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Lallemand, Séverine; Oyhenart, Jorge; Valot, Benoit; Borne, Romain; Bohard, Louis; Umhang, Gérald; Karamon, Jacek; Konyaev, Sergey; Rönnberg, Caroline; Gottstein, Bruno; Weil-Verhoeven, Delphine; Richou, Carine; Bresson-Hadni, Solange; Millon, Laurence; Bellanger, Anne-Pauline; Knapp, Jenny (2024). Challenging the phylogenetic relationships among Echinococcus multilocularis isolates from main endemic areas. International journal for parasitology, 54(11), pp. 569-582. Elsevier 10.1016/j.ijpara.2024.05.004
Abela, Irene A; Hauser, Anthony; Schwarzmüller, Magdalena; Pasin, Chloé; Kusejko, Katharina; Epp, Selina; Cavassini, Matthias; Battegay, Manuel; Rauch, Andri; Calmy, Alexandra; Notter, Julia; Bernasconi, Enos; Fux, Christoph A; Leuzinger, Karoline; Perreau, Matthieu; Ramette, Alban; Gottschalk, Jochen; Schindler, Eméry; Wepf, Alexander; Marconato, Maddalena; ... (2024). Deciphering factors linked with reduced SARS-CoV-2 susceptibility in the Swiss HIV Cohort Study. The journal of infectious diseases, 230(2), e292-e304. Oxford University Press 10.1093/infdis/jiae002
Thönen, Lisa; Kreuzer, Marco; Pestalozzi, Christine; Florean, Matilde; Mateo, Pierre; Züst, Tobias; Wei, Anlun; Giroud, Caitlin; Rouyer, Liza; Gfeller, Valentin; Notter, Matheus D; Knoch, Eva; Hapfelmeier, Siegfried; Becker, Claude; Schandry, Niklas; Robert, Christelle A M; Köllner, Tobias G; Bruggmann, Rémy; Erb, Matthias and Schlaeppi, Klaus (2024). The lactonase BxdA mediates metabolic specialisation of maize root bacteria to benzoxazinoids. Nature communications, 15(6535) Nature Publishing Group 10.1038/s41467-024-49643-w
Hermann, Laura; Schöning, Verena; Dräger, Sarah; Rentsch, Katharina; Moser, Stephan; Gürtler, Nicolas; Sendi, Parham; Osthoff, Michael; Hammann, Felix (2024). Population pharmacokinetics of flucloxacillin as intermittent bolus infusion in patients with Staphylococcus aureus bloodstream infection. The journal of antimicrobial chemotherapy, 79(8), pp. 2031-2039. Oxford University Press 10.1093/jac/dkae207
Vico-Oton, Eduard; Volet, Colin; Jacquemin, Nicolas; Dong, Yuan; Hapfelmeier, Siegfried; Meibom, Karin Lederballe; Bernier-Latmani, Rizlan (2024). Strain-dependent induction of primary bile acid 7-dehydroxylation by cholic acid. BMC microbiology, 24(286) BioMed Central 10.1186/s12866-024-03433-y
Lopez-Labrador, F Xavier; Huber, Michael; Sidorov, Igor A; Brown, Julianne R; Cuypers, Lize; Laenen, Lies; Vanmechelen, Bert; Maes, Piet; Fischer, Nicole; Pichler, Ian; Storey, Nathaniel; Atkinson, Laura; Schmutz, Stefan; Kufner, Verena; van Boheemen, Sander; Mulders, Claudia E; Grundhoff, Adam; Blümke, Patrick; Robitaille, Alexis; Cinek, Ondrej; ... (2024). Multicenter benchmarking of short and long read wet lab protocols for clinical viral metagenomics. Journal of clinical virology, 173(105695), p. 105695. Elsevier 10.1016/j.jcv.2024.105695
Damonti, Lauro; Gasser, Michael; Kronenberg, Andreas; Buetti, Niccolò (2024). Epidemiology of bloodstream infections caused by extended-spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae in Switzerland, 2015-2022: secular trends and association with the COVID-19 pandemic. The journal of hospital infection, 150, pp. 145-152. Elsevier 10.1016/j.jhin.2024.05.013
Boehm, Erik; Summermatter, Kathrin; Kaiser, Laurent (2024). Orthopox viruses: is the threat growing? Clinical microbiology and infection, 30(7), pp. 883-887. Elsevier 10.1016/j.cmi.2024.02.011
Plüss-Suard, Catherine; Mueller, Yolanda; Plate, Andreas; Senn, Oliver; Kronenberg, Andreas (2024). Re: 'Impact of the COVID-19 pandemic on antibiotic prescribing in high-prescribing primary care physicians in Switzerland' by Aghlmandi et al. Clinical microbiology and infection, 30(7), pp. 964-966. Elsevier 10.1016/j.cmi.2024.03.011
Marchionatti, Emma; Kittl, Sonja; Sendi, Parham; Perreten, Vincent (2024). Whole genome-based antimicrobial resistance, virulence, and phylogenetic characteristics of Trueperella pyogenes clinical isolates from humans and animals. Veterinary microbiology, 294, p. 110102. Elsevier 10.1016/j.vetmic.2024.110102
Kundlacz, Cindy; Aldeia, Claudia; Eddoubaji, Yasmine; Campos-Madueno, Edgar I; Endimiani, Andrea (2024). Complete genome sequence of Pseudomonas canadensis strain Pcan-CK-23 isolated from Zophobas morio larvae. Microbiology resource announcements, 13(6), e0002324. American Society for Microbiology 10.1128/mra.00023-24
Vergidis, Paschalis; Sendi, Parham; Alkhateeb, Hassan; Nguyen, M Hong (2024). How Do I Manage Refractory Invasive Pulmonary Aspergillosis. Clinical microbiology and infection, 30(6), pp. 755-761. Elsevier 10.1016/j.cmi.2024.01.015
Lux, Janine; Sánchez García, Lucía; Chaparro Fernández, Patricia; Laloli, Laura; Licheri, Manon F.; Galley, Clement; Hermans, Peter W.M.; Croucher, Nicholas J.; Veening, Jan-Willem; Dijkman, Ronald; Straume, Daniel; Hathaway, Lucy J. (2024). AmiA and AliA peptide ligands, found in Klebsiella pneumoniae, are imported into pneumococci and alter the transcriptome. Scientific reports, 14 Springer Nature 10.1038/s41598-024-63217-2
Cisco, Giulio; Meier, Armando N; Senn, Nicolas; Mueller, Yolanda; Kronenberg, Andreas; Locatelli, Isabella; Knüsli, José; Lhopitallier, Loïc; Boillat-Blanco, Noemie; Marti, Joachim (2024). Cost-effectiveness analysis of procalcitonin and lung ultrasonography guided antibiotic prescriptions in primary care. (In Press). The European journal of health economics Springer 10.1007/s10198-024-01694-y
Wegner, Fanny; Cabrera-Gil, Blanca; Tanguy, Araud; Beckmann, Christiane; Beerenwinkel, Niko; Bertelli, Claire; Carrara, Matteo; Cerutti, Lorenzo; Chen, Chaoran; Cordey, Samuel; Dumoulin, Alexis; du Plessis, Louis; Friedli, Marc; Gerth, Yannick; Greub, Gilbert; Härri, Adrian; Hirsch, Hans; Howald, Cedric; Huber, Michael; Imhof, Alexander; ... (2024). How much should we sequence? An analysis of the Swiss SARS-CoV-2 surveillance effort. Microbiology spectrum, 12(5), e0362823. American Society for Microbiology 10.1128/spectrum.03628-23
Ehrhard, Simone; Herren, Lukas; Ricklin, Meret E; Suter-Riniker, Franziska; Exadaktylos, Aristomenis K; Hautz, Wolf; Müller, Martin; Jent, Philipp (2024). Do all Emergency Room Patients With Influenza-like Symptoms Need Blood Cultures? A Retrospective Cohort Study of 2 Annual Influenza Seasons. Open Forum Infectious Diseases, 11(5) Oxford University Press 10.1093/ofid/ofae242
Lux, Janine; Portmann, Hannah; Sánchez García, Lucia; Erhardt, Maria; Holivololona, Lalaina; Laloli, Laura; Licheri, Manon F; Gallay, Clement; Hoepner, Robert; Croucher, Nicholas J; Straume, Daniel; Veening, Jan-Willem; Dijkman, Ronald; Heller, Manfred; Grandgirard, Denis; Leib, Stephen L; Hathaway, Lucy J (2024). Klebsiella pneumoniae peptide hijacks a Streptococcus pneumoniae permease to subvert pneumococcal growth and colonization. Communications biology, 7(425) Springer Nature 10.1038/s42003-024-06113-9
Banholzer, Nicolas; Jent, Philipp; Bittel, Pascal; Zürcher, Kathrin; Furrer, Lavinia; Bertschinger, Simon; Weingartner, Ernest; Ramette, Alban; Egger, Matthias; Hascher, Tina; Fenner, Lukas (2024). Air Cleaners and Respiratory Infections in Schools: A Modeling Study Based on Epidemiologic, Environmental, and Molecular Data. Open Forum Infectious Diseases, 11(4), ofae169. Oxford University Press 10.1093/ofid/ofae169
Kundlacz, Cindy; Aldeia, Claudia; Eddoubaji, Yasmine; Campos-Madueno, Edgar I; Endimiani, Andrea (2024). A new OCH β-lactamase from a Brucella pseudintermedia (Ochrobactrum intermedium) strain isolated from Zophobas morio larvae. Journal of global antimicrobial resistance, 36, pp. 65-69. Elsevier 10.1016/j.jgar.2023.12.012
Gloor, Severin; Jiang, Wanjie; Maurer, Martin H; Gottstein, Bruno; Oberli, Alexander Oliver; Hagemann, Jürgen B; Hotz, Julian F; Candinas, Daniel; Lachenmayer, Anja; Grüner, Beate; Beldi, Guido (2024). The trajectory of anti-recEm18 antibody levels determines follow-up after curative resection of hepatic alveolar echinococcosis. HPB : the official journal of the International Hepato Pancreato Biliary Association, 26(2), pp. 224-233. Elsevier 10.1016/j.hpb.2023.10.007
Blacksell, Stuart D; Dhawan, Sandhya; Kusumoto, Marina; Le, Khanh K; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph P; Almuhairi, Salama S; Sendow, Indrawati; Scheel, Christina M; Ahumibe, Anthony; Masuku, Zibusiso M; Bennett, Allan M; Kojima, Kazunobu; Harper, David R; Hamilton, Keith (2024). Laboratory-acquired infections and pathogen escapes worldwide between 2000 and 2021: a scoping review. The Lancet Microbe, 5(2), e194-e202. Elsevier 10.1016/S2666-5247(23)00319-1
El Zein, Said; Berbari, Elie F; Passerini, Matteo; Petri, Francesco; Maamari, Julian; Murad, M Hassan; Sendi, Parham; Tande, Aaron J (2024). Rifampin Based Therapy for Patients with Staphylococcus aureus Native Vertebral Osteomyelitis: A Systematic Review and Meta-Analysis. Clinical infectious diseases, 78(1), pp. 40-47. Oxford University Press 10.1093/cid/ciad560
Manna, Sam; Werren, Joel P; Ortika, Belinda D; Bellich, Barbara; Pell, Casey L; Nikolaou, Elissavet; Gjuroski, Ilche; Lo, Stephanie; Hinds, Jason; Tundev, Odgerel; Dunne, Eileen M; Gessner, Bradford D; Bentley, Stephen D; Russell, Fiona M; Mulholland, E Kim; Mungun, Tuya; von Mollendorf, Claire; Licciardi, Paul V; Cescutti, Paola; Ravenscroft, Neil; ... (2024). Streptococcus pneumoniae serotype 33G: genetic, serological, and structural analysis of a new capsule type. Microbiology spectrum, 12(1), e0357923. American Society for Microbiology 10.1128/spectrum.03579-23
Terrazos Miani, Miguel A; Borcard, Loïc; Gempeler, Sonja; Baumann, Christian; Bittel, Pascal; Leib, Stephen L; Neuenschwander, Stefan; Ramette, Alban Nicolas (2024). NASCarD (Nanopore Adaptive Sampling with Carrier DNA): A Rapid, PCR-Free Method for SARS-CoV-2 Whole-Genome Sequencing in Clinical Samples. Pathogens, 13(1) MDPI AG 10.3390/pathogens13010061
Ripellino, Paolo; Lascano, Agustina Maria; Scheidegger, Olivier; Schilg-Hafer, Lenka; Schreiner, Bettina; Tsouni, Pinelopi; Vicino, Alex; Peyer, Anne-Kathrin; Humm, Andrea Maria; Décard, Bernhard; Pianezzi, Enea; Zezza, Giulia; Sparasci, Davide; Hundsberger, Thomas; Dietmann, Anelia; Jung, Hans; Kuntzer, Thierry; Wilder-Smith, Einar; Martinetti-Lucchini, Gladys; Petrini, Orlando; ... (2024). Neuropathies related to hepatitis E virus infection: A prospective, matched case-control study. European journal of neurology, 31(1), e16030. Wiley 10.1111/ene.16030
Bai, Xiaopeng; De Palma, Giada; Boschetti, Elisa; Nishihara, Yuichiro; Lu, Jun; Shimbori, Chiko; Costanzini, Anna; Saqib, Zarwa; Kraimi, Narjis; Sidani, Sacha; Hapfelmeier, Siegfried; Macpherson, Andrew J; Verdu, Elena F; De Giorgio, Roberto; Collins, Stephen M; Bercik, Premysl (2024). Vasoactive intestinal polypeptide plays a key role in the microbial-neuroimmune control of intestinal motility. Cellular and molecular gastroenterology and hepatology, 17(3), pp. 383-398. Elsevier 10.1016/j.jcmgh.2023.11.012
Kronenberg, Andreas; Gasser, Michael; Plüss-Suard, Catherine; Friedli, Olivier; Leib, Stephen (2024). Für einen besseren Umgang mit Antibiotika. Schweizerische Ärztezeitung, 105(04), pp. 29-33. EMH Schweizerischer Ärzteverlag AG 10.4414/saez.2024.1288111951
Eddoubaji, Yasmine; Aldeia, Claudia; Campos-Madueno, Edgar I.; Moser, Aline I.; Kundlacz, Cindy; Perreten, Vincent; Hilty, Markus; Endimiani, Andrea (2024). A new in vivo model of intestinal colonization using Zophobas morio larvae: testing hyperepidemic ESBL- and carbapenemase-producing Escherichia coli clones. Frontiers in Microbiology, 15 Frontiers 10.3389/fmicb.2024.1381051
Endimiani, Andrea (2024). When to suspect hypervirulent Klebsiella pneumoniae: the role of laboratory diagnostics (Unpublished). In: ESCMID Global. Barcelona. 28-04-2024.
El Zein, Said; Berbari, Elie F; LeMahieu, Allison M; Jagtiani, Anil; Sendi, Parham; Virk, Abinash; Morrey, Mark E; Tande, Aaron J (2024). Optimal antibiotics duration following surgical management of septic olecranon bursitis: a 12-year retrospective analysis. Journal of bone and joint infection, 9(2), pp. 107-115. Ivyspring International Publisher 10.5194/jbji-9-107-2024
Zeeb, Marius; Pasin, Chloé; Cavassini, Matthias; Bieler-Aeschlimann, Mélanie; Frischknecht, Paul; Kusejko, Katharina; Fellay, Jacques; Blanquart, François; Metzner, Karin J; Neumann, Kathrin; Jörimann, Lisa; Tschumi, Jasmin; Bernasconi, Enos; Huber, Michael; Kovari, Helen; Leuzinger, Karoline; Notter, Julia; Perreau, Matthieu; Rauch, Andri; Ramette, Alban; ... (2024). Self-reported neurocognitive complaints in the Swiss HIV Cohort Study: a viral genome-wide association study. Brain Communications, 6(4) Oxford University Press 10.1093/braincomms/fcae188
Schwitter, Janine; Branca, Mattia; Bicvic, Antonela; Abbühl, Lena S.; Suter-Riniker, Franziska; Leib, Stephen L.; Dietmann, Anelia (2024). Long-term sequelae after viral meningitis and meningoencephalitis are frequent, even in mildly affected patients, a prospective observational study. Frontiers in neurology, 15 Frontiers Media S.A. 10.3389/fneur.2024.1411860
Reinert, Noémie; Wetzel, Katinka; Franzeck, Fabian; Morgenstern, Mario; Aschwanden, Markus; Wolff, Thomas; Clauss, Martin; Sendi, Parham (2024). What is the agreement between principles and practice of antibiotic stewardship in the management of diabetic foot infection: an in-hospital quality control study. Journal of bone and joint infection, 9(3), pp. 183-190. Copernicus 10.5194/jbji-9-183-2024
Banholzer, Nicolas; Jent, Philipp; Bittel, Pascal; Zürcher, Kathrin; Furrer, Lavinia; Bertschinger, Simon; Weingartner, Ernest; Ramette, Alban; Egger, Matthias; Hascher, Tina; Fenner, Lukas (30 December 2023). Air cleaners and respiratory infections in schools: A modeling study using epidemiological, environmental, and molecular data. medRxiv 10.1101/2023.12.29.23300635
Mostacci, Nadja; Wüthrich, Tsering Monika; Siegwald, Léa; Kieser, Silas; Steinberg, Ruth; Sakwinska, Olga; Latzin, Philipp; Korten, Insa; Hilty, Markus (2023). Informed interpretation of metagenomic data by StrainPhlAn enables strain retention analyses of the upper airway microbiome. mSystems, 8(6), e0072423. American Society for Microbiology 10.1128/msystems.00724-23
Burz, Sebastian Dan; Causevic, Senka; Dal Co, Alma; Dmitrijeva, Marija; Engel, Philipp; Garrido-Sanz, Daniel; Greub, Gilbert; Hapfelmeier, Siegfried; Hardt, Wolf-Dietrich; Hatzimanikatis, Vassily; Heiman, Clara Margot; Herzog, Mathias Klaus-Maria; Hockenberry, Alyson; Keel, Christoph; Keppler, Andreas; Lee, Soon-Jae; Luneau, Julien; Malfertheiner, Lukas; Mitri, Sara; Ngyuen, Bidong; ... (2023). From microbiome composition to functional engineering, one step at a time. Microbiology and molecular biology reviews, 87(4), e0006323. American Society for Microbiology 10.1128/mmbr.00063-23
Probst, Lukas; Laloli, Laura; Licheri, Manon Flore; Licheri, Matthias; Gultom, Mitra; Holwerda, Melle; V'kovski, Philip; Dijkman, Ronald (2023). Generation and Characterization of an Influenza D Reporter Virus. Viruses, 15(12), p. 2444. MDPI 10.3390/v15122444
Bugnon, Quentin; Melendez, Camilo; Desiatkina, Oksana; Fayolle de Chaptes, Louis; Holzer, Isabelle; Păunescu, Emilia; Hilty, Markus; Furrer, Julien (2023). In vitro antibacterial activity of dinuclear thiolato-bridged ruthenium(II)-arene compounds. Microbiology spectrum, 11(6), e0095423. American Society for Microbiology 10.1128/spectrum.00954-23
Tandon, Disha; Dong, Yuan; Hapfelmeier, Siegfried Hektor (5 December 2023). Pipeline for species-resolved full-length16S rRNA amplicon nanopore sequencing analysis of low-complexity bacterial microbiota (BioRxiv). Cold Spring Harbor Laboratory 10.1101/2023.12.05.570138
Donà, Valentina; Nordmann, Patrice; Kittl, Sonja; Schuller, Simone; Bouvier, Maxime; Poirel, Laurent; Endimiani, Andrea; Perreten, Vincent (2023). Emergence of OXA-48-producing Enterobacter hormaechei in a Swiss companion animal clinic and their genetic relationship to clinical human isolates. The journal of antimicrobial chemotherapy, 78(12), pp. 2950-2960. Oxford University Press 10.1093/jac/dkad337
Blacksell, Stuart D; Dhawan, Sandhya; Kusumoto, Marina; Le, Kim Khanh; Summermatter, Kathrin; O'Keefe, Joseph; Kozlovac, Joseph; Almuhairi, Salama Suhail; Sendow, Indrawati; Scheel, Christina M; Ahumibe, Anthony; Masuku, Zibusiso M; Bennett, Allan M; Kojima, Kazunobu; Harper, David R; Hamilton, Keith (2023). The Biosafety Research Road Map: The Search for Evidence to Support Practices in the Laboratory-Foot and Mouth Disease Virus. Applied Biosafety, 28(4), pp. 199-215. Sage 10.1089/apb.2022.0041
Pitton, Melissa; Valente, Luca G; Oberhaensli, Simone; Casanova, Carlo; Sendi, Parham; Schnegg, Bruno; Jakob, Stephan M; Cameron, David R; Que, Yok-Ai; Fürholz, Monika (2023). Dynamics of bacterial pathogens at the driveline exit site in patients with ventricular assist devices: a prospective, observational, single-centre cohort study. The Journal of heart and lung transplantation, 42(10), pp. 1445-1454. Elsevier 10.1016/j.healun.2023.05.016
Schimanski, Bernd; Kräuchi, Rahel; Stettler, Jolanda; Lejon Crottet, Sofia; Niederhauser, Christoph; Clausen, Frederik Banch; Fontana, Stefano; Hodel, Markus; Amylidi-Mohr, Sofia; Raio, Luigi; Abbal, Claire; Henny, Christine (2023). Fetal RHD Screening in RH1 Negative Pregnant Women: Experience in Switzerland. Biomedicines, 11(10) MDPI 10.3390/biomedicines11102646
Scheier, T C; Franz, J; Boumasmoud, M; Andreoni, F; Chakrakodi, B; Duvnjak, B; Egli, A; Zingg, W; Ramette, A; Wolfensberger, A; Kouyos, R D; Brugger, S D (2023). Fourier-transform infrared spectroscopy for typing of vancomycin-resistant Enterococcus faecium: performance analysis and outbreak investigation. (In Press). Microbiology spectrum, 11(5), e0098423. American Society for Microbiology 10.1128/spectrum.00984-23
Fontana, Stefano; Ripellino, Paolo; Niederhauser, Christoph; Widmer, Nadja; Gowland, Peter; Petrini, Orlando; Aprile, Manuela; Merlani, Giorgio; Bihl, Florian (2023). Epidemiology of HEV Infection in Blood Donors in Southern Switzerland. Microorganisms, 11(10) MDPI 10.3390/microorganisms11102375
Endimiani, Andrea (21 September 2023). Antibiotic Resistance in a One-Health Concept (Unpublished). In: Symposium Emerging Antibiotic Resistance 2023. Fribourg. 21.09.2023.
Haddad, Sara F; Lahr, Brian D; Patarroyo, Sebastian Santos; Chesdachai, Supavit; Kies, Kami D; O'Horo, John C; DeSimone, Daniel C; Sendi, Parham; Baddour, Larry M (2023). Bloodstream Infection Due to Coagulase-Negative Staphylococci: Impact of Species on Prevalence of Infective Endocarditis. Antibiotics, 12(9) MDPI 10.3390/antibiotics12091453
Paulo, A Cristina; Lança, João; Almeida, Sónia T; Hilty, Markus; Sá-Leão, Raquel (2023). The upper respiratory tract microbiota of healthy adults is affected by Streptococcus pneumoniae carriage, smoking habits, and contact with children. Microbiome, 11(1), p. 199. BioMed Central 10.1186/s40168-023-01640-9
Sendi, Parham; Lora-Tamayo, Jaime; Cortes-Penfield, Nicolas W; Uçkay, Ilker (2023). Early switch from IV to oral antibiotic treatment in bone and joint infections. Clinical microbiology and infection, 29(9), pp. 1133-1138. Elsevier 10.1016/j.cmi.2023.05.008
Sendi, Parham; Nelson, Sandra Bliss; Soriano, Alex; Spellberg, Brad (2023). Early switch from IV to oral antimicrobial therapy in infectious diseases. Clinical microbiology and infection, 29(9), pp. 1117-1119. Elsevier 10.1016/j.cmi.2023.06.021
Chiffi, Gabriele; Grandgirard, Denis; Leib, Stephen L; Chrdle, Aleš; Růžek, Daniel (2023). Tick-borne encephalitis: A comprehensive review of the epidemiology, virology, and clinical picture. Reviews in medical virology, 33(5), e2470. Wiley 10.1002/rmv.2470
Campos-Madueno, Edgar I; Aldeia, Claudia; Perreten, Vincent; Sendi, Parham; Moser, Aline I; Endimiani, Andrea (2023). Detection of blaCTX-M and blaDHA genes in stool samples of healthy people: comparison of culture- and shotgun metagenomic-based approaches. Frontiers in Microbiology, 14(1236208), p. 1236208. Frontiers 10.3389/fmicb.2023.1236208
Campos-Madueno, Edgar I; Aldeia, Claudia; Sendi, Parham; Endimiani, Andrea (2023). Escherichia ruysiae May Serve as a Reservoir of Antibiotic Resistance Genes across Multiple Settings and Regions. Microbiology spectrum, 11(4), e0175323. American Society for Microbiology 10.1128/spectrum.01753-23
Bergant, Valter; Schnepf, Daniel; de Andrade Krätzig, Niklas; Hubel, Philipp; Urban, Christian; Engleitner, Thomas; Dijkman, Ronald; Ryffel, Bernhard; Steiger, Katja; Knolle, Percy A; Kochs, Georg; Rad, Roland; Staeheli, Peter; Pichlmair, Andreas (2023). mRNA 3'UTR lengthening by alternative polyadenylation attenuates inflammatory responses and correlates with virulence of Influenza A virus. Nature communications, 14(1), p. 4906. Nature Publishing Group 10.1038/s41467-023-40469-6
Anderegg, Nanina; Schwab, Tiana; Borcard, Loïc; Mugglin, Catrina; Keune-Dübi, Bettina; Ramette, Alban; Fenner, Lukas (2023). Population-based SARS-CoV-2 whole genome sequencing and contact tracing during the COVID-19 pandemic in Switzerland. Journal of infectious diseases, 228(3), pp. 251-260. Oxford University Press 10.1093/infdis/jiad074
Wurcel, Alysse G; DeSimone, Daniel C; Marks, Laura; Baddour, Larry M; Sendi, Parham (2023). Which trial do we need? Long-acting glycopeptides versus oral antibiotics for infective endocarditis in patients with substance use disorder. Clinical microbiology and infection, 29(8), pp. 952-954. Elsevier 10.1016/j.cmi.2023.04.005
Marchionatti, Emma; Kittl, Sonja; Sendi, Parham; Perreten, Vincent (5 July 2023). Phenotypic and WGS-based characterization of antimicrobial resistance of Trueperella pyogenes clinical isolates from humans and animals in Switzerland (Unpublished). In: 9th Symposium on Antimicrobial Resistance in Animals and the Environment. Tours, France. 3. - 5. July 2023.
Sendi, Parham; Widmer, Nadja; Branca, Mattia; Thierstein, Marc; Büchi, Annina Elisabeth; Güntensperger, Dominik; Blum, Manuel Raphael; Baldan, Rossella; Tinguely, Caroline; Heg, Dik; Theel, Elitza S; Berbari, Elie; Tande, Aaron J; Endimiani, Andrea; Gowland, Peter; Niederhauser, Christoph (2023). Do quantitative levels of antispike-IgG antibodies aid in predicting protection from SARS-CoV-2 infection? Results from a longitudinal study in a police cohort. Journal of medical virology, 95(7), e28904. Wiley 10.1002/jmv.28904
Rüttimann, Céline; Nissen-Kratzert, Annika; Mostacci, Nadja; Künstle, Noëmi; Marten, Andrea; Gisler, Amanda; Bacher, Katharina; Yammine, Sophie; Steinberg, Ruth; Schulzke, Sven; Röösli, Martin; Latzin, Philipp; Hilty, Markus; Frey, Urs; Gorlanova, Olga (2023). Antibiotics in pregnancy influence nasal microbiome and respiratory morbidity in infancy. ERJ Open Research, 9(4) European Respiratory Society 10.1183/23120541.00225-2023
Margini, Cristina; Maldonado, Rafaela; Keller, Peter; Banz, Yara; Escher, Robert; Waldegg, Gabriel (2023). Fever of Unknown Origin, a Vascular Event, and Immunosuppression in Tick-Endemic Areas: Think About Neoehrlichiosis. Cureus, 15(6), e40617. Springer Nature Group 10.7759/cureus.40617
Gasser, Michael; Cassini, Alessandro; Lo Fo Wong, Danilo; Gelormini, Marcello; Nahrgang, Saskia Andrea; Zingg, Walter; Kronenberg, Andreas Oskar (2023). Associated deaths and disability-adjusted life-years caused by infections with antibiotic-resistant bacteria in Switzerland, 2010 to 2019. Eurosurveillance, 28(20) European Centre for Disease Prevention and Control 10.2807/1560-7917.ES.2023.28.20.2200532
Geis, Daniel; Canova, Nina; Lhopitallier, Loïc; Kronenberg, Andreas; Meuwly, Jean-Yves; Senn, Nicolas; Mueller, Yolanda; Fasseur, Fabienne; Boillat-Blanco, Noémie (2023). Exploration of the Acceptance of the Use of Procalcitonin Point-of-Care Testing and Lung Ultrasonography by General Practitioners to Decide on Antibiotic Prescriptions for Lower Respiratory Infections: A Qualitative Study. BMJ open, 13(5), e063922. BMJ Publishing Group 10.1136/bmjopen-2022-063922
Raemy, Samuel; Casanova, Carlo; Baldan, Rossella; Barreto, Erin; Tande, Aaron J; Endimiani, Andrea; Leib, Stephen L; Fischer, Urs; Sendi, Parham (2023). Penicillin-Susceptible Streptococcus pneumoniae Meningitis in Adults: Does the Ceftriaxone Dosing Matter? Antibiotics, 12(5) MDPI 10.3390/antibiotics12050878
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Chevalier, Claire; Stojanović, Ozren; Colin, Didier J; Suarez-Zamorano, Nicolas; Tarallo, Valentina; Veyrat-Durebex, Christelle; Rigo, Dorothée; Fabbiano, Salvatore; Stevanović, Ana; Hagemann, Stefanie Claudia; Montet, Xavier; Seimbille, Yann; Zamboni, Nicola; Hapfelmeier, Siegfried Hektor; Trajkovski, Mirko (2015). Gut Microbiota Orchestrates Energy Homeostasis during Cold. Cell, 163(6), pp. 1360-1374. Cell Press 10.1016/j.cell.2015.11.004
Suárez-Zamorano, Nicolas; Fabbiano, Salvatore; Chevalier, Claire; Stojanović, Ozren; Colin, Didier J; Stevanović, Ana; Veyrat-Durebex, Christelle; Tarallo, Valentina; Rigo, Dorothée; Germain, Stéphane; Ilievska, Miroslava; Montet, Xavier; Seimbille, Yann; Hapfelmeier, Siegfried Hektor; Trajkovski, Mirko (2015). Microbiota depletion promotes browning of white adipose tissue and reduces obesity. Nature medicine, 21(12), pp. 1497-1501. Nature Publishing Group 10.1038/nm.3994
Frick, Tamara; Springe, Dirk; Grandgirard, Denis; Leib, Stephen; Hänggi, Matthias (2015). An improved simple rat model for global cerebral ischaemia by induced cardiac arrest. Neurological research, 38(4), pp. 373-380. Maney 10.1179/1743132815Y.0000000090
Liechti, Fabian D; Grandgirard, Denis; Leib, Stephen (2015). Bacterial meningitis: insights into pathogenesis and evaluation of new treatment options: a perspective from experimental studies. Future microbiology, 10(7), pp. 1195-1213. Future Medicine 10.2217/fmb.15.43
Liechti, F D; Grandgirard, Denis; Leib, Stephen (2015). The antidepressant fluoxetine protects the hippocampus from brain damage in experimental pneumococcal meningitis. Neuroscience, 297, pp. 89-94. Elsevier 10.1016/j.neuroscience.2015.03.056
Grandgirard, Denis; Furi, Leonardo; Ciusa, Maria Laura; Baldassarri, Lucilla; Knight, Daniel R; Morrissey, Ian; Largiadèr, Carlo Rodolfo; Leib, Stephen; Oggioni, Marco R (2015). Mutations upstream of fabI in triclosan resistant Staphylococcus aureus strains are associated with elevated fabI gene expression. BMC Genomics, 16(345), p. 345. BioMed Central 10.1186/s12864-015-1544-y
Wang, Junhua; Vuitton, Dominique A; Müller, Norbert; Hemphill, Andrew; Spiliotis, Markus; Blagosklonov, Oleg; Grandgirard, Denis; Leib, Stephen; Shalev, Itay; Levy, Gary; Lu, Xiaomei; Lin, Renyong; Wen, Hao; Gottstein, Bruno (2015). Deletion of Fibrinogen-like Protein 2 (FGL-2), a Novel CD4+ CD25+ Treg Effector Molecule, Leads to Improved Control of Echinococcus multilocularis Infection in Mice. PLoS neglected tropical diseases, 9(5), e0003755. Public Library of Science 10.1371/journal.pntd.0003755
Spaniol, Violeta; Bernhard, Sara; Aebi, Christoph (2015). Moraxella catarrhalis AcrAB-OprM efflux pump contributes to antimicrobial resistance and is enhanced during cold shock response. Antimicrobial agents and chemotherapy, 59(4), pp. 1886-1894. American Society for Microbiology 10.1128/AAC.03727-14
Bendel, Stepani; Springe, Dirk; Pereira, Adriano José; Grandgirard, Denis; Leib, Stephen; Putzu, Alessandro; Schlickeiser, Jannis; Jakob, Stephan M.; Takala, Jukka; Hänggi, Matthias (2015). Do different anesthesia regimes affect hippocampal apoptosis and neurologic deficits in a rodent cardiac arrest model? BMC anesthesiology, 15(2), p. 2. BioMed Central 10.1186/1471-2253-15-2
Liechti, Fabian D; Bächtold, Fabian; Grandgirard, Denis; Leppert, David; Leib, Stephen (2015). The matrix metalloproteinase inhibitor RS-130830 attenuates brain injury in experimental pneumococcal meningitis. Journal of neuroinflammation, 12(43), p. 43. BioMed Central 10.1186/s12974-015-0257-0
Pop Ristova, Petra; Wenzhöfer, Frank; Ramette, Alban; Felden, Janine; Boetius, Antje (2015). Spatial scales of bacterial community diversity at cold seeps (Eastern Mediterranean Sea). The ISME journal, 9(6), pp. 1306-1318. Nature Publishing Group 10.1038/ismej.2014.217
Ricci, Susanna; Grandgirard, Denis; Wenzel, Michael; Braccini, Tiziana; Salvatore, Paola; Oggioni, Marco R; Leib, Stephen; Koedel, Uwe (2014). Inhibition of matrix metalloproteinases attenuates brain damage in experimental meningococcal meningitis. BMC infectious diseases, 14(726), p. 726. BioMed Central 10.1186/s12879-014-0726-6
Hilty, Markus; Wüthrich, Daniel; Salter, Susannah J; Engel, Hans Jürg; Campbell, Samuel; Sá-Leão, Raquel; de Lencastre, Hermínia; Hermans, Peter; Sadowy, Ewa; Turner, Paul; Chewapreecha, Claire; Diggle, Mathew; Pluschke, Gerd; McGee, Lesley; Eser, Ozgen Köseoğlu; Low, Donald E; Smith-Vaughan, Heidi; Endimiani, Andrea; Küffer, Marianne; Dupasquier, Mélanie; ... (2014). Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages. Genome biology and evolution, 6(12), pp. 3281-3294. Oxford University Press 10.1093/gbe/evu263
Maffioli, Carola; Grandgirard, Denis; Engler, Olivier; Leib, Stephen (2014). A tick-borne encephalitis model in infant rats infected with langat virus. Journal of neuropathology and experimental neurology, 73(12), pp. 1107-1115. Lippincott Williams & Wilkins 10.1097/NEN.0000000000000131
Balmer, Maria L; Schürch, Christian; Saito, Yasuyuki; Geuking, Markus; Li, Hai; Cuenca, Miguelangel; Kovtonyuk, Larisa V; McCoy, Kathleen; Hapfelmeier, Siegfried; Ochsenbein, Adrian; Manz, Markus G; Slack, Emma; Macpherson, Andrew (2014). Microbiota-derived compounds drive steady-state granulopoiesis via MyD88/TICAM signaling. Journal of immunology, 193(10), pp. 5273-5283. American Association of Immunologists 10.4049/jimmunol.1400762
Coutinho, Leonam G; Christen, Stephan; Bellac, Caroline L; Fontes, Fabrícia; de Souza, Fladjule; Grandgirard, Denis; Leib, Stephen; Agnez-Lima, Lucymara F (2014). The kynurenine pathway is involved in bacterial meningitis. Journal of neuroinflammation, 11(169), p. 169. BioMed Central 10.1186/s12974-014-0169-4
Schaffner, Thierry Oliver; Hinds, Jason; Gould, Katherine A; Wüthrich, Daniel; Bruggmann, Rémy; Küffer, Marianne; Mühlemann, Kathrin; Hilty, Markus; Hathaway, Lucy Jane (2014). A point mutation in cpsE renders Streptococcus pneumoniae nonencapsulated and enhances its growth, adherence and competence. BMC microbiology, 14(210), p. 210. BioMed Central 10.1186/s12866-014-0210-x
Meichtry, Jurka; Born, Rita; Küffer, Marianne; Zwahlen, Marcel; Albrich, Werner C.; Brugger, Silvio; Mühlemann, Kathrin; Hilty, Markus (2014). Serotype epidemiology of invasive pneumococcal disease in Swiss adults: A nationwide population-based study. Vaccine, 32(40), pp. 5185-5191. Elsevier 10.1016/j.vaccine.2014.07.060
Balmer, Maria Luisa; Slack, Emma; De Gottardi, Andrea; Lawson, Melissa; Hapfelmeier, Siegfried Hektor; Miele, Luca; Grieco, Antonio; Van Vlierberghe, Hans; Fahrner, René; Patuto, Nicola; Bernsmeier, Christine; Ronchi, Francesca; Wyss, Madeleine; Keogh-Stroka, Deborah M.; Dickgreber, Nina; Heim, Markus H; McCoy, Kathy D; Macpherson, Andrew (2014). The liver may act as a firewall mediating mutualism between the host and its gut commensal microbiota. Science translational medicine, 6(237), 237ra66. American Association for the Advancement of Science 10.1126/scitranslmed.3008618
Agyeman, Philipp; Grandgirard, Denis; Leib, Stephen (2014). Pathogenesis and Pathophysiology of Bacterial Infections. In: Scheld, Michael; Whitley, Richard J.; Marra, Christina M. (eds.) Infections of the Central Nervous System (pp. 341-364). Philadelphia, PA, USA: Lippincott Williams & Wilkins
Engel, Hans Jürg; Mika, Moana; Denapaite, Dalia; Hakenbeck, Regine; Mühlemann, Kathrin; Heller, Manfred; Hathaway, Lucy Jane; Hilty, Markus (2014). A low affinity penicillin-binding protein 2x is required for heteroresistance in Streptococcus pneumoniae. Antimicrobial agents and chemotherapy, 58(7), pp. 3934-3941. American Society for Microbiology 10.1128/AAC.02547-14
Liechti, Fabian D; Grandgirard, Denis; Leppert, David; Leib, Stephen (2014). Matrix metalloproteinase inhibition lowers mortality and brain injury in experimental pneumococcal meningitis. Infection and immunity, 82(4), pp. 1710-1718. American Society for Microbiology 10.1128/IAI.00073-14
Hirt-Minkowski, Patricia; Marti, Hans-Peter; Hönger, Gideon; Grandgirard, Denis; Leib, Stephen; Amico, Patrizia; Schaub, Stefan (2014). Correlation of serum and urinary matrix metalloproteases/tissue inhibitors of metalloproteases with subclinical allograft fibrosis in renal transplantation. Transplant immunology, 30(1), pp. 1-6. Elsevier 10.1016/j.trim.2013.11.004
Holler, Jon G.; Brandt, Christian T.; Leib, Stephen L.; Rowland, Ian J.; Ostergaard, Christian (2014). Increase in hippocampal water diffusion and volume during experimental pneumococcal meningitis is aggravated by bacteremia. BMC infectious diseases, 14(1), p. 240. BioMed Central 10.1186/1471-2334-14-240
Liechti, Fabian D; Stüdle, Nicolas; Theurillat, Regula; Grandgirard, Denis; Thormann, Wolfgang; Leib, Stephen (2014). The mood-stabilizer lithium prevents hippocampal apoptosis and improves spatial memory in experimental meningitis. PLoS ONE, 9(11), e113607. Public Library of Science 10.1371/journal.pone.0113607
Baranger, Kévin; Rivera, Santiago; Liechti, Fabian D; Grandgirard, Denis; Bigas, Judit; Seco, Jesús; Tarrago, Teresa; Leib, Stephen; Khrestchatisky, Michel (2014). Endogenous and synthetic MMP inhibitors in CNS physiopathology. In: Dityatev, Alexander; Wehrle-Haller, Bernhard; Pitkänen, Asla (eds.) Brain Extracellular Matrix in Health and Disease. Progress in Brain Research: Vol. 214 (pp. 313-351). Elsevier 10.1016/B978-0-444-63486-3.00014-1
Coutinho, Leonam G; Grandgirard, Denis; Leib, Stephen L.; Agnez-Lima, Lucymara F (2013). Cerebrospinal-fluid cytokine and chemokine profile in patients with pneumococcal and meningococcal meningitis. BMC infectious diseases, 13(1), p. 326. BioMed Central 10.1186/1471-2334-13-326
Spaniol, Violeta; Wyder, Stefan; Aebi, Christoph (2013). RNA-Seq-based analysis of the physiologic cold shock-induced changes in Moraxella catarrhalis gene expression. PLoS ONE, 8(7), e68298. Public Library of Science 10.1371/journal.pone.0068298
Monney, Thierry; Grandgirard, Denis; Leib, Stephen; Hemphill, Andrew (2013). Use of a Th1 Stimulator Adjuvant for Vaccination against Neospora caninum Infection in the Pregnant Mouse Model. Pathogens, 2(2), pp. 193-208. MDPI AG 10.3390/pathogens2020193
Grandgirard, Denis; Gäumann, Rahel; Coulibaly, Boubacar; Dangy, Jean-Pierre; Sie, Ali; Junghanss, Thomas; Schudel, Hans; Pluschke, Gerd; Leib, Stephen L. (2013). The causative pathogen determines the inflammatory profile in cerebrospinal fluid and outcome in patients with bacterial meningitis. Mediators of inflammation, 2013, p. 312476. Hindawi Publishing Corp. 10.1155/2013/312476
Fritz, Jörg H; Rojas, Olga Lucia; Simard, Nathalie; McCarthy, Douglas D; Hapfelmeier, Siegfried; Rubino, Stephen; Robertson, Susan J; Larijani, Mani; Gosselin, Jean; Ivanov, Ivaylo I; Martin, Alberto; Casellas, Rafael; Philpott, Dana J; Girardin, Stephen E; McCoy, Kathy D; Macpherson, Andrew J; Paige, Christopher J; Gommerman, Jennifer L (2012). Acquisition of a multifunctional IgA+ plasma cell phenotype in the gut. Nature, 481(7380), pp. 199-203. London: Macmillan Journals Ltd. 10.1038/nature10698
Monney, Thierry; Debache, Karim; Grandgirard, Denis; Leib, Stephen L.; Hemphill, Andrew (2012). Vaccination with the recombinant chimeric antigen recNcMIC3-1-R induces a non-protective Th2-type immune response in the pregnant mouse model for N. caninum infection. Vaccine, 30(46), pp. 6588-94. Amsterdam: Elsevier 10.1016/j.vaccine.2012.08.024
Slack, Emma; Balmer, Maria Luisa; Fritz, Jörg H; Hapfelmeier, Siegfried (2012). Functional flexibility of intestinal IgA - broadening the fine line. Frontiers in immunology, 3, p. 100. Lausanne: Frontiers Research Foundation 10.3389/fimmu.2012.00100
Macpherson, Andrew J; Geuking, Markus B; Slack, Emma; Hapfelmeier, Siegfried; McCoy, Kathy D (2012). The habitat, double life, citizenship, and forgetfulness of IgA. Immunological reviews, 245(1), pp. 132-146. Oxford: Wiley-Blackwell 10.1111/j.1600-065X.2011.01072.x
Lüer, Sonja; Troller, Rolf; Jetter, Marion; Spaniol, Violeta; Aebi, Christoph (2011). Topical curcumin can inhibit deleterious effects of upper respiratory tract bacteria on human oropharyngeal cells in vitro: potential role for patients with cancer therapy induced mucositis? Supportive care in cancer, 19(6), pp. 799-806. Berlin: Springer-Verlag 10.1007/s00520-010-0894-x
Sury, Matthias D.; Vorlet-Fawer, Lorianne; Agarinis, Claudia; Yousefi, Shida; Grandgirard, Denis; Leib, Stephen L.; Christen, Stephan (2011). Restoration of Akt activity by the bisperoxovanadium compound bpV(pic) attenuates hippocampal apoptosis in experimental neonatal pneumococcal meningitis. Neurobiology of disease, 41(1), pp. 201-208. Amsterdam: Elsevier 10.1016/j.nbd.2010.09.007
Geuking, Markus B; Cahenzli, Julia; Lawson, Melissa A E; Ng, Derek C K; Slack, Emma; Hapfelmeier, Siegfried; McCoy, Kathy D; Macpherson, Andrew J (2011). Intestinal bacterial colonization induces mutualistic regulatory T cell responses. Immunity, 34(5), pp. 794-806. Cambridge, Mass.: Cell Press 10.1016/j.immuni.2011.03.021
Zimmermann, J; Mina, A; Hofer, S; Di Santo, S; Grandgirard, D; Widmer, HR; Senn, P; Leib, Stephen (2011). Grafting of neuronal precursor cells in auditory spiral ganglion loss after experimental bacterial meningitis. In: Clinical Neuroscience Meeting. Bern: Clinical Neuroscience Meeting
Woehrl, Bianca; Klein, Matthias; Grandgirard, Denis; Koedel, Uwe; Leib, Stephen (2011). Bacterial meningitis: current therapy and possible future treatment options. Expert review of anti-infective therapy, 9(11), pp. 1053-1065. London: Expert Reviews 10.1586/ERI.11.129
Hofer, Sandra; Grandgirard, Denis; Burri, Denise; Fröhlich, Tanja K.; Leib, Stephen L. (2011). Bacterial meningitis impairs hippocampal neurogenesis. Journal of neuropathology and experimental neurology, 70(10), pp. 890-899. Hagerstown, Md.: Lippincott Williams & Wilkins 10.1097/NEN.0b013e3182303f31
Monney, Thierry; Rütti, David; Schorer, Michelle; Debache, Karim; Grandgirard, Denis; Leib, Stephen L.; Hemphill, Andrew (2011). RecNcMIC3-1-R is a microneme- and rhoptry-based chimeric antigen that protects against acute neosporosis and limits cerebral parasite load in the mouse model for Neospora caninum infection. Vaccine, 29(40), pp. 6967-6975. Amsterdam: Elsevier 10.1016/j.vaccine.2011.07.038
Blaser, Cornelia; Wittwer, Matthias; Grandgirard, Denis; Leib, Stephen L. (2011). Adjunctive dexamethasone affects the expression of genes related to inflammation, neurogenesis and apoptosis in infant rat pneumococcal meningitis. PLoS ONE, 6(3), e17840. Lawrence, Kans.: Public Library of Science 10.1371/journal.pone.0017840
Margos, M.C.; Grandgirard, Denis; Leib, Stephen; Gottstein, Bruno (2011). In vitro induction of lymph node cell proliferation by mouse bone marrow dendritic cells following stimulation with different Echinococcus multilocularis antigens. Journal of helminthology, 85(2), pp. 128-137. Cambridge: Cambridge University Press 10.1017/S0022149X10000878
Spaniol, Violeta; Troller, Rolf; Schaller, André; Aebi, Christoph (2011). Physiologic cold shock of Moraxella catarrhalis affects the expression of genes involved in the iron acquisition, serum resistance and immune evasion. BMC microbiology, 11, p. 182. London: BioMed Central 10.1186/1471-2180-11-182
Barbier, François; Lebeaux, David; Hernandez, David; Delannoy, Anne-Sophie; Caro, Valérie; François, Patrice; Schrenzel, Jacques; Ruppé, Etienne; Gaillard, Kevin; Wolff, Michel; Brisse, Sylvain; Andremont, Antoine; Ruimy, Raymond (2011). High prevalence of the arginine catabolic mobile element in carriage isolates of methicillin-resistant Staphylococcus epidermidis. Journal of antimicrobial chemotherapy, 66(1), pp. 29-36. Oxford University Press 10.1093/jac/dkq410
Mégevand, C; Gervaix, A; Heininger, U; Berger, C; Aebi, C; Vaudaux, B; Kind, C; Gnehm, H-P; Hitzler, M; Renzi, G; Schrenzel, J; François, P (2010). Molecular epidemiology of the nasal colonization by methicillin-susceptible Staphylococcus aureus in Swiss children. Clinical microbiology and infection, 16(9), pp. 1414-20. Oxford: Blackwell Publishing 10.1111/j.1469-0691.2009.03090.x
Hapfelmeier, Siegfried; Macpherson, Andrew J. (2010). In remembrance of commensal intestinal microbes. Communicative & integrative biology, 3(6), pp. 569-571. Austin, Tex.: Landes Bioscience 10.4161/cib.3.6.13011
Jetter, Marion; Spaniol, Violeta; Troller, Rolf; Aebi, Christoph (2010). Down-regulation of porin M35 in Moraxella catarrhalis by aminopenicillins and environmental factors and its potential contribution to the mechanism of resistance to aminopenicillins. Journal of antimicrobial chemotherapy, 65(10), pp. 2089-96. Oxford: Oxford University Press 10.1093/jac/dkq312
Grandgirard, Denis; Leib, Stephen L. (2010). Meningitis in neonates: bench to bedside. Clinics in perinatology, 37(3), pp. 655-676. New York, N.Y.: Elsevier 10.1016/j.clp.2010.05.004
Wittwer, Matthias; Grandgirard, Denis; Rohrbach, Janine; Leib, Stephen L. (2010). Tracking the transcriptional host response from the acute to the regenerative phase of experimental pneumococcal meningitis. BMC infectious diseases, 10(176), p. 176. London: BioMed Central 10.1186/1471-2334-10-176
Blaser, Cornelia; Klein, Matthias; Grandgirard, Denis; Wittwer, Matthias; Peltola, Heikki; Weigand, Michael; Koedel, Uwe; Leib, Stephen L. (2010). Adjuvant glycerol is not beneficial in experimental pneumococcal meningitis. BMC infectious diseases, 10(84), p. 84. London: BioMed Central 10.1186/1471-2334-10-84
Grandgirard, Denis; Oberson, Kevin; Bühlmann, Angela; Gäumann, Rahel; Leib, Stephen L. (2010). Attenuation of cerebrospinal fluid inflammation by the nonbacteriolytic antibiotic daptomycin versus that by ceftriaxone in experimental pneumococcal meningitis. Antimicrobial agents and chemotherapy, 54(3), pp. 1323-1326. Washington, D.C.: American Society for Microbiology 10.1128/AAC.00812-09
Barbier, François; Ruppé, Etienne; Hernandez, David; Lebeaux, David; Francois, Patrice; Felix, Benjamin; Desprez, Adeline; Maiga, Aminata; Woerther, Paul-Louis; Gaillard, Kevin; Jeanrot, Cécile; Wolff, Michel; Schrenzel, Jacques; Andremont, Antoine; Ruimy, Raymond (2010). Methicillin-Resistant Coagulase-Negative Staphylococci in the Community: High Homology of SCCmec IVa between Staphylococcus epidermidis and Major Clones of Methicillin-Resistant Staphylococcus aureus. Journal of infectious diseases, 202(2), pp. 270-281. Oxford University Press 10.1086/653483
Ferry, T.; Uçkay, I.; Vaudaux, P.; François, P.; Schrenzel, Jacques; Harbarth, S.; Laurent, F.; Bernard, L.; Vandenesch, F.; Etienne, J.; Hoffmeyer, P.; Lew, D. (2010). Risk factors for treatment failure in orthopedic device-related methicillin-resistant Staphylococcus aureus infection. European journal of clinical microbiology & infectious diseases, 29(2), pp. 171-180. Springer 10.1007/s10096-009-0837-y
Slack, Emma; Hapfelmeier, Siegfried; Stecher, Bärbel; Velykoredko, Yuliya; Stoel, Maaike; Lawson, Melissa A E; Geuking, Markus B; Beutler, Bruce; Tedder, Thomas F; Hardt, Wolf-Dietrich; Bercik, Premysl; Verdu, Elena F; McCoy, Kathy D; Macpherson, Andrew J (2009). Innate and adaptive immunity cooperate flexibly to maintain host-microbiota mutualism. Science, 325(5940), pp. 617-620. Washington, D.C.: American Association for the Advancement of Science 10.1126/science.1172747
Spaniol, Violeta; Heiniger, Nadja; Troller, Rolf; Aebi, Christoph (2008). Outer membrane protein UspA1 and lipooligosaccharide are involved in invasion of human epithelial cells by Moraxella catarrhalis. Microbes and infection, 10(1), pp. 3-11. Paris: Elsevier Masson SAS 10.1016/j.micinf.2007.09.014
Gehre, F.; Leib, Stephen L.; Grandgirard, Denis; Kummer, Jürg; Bühlmann, Angela; Simon, Franziska; Gäumann, R.; Kharat, A. S.; Täuber, Martin G.; Tomasz, A. (2008). Essential role of choline for pneumococcal virulence in an experimental model of meningitis. Internal medicine journal, 264(2), pp. 143-154. Sydney: Blackwell 10.1111/j.1365-2796.2008.01930.x
Sury, Matthias D.; Agarinis, Claudia; Widmer, Hans-Rudolf; Leib, Stephen L.; Christen, Stephan (2008). JNK is activated but does not mediate hippocampal neuronal apoptosis in experimental neonatal pneumococcal meningitis. Neurobiology of disease, 32(1), pp. 142-150. Amsterdam: Elsevier 10.1016/J.nbd.2008.07.006
Sellner, Johann; Greeve, Isabell; Findling, Oliver; Kamm, Christian P.; Minten, Carsten; Engelhardt, Britta; Grandgirard, Denis; Leib, Stephen L.; Mattle, Heinrich P (2008). Effect of interferon-beta and atorvastatin on Th1/Th2 cytokines in multiple sclerosis. Neurochemistry international, 53(1-2), pp. 17-21. Amsterdam: Elsevier 10.1016/j.neuint.2008.04.004
Grandgirard, Denis; Loeffler, Jutta M.; Fischetti, Vincent A.; Leib, Stephen L. (2008). Phage lytic enzyme Cpl-1 for antibacterial therapy in experimental pneumococcal meningitis. Journal of infectious diseases, 197(11), pp. 1519-1522. Cary, N.C.: The University of Chicago Press 10.1086/587942
Sellner, Johann; Greeve, I; Findling, O; Grandgirard, Denis; Leib, Stephen L.; Mattle, H P (2008). Atorvastatin does not alter serum levels of sCD95 and sCD95L in multiple sclerosis. Clinical and experimental immunology, 152(2), pp. 280-284. Oxford: Blackwell Scientific Publications 10.1111/j.1365-2249.2008.03630.x
Hapfelmeier, Siegfried; Müller, Andreas J; Stecher, Bärbel; Kaiser, Patrick; Barthel, Manja; Endt, Kathrin; Eberhard, Matthias; Robbiani, Riccardo; Jacobi, Christoph A; Heikenwalder, Mathias; Kirschning, Carsten; Jung, Steffen; Stallmach, Thomas; Kremer, Marcus; Hardt, Wolf-Dietrich (2008). Microbe sampling by mucosal dendritic cells is a discrete, MyD88-independent step in DeltainvG S. Typhimurium colitis. The Journal of experimental medicine, 205(2), pp. 437-450. Rockefeller Univ. Press 10.1084/jem.20070633
Macpherson, Andrew J; Hapfelmeier, Siegfried; McCoy, Kathy D (2007). The armed truce between the intestinal microflora and host mucosal immunity. Seminars in immunology, 19(2), pp. 57-58. W.B. Saunders 10.1016/j.smim.2007.04.001
Suar, Mrutyunjay; Jantsch, Jonathan; Hapfelmeier, Siegfried; Kremer, Marcus; Stallmach, Thomas; Barrow, Paul A; Hardt, Wolf-Dietrich (2006). Virulence of broad- and narrow-host-range Salmonella enterica serovars in the streptomycin-pretreated mouse model. Infection and immunity, 74(1), pp. 632-644. American Society for Microbiology 10.1128/IAI.74.1.632-644.2006
Rhême, Céline; Ehrengruber, Markus U; Grandgirard, Denis (2005). Alphaviral cytotoxicity and its implication in vector development. Experimental physiology, 90(1), pp. 45-52. Blackwell 10.1113/expphysiol.2004.028142
Bifrare, Yoeng-Delphine; Kummer, Jürg; Joss, Philipp; Täuber, Martin G.; Leib, Stephen (2005). Brain-derived neurotrophic factor protects against multiple forms of brain injury in bacterial meningitis. Journal of infectious diseases, 191(1), pp. 40-45. The University of Chicago Press 10.1086/426399
Hapfelmeier, Siegfried; Hardt, Wolf-Dietrich (2005). A mouse model for S. typhimurium-induced enterocolitis. Trends in microbiology, 13(10), pp. 497-503. Elsevier Current Trends 10.1016/j.tim.2005.08.008
Stecher, Bärbel; Macpherson, Andrew J; Hapfelmeier, Siegfried; Kremer, Marcus; Stallmach, Thomas; Hardt, Wolf-Dietrich (2005). Comparison of Salmonella enterica serovar Typhimurium colitis in germfree mice and mice pretreated with streptomycin. Infection and immunity, 73(6), pp. 3228-3241. American Society for Microbiology 10.1128/IAI.73.6.3228-3241.2005
Hapfelmeier, Siegfried; Stecher, Bärbel; Barthel, Manja; Kremer, Marcus; Müller, Andreas J; Heikenwalder, Mathias; Stallmach, Thomas; Hensel, Michael; Pfeffer, Klaus; Akira, Shizuo; Hardt, Wolf-Dietrich (2005). The Salmonella pathogenicity island (SPI)-2 and SPI-1 type III secretion systems allow Salmonella serovar typhimurium to trigger colitis via MyD88-dependent and MyD88-independent mechanisms. Journal of immunology, 174(3), pp. 1675-1685. American Association of Immunologists
Gianinazzi, Christian; Grandgirard, Denis; Simon, Franziska; Imboden, Hans; Joss, Philipp; Täuber, Martin G.; Leib, Stephen (2004). Apoptosis of hippocampal neurons in organotypic slice culture models: direct effect of bacteria revisited. Journal of neuropathology and experimental neurology, 63(6), pp. 610-617. Lippincott Williams & Wilkins
Stecher, Bärbel; Hapfelmeier, Siegfried; Müller, Catherine; Kremer, Marcus; Stallmach, Thomas; Hardt, Wolf-Dietrich (2004). Flagella and chemotaxis are required for efficient induction of Salmonella enterica serovar Typhimurium colitis in streptomycin-pretreated mice. Infection and immunity, 72(7), pp. 4138-4150. American Society for Microbiology 10.1128/IAI.72.7.4138-4150.2004
Ehrbar, Kristin; Hapfelmeier, Siegfried; Stecher, Bärbel; Hardt, Wolf-Dietrich (2004). InvB is required for type III-dependent secretion of SopA in Salmonella enterica serovar Typhimurium. Journal of bacteriology, 186(4), pp. 1215-1219. American Society for Microbiology 10.1128/JB.186.4.1215-1219.2004
Hapfelmeier, Siegfried; Ehrbar, Kristin; Stecher, Bärbel; Barthel, Manja; Kremer, Marcus; Hardt, Wolf-Dietrich (2004). Role of the Salmonella pathogenicity island 1 effector proteins SipA, SopB, SopE, and SopE2 in Salmonella enterica subspecies 1 serovar Typhimurium colitis in streptomycin-pretreated mice. Infection and immunity, 72(2), pp. 795-809. American Society for Microbiology 10.1128/IAI.72.2.795-809.2004
Gianinazzi, Christian; Grandgirard, Denis; Imboden, Hans; Egger, Lotti; Meli, Damian N; Bifrare, Yoeng-Delphine; Joss, Philipp; Täuber, Martin G.; Borner, Christoph; Leib, Stephen (2003). Caspase-3 mediates hippocampal apoptosis in pneumococcal meningitis. Acta neuropathologica, 105(5), pp. 499-507. Springer 10.1007/s00401-003-0672-7
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