Dijkman, Ronald; Zell, Roland; Fuchs, Jonas; Kochs, Georg (2020). Using a mouse-adapted A/HK/01/68 influenza virus to analyse the impact of NS1 evolution in codons 196 and 231 on viral replication and virulence. Journal of general virology, 101(6), pp. 587-598. Society for General Microbiology 10.1099/jgv.0.001422
Osinga, Rik; Eggimann, Maurice Michel; Lo, Steven John; Kühl, Richard; Lunger, Alexander; Ochsner, Peter Emil; Sendi, Parham; Clauss, Martin; Schaefer, Dirk Johannes (2020). Orthoplastics in Periprosthetic Joint Infection of the Knee: Treatment Concept for Composite Soft-tissue Defect with Extensor Apparatus Deficiency. Journal of bone and joint infection, 5(3), pp. 160-171. Ivyspring International Publisher 10.7150/jbji.47018
Meyer, Patricia; Grandgirard, Denis; Lehner, Marika; Haenggi, Matthias; Leib, Stephen (2020). Grafted neural progenitor cells persist in the injured site and differentiate neuronally in a rodent model of cardiac arrest-induced global brain ischemia. Stem cells and development, 29(9), pp. 574-585. Mary Ann Liebert 10.1089/scd.2019.0190
Blockus, Sebastian; Sake, Svenja M; Wetzke, Martin; Grethe, Christina; Graalmann, Theresa; Pils, Marina; Le Goffic, Ronan; Galloux, Marie; Prochnow, Hans; Rox, Katharina; Hüttel, Stephan; Rupcic, Zeljka; Wiegmann, Bettina; Dijkman, Ronald; Rameix-Welti, Marie-Anne; Eléouët, Jean-François; Duprex, W Paul; Thiel, Volker; Hansen, Gesine; Brönstrup, Mark; ... (2020). Labyrinthopeptins as virolytic inhibitors of respiratory syncytial virus cell entry. Antiviral research, 177, p. 104774. Elsevier 10.1016/j.antiviral.2020.104774
Pfister, Simona; Schären, Olivier P.; Beldi, Luca; Printz, Andrea; Notter, Matheus D.; Mukherjee, Mohana; Li, Hai; Limenitakis, Julien P.; Werren, Joel P.; Tandon, Disha; Cuenca Vera, Miguelangel; Hagemann, Stefanie Claudia; Uster, Stephanie S.; Terrazos, Miguel A.; Gomez de Agüero, Mercedes; Schürch, Christian M.; Matos Coelho, Fernanda; Curtiss, Roy; Slack, Emma; Balmer, Maria L.; ... (2020). Uncoupling of invasive bacterial mucosal immunogenicity from pathogenicity. Nature Communications, 11(1), p. 1978. Springer Nature 10.1038/s41467-020-15891-9
Endimiani, Andrea; Bernasconi, Odette Joëlle; Büdel, Thomas; Campos-Madueno, Edgar I.; Kuenzli, Esther; Hatz, Christoph; Carattoli, Alessandra (2020). Whole-genome characterization of a Shewanella algae strain co-harboring blaCTX-M-15 and armA genes on a novel IncC plasmid. Antimicrobial agents and chemotherapy, 64(5) American Society for Microbiology 10.1128/AAC.00267-20
Knapp, Jenny; Gottstein, Bruno; Bretagne, Stéphane; Bart, Jean-Mathieu; Umhang, Gérald; Richou, Carine; Bresson-Hadni, Solange; Millon, Laurence (2020). Genotyping Echinococcus multilocularis in Human Alveolar Echinococcosis Patients: An EmsB Microsatellite Analysis. Pathogens, 9(4) MDPI AG 10.3390/pathogens9040282
Akello, Joyce Odeke; Kamgang, Richard; Barbani, Maria Teresa; Suter-Riniker, Franziska; Leib, Stephen L; Ramette, Alban (2020). Epidemiology of Human Adenoviruses: A 20-Year Retrospective Observational Study in Hospitalized Patients in Bern, Switzerland. Clinical epidemiology, 12, pp. 353-366. Dove Medical Press 10.2147/CLEP.S246352
Kümin, Daniel; Gsell Albert, Monika; Weber, Benjamin; Summermatter, Kathrin (2020). The Hitchhiker’s Guide to Hydrogen Peroxide Fumigation, Part 2: Verifying and Validating Hydrogen Peroxide Fumigation Cycles. Applied biosafety, p. 153567602092109. Sage 10.1177/1535676020921099
Stettler, Jolanda; Lejon Crottet, Sofia; Still, Franziska; Graber, Julia; Niederhauser, Christoph; Waldvogel, Sophie; Henny, Christine (2020). Reduced RhD antigen expression caused by two novel RHD variant alleles. Transfusion, 60(4), E7-E8. Wiley-Blackwell 10.1111/trf.15714
Neuenschwander, Stefan Moritz; Terrazos Miani, Miguel Angel; Amlang, Heiko; Perroulaz, Carmen; Bittel, Pascal; Casanova, Carlo; Droz, Sara; Flandrois, Jean-Pierre; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2020). A Sample-to-Report Solution for Taxonomic Identification of Cultured Bacteria in the Clinical Setting Based on Nanopore Sequencing. Journal of clinical microbiology, 58(6) American Society for Microbiology 10.1128/JCM.00060-20
Endimiani, Andrea; Brilhante, Michael; Bernasconi, Odette J.; Perreten, Vincent; Schmidt, Janne S; Dazio, Valentina; Nigg, Aurélien; Gobeli Brawand, Stefanie; Kuster, Stefan P; Schuller, Simone; Willi, Barbara (2020). Employees of Swiss veterinary clinics colonized with epidemic clones of carbapenemase-producing Escherichia coli. Journal of antimicrobial chemotherapy, 75(3), pp. 766-768. Oxford University Press 10.1093/jac/dkz470
Brackmann, Maximilian; Leib, Stephen; Tonolla, Mauro; Schürch, Nadia; Wittwer, Matthias (2020). Antimicrobial resistance Classification using MALDI-TOF-MS is not that easy: Lessons from vancomycin-resistant Enterococcus faecium. Clinical microbiology and infection, 26(3), pp. 391-393. Elsevier 10.1016/j.cmi.2019.10.027
Zhou, Hao; Møhlenberg, Michelle; Terczyńska-Dyla, Ewa; Winther, Kasper Grønbjerg; Hansen, Nanna Hougaard; Vad-Nielsen, Johan; Laloli, Laura; Dijkman, Ronald; Nielsen, Anders Lade; Gad, Hans Henrik; Hartmann, Rune (2020). The IFNL4 gene is a non-canonical interferon gene with a unique but evolutionarily conserved regulation. Journal of virology, 94(5) American Society for Microbiology 10.1128/JVI.01535-19
Hodel, M.; Lejon Crottet, S.; Raio, L.; Zimmermann, R.; Lapaire, O.; Canellini, G.; Henny, C.; Niederhauser, C.; Waldvogel, S.; Fontana, S. (2020). Empfehlungen zur Anti-D Immunglobulin-Gabe in der Schwangerschaft (Anti-D-Prophylaxe). Gynäkologie(1), pp. 25-28. Rosenfluh Publikationen
Müller, Annelies; Salmen, Anke; Aebi, Susanne; de Gouveia, Linda; von Gottberg, Anne; Hathaway, Lucy J. (2020). Pneumococcal serotype determines growth and capsule size in human cerebrospinal fluid. BMC microbiology, 20(1), p. 16. BioMed Central 10.1186/s12866-020-1700-7
Plüss-Suard, Catherine; Niquille, Anne; Héquet, Delphine; Krähenbühl, Séverine; Pichon, Renaud; Zanetti, Giorgio; Bugnon, Olivier; Petignat, Christiane (2020). Decrease in Antibacterial Use and Facility-Level Variability After the Introduction of Guidelines and Implementation of Physician-Pharmacist-Nurse Quality Circles in Swiss Long-term Care Facilities. Journal of the American Medical Directors Association, 21(1), pp. 78-83. Elsevier 10.1016/j.jamda.2019.05.016
Egli, Adrian; Koch, Daniel; Danuser, Jürg; Hendriksen, Rene S; Driesen, Susanne; Schmid, Diana Coman; Neher, Richard; Mäusezahl, Mirjam; Seth-Smith, Helena Mb; Bloemberg, Guido; Tschudin-Sutter, Sarah; Endimiani, Andrea; Perreten, Vincent; Greub, Gilbert; Schrenzel, Jacques; Stephan, Roger (2020). Symposium report: One Health meets sequencing. Microbes and infection, 22(1), pp. 1-7. Elsevier Masson SAS 10.1016/j.micinf.2019.07.004
Kaiser-Thom, S.; Hilty, Markus; Gerber, V. (2020). Effects of hypersensitivity disorders and environmental factors on the equine intestinal microbiota. The veterinary quarterly, 40(1), pp. 97-107. Taylor & Francis 10.1080/01652176.2020.1745317
Bernasconi, Odette J.; Campos-Madueno, Edgar I.; Donà, Valentina; Perreten, Vincent; Carattoli, Alessandra; Endimiani, Andrea (2020). Investigating the Use of Bacteriophages as New Decolonization Strategy for Intestinal Carriage of CTX-M-15-producing ST131 Escherichia coli: An In Vitro Continuous Culture System Model. Journal of global antimicrobial resistance, 22, pp. 664-671. Elsevier 10.1016/j.jgar.2020.05.018
Schmidt, Janne S.; Kuster, Stefan P.; Nigg, Aurélien; Dazio, Valentina; Brilhante, Michael; Rohrbach, Helene; Bernasconi, Odette J.; Büdel, Thomas; Campos-Madueno, Edgar I.; Gobeli Brawand, Stefanie; Schuller, Simone; Endimiani, Andrea; Perreten, Vincent; Willi, Barbara (2020). Poor infection prevention and control standards are associated with environmental contamination with carbapenemase-producing Enterobacterales and other multidrug-resistant bacteria in Swiss companion animal clinics. Antimicrobial resistance and infection control, 9(1) BioMed Central 10.1186/s13756-020-00742-5
Bleichenbacher, Stephanie; Stevens, Marc J.A.; Zurfluh, Katrin; Perreten, Vincent; Endimiani, Andrea; Stephan, Roger; Nüesch-Inderbinen, Magdalena (2020). Environmental dissemination of carbapenemase-producing enterobacteriaceae in rivers in Switzerland. Environmental pollution, 265, p. 115081. Elsevier Science 10.1016/j.envpol.2020.115081
Campos-Madueno, Edgar I.; Bernasconi, Odette J.; Moser, Aline I.; Keller, Peter M.; Luzzaro, Francesco; Maffioli, Carola; Bodmer, Thomas; Kronenberg, Andreas; Endimiani, Andrea (2020). Rapid Increase of CTX-M-Producing Shigella sonnei Isolates in Switzerland: Spread of Common Plasmids and International Clones. Antimicrobial agents and chemotherapy, 64(10) American Society for Microbiology 10.1128/AAC.01057-20
Le, Ngoc Dung; Muri, Lukas; Grandgirard, Denis; Kuhle, Jens; Leppert, David; Leib, Stephen L. (2020). Evaluation of neurofilament light chain in the cerebrospinal fluid and blood as a biomarker for neuronal damage in experimental pneumococcal meningitis. Journal of neuroinflammation, 17(1), p. 293. BioMed Central 10.1186/s12974-020-01966-3
Wang, Junhua; Marreros, Nelson; Rufener, Reto; Hemphill, Andrew; Gottstein, Bruno; Lundström-Stadelmann, Britta (2020). Short communication: Efficacy of albendazole in Echinococcus multilocularis-infected mice depends on the functional immunity of the host. Experimental parasitology, 219, p. 108013. Elsevier 10.1016/j.exppara.2020.108013
Zbinden, Florian R.; De Ste Croix, Megan; Grandgirard, Denis; Haigh, Richard D; Vacca, Irene; Zamudio, Roxana; Goodall, Emily C A; Stephan, Roger; Oggioni, Marco R; Leib, Stephen L. (2020). Pathogenic Differences of Type 1 Restriction-Modification Allele Variants in Experimental Listeria monocytogenes Meningitis. Frontiers in cellular and infection microbiology, 10, p. 590657. Frontiers 10.3389/fcimb.2020.590657
Pan, Steven D.; Grandgirard, Denis; Leib, Stephen L. (2020). Adjuvant Cannabinoid Receptor Type 2 Agonist Modulates the Polarization of Microglia Towards a Non-Inflammatory Phenotype in Experimental Pneumococcal Meningitis. Frontiers in cellular and infection microbiology, 10 Frontiers 10.3389/fcimb.2020.588195
Kümin, Daniel; Gsell Albert, Monika; Weber, Benjamin; Summermatter, Kathrin (2020). The Hitchhiker’s Guide to Hydrogen Peroxide Fumigation, Part 1: Introduction to Hydrogen Peroxide Fumigation. Applied biosafety, 25(4), pp. 214-224. Sage 10.1177/1535676020921007
Gultom, Mitra; Laloli, Laura; Dijkman, Ronald (2020). Well-Differentiated Primary Mammalian Airway Epithelial Cell Cultures. In: Maier, Helena J.; Bickerton, Erica (eds.) Coronaviruses. Methods and Protocols. Methods in Molecular Biology: Vol. 2203 (pp. 119-134). Humana, New York, NY 10.1007/978-1-0716-0900-2_10
Vuitton, Dominique A; McManus, Donald P; Rogan, Michael T; Romig, Thomas; Gottstein, Bruno; Naidich, Ariel; Tuxun, Tuerhongjiang; Wen, Hao; Menezes da Silva, Antonio (2020). International consensus on terminology to be used in the field of echinococcoses. Parasite, 27(41), p. 41. EDP Sciences 10.1051/parasite/2020024
Kuenzli, Esther; Büdel, Thomas; Bernasconi, Odette J.; Schlagenhauf, Patricia; Florek, Peter; Gültekin, Nejla; Hatz, Christoph; Endimiani, Andrea (2019). Intestinal Colonization with Multidrug-Resistant Enterobacteriaceae: Screening of Swiss Military Deployed to Kosovo. Journal of global antimicrobial resistance, 19, pp. 93-95. Elsevier 10.1016/j.jgar.2019.08.027
Vasoo, Shawn; Chan, Monica; Sendi, Parham; Berbari, Elie (2019). The Value of Ortho-ID Teams in Treating Bone and Joint Infections. Journal of bone and joint infection, 4(6), pp. 295-299. Ivyspring International Publisher 10.7150/jbji.41663
Wasimuddin, Wasimuddin; Schlaeppi, Klaus; Ronchi, Francesca; Leib, Stephen L.; Erb, Matthias; Ramette, Alban (15 November 2019). Evaluation of primer pairs for microbiome profiling across a food chain from soils to humans within the One Health framework (bioRxiv). Cold Spring Harbor Laboratory 10.1101/843144
Kuemin, Daniel; Gsell Albert, Monika; Summermatter, Katharina (2019). Case Study: Room Fumigation Using Aerosolized Hydrogen Peroxide—A Versatile and Economic Fumigation Method. Applied Biosafety, 24(4), pp. 1-7. Sage 10.1177/1535676019887049
Salcher, Michaela M; Schaefle, Daniel; Kaspar, Melissa; Neuenschwander, Stefan M.; Ghai, Rohit (2019). Evolution in action: habitat transition from sediment to the pelagial leads to genome streamlining in Methylophilaceae. The ISME journal, 13(11), pp. 2764-2777. Springer Nature 10.1038/s41396-019-0471-3
Asner, Sandra A; Agyeman, Philipp; Gradoux, Eugénie; Posfay-Barbe, Klara M; Heininger, Ulrich; Giannoni, Eric; Crisinel, Pierre A; Stocker, Martin; Bernhard-Stirnemann, Sara; Niederer-Loher, Anita; Kahlert, Christian R; Hasters, Paul; Relly, Christa; Baer, Walter; Aebi, Christoph; Schlapbach, Luregn Jan; Berger, Christoph (2019). Burden of Streptococcus pneumoniae sepsis in children after introduction of pneumococcal conjugate vaccines - a prospective population-based cohort study. Clinical infectious diseases, 69(9), pp. 1574-1580. The University of Chicago Press 10.1093/cid/ciy1139
Cameron, David R.; Ramette, Alban; Prazak, Josef; Entenza, José; Hänggi, Matthias; Que, Yok-Ai; Resch, Grégory (2019). Draft Genome Sequence of Methicillin-Resistant Staphylococcus aureus Strain AW7, Isolated from a Patient with Bacteremia. Microbiology resource announcements, 8(40) American Society for Microbiology 10.1128/MRA.00806-19
Büdel, Thomas; Kuenzli, Esther; Clément, Mathieu; Bernasconi, Odette J.; Fehr, Jan; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (2019). Polyclonal gut colonization with extended-spectrum cephalosporin- and/or colistin-resistant Enterobacteriaceae: a normal status for hotel employees on the island of Zanzibar, Tanzania. The journal of antimicrobial chemotherapy, 74(10), pp. 2880-2890. Oxford University Press 10.1093/jac/dkz296
Grüter, Basil Erwin; Täschler, Dominik; Strange, Fabio; Rey, Jeannine; von Gunten, Michael; Grandgirard, Denis; Leib, Stephen; Remonda, Luca; Widmer, Hans Rudolf; Nevzati, Edin; Fandino, Javier; Marbacher, Serge; Coluccia, Daniel (2019). Testing bioresorbable stent feasibility in a rat aneurysm model. Journal of neurointerventional surgery, 11(10), pp. 1050-1054. BMJ Publishing Group 10.1136/neurintsurg-2018-014697
Clément, Mathieu; Keller, Peter Michael; Bernasconi, Odette Joëlle; Stirnimann, Guido; Frey, Pascal M.; Bloemberg, Guido V.; Sendi, Parham; Endimiani, Andrea (2019). First Clinical Case of In Vivo Acquisition of DHA-1 plasmid-mediated AmpC in a Salmonella enterica subsp. enterica Isolate. Antimicrobial agents and chemotherapy, 63(10) American Society for Microbiology 10.1128/AAC.00992-19
Pires, Humberto; Martins, Manuel; Matos, Ana Cristina; Cardoso, Luís; Monteiro, Fernando; Roque, Natália; Nunes, Telmo; Gottstein, Bruno; Cortes, Helder (2019). Geospatial analysis applied to seroepidemiological survey of canine leishmaniosis in east-central Portugal. Veterinary parasitology, 274, p. 108930. Elsevier 10.1016/j.vetpar.2019.108930
Jakob, Manuel O.; Sánchez-Taltavull, Daniel; Yilmaz, Bahtiyar; Malinka, Thomas; Mooser, Catherine; Spari, Daniel; Salm, Lilian A.; Freiburghaus, Katrin; Pereyra, David; Hapfelmeier, Siegfried; Masoodi, Mojgan; Starlinger, Patrick; Stroka, Deborah; Tschan, Franziska; Candinas, Daniel; Gomez de Agüero, Mercedes; Beldi, Guido (19 September 2019). Compartmentalization of intestinal bacteria by hepatic ILC3s prevents infections after surgery (bioRxiv). Cold Spring Harbor Laboratory 10.1101/773150
Nigg, Aurélien; Brilhante, Michael; Dazio, Valentina; Clément, Mathieu; Collaud, Alexandra; Gobeli, Stefanie; Willi, Barbara; Endimiani, Andrea; Schuller, Simone; Perreten, Vincent (2019). Shedding of OXA-181 carbapenemase-producing Escherichia coli from companion animals after hospitalisation in Switzerland: an outbreak in 2018. Eurosurveillance, 24(39), pp. 13-24. European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2019.24.39.1900071
Lachenmayer, A.; Gebbers, D.; Gottstein, B.; Candinas, D.; Beldi, G. (2019). Elevated incidence of alveolar echinococcosis in immunocompromised patients. Food and waterborne parasitology, 16, e00060. Elsevier 10.1016/j.fawpar.2019.e00060
Grädel, Carole; Terrazos Miani, Miguel Angel; Barbani, Maria Teresa; Leib, Stephen L.; Suter-Riniker, Franziska; Ramette, Alban (2019). Rapid and Cost-Efficient Enterovirus Genotyping from Clinical Samples Using Flongle Flow Cells. Genes, 10(9) MDPI, Molecular Diversity Preservation International 10.3390/genes10090659
Junier, Thomas; Huber, Michael; Schmutz, Stefan; Kufner, Verena; Zagordi, Osvaldo; Neuenschwander, Stefan; Ramette, Alban; Kubacki, Jakub; Bachofen, Claudia; Qi, Weihong; Laubscher, Florian; Cordey, Samuel; Kaiser, Laurent; Beuret, Christian; Barbié, Valérie; Fellay, Jacques; Lebrand, Aitana (2019). Viral Metagenomics in the Clinical Realm: Lessons Learned from a Swiss-Wide Ring Trial. Genes, 10(9) MDPI 10.3390/genes10090655
Thomi, Gierin; Joerger-Messerli, Marianne; Haesler, Valérie; Muri, Lukas; Surbek, Daniel; Schoeberlein, Andreina (2019). Intranasally Administered Exosomes from Umbilical Cord Stem Cells Have Preventive Neuroprotective Effects and Contribute to Functional Recovery after Perinatal Brain Injury. Cells, 8(8) MDPI 10.3390/cells8080855
Muri, Lukas Kilian; Leppert, David; Grandgirard, Denis; Leib, Stephen (2019). MMPs and ADAMs in neurological infectious diseases and multiple sclerosis. Cellular and molecular life sciences : CMLS, 76(16), pp. 3097-3116. Springer 10.1007/s00018-019-03174-6
Muri, Lukas Kilian; Le, Ngoc Dung; Zemp, Jonas; Grandgirard, Denis; Leib, Stephen L. (2019). Metformin mediates neuroprotection and attenuates hearing loss in experimental pneumococcal meningitis. Journal of neuroinflammation, 16(1), p. 156. BioMed Central 10.1186/s12974-019-1549-6
Massolo, Alessandro; Klein, Claudia; Kowalewska-Grochowska, Kinga; Belga, Sara; MacDonald, Clayton; Vaughan, Stephen; Girgis, Safwat; Giunchi, Dimitri; Bramer, Sarah A; Santa, Maria A; Grant, Danielle M; Mori, Kensuke; Duignan, Padraig; Slater, Owen; Gottstein, Bruno; Müller, Norbert; Houston, Stan (2019). European Echinococcus multilocularis Identified in Patients in Canada. The New England journal of medicine, 381(4), pp. 384-385. Massachusetts Medical Society 10.1056/NEJMc1814975
Muri, Lukas; Perny, Michael; Zemp, Jonas; Grandgirard, Denis; Leib, Stephen L. (2019). Combining Ceftriaxone with Doxycycline and Daptomycin Reduces Mortality, Neuroinflammation, Brain Damage and Hearing Loss in Infant Rat Pneumococcal Meningitis. Antimicrobial agents and chemotherapy, 63(7) American Society for Microbiology 10.1128/AAC.00220-19
Hapfelmeier, Siegfried (2019). Outrunning Salmonella - the role of endogenous Enterobacteriaceae in variable colonization resistance. Lab animal, 48(7), pp. 203-204. Nature Publ. Co. 10.1038/s41684-019-0327-5
Donà, Valentina; Scheidegger, Maximilian; do Couto Pires, João Pedro; Furrer, Hansjakob; Atkinson, Andrew; Babouee Flury, Baharak (2019). Gradual in vitro Evolution of Cefepime Resistance in an ST131 Escherichia coli Strain Expressing a Plasmid-Encoded CMY-2 β-Lactamase. Frontiers in Microbiology, 10, p. 1311. Frontiers 10.3389/fmicb.2019.01311
Luzzaro, Francesco; Clément, Mathieu; Principe, Luigi; Viaggi, Valentina; Bernasconi, Odette J; Endimiani, Andrea (2019). Characterization of the first ESBL-producing Shigella sonnei Clinical Isolate in Italy. Journal of global antimicrobial resistance, 17, pp. 58-59. Elsevier 10.1016/j.jgar.2019.03.004
Hupp, Sabrina; Grandgirard, Denis; Mitchell, Timothy J.; Leib, Stephen; Hathaway, Lucy Jane; Iliev, Asparouh I. (2019). Pneumolysin and the bacterial capsule of Streptococcus pneumoniae cooperatively inhibit taxis and motility of microglia. Journal of neuroinflammation, 16(1), p. 105. BioMed Central 10.1186/s12974-019-1491-7
Krämer, Julia Gabriele; Aebi, Susanne; Oppliger, Anne; Hilty, Markus (2019). Indoor air microbiota of pig farms drives the composition of the pig farmer's nasal microbiota in a season dependent and farm specific manner. Applied and environmental microbiology, 85(9) American Society for Microbiology 10.1128/AEM.03038-18
Büdel, Thomas; Clément, Mathieu; Bernasconi, Odette J.; Principe, Luigi; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2019). Evaluation of EDTA- and DPA-Based Microdilution Phenotypic Tests for the Detection of MCR-Mediated Colistin Resistance in Enterobacteriaceae. Microbial drug resistance, 25(4), pp. 494-500. Mary Ann Liebert 10.1089/mdr.2018.0275
Ackermann-Gäumann, Rahel; Eyer, Claudia; Leib, Stephen; Niederhauser-Lüthi, Christoph (2019). Comparison of Four Commercial IgG-Enzyme-Linked Immunosorbent Assays for the Detection of Tick-Borne Encephalitis Virus Antibodies. Vector borne and zoonotic diseases, 19(5), pp. 358-364. Mary Ann Liebert 10.1089/vbz.2018.2359
Büdel, Thomas; Kuenzli, Esther; Clément, Mathieu; Bernasconi, Odette Joëlle; Fehr, Jan; Mohammed, Ali Haji; Hassan, Nadir Khatib; Zinsstag, Jakob; Hatz, Christoph; Endimiani, Andrea (14 April 2019). High prevalence of gut colonization with extended-spectrum cephalosporin- and colistin-resistant Enterobacteriaceae in healthy people in Zanzibar, Tanzania (Unpublished). In: 29th European Congress of Clinical Microbiology and Infectious Diseases (ECCMID). Amsterdam. 13-16 April, 2019.
Korten, Insa; Ramsey, Kathryn; Mika, Moana; Usemann, Jakob; Frey, Urs; Hilty, Markus; Latzin, Philipp (2019). Nasal Microbiota and Respiratory Tract Infections: The Role of Viral Detection. American journal of respiratory and critical care medicine, 199(7), pp. 919-922. American Lung Association 10.1164/rccm.201710-2020LE
Sendi, Parham; Wustmann, Kerstin; Büchi, Annina E.; Noti, Fabian; Klaeser, Bernd; Sonderegger, Beat; Auf der Maur, Christoph; Mercier, Thomas; Schwerzmann, Markus; Ruppen, Corinne (2019). Cardiac Implantable Electronic Device–Related Infection Due to Granulicatella adiacens. Open Forum Infectious Diseases, 6(4), ofz130. Oxford University Press 10.1093/ofid/ofz130
Stolz, Martin; Gowland, Peter; Tinguely, Caroline; Niederhauser-Lüthi, Christoph (2019). Safe-Testing Algorithm for Individual-Donation Nucleic Acid Testing: 10 Years of Experience in a Low-Prevalence Country. Transfusion medicine and hemotherapy, 46(2), pp. 104-110. Karger 10.1159/000499166
Endimiani, Andrea (15 March 2019). Carbapenem-resistant Enterobacteriaceae in the community (Unpublished). In: 7° Congresso AMIT Internazionale. Argomenti di Malattie Infettive e Tropicali. Milan. 14-15.03.2019.
Wenker, Christian; Hoby, Stefan; Wyss, Fabia; Mengiardi, Bernard; Vögtli, Renate; Posthaus, Horst; Deplazes, Peter; Gottstein, Bruno (2019). ALVEOLAR ECHINOCOCCOSIS IN WESTERN LOWLAND GORILLAS (GORILLA GORILLA GORILLA): ALBENDAZOLE WAS NOT ABLE TO STOP PROGRESSION OF THE DISEASE. Journal of zoo and wildlife medicine, 50(1), pp. 243-253. American Association of Zoo Veterinarians 10.1638/2018-0064
Colicchio, Roberta; Pagliuca, Chiara; Ricci, Susanna; Scaglione, Elena; Grandgirard, Denis; Masouris, Ilias; Farina, Fabrizio; Pagliarulo, Caterina; Mantova, Giuseppe; Paragliola, Laura; Leib, Stephen; Koedel, Uwe; Pozzi, Gianni; Alifano, Pietro; Salvatore, Paola (2019). Virulence traits of serogroup C meningococcus and isogenic mutant, defective in surface-exposed sialic acid, in a murine model of meningitis. Infection and immunity, 87(4) American Society for Microbiology 10.1128/IAI.00688-18
Ott, Sebastian Robert; Meier, N; Kolditz, Martin; Bauer, Torsten T; Rohde, Gernot; Presterl, Elisabeth; Schürmann, Dirk; Lepper, Philipp M; Ringshausen, Felix C; Flick, Holger; Leib, Stephen; Pletz, Mathias W (2019). "Pulmonary Nocardiosis in Western Europe-Clinical evaluation of 43 patients and population-based estimates of hospitalization rates". International journal of infectious diseases, 81, pp. 140-148. Elsevier 10.1016/j.ijid.2018.12.010
V'kovski, Philip; Gerber, Markus; Kelly, Jenna Nicole; Pfänder, Stephanie; Ebert, Nadine; Braga Lagache, Sophie; Simillion, Cedric; Portmann, Jasmine; Stalder, Hanspeter; Gaschen, Véronique; Bruggmann, Rémy; Stoffel, Michael Hubert; Heller, Manfred; Dijkman, Ronald; Thiel, Volker Earl (2019). Determination of host proteins composing the microenvironment of coronavirus replicase complexes by proximity-labeling. eLife, 8 eLife Sciences Publications 10.7554/eLife.42037
Ruff, S E; Felden, J; Gruber-Vodicka, H R; Marcon, Y; Knittel, K; Ramette, A.; Boetius, A (2019). In situ development of a methanotrophic microbiome in deep-sea sediments. The ISME journal, 13(1), pp. 197-213. Nature Publishing Group 10.1038/s41396-018-0263-1
do Couto Pires, João Pedro; Kraemer, Julia G.; Kuenzli, Esther; Kasraian, Sara; Tinguely, Regula; Hatz, Christoph; Endimiani, Andrea; Hilty, Markus (2019). Gut microbiota dynamics in travelers returning from India colonized with extended-spectrum cephalosporin-resistant Enterobacteriaceae: A longitudinal study. Travel medicine and infectious disease, 27, pp. 72-80. Elsevier 10.1016/j.tmaid.2018.10.012
Marion, Solenne; Studer, Nicolas; Desharnais, Lyne; Menin, Laure; Escrig, Stéphane; Meibom, Anders; Hapfelmeier, Siegfried Hektor; Bernier-Latmani, Rizlan (2019). In vitro and in vivo characterization of Clostridium scindens bile acid transformations. Gut microbes, 10(4), pp. 481-503. Taylor & Francis 10.1080/19490976.2018.1549420
Molari, Massimiliano; Guilini, Katja; Lins, Lidia; Ramette, Alban; Vanreusel, Ann (2019). CO2 leakage can cause loss of benthic biodiversity in submarine sands. Marine environmental research, 144, pp. 213-229. Elsevier 10.1016/j.marenvres.2019.01.006
Gasser, Michael; Zingg, Walter; Cassini, Alessandro; Kronenberg, Andreas (2019). Attributable deaths and disability-adjusted life-years caused by infections with antibiotic-resistant bacteria in Switzerland. Lancet infectious diseases, 19(1), pp. 17-18. Elsevier 10.1016/S1473-3099(18)30708-4
Allemann, Aurélie; Krämer, Julia G.; Korten, Insa; Ramsey, Kathryn; Casaulta, Carmen; Wüthrich, Daniel; Ramette, Alban Nicolas; Endimiani, Andrea; Latzin, Philipp; Hilty, Markus (2019). Nasal Resistome Development in Infants With Cystic Fibrosis in the First Year of Life. Frontiers in Microbiology, 10(212), p. 212. Frontiers 10.3389/fmicb.2019.00212
Endimiani, Andrea (2019). Carbapenemase-producing Enterobacteriaceae in humans (Unpublished). In: One Health meets Whole genome sequencing. Lucerne. 21.05.2019.
Endimiani, Andrea (2019). Extended-Spectrum Cephalosporin- and Colistin-Resistant E. coli in Tanzania: High Prevalence of Gut Colonization in Healthy People and Chicken Meat Contamination (Unpublished). In: Microbe. San Francisco, USA. 19-24 June, 2019.
Clausen, Frederik Banch; Barrett, Angela Natalie (2019). Noninvasive fetal RHD genotyping to guide targeted anti-D prophylaxis-an external quality assessment workshop. Vox sanguinis, 114(4), pp. 386-393. Wiley-Blackwell 10.1111/vox.12768
Prudent, Michel; Tissot, Jean-Daniel; Fontana, Stefano; Niederhauser, Christoph (2019). Editorial: Transfusion Medicine and Blood. Frontiers in medicine, 5, p. 355. Frontiers 10.3389/fmed.2018.00355
Erni, Silvia T.; Fernandes, Gabriella; Buri, Michelle; Perny, Michael; Rutten, Rolf Jan; van Noort, Johannes M; Senn, Pascal; Grandgirard, Denis; Roccio, Marta; Leib, Stephen (2019). Anti-inflammatory and Oto-Protective Effect of the Small Heat Shock Protein Alpha B-Crystallin (HspB5) in Experimental Pneumococcal Meningitis. Frontiers in neurology, 10(570), p. 570. Frontiers Media S.A. 10.3389/fneur.2019.00570
Nasher, Fauzy Negiub Ali; Aguilar, Fernando; Aebi, Susanne; Hermans, Peter WM; Heller, Manfred; Hathaway, Lucy Jane (2018). Peptide Ligands of AmiA, AliA, and AliB Proteins Determine Pneumococcal Phenotype. Frontiers in Microbiology, 9(3013) Frontiers 10.3389/fmicb.2018.03013
Sendi, Parham; Müller, Andreas M; Berbari, Elie (2018). Are All Joints Equal? Synovial Fluid Analysis in Periprosthetic Joint Infection. Journal of bone and joint infection, 3(5), pp. 258-259. Ivyspring International Publisher 10.7150/jbji.30491
Egli, Adrian; Blanc, Dominique S; Greub, Gilbert; Keller, Peter Michael; Lazarevic, Vladimir; Lebrand, Aitana; Leib, Stephen; Neher, Richard A; Perreten, Vincent; Ramette, Alban; Schrenzel, Jacques; Stephan, Roger; Wagner, Karolin; Wuethrich, Daniel; Xenarios, Ioannis (2018). Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform. Swiss medical weekly, 148(w14693), w14693. EMH Media 10.4414/smw.2018.14693
Principe, Luigi; Viaggi, Valentina; Clément, Mathieu; Meroni, Elisa; Pini, Beatrice; Endimiani, Andrea; Luzzaro, Francesco (2018). Emergence of CTX-M-1-producing Salmonella enterica serovar Napoli: a novel "enzyme-pathogen association" in the Italian ESBL endemic context. Journal of global antimicrobial resistance, 15, pp. 101-102. Elsevier 10.1016/j.jgar.2018.08.023
Gasser, Michael; Schrenzel, J; Kronenberg, Andreas Oskar (2018). Aktuelle Entwicklung der Antibiotikaresistenzen in der Schweiz. Swiss Medical Forum, 18(46), pp. 943-949. EMH Swiss Medical Publishers 10.4414/smf.2018.03404
Buetti, Niccolò Ivo Marco-Aurelio; Lo Priore, Elia Francesco; Sommerstein, Rami; Atkinson, Andrew; Kronenberg, Andreas Oskar; Marschall, Jonas (2018). Epidemiology of subsequent bloodstream infections in the ICU. Critical care, 22(1), p. 259. BioMed Central 10.1186/s13054-018-2148-0
Meier, Rahel; Wirth, Thomas; Vögelin, Esther; Sendi, Parham (2018). Characteristics and Outcome of Twenty-Nine Implant-Related Infections of the Hand and Fingers: Results from a Twelve-Year Observational Study. Surgical infections, 19(7), pp. 729-734. Mary Ann Liebert 10.1089/sur.2018.133
Uchimura, Yasuhiro; Fuhrer, Tobias; Li, Hai; Lawson, Melissa A.; Zimmermann, Michael; Yilmaz, Bahtiyar; Zindel, Joel; Ronchi, Francesca; Sorribas Olivera, Marcel; Hapfelmeier, Siegfried; Ganal-Vonarburg, Stephanie C.; Gomez de Agüero, Mercedes; McCoy, Kathleen D.; Sauer, Uwe; Macpherson, Andrew J. (2018). Antibodies Set Boundaries Limiting Microbial Metabolite Penetration and the Resultant Mammalian Host Response. Immunity, 49(3), 545-559.e5. Cell Press 10.1016/j.immuni.2018.08.004
van der Hoek, Lia; Verschoor, Ernst; Beer, Martin; Höper, Dirk; Wernike, Kerstin; Van Ranst, Marc; Matthijnssens, Jelle; Maes, Piet; Sastre, Patricia; Rueda, Paloma; Drexler, Jan Felix; Barr, John; Edwards, Thomas; Millner, Paul; Vermeij, Paul; de Groof, Ad; Thiel, Volker; Dijkman, Ronald; Suter, Franziska Marta; Leib, Stephen; ... (2018). Host switching pathogens, infectious outbreaks and zoonosis: A Marie Skłodowska-Curie innovative training network (HONOURs). Virus research, 257, pp. 120-124. Elsevier 10.1016/j.virusres.2018.09.002
Donà, Valentina; Smid, Joost H; Kasraian, Sara; Egli-Gany, Dianne; Dost, Ferah; Imeri, Fatime; Unemo, Magnus; Low, Nicola; Endimiani, Andrea (2018). Mismatch Amplification Mutation Assay (MAMA)-Based Real-Time PCR for Rapid Detection of and Antimicrobial Resistance Determinants in Clinical Specimens. Journal of clinical microbiology, 56(9), e00365-18. American Society for Microbiology 10.1128/JCM.00365-18
Muri, Lukas; Grandgirard, Denis; Buri, Michelle; Perny, Michael; Leib, Stephen (2018). Combined effect of non-bacteriolytic antibiotic and inhibition of matrix metalloproteinases prevents brain injury and preserves learning, memory and hearing function in experimental paediatric pneumococcal meningitis. Journal of neuroinflammation, 15(1), p. 233. BioMed Central 10.1186/s12974-018-1272-8
Niederhauser, Christoph; Widmer, Nadja; Hotz, Magdalena; Tinguely, Caroline; Fontana, Stefano; Allemann, Gabrielle; Borri, Mauro; Infanti, Laura; Sarraj, Amira; Sigle, Jörg; Stalder, Michèle; Thierbach, Jutta; Waldvogel, Sophie; Wiengand, Tina; Züger, Max; Gowland, Peter (2018). Current hepatitis E virus seroprevalence in Swiss blood donors and apparent decline from 1997 to 2016. Eurosurveillance, 23(35) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2018.23.35.1700616
Mika, Moana; Nita, Izabela Magdalena; Morf, Laura Ursina; Qi, Weihong; Beyeler, Seraina Martina; Bernasconi, Eric; Marsland, Benjamin J; Ott, Sebastian Robert; von Garnier, Christophe; Hilty, Markus (2018). Microbial and host immune factors as drivers of COPD. ERJ Open Research, 4(3) European Respiratory Society 10.1183/23120541.00015-2018
Collineau, Lucie; Gomes do Carmo, Luis Pedro; Endimiani, Andrea; Magouras, Ioannis; Müntener, Cedric; Schüpbach, Gertraud; Stärk, Katharina D C (2018). Risk Ranking of Antimicrobial-Resistant Hazards Found in Meat in Switzerland. Risk analysis, 38(5), pp. 1070-1084. Blackwell Publishing 10.1111/risa.12901
Bernasconi, Odette Joëlle; Donà, Valentina; Do Couto Pires, Joao Pedro; Kuenzli, Esther; Christoph, Hatz; Luzzaro, Francesco; Perreten, Vincent; Endimiani, Andrea (2018). Deciphering the Complete Deletion of the MgrB Locus in an Unusual Colistin-Resistant Klebsiella pneumoniae Colonizing the Gut of a Traveler Returning from India. International journal of antimicrobial agents, 51(3), pp. 529-531. Elsevier 10.1016/j.ijantimicag.2017.09.014
Chanchaithong, Pattrarat; Prapasarakul, Nuvee; Sirisopit Mehl, Nicole; Suanpairintr, Nipattra; Teankum, Komkrich; Collaud, Alexandra; Endimiani, Andrea; Perreten, Vincent (2018). Extensively drug-resistant community-acquired Acinetobacter baumannii sequence type 2 in a dog with urinary tract infection in Thailand. Journal of global antimicrobial resistance, 13, pp. 33-34. Elsevier 10.1016/j.jgar.2018.02.007
Uster, Stephanie Sarah; Matos Coelho, Fernanda; Aeberli, Daniel; Stein, Jens Volker; Hofstetter, Wilhelm; Engelhardt, Britta; Seitz, Michael (2018). TNFα blockade mediates bone protection in antigen-induced arthritis by reducing osteoclast precursor supply. Bone, 107, pp. 56-65. Elsevier 10.1016/j.bone.2017.10.020
Nasher, Fauzy Negiub Ali; Heller, Manfred; Hathaway, Lucy Jane (2018). Streptococcus pneumoniae proteins AmiA, AliA, and AliB bind peptides found in ribosomal proteins of other bacterial species. Frontiers in Microbiology, 8(2688) Frontiers 10.3389/fmicb.2017.02688
Ruppen, Corinne; Notter, Julia; Strahm, Carol; Sonderegger, Beat; Sendi, Parham (2018). Osteoarticular and skin and soft-tissue infections caused by Streptococcus agalactiae in elderly patients are frequently associated with bacteremia. Diagnostic microbiology and infectious disease, 90(1), pp. 55-57. Elsevier 10.1016/j.diagmicrobio.2017.09.008
Bernasconi, Odette Joëlle; Donà, Valentina; Tinguely, Regula; Endimiani, Andrea (2018). In Vitro Activity of 3 Commercial Bacteriophage Cocktails Against Salmonella and Shigella spp. Isolates of Human Origin. Pathogens and Immunity, 3(1), pp. 72-81. Case Western Reserve University, Cleveland, OH 10.20411/pai.v3i1.234
Clément, Mathieu; Büdel, Thomas; Bernasconi, Odette Joëlle; Principe, Luigi; Perreten, Vincent; Luzzaro, Francesco; Endimiani, Andrea (2018). The EDTA-based disk-combination tests are unreliable for the detection of MCR-mediated colistin-resistance in Enterobacteriaceae. Journal of microbiological methods, 153, pp. 31-34. Elsevier 10.1016/j.mimet.2018.08.008
Ruppen, Corinne; Mercier, Thomas; Grandgirard, Denis; Leib, Stephen; El Haj, Cristina; Murillo, Oscar; Decosterd, Laurent; Sendi, Parham (2018). Is Penicillin Plus Gentamicin Synergistic Against Sessile Group B Streptococcal Isolates? An Study With an Experimental Model of Foreign-Body Infection. Frontiers in Microbiology, 9, p. 919. Frontiers 10.3389/fmicb.2018.00919
Clément, Mathieu; Ramette, Alban; Bernasconi, Odette J.; Principe, Luigi; Luzzaro, Francesco; Endimiani, Andrea (2018). Whole-Genome Sequence of the First Extended-Spectrum β-Lactamase-Producing Strain of Salmonella enterica subsp. enterica Serovar Napoli. Microbiology resource announcements, 7(10) American Society for Microbiology 10.1128/MRA.00973-18
Endimiani, Andrea (2018). Epidemiology of Carbapenemases: Where Are We? - Carbapenemase Producers: Epidemiology in Travelers and Community-Associated Infections (Unpublished). In: ASM Microbe. Atlanta. 7-11 June, 2018.
Mellors, Theodore R; Rees, Christiaan A; Franchina, Flavio A; Burklund, Alison; Patel, Chaya; Hathaway, Lucy Jane; Hill, Jane E (2018). The volatile molecular profiles of seven Streptococcus pneumoniae serotypes. Journal of chromatography. B - analytical technologies in the biomedical and life sciences, 1096, pp. 208-213. Elsevier 10.1016/j.jchromb.2018.08.032
Lenz, Nicole; Engler, Olivier; Grandgirard, Denis; Leib, Stephen L.; Ackermann-Gäumann, Rahel (2018). Evaluation of antivirals against tick-borne encephalitis virus in organotypic brain slices of rat cerebellum. PLoS ONE, 13(10), e0205294. Public Library of Science 10.1371/journal.pone.0205294
Oechslin, Corinne Pia; Lenz, Nicole; Liechti, Nicole; Ryter, Sarah; Agyeman, Philipp; Bruggmann, Rémy; Leib, Stephen; Beuret, Christian M (2018). Limited Correlation of Shotgun Metagenomics Following Host Depletion and Routine Diagnostics for Viruses and Bacteria in Low Concentrated Surrogate and Clinical Samples. Frontiers in cellular and infection microbiology, 8(375), p. 375. Frontiers 10.3389/fcimb.2018.00375
Molari, Massimiliano; Guilini, Katja; Lott, Christian; Weber, Miriam; de Beer, Dirk; Meyer, Stefanie; Ramette, Alban; Wegener, Gunter; Wenzhöfer, Frank; Martin, Daniel; Cibic, Tamara; De Vittor, Cinzia; Vanreusel, Ann; Boetius, Antje (2018). CO2 leakage alters biogeochemical and ecological functions of submarine sands. Science Advances, 4(2), eaao2040. American Association for the Advancement of Science 10.1126/sciadv.aao2040
Müllhaupt, Beat; Niederhauser, Christoph (2018). Hepatitis E blood donor screening – More than a mere drop in the ocean? Journal of hepatology, 69(1), pp. 8-10. Elsevier 10.1016/j.jhep.2018.04.007
Niederhauser, Christoph (2018). [Transfusion-transmitted Infections: How Useful and Costly is Testing for new Infectious Disease Pathogens?]. Praxis, 107(9-10), pp. 521-529. Hogrefe 10.1024/1661-8157/a002967
Krämer, Julia; Do Couto Pires, Joao Pedro; Küffer, Marianne; Semaani, Eulalia; Endimiani, Andrea; Hilty, Markus; Oppliger, Anne (2017). Prevalence of extended-spectrum β-lactamase-producing Enterobacteriaceae and Methicillin-Resistant Staphylococcus aureus in pig farms in Switzerland. The Science of the total environment, 603-604, pp. 401-405. Elsevier 10.1016/j.scitotenv.2017.06.110
Abraha, Million; Bertisch, Barbara; Hauser, Christoph; Klutschke, Michael; Egli-Gany, Dianne; Smid, Joost; Unemo, Magnus; Endimiani, Andrea; Donà, Valentina; Furrer, Hansjakob; Low, Nicola; Kasraian Fard, Sara (23 November 2017). Factors associated with anitmicrobial resistant gonorrheoea infections in men who have sex with men in Switzerland: case control study. In: Swiss Public Health Conference 2017. Congress Center Basel. 22 - 23 Nov 2017.
Ruppen, Corinne; Fröhlicher, Simone; Sendi, Parham (2017). Gentamicin susceptibility of 567 clinical group B streptococcal isolates. Journal of global antimicrobial resistance, 10, pp. 304-305. Elsevier 10.1016/j.jgar.2017.07.005
Donà, Valentina; Bernasconi, Odette Joëlle; Do Couto Pires, Joao Pedro; Collaud, Alexandra; Overesch, Gudrun; Ramette, Alban Nicolas; Perreten, Vincent; Endimiani, Andrea (2017). Heterogeneous Genetic Location of mcr-1 in Colistin-Resistant Escherichia coli Isolated from Humans and Retail Chicken Meat in Switzerland: Emergence of mcr-1-Carrying IncK2 Plasmids. Antimicrobial agents and chemotherapy, 61(11) American Society for Microbiology 10.1128/AAC.01245-17
Ruppen, Corinne; Rasmussen, Magnus; Casanova, Carlo; Sendi, Parham (2017). A 10-year observational study of Streptococcus dysgalactiae bacteraemia in adults: frequent occurrence among female intravenous drug users. Swiss medical weekly, 147(w14469), w14469. EMH Schweizerischer Ärzteverlag 10.4414/smw.2017.14469
Mika, Moana; Maurer, Josua; Korten, Insa Christina Severine; Allemann, Aurélie; Aebi, Suzanne; Brugger, Silvio D; Qi, Weihong; Frey, Urs; Latzin, Philipp; Hilty, Markus (2017). Influence of the pneumococcal conjugate vaccines on the temporal variation of pneumococcal carriage and the nasal microbiota in healthy infants: a longitudinal analysis of a case-control study. Microbiome, 5(1), p. 85. BioMed Central 10.1186/s40168-017-0302-6
Perny, Michael; Solyga, Magdalena; Grandgirard, Denis; Roccio, Marta; Leib, Stephen; Senn, Pascal (2017). Streptococcus pneumoniae-induced ototoxicity in organ of Corti explant cultures. Hearing research, 350, pp. 100-109. Elsevier 10.1016/j.heares.2017.04.012
Lora-Tamayo, Jaime; Senneville, Éric; Ribera, Alba; Bernard, Louis; Dupon, Michel; Zeller, Valérie; Li, Ho Kwong; Arvieux, Cédric; Clauss, Martin; Uçkay, Ilker; Vigante, Dace; Ferry, Tristan; Iribarren, José Antonio; Peel, Trisha N; Sendi, Parham; Miksic, Nina Gorišek; Rodríguez-Pardo, Dolors; Del Toro, María Dolores; Fernández-Sampedro, Marta; Dapunt, Ulrike; ... (2017). The Not-So-Good Prognosis of Streptococcal Periprosthetic Joint Infection Managed by Implant Retention: The Results of a Large Multicenter Study. Clinical infectious diseases, 64(12), pp. 1742-1752. Oxford University Press 10.1093/cid/cix227
Buschor, Stefanie; Cuenca Vera, Miguelangel; Uster, Stephanie Sarah; Schären, Olivier; Balmer, Maria L; Terrazos Miani, Miguel Angel; Schürch, Christian M; Hapfelmeier, Siegfried Hektor (2017). Innate immunity restricts Citrobacter rodentium A/E pathogenesis initiation to an early window of opportunity. PLoS pathogens, 13(6), e1006476. Public Library of Science 10.1371/journal.ppat.1006476
Schlapbach, Christoph; Sendi, Parham (2017). Serrated Marine Nose. New England journal of medicine NEJM, 376(3), p. 267. Massachusetts Medical Society MMS 10.1056/NEJMicm1604459
Jenkinson, Stephen P.; Grandgirard, Denis; Heidemann, Martina; Tscherter, Anne; Avondet, Marc-André; Leib, Stephen (2017). Embryonic Stem Cell-Derived Neurons Grown on Multi-Electrode Arrays as a Novel In vitro Bioassay for the Detection of Clostridium botulinum Neurotoxins. Frontiers in Pharmacology, 8(73) Frontiers 10.3389/fphar.2017.00073
Sendi, Parham; Hirzel, Cédric; Pfister, Stefan; Ackermann-Gäumann, Rahel; Grandgirard, Denis; Hewer, Ekkehard; Nirkko, Arto Christian (2017). Fatal Outcome of Tick-borne Encephalitis after Vaccine Failure. Frontiers in neurology, 8(119), p. 119. Frontiers Media S.A. 10.3389/fneur.2017.00119
Sendi, Parham; Borens, Olivier; Wahl, Peter; Clauss, Martin; Uçkay, Ilker (2017). Management of Asymptomatic Bacteriuria, Urinary Catheters and Symptomatic Urinary Tract Infections in Patients Undergoing Surgery for Joint Replacement: A Position Paper of the Expert Group 'Infection' of swissorthopaedics. Journal of bone and joint infection, 2(3), pp. 154-159. Ivyspring International Publisher 10.7150/jbji.20425
Oechslin, Corinne P.; Heutschi, Daniel; Lenz, Nicole; Tischhauser, Werner; Péter, Olivier; Rais, Olivier; Beuret, Christian M.; Leib, Stephen; Bankoul, Sergei; Ackermann-Gäumann, Rahel (2017). Prevalence of tick-borne pathogens in questing Ixodes ricinus ticks in urban and suburban areas of Switzerland. Parasites & Vectors, 10(1), p. 558. BioMed Central 10.1186/s13071-017-2500-2
Hotchen, Andrew J; McNally, Martin A; Sendi, Parham (2017). The Classification of Long Bone Osteomyelitis: A Systemic Review of the Literature. Journal of bone and joint infection, 2(4), pp. 167-174. Ivyspring International Publisher 10.7150/jbji.21050
Alexanian, Michael; Maric, Daniel; Jenkinson, Stephen Philip; Mina, Marco; Friedman, Clayton E.; Ting, Ching-Chia; Micheletti, Rudi; Plaisance, Isabelle; Nemir, Mohamed; Maison, Damien; Kernen, Jasmin; Pezzuto, Iole; Villeneuve, Dominic; Burdet, Frédéric; Ibberson, Mark; Leib, Stephen; Palpant, Nathan J.; Hernandez, Nouria; Ounzain, Samir and Pedrazzini, Thierry (2017). A transcribed enhancer dictates mesendoderm specification in pluripotency. Nature communications, 8(1), p. 1806. Nature Publishing Group 10.1038/s41467-017-01804-w
Agyeman, Philipp; Grandgirard, Denis; Leib, Stephen (2017). Neuroinflammation in Bacterial Meningitis. In: Lyck, R; Enzmann, G (eds.) The Blood Brain Barrier and Inflammation. Progress in Inflammation Research (pp. 213-252). Springer Nature 10.1007/978-3-319-45514-3_10
Jessen, Gerdhard L.; Lichtschlag, Anna; Ramette, Alban; Pantoja, Silvio; Rossel, Pamela E.; Schubert, Carsten J.; Struck, Ulrich; Boetius, Antje (2017). Hypoxia causes preservation of labile organic matter and changes seafloor microbial community composition (Black Sea). Science Advances, 3(2), e1601897. American Association for the Advancement of Science 10.1126/sciadv.1601897
Brugger, Silvio; Troxler, Lukas; Rüfenacht, Susanne; Frey, Pascal Marcel; Morand, Brigitte; Geyer, Rudolf; Mühlemann, Kathrin; Höck, Stefan; Thormann, Wolfgang; Furrer, Julien; Christen, Stephan; Hilty, Markus (2016). Polysaccharide capsule composition of pneumococcal serotype 19A subtypes: Unaltered among subtypes and independent of the nutritional environment. Infection and immunity, 84(11), pp. 3152-3160. American Society for Microbiology 10.1128/IAI.00474-16
Perny, Michael; Roccio, Marta; Grandgirard, Denis; Solyga, Magdalena; Senn, Pascal; Leib, Stephen (2016). The Severity of Infection Determines the Localization of Damage and Extent of Sensorineural Hearing Loss in Experimental Pneumococcal Meningitis. Journal of neuroscience, 36(29), pp. 7740-7749. Society for Neuroscience 10.1523/JNEUROSCI.0554-16.2016
Curiao, Tânia; Marchi, Emmanuela; Grandgirard, Denis; León-Sampedro, Ricardo; Viti, Carlo; Leib, Stephen; Baquero, Fernando; Oggioni, Marco R; Martinez, José Luis; Coque, Teresa M (2016). Multiple adaptive routes of Salmonella enterica Typhimurium to biocide and antibiotic exposure. BMC Genomics, 17(491), p. 491. BioMed Central 10.1186/s12864-016-2778-z
Balmer, Maria Luisa; Ma, Eric H; Bantug, Glenn R; Grählert, Jasmin; Pfister, Simona; Glatter, Timo; Jauch, Annaïse; Dimeloe, Sarah; Slack, Emma; Dehio, Philippe; Krzyzaniak, Magdalena A; King, Carolyn G; Burgener, Anne-Valérie; Fischer, Marco; Develioglu, Leyla; Belle, Réka; Recher, Mike; Bonilla, Weldy V; Macpherson, Andrew; Hapfelmeier, Siegfried Hektor; ... (2016). Memory CD8(+) T Cells Require Increased Concentrations of Acetate Induced by Stress for Optimal Function. Immunity, 44(6), pp. 1312-1324. Cell Press 10.1016/j.immuni.2016.03.016
van de Beek, D; Cabellos, C; Dzupova, O; Esposito, S; Klein, M; Kloek, A T; Leib, Stephen; Mourvillier, B; Ostergaard, C; Pagliano, P; Pfister, H W; Read, R C; Sipahi, O Resat; Brouwer, M C (2016). ESCMID guideline: diagnosis and treatment of acute bacterial meningitis. Clinical microbiology and infection, 22(Suppl 3), S37-S62. Blackwell Publishing 10.1016/j.cmi.2016.01.007
Gomez de Agüero Tamargo, Maria de la Mercedes; Ganal-Vonarburg, Stephanie C; Fuhrer, Tobias; Rupp, Sandra Carina; Uchimura, Yasuhiro; Li, Hai; Steinert, Anna; Heikenwalder, Mathias; Hapfelmeier, Siegfried Hektor; Sauer, Uwe; McCoy, Kathleen; Macpherson, Andrew (2016). The maternal microbiota drives early postnatal innate immune development. Science, 351(6279), pp. 1296-1302. American Association for the Advancement of Science 10.1126/science.aad2571
Fernández-López, David; Faustino, Joel; Klibanov, Alexander L; Derugin, Nikita; Blanchard, Elodie; Simon, Franziska; Leib, Stephen; Vexler, Zinaida S (2016). Microglial Cells Prevent Hemorrhage in Neonatal Focal Arterial Stroke. Journal of neuroscience, 36(10), pp. 2881-2893. Society for Neuroscience 10.1523/JNEUROSCI.0140-15.2016
Bürki, Sarah Elisabeth; Grandgirard, Denis; Datta, Alexandre N; Hackenberg, Annette; Martin, Florence; Schmitt-Mechelke, Thomas; Leib, Stephen L; Steinlin, Maja (2016). Inflammatory markers in pediatric stroke: An attempt to better understanding the pathophysiology. European journal of paediatric neurology, 20(2), pp. 252-260. Elsevier 10.1016/j.ejpn.2015.12.006
Bally, Lia; Grandgirard, Denis; Leib, Stephen (2016). Inhibition of Hippocampal Regeneration by Adjuvant Dexamethasone in Experimental Infant Rat Pneumococcal Meningitis. Antimicrobial agents and chemotherapy, 60(3), pp. 1841-1846. American Society for Microbiology 10.1128/AAC.02429-15
Hathaway, Lucy Jane; Grandgirard, Denis; Valente, Luca Gabriele; Täuber, Martin G.; Leib, Stephen (2016). Streptococcus pneumoniae capsule determines disease severity in experimental pneumococcal meningitis. Open Biology, 6(3) The Royal Society Publishing 10.1098/rsob.150269
Zürcher, Patrick; Springe, Dirk; Grandgirard, Denis; Leib, Stephen; Grossholz, Marius; Jakob, Stephan; Takala, Jukka; Hänggi, Matthias (2016). A randomized trial of the effects of the noble gases helium and argon on neuroprotection in a rodent cardiac arrest model. BMC neurology, 16, p. 43. BioMed Central 10.1186/s12883-016-0565-8
Baumgartner, Denja; Aebi, Susanne; Grandgirard, Denis; Leib, Stephen; Draeger, Annette; Babiychuk, Eduard; Hathaway, Lucy Jane (2016). Clinical Streptococcus pneumoniae isolates induce differing CXCL8 responses from human nasopharyngeal epithelial cells which are reduced by liposomes. BMC microbiology, 16(1), p. 154. BioMed Central 10.1186/s12866-016-0777-5
Cuenca Vera, Miguelangel; Pfister, Simona; Buschor, Stefanie; Bayramova, Firuza; Hernandez, Sara B.; Cava, Felipe; Kuru, Erkin; Van Nieuwenhze, Michael S.; Brun, Yves V.; Matos Coelho, Fernanda; Hapfelmeier, Siegfried Hektor (2016). D-Alanine-Controlled Transient Intestinal Mono-Colonization with Non-Laboratory-Adapted Commensal E. coli Strain HS. PLoS ONE, 11(3), e0151872. Public Library of Science 10.1371/journal.pone.0151872
Moor, Kathrin; Wotzka, Sandra Y; Toska, Albulena; Diard, Médéric; Hapfelmeier, Siegfried Hektor; Slack, Emma (2016). Peracetic Acid Treatment Generates Potent Inactivated Oral Vaccines from a Broad Range of Culturable Bacterial Species. Frontiers in immunology, 7(34), p. 34. Frontiers Research Foundation 10.3389/fimmu.2016.00034
Studer, Nicolas; Desharnais, Lyne; Beutler, Markus; Brugiroux, Sandrine; Terrazos Miani, Miguel Angel; Menin, Laure; Schürch, Christian; McCoy, Kathy D.; Kuehne, Sarah A.; Minton, Nigel P.; Stecher, Bärbel; Bernier-Latmani, Rizlan; Hapfelmeier, Siegfried Hektor (2016). Functional Intestinal Bile Acid 7α-Dehydroxylation by Clostridium scindens Associated with Protection from Clostridium difficile Infection in a Gnotobiotic Mouse Model. Frontiers in cellular and infection microbiology, 6(191), p. 191. Frontiers 10.3389/fcimb.2016.00191
Chevalier, Claire; Stojanović, Ozren; Colin, Didier J; Suarez-Zamorano, Nicolas; Tarallo, Valentina; Veyrat-Durebex, Christelle; Rigo, Dorothée; Fabbiano, Salvatore; Stevanović, Ana; Hagemann, Stefanie Claudia; Montet, Xavier; Seimbille, Yann; Zamboni, Nicola; Hapfelmeier, Siegfried Hektor; Trajkovski, Mirko (2015). Gut Microbiota Orchestrates Energy Homeostasis during Cold. Cell, 163(6), pp. 1360-1374. Cell Press 10.1016/j.cell.2015.11.004
Suárez-Zamorano, Nicolas; Fabbiano, Salvatore; Chevalier, Claire; Stojanović, Ozren; Colin, Didier J; Stevanović, Ana; Veyrat-Durebex, Christelle; Tarallo, Valentina; Rigo, Dorothée; Germain, Stéphane; Ilievska, Miroslava; Montet, Xavier; Seimbille, Yann; Hapfelmeier, Siegfried Hektor; Trajkovski, Mirko (2015). Microbiota depletion promotes browning of white adipose tissue and reduces obesity. Nature medicine, 21(12), pp. 1497-1501. Nature Publishing Group 10.1038/nm.3994
Frick, Tamara; Springe, Dirk; Grandgirard, Denis; Leib, Stephen; Hänggi, Matthias (2015). An improved simple rat model for global cerebral ischaemia by induced cardiac arrest. Neurological research, 38(4), pp. 373-380. Maney 10.1179/1743132815Y.0000000090
Liechti, Fabian D; Grandgirard, Denis; Leib, Stephen (2015). Bacterial meningitis: insights into pathogenesis and evaluation of new treatment options: a perspective from experimental studies. Future microbiology, 10(7), pp. 1195-1213. Future Medicine 10.2217/fmb.15.43
Liechti, F D; Grandgirard, Denis; Leib, Stephen (2015). The antidepressant fluoxetine protects the hippocampus from brain damage in experimental pneumococcal meningitis. Neuroscience, 297, pp. 89-94. Elsevier 10.1016/j.neuroscience.2015.03.056
Grandgirard, Denis; Furi, Leonardo; Ciusa, Maria Laura; Baldassarri, Lucilla; Knight, Daniel R; Morrissey, Ian; Largiadèr, Carlo Rodolfo; Leib, Stephen; Oggioni, Marco R (2015). Mutations upstream of fabI in triclosan resistant Staphylococcus aureus strains are associated with elevated fabI gene expression. BMC Genomics, 16(345), p. 345. BioMed Central 10.1186/s12864-015-1544-y
Wang, Junhua; Vuitton, Dominique A; Müller, Norbert; Hemphill, Andrew; Spiliotis, Markus; Blagosklonov, Oleg; Grandgirard, Denis; Leib, Stephen; Shalev, Itay; Levy, Gary; Lu, Xiaomei; Lin, Renyong; Wen, Hao; Gottstein, Bruno (2015). Deletion of Fibrinogen-like Protein 2 (FGL-2), a Novel CD4+ CD25+ Treg Effector Molecule, Leads to Improved Control of Echinococcus multilocularis Infection in Mice. PLoS neglected tropical diseases, 9(5), e0003755. Public Library of Science 10.1371/journal.pntd.0003755
Spaniol, Violeta; Bernhard, Sara; Aebi, Christoph (2015). Moraxella catarrhalis AcrAB-OprM efflux pump contributes to antimicrobial resistance and is enhanced during cold shock response. Antimicrobial agents and chemotherapy, 59(4), pp. 1886-1894. American Society for Microbiology 10.1128/AAC.03727-14
Bendel, Stepani; Springe, Dirk; Pereira, Adriano José; Grandgirard, Denis; Leib, Stephen; Putzu, Alessandro; Schlickeiser, Jannis; Jakob, Stephan M.; Takala, Jukka; Hänggi, Matthias (2015). Do different anesthesia regimes affect hippocampal apoptosis and neurologic deficits in a rodent cardiac arrest model? BMC anesthesiology, 15(2), p. 2. BioMed Central 10.1186/1471-2253-15-2
Liechti, Fabian D; Bächtold, Fabian; Grandgirard, Denis; Leppert, David; Leib, Stephen (2015). The matrix metalloproteinase inhibitor RS-130830 attenuates brain injury in experimental pneumococcal meningitis. Journal of neuroinflammation, 12(43), p. 43. BioMed Central 10.1186/s12974-015-0257-0
Pop Ristova, Petra; Wenzhöfer, Frank; Ramette, Alban; Felden, Janine; Boetius, Antje (2015). Spatial scales of bacterial community diversity at cold seeps (Eastern Mediterranean Sea). The ISME journal, 9(6), pp. 1306-1318. Nature Publishing Group 10.1038/ismej.2014.217
Ricci, Susanna; Grandgirard, Denis; Wenzel, Michael; Braccini, Tiziana; Salvatore, Paola; Oggioni, Marco R; Leib, Stephen; Koedel, Uwe (2014). Inhibition of matrix metalloproteinases attenuates brain damage in experimental meningococcal meningitis. BMC infectious diseases, 14(726), p. 726. BioMed Central 10.1186/s12879-014-0726-6
Hilty, Markus; Wüthrich, Daniel; Salter, Susannah J; Engel, Hans Jürg; Campbell, Samuel; Sá-Leão, Raquel; de Lencastre, Hermínia; Hermans, Peter; Sadowy, Ewa; Turner, Paul; Chewapreecha, Claire; Diggle, Mathew; Pluschke, Gerd; McGee, Lesley; Eser, Ozgen Köseoğlu; Low, Donald E; Smith-Vaughan, Heidi; Endimiani, Andrea; Küffer, Marianne; Dupasquier, Mélanie; ... (2014). Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages. Genome biology and evolution, 6(12), pp. 3281-3294. Oxford University Press 10.1093/gbe/evu263
Maffioli, Carola; Grandgirard, Denis; Engler, Olivier; Leib, Stephen (2014). A tick-borne encephalitis model in infant rats infected with langat virus. Journal of neuropathology and experimental neurology, 73(12), pp. 1107-1115. Lippincott Williams & Wilkins 10.1097/NEN.0000000000000131
Balmer, Maria L; Schürch, Christian; Saito, Yasuyuki; Geuking, Markus; Li, Hai; Cuenca, Miguelangel; Kovtonyuk, Larisa V; McCoy, Kathleen; Hapfelmeier, Siegfried; Ochsenbein, Adrian; Manz, Markus G; Slack, Emma; Macpherson, Andrew (2014). Microbiota-derived compounds drive steady-state granulopoiesis via MyD88/TICAM signaling. Journal of immunology, 193(10), pp. 5273-5283. American Association of Immunologists 10.4049/jimmunol.1400762
Coutinho, Leonam G; Christen, Stephan; Bellac, Caroline L; Fontes, Fabrícia; de Souza, Fladjule; Grandgirard, Denis; Leib, Stephen; Agnez-Lima, Lucymara F (2014). The kynurenine pathway is involved in bacterial meningitis. Journal of neuroinflammation, 11(169), p. 169. BioMed Central 10.1186/s12974-014-0169-4
Schaffner, Thierry Oliver; Hinds, Jason; Gould, Katherine A; Wüthrich, Daniel; Bruggmann, Rémy; Küffer, Marianne; Mühlemann, Kathrin; Hilty, Markus; Hathaway, Lucy Jane (2014). A point mutation in cpsE renders Streptococcus pneumoniae nonencapsulated and enhances its growth, adherence and competence. BMC microbiology, 14(210), p. 210. BioMed Central 10.1186/s12866-014-0210-x
Meichtry, Jurka; Born, Rita; Küffer, Marianne; Zwahlen, Marcel; Albrich, Werner C.; Brugger, Silvio; Mühlemann, Kathrin; Hilty, Markus (2014). Serotype epidemiology of invasive pneumococcal disease in Swiss adults: A nationwide population-based study. Vaccine, 32(40), pp. 5185-5191. Elsevier 10.1016/j.vaccine.2014.07.060
Balmer, Maria Luisa; Slack, Emma; De Gottardi, Andrea; Lawson, Melissa; Hapfelmeier, Siegfried Hektor; Miele, Luca; Grieco, Antonio; Van Vlierberghe, Hans; Fahrner, René; Patuto, Nicola; Bernsmeier, Christine; Ronchi, Francesca; Wyss, Madeleine; Keogh-Stroka, Deborah M.; Dickgreber, Nina; Heim, Markus H; McCoy, Kathy D; Macpherson, Andrew (2014). The liver may act as a firewall mediating mutualism between the host and its gut commensal microbiota. Science translational medicine, 6(237), 237ra66. American Association for the Advancement of Science 10.1126/scitranslmed.3008618
Agyeman, Philipp; Grandgirard, Denis; Leib, Stephen (2014). Pathogenesis and Pathophysiology of Bacterial Infections. In: Scheld, Michael; Whitley, Richard J.; Marra, Christina M. (eds.) Infections of the Central Nervous System (pp. 341-364). Philadelphia, PA, USA: Lippincott Williams & Wilkins
Engel, Hans Jürg; Mika, Moana; Denapaite, Dalia; Hakenbeck, Regine; Mühlemann, Kathrin; Heller, Manfred; Hathaway, Lucy Jane; Hilty, Markus (2014). A low affinity penicillin-binding protein 2x is required for heteroresistance in Streptococcus pneumoniae. Antimicrobial agents and chemotherapy, 58(7), pp. 3934-3941. American Society for Microbiology 10.1128/AAC.02547-14
Liechti, Fabian D; Grandgirard, Denis; Leppert, David; Leib, Stephen (2014). Matrix metalloproteinase inhibition lowers mortality and brain injury in experimental pneumococcal meningitis. Infection and immunity, 82(4), pp. 1710-1718. American Society for Microbiology 10.1128/IAI.00073-14
Hirt-Minkowski, Patricia; Marti, Hans-Peter; Hönger, Gideon; Grandgirard, Denis; Leib, Stephen; Amico, Patrizia; Schaub, Stefan (2014). Correlation of serum and urinary matrix metalloproteases/tissue inhibitors of metalloproteases with subclinical allograft fibrosis in renal transplantation. Transplant immunology, 30(1), pp. 1-6. Elsevier 10.1016/j.trim.2013.11.004
Holler, Jon G.; Brandt, Christian T.; Leib, Stephen L.; Rowland, Ian J.; Ostergaard, Christian (2014). Increase in hippocampal water diffusion and volume during experimental pneumococcal meningitis is aggravated by bacteremia. BMC infectious diseases, 14(1), p. 240. BioMed Central 10.1186/1471-2334-14-240
Liechti, Fabian D; Stüdle, Nicolas; Theurillat, Regula; Grandgirard, Denis; Thormann, Wolfgang; Leib, Stephen (2014). The mood-stabilizer lithium prevents hippocampal apoptosis and improves spatial memory in experimental meningitis. PLoS ONE, 9(11), e113607. Public Library of Science 10.1371/journal.pone.0113607
Baranger, Kévin; Rivera, Santiago; Liechti, Fabian D; Grandgirard, Denis; Bigas, Judit; Seco, Jesús; Tarrago, Teresa; Leib, Stephen; Khrestchatisky, Michel (2014). Endogenous and synthetic MMP inhibitors in CNS physiopathology. In: Dityatev, Alexander; Wehrle-Haller, Bernhard; Pitkänen, Asla (eds.) Brain Extracellular Matrix in Health and Disease. Progress in Brain Research: Vol. 214 (pp. 313-351). Elsevier 10.1016/B978-0-444-63486-3.00014-1
Coutinho, Leonam G; Grandgirard, Denis; Leib, Stephen L.; Agnez-Lima, Lucymara F (2013). Cerebrospinal-fluid cytokine and chemokine profile in patients with pneumococcal and meningococcal meningitis. BMC infectious diseases, 13(1), p. 326. BioMed Central 10.1186/1471-2334-13-326
Spaniol, Violeta; Wyder, Stefan; Aebi, Christoph (2013). RNA-Seq-based analysis of the physiologic cold shock-induced changes in Moraxella catarrhalis gene expression. PLoS ONE, 8(7), e68298. Public Library of Science 10.1371/journal.pone.0068298
Monney, Thierry; Grandgirard, Denis; Leib, Stephen; Hemphill, Andrew (2013). Use of a Th1 Stimulator Adjuvant for Vaccination against Neospora caninum Infection in the Pregnant Mouse Model. Pathogens, 2(2), pp. 193-208. MDPI AG 10.3390/pathogens2020193
Grandgirard, Denis; Gäumann, Rahel; Coulibaly, Boubacar; Dangy, Jean-Pierre; Sie, Ali; Junghanss, Thomas; Schudel, Hans; Pluschke, Gerd; Leib, Stephen L. (2013). The causative pathogen determines the inflammatory profile in cerebrospinal fluid and outcome in patients with bacterial meningitis. Mediators of inflammation, 2013, p. 312476. Hindawi Publishing Corp. 10.1155/2013/312476
Fritz, Jörg H; Rojas, Olga Lucia; Simard, Nathalie; McCarthy, Douglas D; Hapfelmeier, Siegfried; Rubino, Stephen; Robertson, Susan J; Larijani, Mani; Gosselin, Jean; Ivanov, Ivaylo I; Martin, Alberto; Casellas, Rafael; Philpott, Dana J; Girardin, Stephen E; McCoy, Kathy D; Macpherson, Andrew J; Paige, Christopher J; Gommerman, Jennifer L (2012). Acquisition of a multifunctional IgA+ plasma cell phenotype in the gut. Nature, 481(7380), pp. 199-203. London: Macmillan Journals Ltd. 10.1038/nature10698
Monney, Thierry; Debache, Karim; Grandgirard, Denis; Leib, Stephen L.; Hemphill, Andrew (2012). Vaccination with the recombinant chimeric antigen recNcMIC3-1-R induces a non-protective Th2-type immune response in the pregnant mouse model for N. caninum infection. Vaccine, 30(46), pp. 6588-94. Amsterdam: Elsevier 10.1016/j.vaccine.2012.08.024
Slack, Emma; Balmer, Maria Luisa; Fritz, Jörg H; Hapfelmeier, Siegfried (2012). Functional flexibility of intestinal IgA - broadening the fine line. Frontiers in immunology, 3, p. 100. Lausanne: Frontiers Research Foundation 10.3389/fimmu.2012.00100
Macpherson, Andrew J; Geuking, Markus B; Slack, Emma; Hapfelmeier, Siegfried; McCoy, Kathy D (2012). The habitat, double life, citizenship, and forgetfulness of IgA. Immunological reviews, 245(1), pp. 132-146. Oxford: Wiley-Blackwell 10.1111/j.1600-065X.2011.01072.x
Lüer, Sonja; Troller, Rolf; Jetter, Marion; Spaniol, Violeta; Aebi, Christoph (2011). Topical curcumin can inhibit deleterious effects of upper respiratory tract bacteria on human oropharyngeal cells in vitro: potential role for patients with cancer therapy induced mucositis? Supportive care in cancer, 19(6), pp. 799-806. Berlin: Springer-Verlag 10.1007/s00520-010-0894-x
Sury, Matthias D.; Vorlet-Fawer, Lorianne; Agarinis, Claudia; Yousefi, Shida; Grandgirard, Denis; Leib, Stephen L.; Christen, Stephan (2011). Restoration of Akt activity by the bisperoxovanadium compound bpV(pic) attenuates hippocampal apoptosis in experimental neonatal pneumococcal meningitis. Neurobiology of disease, 41(1), pp. 201-208. Amsterdam: Elsevier 10.1016/j.nbd.2010.09.007
Geuking, Markus B; Cahenzli, Julia; Lawson, Melissa A E; Ng, Derek C K; Slack, Emma; Hapfelmeier, Siegfried; McCoy, Kathy D; Macpherson, Andrew J (2011). Intestinal bacterial colonization induces mutualistic regulatory T cell responses. Immunity, 34(5), pp. 794-806. Cambridge, Mass.: Cell Press 10.1016/j.immuni.2011.03.021
Woehrl, Bianca; Klein, Matthias; Grandgirard, Denis; Koedel, Uwe; Leib, Stephen (2011). Bacterial meningitis: current therapy and possible future treatment options. Expert review of anti-infective therapy, 9(11), pp. 1053-1065. London: Expert Reviews 10.1586/ERI.11.129
Hofer, Sandra; Grandgirard, Denis; Burri, Denise; Fröhlich, Tanja K.; Leib, Stephen L. (2011). Bacterial meningitis impairs hippocampal neurogenesis. Journal of neuropathology and experimental neurology, 70(10), pp. 890-899. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/NEN.0b013e3182303f31
Monney, Thierry; Rütti, David; Schorer, Michelle; Debache, Karim; Grandgirard, Denis; Leib, Stephen L.; Hemphill, Andrew (2011). RecNcMIC3-1-R is a microneme- and rhoptry-based chimeric antigen that protects against acute neosporosis and limits cerebral parasite load in the mouse model for Neospora caninum infection. Vaccine, 29(40), pp. 6967-6975. Amsterdam: Elsevier 10.1016/j.vaccine.2011.07.038
Blaser, Cornelia; Wittwer, Matthias; Grandgirard, Denis; Leib, Stephen L. (2011). Adjunctive dexamethasone affects the expression of genes related to inflammation, neurogenesis and apoptosis in infant rat pneumococcal meningitis. PLoS ONE, 6(3), e17840. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0017840
Margos, M.C.; Grandgirard, Denis; Leib, Stephen; Gottstein, Bruno (2011). In vitro induction of lymph node cell proliferation by mouse bone marrow dendritic cells following stimulation with different Echinococcus multilocularis antigens. Journal of helminthology, 85(2), pp. 128-137. Cambridge: Cambridge University Press 10.1017/S0022149X10000878
Spaniol, Violeta; Troller, Rolf; Schaller, André; Aebi, Christoph (2011). Physiologic cold shock of Moraxella catarrhalis affects the expression of genes involved in the iron acquisition, serum resistance and immune evasion. BMC microbiology, 11, p. 182. London: BioMed Central 10.1186/1471-2180-11-182
Barbier, François; Lebeaux, David; Hernandez, David; Delannoy, Anne-Sophie; Caro, Valérie; François, Patrice; Schrenzel, Jacques; Ruppé, Etienne; Gaillard, Kevin; Wolff, Michel; Brisse, Sylvain; Andremont, Antoine; Ruimy, Raymond (2011). High prevalence of the arginine catabolic mobile element in carriage isolates of methicillin-resistant Staphylococcus epidermidis. Journal of antimicrobial chemotherapy, 66(1), pp. 29-36. Oxford University Press 10.1093/jac/dkq410
Mégevand, C; Gervaix, A; Heininger, U; Berger, C; Aebi, C; Vaudaux, B; Kind, C; Gnehm, H-P; Hitzler, M; Renzi, G; Schrenzel, J; François, P (2010). Molecular epidemiology of the nasal colonization by methicillin-susceptible Staphylococcus aureus in Swiss children. Clinical microbiology and infection, 16(9), pp. 1414-20. Oxford: Blackwell Publishing 10.1111/j.1469-0691.2009.03090.x
Hapfelmeier, Siegfried; Macpherson, Andrew J. (2010). In remembrance of commensal intestinal microbes. Communicative & integrative biology, 3(6), pp. 569-571. Austin, Tex.: Landes Bioscience 10.4161/cib.3.6.13011
Jetter, Marion; Spaniol, Violeta; Troller, Rolf; Aebi, Christoph (2010). Down-regulation of porin M35 in Moraxella catarrhalis by aminopenicillins and environmental factors and its potential contribution to the mechanism of resistance to aminopenicillins. Journal of antimicrobial chemotherapy, 65(10), pp. 2089-96. Oxford: Oxford University Press 10.1093/jac/dkq312
Grandgirard, Denis; Leib, Stephen L. (2010). Meningitis in neonates: bench to bedside. Clinics in perinatology, 37(3), pp. 655-676. New York, N.Y.: Elsevier 10.1016/j.clp.2010.05.004
Wittwer, Matthias; Grandgirard, Denis; Rohrbach, Janine; Leib, Stephen L. (2010). Tracking the transcriptional host response from the acute to the regenerative phase of experimental pneumococcal meningitis. BMC infectious diseases, 10(176), p. 176. London: BioMed Central 10.1186/1471-2334-10-176
Blaser, Cornelia; Klein, Matthias; Grandgirard, Denis; Wittwer, Matthias; Peltola, Heikki; Weigand, Michael; Koedel, Uwe; Leib, Stephen L. (2010). Adjuvant glycerol is not beneficial in experimental pneumococcal meningitis. BMC infectious diseases, 10(84), p. 84. London: BioMed Central 10.1186/1471-2334-10-84
Grandgirard, Denis; Oberson, Kevin; Bühlmann, Angela; Gäumann, Rahel; Leib, Stephen L. (2010). Attenuation of cerebrospinal fluid inflammation by the nonbacteriolytic antibiotic daptomycin versus that by ceftriaxone in experimental pneumococcal meningitis. Antimicrobial agents and chemotherapy, 54(3), pp. 1323-1326. Washington, D.C.: American Society for Microbiology 10.1128/AAC.00812-09
Barbier, François; Ruppé, Etienne; Hernandez, David; Lebeaux, David; Francois, Patrice; Felix, Benjamin; Desprez, Adeline; Maiga, Aminata; Woerther, Paul-Louis; Gaillard, Kevin; Jeanrot, Cécile; Wolff, Michel; Schrenzel, Jacques; Andremont, Antoine; Ruimy, Raymond (2010). Methicillin-Resistant Coagulase-Negative Staphylococci in the Community: High Homology of SCCmec IVa between Staphylococcus epidermidis and Major Clones of Methicillin-Resistant Staphylococcus aureus. Journal of infectious diseases, 202(2), pp. 270-281. Oxford University Press 10.1086/653483
Ferry, T.; Uçkay, I.; Vaudaux, P.; François, P.; Schrenzel, Jacques; Harbarth, S.; Laurent, F.; Bernard, L.; Vandenesch, F.; Etienne, J.; Hoffmeyer, P.; Lew, D. (2010). Risk factors for treatment failure in orthopedic device-related methicillin-resistant Staphylococcus aureus infection. European journal of clinical microbiology & infectious diseases, 29(2), pp. 171-180. Springer 10.1007/s10096-009-0837-y
Slack, Emma; Hapfelmeier, Siegfried; Stecher, Bärbel; Velykoredko, Yuliya; Stoel, Maaike; Lawson, Melissa A E; Geuking, Markus B; Beutler, Bruce; Tedder, Thomas F; Hardt, Wolf-Dietrich; Bercik, Premysl; Verdu, Elena F; McCoy, Kathy D; Macpherson, Andrew J (2009). Innate and adaptive immunity cooperate flexibly to maintain host-microbiota mutualism. Science, 325(5940), pp. 617-620. Washington, D.C.: American Association for the Advancement of Science 10.1126/science.1172747
Spaniol, Violeta; Heiniger, Nadja; Troller, Rolf; Aebi, Christoph (2008). Outer membrane protein UspA1 and lipooligosaccharide are involved in invasion of human epithelial cells by Moraxella catarrhalis. Microbes and infection, 10(1), pp. 3-11. Paris: Elsevier Masson SAS 10.1016/j.micinf.2007.09.014
Gehre, F.; Leib, Stephen L.; Grandgirard, Denis; Kummer, Jürg; Bühlmann, Angela; Simon, Franziska; Gäumann, R.; Kharat, A. S.; Täuber, Martin G.; Tomasz, A. (2008). Essential role of choline for pneumococcal virulence in an experimental model of meningitis. Internal medicine journal, 264(2), pp. 143-154. Sydney: Blackwell 10.1111/j.1365-2796.2008.01930.x
Sury, Matthias D.; Agarinis, Claudia; Widmer, Hans-Rudolf; Leib, Stephen L.; Christen, Stephan (2008). JNK is activated but does not mediate hippocampal neuronal apoptosis in experimental neonatal pneumococcal meningitis. Neurobiology of disease, 32(1), pp. 142-150. Amsterdam: Elsevier 10.1016/J.nbd.2008.07.006
Sellner, Johann; Greeve, Isabell; Findling, Oliver; Kamm, Christian P.; Minten, Carsten; Engelhardt, Britta; Grandgirard, Denis; Leib, Stephen L.; Mattle, Heinrich P (2008). Effect of interferon-beta and atorvastatin on Th1/Th2 cytokines in multiple sclerosis. Neurochemistry international, 53(1-2), pp. 17-21. Amsterdam: Elsevier 10.1016/j.neuint.2008.04.004
Grandgirard, Denis; Loeffler, Jutta M.; Fischetti, Vincent A.; Leib, Stephen L. (2008). Phage lytic enzyme Cpl-1 for antibacterial therapy in experimental pneumococcal meningitis. Journal of infectious diseases, 197(11), pp. 1519-1522. Cary, N.C.: The University of Chicago Press 10.1086/587942
Sellner, Johann; Greeve, I; Findling, O; Grandgirard, Denis; Leib, Stephen L.; Mattle, H P (2008). Atorvastatin does not alter serum levels of sCD95 and sCD95L in multiple sclerosis. Clinical and experimental immunology, 152(2), pp. 280-284. Oxford: Blackwell Scientific Publications 10.1111/j.1365-2249.2008.03630.x
Hapfelmeier, Siegfried; Müller, Andreas J; Stecher, Bärbel; Kaiser, Patrick; Barthel, Manja; Endt, Kathrin; Eberhard, Matthias; Robbiani, Riccardo; Jacobi, Christoph A; Heikenwalder, Mathias; Kirschning, Carsten; Jung, Steffen; Stallmach, Thomas; Kremer, Marcus; Hardt, Wolf-Dietrich (2008). Microbe sampling by mucosal dendritic cells is a discrete, MyD88-independent step in DeltainvG S. Typhimurium colitis. The Journal of experimental medicine, 205(2), pp. 437-450. Rockefeller Univ. Press 10.1084/jem.20070633
Macpherson, Andrew J; Hapfelmeier, Siegfried; McCoy, Kathy D (2007). The armed truce between the intestinal microflora and host mucosal immunity. Seminars in immunology, 19(2), pp. 57-58. W.B. Saunders 10.1016/j.smim.2007.04.001
Suar, Mrutyunjay; Jantsch, Jonathan; Hapfelmeier, Siegfried; Kremer, Marcus; Stallmach, Thomas; Barrow, Paul A; Hardt, Wolf-Dietrich (2006). Virulence of broad- and narrow-host-range Salmonella enterica serovars in the streptomycin-pretreated mouse model. Infection and immunity, 74(1), pp. 632-644. American Society for Microbiology 10.1128/IAI.74.1.632-644.2006
Rhême, Céline; Ehrengruber, Markus U; Grandgirard, Denis (2005). Alphaviral cytotoxicity and its implication in vector development. Experimental physiology, 90(1), pp. 45-52. Blackwell 10.1113/expphysiol.2004.028142
Bifrare, Yoeng-Delphine; Kummer, Jürg; Joss, Philipp; Täuber, Martin G.; Leib, Stephen (2005). Brain-derived neurotrophic factor protects against multiple forms of brain injury in bacterial meningitis. Journal of infectious diseases, 191(1), pp. 40-45. The University of Chicago Press 10.1086/426399
Hapfelmeier, Siegfried; Hardt, Wolf-Dietrich (2005). A mouse model for S. typhimurium-induced enterocolitis. Trends in microbiology, 13(10), pp. 497-503. Elsevier Current Trends 10.1016/j.tim.2005.08.008
Stecher, Bärbel; Macpherson, Andrew J; Hapfelmeier, Siegfried; Kremer, Marcus; Stallmach, Thomas; Hardt, Wolf-Dietrich (2005). Comparison of Salmonella enterica serovar Typhimurium colitis in germfree mice and mice pretreated with streptomycin. Infection and immunity, 73(6), pp. 3228-3241. American Society for Microbiology 10.1128/IAI.73.6.3228-3241.2005
Hapfelmeier, Siegfried; Stecher, Bärbel; Barthel, Manja; Kremer, Marcus; Müller, Andreas J; Heikenwalder, Mathias; Stallmach, Thomas; Hensel, Michael; Pfeffer, Klaus; Akira, Shizuo; Hardt, Wolf-Dietrich (2005). The Salmonella pathogenicity island (SPI)-2 and SPI-1 type III secretion systems allow Salmonella serovar typhimurium to trigger colitis via MyD88-dependent and MyD88-independent mechanisms. Journal of immunology, 174(3), pp. 1675-1685. American Association of Immunologists
Gianinazzi, Christian; Grandgirard, Denis; Simon, Franziska; Imboden, Hans; Joss, Philipp; Täuber, Martin G.; Leib, Stephen (2004). Apoptosis of hippocampal neurons in organotypic slice culture models: direct effect of bacteria revisited. Journal of neuropathology and experimental neurology, 63(6), pp. 610-617. Lippincott Williams & Wilkins
Stecher, Bärbel; Hapfelmeier, Siegfried; Müller, Catherine; Kremer, Marcus; Stallmach, Thomas; Hardt, Wolf-Dietrich (2004). Flagella and chemotaxis are required for efficient induction of Salmonella enterica serovar Typhimurium colitis in streptomycin-pretreated mice. Infection and immunity, 72(7), pp. 4138-4150. American Society for Microbiology 10.1128/IAI.72.7.4138-4150.2004
Ehrbar, Kristin; Hapfelmeier, Siegfried; Stecher, Bärbel; Hardt, Wolf-Dietrich (2004). InvB is required for type III-dependent secretion of SopA in Salmonella enterica serovar Typhimurium. Journal of bacteriology, 186(4), pp. 1215-1219. American Society for Microbiology 10.1128/JB.186.4.1215-1219.2004
Hapfelmeier, Siegfried; Ehrbar, Kristin; Stecher, Bärbel; Barthel, Manja; Kremer, Marcus; Hardt, Wolf-Dietrich (2004). Role of the Salmonella pathogenicity island 1 effector proteins SipA, SopB, SopE, and SopE2 in Salmonella enterica subspecies 1 serovar Typhimurium colitis in streptomycin-pretreated mice. Infection and immunity, 72(2), pp. 795-809. American Society for Microbiology 10.1128/IAI.72.2.795-809.2004
Gianinazzi, Christian; Grandgirard, Denis; Imboden, Hans; Egger, Lotti; Meli, Damian N; Bifrare, Yoeng-Delphine; Joss, Philipp; Täuber, Martin G.; Borner, Christoph; Leib, Stephen (2003). Caspase-3 mediates hippocampal apoptosis in pneumococcal meningitis. Acta neuropathologica, 105(5), pp. 499-507. Springer 10.1007/s00401-003-0672-7
Barthel, Manja; Hapfelmeier, Siegfried; Quintanilla-Martínez, Leticia; Kremer, Marcus; Rohde, Manfred; Hogardt, Michael; Pfeffer, Klaus; Rüssmann, Holger; Hardt, Wolf-Dietrich (2003). Pretreatment of mice with streptomycin provides a Salmonella enterica serovar Typhimurium colitis model that allows analysis of both pathogen and host. Infection and immunity, 71(5), pp. 2839-2858. American Society for Microbiology 10.1128/IAI.71.5.2839-2858.2003
Baron, C; Domke, N; Beinhofer, M; Hapfelmeier, Siegfried (2001). Elevated temperature differentially affects virulence, VirB protein accumulation, and T-pilus formation in different Agrobacterium tumefaciens and Agrobacterium vitis strains. Journal of bacteriology, 183(23), pp. 6852-6861. American Society for Microbiology 10.1128/JB.183.23.6852-6861.2001
Hapfelmeier, Siegfried; Domke, N; Zambryski, P C; Baron, C (2000). VirB6 is required for stabilization of VirB5 and VirB3 and formation of VirB7 homodimers in Agrobacterium tumefaciens. Journal of bacteriology, 182(16), pp. 4505-4511. American Society for Microbiology 10.1128/JB.182.16.4505-4511.2000
Grandgirard, Denis; Studer, Erwin; Monney, Laurent; Belser, Tanja; Fellay, Isabelle; Borner, Christoph; Michel, Marcel R. (1998). Alphaviruses induce apoptosis in Bcl-2-overexpressing cells: evidence for a caspase-mediated, proteolytic inactivation of Bcl-2. EMBO journal, 17(5), pp. 1268-1278. Nature Publishing Group 10.1093/emboj/17.5.1268
Leib, Stephen (1994). [A case from practice (305). Recurrent erysipelas--tinea pedis et unginum--chronic venous insufficiency]. Schweizerische Rundschau für Medizin Praxis = Revue suisse de médecine Praxis, 83(39), pp. 1089-1090.
Schittny, Johannes C.; Timpl, Rupert; Engel, Jürgen (1988). High resolution immunoelectron microscopic localization of functional domains of laminin, nidogen, and heparan sulfate proteoglycan in epithelial basement membrane of mouse cornea reveals different topological orientations. Journal of cell biology, 107(4), pp. 1599-1610. Rockefeller Institute Press
Preiswerk, Benjamin; Imkamp, Frank; Vorburger, Denise; Hömke, Rico V.; Keller, Peter M.; Wagner, Karoline (2020). Mycoplasma penetrans bacteremia in an immunocompromised patient detected by metagenomic sequencing: a case report. BMC infectious diseases, 20(1), p. 7. BioMed Central 10.1186/s12879-019-4723-7
