09 Interdisciplinary Units > Microscopy Imaging Center (MIC)

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Journal Article

Lux, Janine; Sánchez García, Lucía; Chaparro Fernández, Patricia; Laloli, Laura; Licheri, Manon F.; Galley, Clement; Hermans, Peter W.M.; Croucher, Nicholas J.; Veening, Jan-Willem; Dijkman, Ronald; Straume, Daniel; Hathaway, Lucy J. (2024). AmiA and AliA peptide ligands, found in Klebsiella pneumoniae, are imported into pneumococci and alter the transcriptome. Scientific reports, 14 Springer Nature 10.1038/s41598-024-63217-2

Gantenbein, Benjamin; Oswald, Katharina A C; Erbach, Georg F; Croft, Andreas S; Bermudez-Lekerika, Paola; Strunz, Franziska; Bigdon, Sebastian F; Albers, Christoph E. (2024). The Bone Morphogenetic Protein 2 Analogue L51P Enhances Spinal Fusion in Combination with BMP2 in an In Vivo Rat Tail Model. Acta biomaterialia, 177, pp. 148-156. Elsevier 10.1016/j.actbio.2024.01.039

Bürgler, Christina; Dutoit, Danielle; Radonjic-Hoesli, Susanne; Thormann, Kathrin; Lehmann, Mathias; Yousefi, Shida; Simon, Hans-Uwe; Simon, Dagmar (2024). Dupilumab normalizes correlates of lysosomal function in atopic dermatitis. JEADV Clinical Practice, 3(2), pp. 478-486. Wiley 10.1002/jvc2.307

Probst, Lukas; Laloli, Laura; Licheri, Manon Flore; Licheri, Matthias; Gultom, Mitra; Holwerda, Melle; V'kovski, Philip; Dijkman, Ronald (2023). Generation and Characterization of an Influenza D Reporter Virus. Viruses, 15(12), p. 2444. MDPI 10.3390/v15122444

Hariton, William V J; Schulze, Katja; Rahimi, Siavash; Shojaeian, Taravat; Feldmeyer, Laurence; Schwob, Roman; Overmiller, Andrew M; Sayar, Beyza; Borradori, Luca; Mahoney, Mỹ G; Galichet, Arnaud; Müller, Eliane Jasmine (2023). A desmosomal cadherin controls multipotent hair follicle stem cell quiescence and orchestrates regeneration through adhesion signaling. iScience, 26(12), p. 108568. Elsevier 10.1016/j.isci.2023.108568

Kaethner, Marc; Rennar, Georg; Gallinger, Tom; Kämpfer, Tobias; Hemphill, Andrew; Mäder, Patrick; Luque-Gómez, Ana; Schlitzer, Martin; Lundström Stadelmann, Britta (2023). In Vitro Activities of Dithiocarbamate Derivatives against Echinococcus multilocularis Metacestode Vesicles. Tropical medicine and infectious disease, 8(12) MDPI 10.3390/tropicalmed8120517

Pietilä, Riikka; Del Gaudio, Francesca; He, Liqun; Vázquez-Liébanas, Elisa; Vanlandewijck, Michael; Muhl, Lars; Mocci, Giuseppe; Bjørnholm, Katrine D; Lindblad, Caroline; Fletcher-Sandersjöö, Alexander; Svensson, Mikael; Thelin, Eric P; Liu, Jianping; van Voorden, A Jantine; Torres, Monica; Antila, Salli; Xin, Li; Karlström, Helena; Storm-Mathisen, Jon; Bergersen, Linda Hildegard; ... (2023). Molecular anatomy of adult mouse leptomeninges. Neuron, 111(23), 3745-3764.e7. Elsevier 10.1016/j.neuron.2023.09.002

Balmer, Erina A; Wirdnam, Corina D; Faso, Carmen (2023). A core UPS molecular complement implicates unique endocytic compartments at the parasite-host interface in Giardia lamblia. Virulence, 14(1), p. 2174288. Taylor & Francis 10.1080/21505594.2023.2174288

Deng, Haibin; Ge, Huixiang; Dubey, Christelle; Losmanova, Tereza; Medova, Michaela; Konstantinidou, Georgia; Mutlu, Seyran Mathilde; Birrer, Fabienne Esther; Brodie, Tess Melinda; Stroka, Deborah; Wang, Wenxiang; Peng, Ren-Wang; Dorn, Patrick; Marti, Thomas Michael (2023). An optimized protocol for the generation and monitoring of conditional orthotopic lung cancer in the KP mouse model using an adeno-associated virus vector compatible with biosafety level 1. Cancer immunology, immunotherapy : CII, 72(12), pp. 4457-4470. Springer 10.1007/s00262-023-03542-z

Schlange, Carling; Müller, Joachim; Imhof, Dennis; Hänggeli, Kai Pascal Alexander; Boubaker, Ghalia; Ortega-Mora, Luis-Miguel; Wong, Ho Ning; Haynes, Richard K; Van Voorhis, Wesley C; Hemphill, Andrew (2023). Single and combination treatment of Toxoplasma gondii infections with a bumped kinase inhibitor and artemisone in vitro and with artemiside in experimentally infected mice. Experimental parasitology, 255(108655), p. 108655. Elsevier 10.1016/j.exppara.2023.108655

Röss, Helena; Aaldijk, Dea; Vladymyrov, Mykhailo; Odriozola, Adolfo; Djonov, Valentin (2023). Transluminal Pillars-Their Origin and Role in the Remodelling of the Zebrafish Caudal Vein Plexus. International journal of molecular sciences, 24(23) MDPI 10.3390/ijms242316703

Stojanovski, Klement; Gheorghe, Ioana; Lenart, Peter; Lanjuin, Anne; Mair, William B; Towbin, Benjamin D (2023). Maintenance of appropriate size scaling of the C. elegans pharynx by YAP-1. Nature Communications, 14(1), p. 7564. Springer Nature 10.1038/s41467-023-43230-1

Amodeo, Simona; Bregy, Irina; Ochsenreiter, Torsten (2023). Mitochondrial genome maintenance - the kinetoplast story. FEMS microbiology reviews, 47(6) Blackwell Publishing Ltd 10.1093/femsre/fuac047

Bonnet, Diane Marie Valerie; Tirot, Louis; Grob, Stefan; Jullien, Pauline Emilie (2023). Methylome response to proteasome inhibition by the Pseudomonas syringae virulence factor Syringolin A. Molecular Plant-Microbe Interactions, 36(11), pp. 693-704. American Phytopathological Society 10.1094/MPMI-06-23-0080-R

Saltarin, Federico; Wegmüller, Adrian; Bejarano, Leire; Ildiz, Eco Su; Zwicky, Pascale; Vianin, Andréj; Spadin, Florentin; Soukup, Klara; Wischnewski, Vladimir; Engelhardt, Britta; Deutsch, Urban; Marques, Ines J.; Frenz, Martin; Joyce, Johanna A.; Lyck, Ruth (2023). Compromised Blood-Brain Barrier Junctions Enhance Melanoma Cell Intercalation and Extravasation. Cancers, 15(20), p. 5071. MDPI AG 10.3390/cancers15205071

Thiede, Jan; Rothenbühler, Simon; Iacovache, Ioan; Langenegger, Simon M; Zuber, Benoît; Häner, Robert (2023). Supramolecular assembly of pyrene-DNA conjugates: influence of pyrene substitution pattern and implications for artificial LHCs. Organic & biomolecular chemistry, 21(39), pp. 7908-7912. Royal Society of Chemistry 10.1039/d3ob01375h

Gagliardi, Paolo Armando; Grädel, Benjamin; Jacques, Marc-Antoine; Hinderling, Lucien; Ender, Pascal; Cohen, Andrew R; Kastberger, Gerald; Pertz, Olivier; Dobrzynski, Maciej (2023). Automatic detection of spatio-temporal signaling patterns in cell collectives. The Journal of cell biology, 222(10) Rockefeller Institute Press 10.1083/jcb.202207048

Blaskovic, Sanja; Anagnostopoulou, Pinelopi; Borisova, Elena; Schittny, Dominik; Donati, Yves; Haberthür, David; Zhou-Suckow, Zhe; Mall, Marcus A; Schlepütz, Christian M; Stampanoni, Marco; Barazzone-Argiroffo, Constance; Schittny, Johannes C (2023). Airspace Diameter Map-A Quantitative Measurement of All Pulmonary Airspaces to Characterize Structural Lung Diseases. Cells, 12(19) MDPI 10.3390/cells12192375

Mapunda, Josephine A; Pareja, Javier; Vladymyrov, Mykhailo; Bouillet, Elisa; Hélie, Pauline; Pleskač, Petr; Barcos, Sara; Andrae, Johanna; Vestweber, Dietmar; McDonald, Donald M; Betsholtz, Christer; Deutsch, Urban; Proulx, Steven T; Engelhardt, Britta (2023). VE-cadherin in arachnoid and pia mater cells serves as a suitable landmark for in vivo imaging of CNS immune surveillance and inflammation. Nature communications, 14(1), p. 5837. Nature Publishing Group 10.1038/s41467-023-41580-4

Wang, Lei; Jäggi, Simon; Cofer, Tristan M; Waterman, Jamie M; Walthert, Mario; Glauser, Gaétan; Erb, Matthias (2023). Immature leaves are the dominant volatile-sensing organs of maize. Current biology, 33(17), 3679-3689.e3. Cell Press 10.1016/j.cub.2023.07.045

Esposito, Roberta; Lanzos, Andrés; Uroda, Tina; Ramnarayanan, Sunandini; Büchi, Isabel; Polidori, Taisia; Guillen-Ramirez, Hugo; Mihaljevic, Ante; Merlin, Bernard Mefi; Mela, Lia; Zoni, Eugenio; Hovhannisyan, Lusine; McCluggage, Finn; Medo, Matúš; Basile, Giulia; Meise, Dominik F; Zwyssig, Sandra; Wenger, Corina; Schwarz, Kyriakos; Vancura, Adrienne; ... (2023). Author Correction: Tumour mutations in long noncoding RNAs enhance cell fitness. Nature communications, 14(1), p. 5463. Nature Publishing Group 10.1038/s41467-023-41288-5

Lyck, Ruth; Nishihara, Hideaki; Aydin, Sidar; Soldati, Sasha; Engelhardt, Britta (2023). Modeling Brain Vasculature Immune Interactions In Vitro. Cold Spring Harbor perspectives in medicine, 13(9), a041185. Cold Spring Harbor Laboratory Press 10.1101/cshperspect.a041185

Vannetti, Stefania M; Wynne, James W; English, Chloe; Huynh, Christine; Knüsel, Ralph; de Sales-Ribeiro, Carolina; Widmer, Maro; Delalay, Gary; Schmidt-Posthaus, Heike (2023). Amoeba species colonizing the gills of rainbow trout (Oncorhynchus mykiss) in Swiss aquaculture. Journal of fish diseases, 46(9), pp. 987-999. Wiley 10.1111/jfd.13819

Chopy, Mathilde; Binaghi, Marta; Cannarozzi, Gina; Halitschke, Rayko; Boachon, Benoît; Heutink, Roel; Bomzan, Dikki Pedenla; Jäggi, Lea; van Geest, Geert; Verdonk, Julian C; Kuhlemeier, Cris (2023). A single MYB transcription factor with multiple functions during flower development. New Phytologist, 239(5), pp. 2007-2025. Wiley 10.1111/nph.19096

Smith, Hannah J; Lanjuin, Anne; Sharma, Arpit; Prabhakar, Aditi; Nowak, Ewelina; Stine, Peter G; Sehgal, Rohan; Stojanovski, Klement; Towbin, Benjamin D; Mair, William B (2023). Neuronal mTORC1 inhibition promotes longevity without suppressing anabolic growth and reproduction in C. elegans. PLoS genetics, 19(9), e1010938. Public Library of Science 10.1371/journal.pgen.1010938

Pilotto, Federica; Douthwaite, Christopher; Diab, Rim; Ye, XiaoQian; Al Qassab, Zahraa; Tietje, Christoph; Mounassir, Meriem; Odriozola, Adolfo; Thapa, Aishwarya; Buijsen, Ronald A M; Lagache, Sophie; Uldry, Anne-Christine; Heller, Manfred; Müller, Stefan; van Roon-Mom, Willeke M C; Zuber, Benoît; Liebscher, Sabine; Saxena, Smita (2023). Early molecular layer interneuron hyperactivity triggers Purkinje neuron degeneration in SCA1. Neuron, 111(16), 2523-2543.e10. Elsevier 10.1016/j.neuron.2023.05.016

van Os, Lisette; Yeoh, Wen Jie; Witz, Guillaume; Ferrari, Dario; Krebs, Philippe; Chandorkar, Yashoda; Zeinali, Soheila; Sengupta, Arunima; Guenat, Olivier (2023). Immune cell extravasation in an organ-on-chip to model lung inflammation. European journal of pharmaceutical sciences, 187, p. 106485. Elsevier 10.1016/j.ejps.2023.106485

Cheng, Xin; Raissig, Michael T. (2023). From grasses to succulents - development and function of distinct stomatal subsidiary cells. New Phytologist, 239(1), pp. 47-53. Wiley 10.1111/nph.18951

Amodeo, Simona; Bregy, Irina; Hoffmann, Anneliese; Fradera-Sola, Albert; Kern, Mara; Baudouin, Hélène; Zuber, Benoît; Butter, Falk; Ochsenreiter, Torsten (2023). Characterization of two novel proteins involved in mitochondrial DNA anchoring in Trypanosoma brucei. PLoS pathogens, 19(7), e1011486. Public Library of Science 10.1371/journal.ppat.1011486

Esposito, Roberta; Lanzós, Andrés; Uroda, Tina; Ramnarayanan, Sunandini; Büchi, Isabel; Polidori, Taisia; Guillen-Ramirez, Hugo; Mihaljevic, Ante; Merlin, Bernard Mefi; Lia, Mela; Zoni, Eugenio; Hovhannisyan, Lusine; McCluggage, Finn; Medo, Matúš; Basile, Giulia; Meise, Dominik F; Zwyssig, Sandra; Wenger, Corina; Schwarz, Kyriakos; Vancura, Adrienne; ... (2023). Tumour mutations in long noncoding RNAs enhance cell fitness. Nature communications, 14(1), p. 3342. Nature Publishing Group 10.1038/s41467-023-39160-7

Lazarevic, Ivana; Soldati, Sasha; Mapunda, Josephine A; Rudolph, Henriette; Rosito, Maria; Cardoso de Oliveira, Alex; Enzmann, Gaby; Nishihara, Hideaki; Ishikawa, Hiroshi; Tenenbaum, Tobias; Schroten, Horst; Engelhardt, Britta (2023). The choroid plexus acts as an immune cell reservoir and brain entry site in experimental autoimmune encephalomyelitis. Fluids and barriers of the CNS, 20(1), p. 39. BioMed Central 10.1186/s12987-023-00441-4

Koch, Jonas P; Roth, Selina M; Quintin, Aurélie; Gavini, Jacopo; Orlando, Eleonora; Riedo, Rahel; Pozzato, Chiara; Hayrapetyan, Liana; Aebersold, Ruedi; Stroka, Deborah M; Aebersold, Daniel M; Medo, Matúš; Zimmer, Yitzhak; Medova, Michaela (2023). A DNA-PK phosphorylation site on MET regulates its signaling interface with the DNA damage response. Oncogene, 42(26), pp. 2113-2125. Nature Publishing Group 10.1038/s41388-023-02714-6

Labode, Jonas; Haberthür, David; Hlushchuk, Ruslan; Regin, Yannick; Gie, Andre George; Salaets, Thomas; Toelen, Jaan; Mühlfeld, Christian (2023). Location-specific pathology analysis of the monopodial pulmonary vasculature in a rabbit model of bronchopulmonary dysplasia-A pilot study. Physiological reports, 11(12), e15747. The American Physiological Society 10.14814/phy2.15747

Ghaznavi, Parastoo; Kadlag, Yogita; Haberthür, David; Hlushchuk, Ruslan; Leya, Ingo (2023). Is μCT irradiation nondestructive? A noble gas study on matrix samples from the CV3 chondrite Allende. Meteoritics & planetary science, 58(6), pp. 897-900. Wiley 10.1111/maps.13996

Aydin, Sidar; Pareja, Javier; Schallenberg, Vivianne M; Klopstein, Armelle; Gruber, Thomas; Page, Nicolas; Bouillet, Elisa; Blanchard, Nicolas; Liblau, Roland; Körbelin, Jakob; Schwaninger, Markus; Johnson, Aaron J; Schenk, Mirjam; Deutsch, Urban; Merkler, Doron; Engelhardt, Britta (2023). Antigen recognition detains CD8+ T cells at the blood-brain barrier and contributes to its breakdown. Nature communications, 14(1), p. 3106. Nature Publishing Group 10.1038/s41467-023-38703-2

Hemphill, Andrew; Müller, Joachim (2023). Toxoplasma gondii infection: Novel emerging therapeutic targets. Expert opinion on therapeutic targets, 27(4-5), pp. 293-304. Taylor & Francis 10.1080/14728222.2023.2217353

Soldati, Sasha; Bär, Alexander; Vladymyrov, Mykhailo; Glavin, Dale; McGrath, James L; Gosselet, Fabien; Nishihara, Hideaki; Goelz, Susan; Engelhardt, Britta (2023). High levels of endothelial ICAM-1 prohibit natalizumab mediated abrogation of CD4+ T cell arrest on the inflamed BBB under flow in vitro. Journal of neuroinflammation, 20(1), p. 123. BioMed Central 10.1186/s12974-023-02797-8

Sivabalakrishnan, Kokila; Thanihaichelvan, Murugathas; Tharsan, Annathurai; Eswaramohan, Thamboe; Ravirajan, Punniamoorthy; Hemphill, Andrew; Ramasamy, Ranjan; Surendran, Sinnathamby N (2023). Resistance to the larvicide temephos and altered egg and larval surfaces characterize salinity-tolerant Aedes aegypti. Scientific Reports, 13(1), p. 8160. Nature Publishing Group 10.1038/s41598-023-35128-1

Ma, Andi; Sun, Yukai; Ogbodu, Racheal O; Xiao, Ling; Deng, Haibin; Zhou, Hui (2023). Correction to: Identification of biomarkers of hepatocellular carcinoma gene prognosis based on the immune‑related lncRNA signature of transcriptome data. Functional & integrative genomics, 23(2), p. 151. Springer 10.1007/s10142-023-01087-z

Nunes, Tiago D G; Berg, Lea S; Slawinska, Magdalena W; Zhang, Dan; Redt, Leonie; Sibout, Richard; Vogel, John P; Laudencia-Chingcuanco, Debbie; Jesenofsky, Barbara; Lindner, Heike; Raissig, Michael T (2023). Regulation of hair cell and stomatal size by a hair cell-specific peroxidase in the grass Brachypodium distachyon. Current biology, 33(9), 1844-1854.e6. Cell Press 10.1016/j.cub.2023.03.089

Radecke, Julika; Seeger, Raphaela; Kádková, Anna; Laugks, Ulrike; Khosrozadeh, Mohammadamin; Goldie, Kenneth N; Lučić, Vladan; Sørensen, Jakob B; Zuber, Benoît (2023). Morphofunctional changes at the active zone during synaptic vesicle exocytosis. EMBO reports, 24(5), e55719. Nature Publishing Group 10.15252/embr.202255719

Spera, Irene; Cousin, Nikola; Ries, Miriam; Kedracka, Anna; Castillo, Alina; Aleandri, Simone; Vladymyrov, Mykhailo; Mapunda, Josephine A; Engelhardt, Britta; Luciani, Paola; Detmar, Michael; Proulx, Steven T (2023). Open pathways for cerebrospinal fluid outflow at the cribriform plate along the olfactory nerves. EBioMedicine, 91(104558), p. 104558. Elsevier 10.1016/j.ebiom.2023.104558

Nałęcz-Jawecki, Paweł; Gagliardi, Paolo Armando; Kochańczyk, Marek; Dessauges, Coralie; Pertz, Olivier; Lipniacki, Tomasz (2023). The MAPK/ERK channel capacity exceeds 6 bit/hour. PLoS computational biology, 19(5), e1011155. Public Library of Science 10.1371/journal.pcbi.1011155

Suter, Corinne; Colakovic, Minela; Bieri, Jan; Gultom, Mitra; Dijkman, Ronald; Ros, Carlos (2023). Globoside and the mucosal pH mediate parvovirus B19 entry through the epithelial barrier. PLoS pathogens, 19(5), e1011402. Public Library of Science 10.1371/journal.ppat.1011402

Caldwell, Jessica; Loussert-Fonta, Céline; Toullec, Gaëlle; Heidelberg Lyndby, Niclas; Haenni, Beat; Taladriz-Blanco, Patricia; Espiña, Begoña; Rothen-Rutishauser, Barbara; Petri-Fink, Alke (2023). Correlative Light, Electron Microscopy and Raman Spectroscopy Workflow To Detect and Observe Microplastic Interactions with Whole Jellyfish. Environmental science & technology, 57(16), pp. 6664-6672. ACS Publications 10.1021/acs.est.2c09233

Künzi, Lisa; Ryter, Sarah; Cornelius, Andreas; Leni, Zaira; Baumlin, Nathalie; Salathe, Matthias; Walser, Marcel; Engler, Olivier; Geiser, Marianne (2023). Transport of Designed Ankyrin Repeat Proteins through reconstituted human bronchial epithelia and protection against SARS-CoV-2. Scientific Reports, 13(1), p. 5537. Nature Publishing Group 10.1038/s41598-023-32269-1

Müller, Joachim; Schlange, Carling; Heller, Manfred; Uldry, Anne-Christine; Braga-Lagache, Sophie; Haynes, Richard K; Hemphill, Andrew (2023). Proteomic characterization of Toxoplasma gondii ME49 derived strains resistant to the artemisinin derivatives artemiside and artemisone implies potential mode of action independent of ROS formation. International journal for parasitology. Drugs and drug resistance, 21, pp. 1-12. Elsevier 10.1016/j.ijpddr.2022.11.005

Ma, Andi; Sun, Yukai; Ogbodu, Racheal O; Xiao, Ling; Deng, Haibin; Zhou, Hui (2023). Identification of biomarkers of hepatocellular carcinoma gene prognosis based on the immune-related lncRNA signature of transcriptome data. Functional & integrative genomics, 23(2), p. 104. Springer 10.1007/s10142-023-01019-x

Ferrari, Dario; Sengupta, Arunima; Heo, Lyong; Pethö, Laszlo; Michler, Johann; Geiser, Thomas; de Jesus Perez, Vinicio A; Kuebler, Wolfgang M; Zeinali, Soheila; Guenat, Olivier T (2023). Effects of biomechanical and biochemical stimuli on angio- and vasculogenesis in a complex microvasculature-on-chip. iScience, 26(3), p. 106198. Elsevier 10.1016/j.isci.2023.106198

Ramseier, Jessica; Imhof, Dennis; Hänggeli, Kai Pascal Alexander; Anghel, Nicoleta; Boubaker, Ghalia; Beteck, Richard M; Ortega-Mora, Luis-Miguel; Haynes, Richard K; Hemphill, Andrew (2023). In Vitro versus in Mice: Efficacy and Safety of Decoquinate and Quinoline-O-Carbamate Derivatives against Experimental Infection with Neospora caninum Tachyzoites. Pathogens, 12(3) MDPI AG 10.3390/pathogens12030447

Orlando, Eleonora; Medo, Matúš; Bensimon, Ariel; Quintin, Aurélie; Riedo, Rahel; Roth, Selina M; Riether, Carsten; Marti, Thomas M; Aebersold, Daniel M; Medová, Michaela; Aebersold, Ruedi; Zimmer, Yitzhak (2023). Correction: An oncogene addiction phosphorylation signature and its derived scores inform tumor responsiveness to targeted therapies. Cellular and molecular life sciences : CMLS, 80(4), p. 85. Springer 10.1007/s00018-023-04725-8

C Ivan, Daniela; Berve, Kristina Carolin; Walthert, Sabrina; Monaco, Gianni; Borst, Katharina; Bouillet, Elisa; Ferreira, Filipa; Lee, Henry; Steudler, Jasmin; Buch, Thorsten; Prinz, Marco; Engelhardt, Britta; Locatelli, Giuseppe (2023). Insulin-like growth factor-1 receptor controls the function of CNS-resident macrophages and their contribution to neuroinflammation. Acta neuropathologica communications, 11(1), p. 35. 10.1186/s40478-023-01535-8

Sengupta, Arunima; Dorn, Aurélien; Jamshidi, Mohammad; Schwob, Magali; Hassan, Widad; De Maddalena, Lea Lara; Hugi, Andreas; Stucki, Andreas O.; Dorn, Patrick; Marti, Thomas M.; Wisser, Oliver; Stucki, Janick D.; Krebs, Tobias; Hobi, Nina; Guenat, Olivier T. (2023). A multiplex inhalation platform to model in situ like aerosol delivery in a breathing lung-on-chip. Frontiers in Pharmacology, 14, p. 1114739. Frontiers 10.3389/fphar.2023.1114739

Ayoub, Nooraldeen; Roth, Patrick; Ucurum, Zöhre; Fotiadis, Dimitrios; Hirschi, Stephan (2023). Structural and biochemical insights into His-tag-induced higher-order oligomerization of membrane proteins by cryo-EM and size exclusion chromatography. Journal of structural biology, 215(1), p. 107924. Elsevier 10.1016/j.jsb.2022.107924

Birrer, Fabienne; Brodie, Tess; Stroka, Deborah (2023). OMIP-088: Twenty-target imaging mass cytometry panel for major cell populations in mouse formalin fixed paraffin embedded liver. Cytometry Part A, 103(3), pp. 189-192. Wiley 10.1002/cyto.a.24714

Gradauskaite, Vaiva; Inglebert, Marine; Doench, John; Scherer, Melanie; Dettwiler, Martina; Wyss, Marianne; Shrestha, Neeta; Rottenberg, Sven; Plattet, Philippe (2023). LRP6 Is a Functional Receptor for Attenuated Canine Distemper Virus. mBio, 14(1), e0311422. American Society for Microbiology 10.1128/mbio.03114-22

Yang, Haitang; Gao, Yanyun; Xu, Duo; Xu, Ke; Shun-Qing, Liang; Yang, Zhang; Scherz, Amina; Hall, Sean R R; Forster, Stefan; Berezowska, Sabina; Yao, Feng; Ochsenbein, Adrian F; Marti, Thomas M; Kocher, Gregor J; Schmid, Ralph A; Dorn, Patrick; Peng, Ren-Wang (2023). MEK1 drives oncogenic signaling and interacts with PARP1 for genomic and metabolic homeostasis in malignant pleural mesothelioma. Cell death discovery, 9(1), p. 55. Nature 10.1038/s41420-023-01307-2

Kalbermatter, David; Jeckelmann, Jean-Marc; Wyss, Marianne; Shrestha, Neeta; Pliatsika, Dimanthi; Riedl, Rainer; Lemmin, Thomas; Plattet, Philippe; Fotiadis, Dimitrios (2023). Structure and supramolecular organization of the canine distemper virus attachment glycoprotein. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 120(6), e2208866120. National Academy of Sciences NAS 10.1073/pnas.2208866120

Triscott, Joanna; Reist, Matthias; Küng, Lukas; Moselle, Francielle C; Lehner, Marika; Gallon, John; Ravi, Archna; Arora, Gurpreet K; De Brot, Simone; Lundquist, Mark; Gallart-Ayala, Hector; Ivanisevic, Julijana; Piscuoglio, Salvatore; Cantley, Lewis C; Emerling, Brooke M; Rubin, Mark A (2023). PI5P4Kα supports prostate cancer metabolism and exposes a survival vulnerability during androgen receptor inhibition. Science Advances, 9(5), eade8641. American Association for the Advancement of Science 10.1126/sciadv.ade8641

Corona Ramírez, Andrea; Lee, Kang Soo; Odriozola, Adolfo; Kaminek, Marek; Stocker, Roman; Zuber, Benoît; Junier, Pilar (2023). Multiple roads lead to Rome: unique morphology and chemistry of endospores, exospores, myxospores, cysts and akinetes in bacteria. Microbiology, 169(2) Microbiology Society 10.1099/mic.0.001299

McKown, Katelyn H; Anleu Gil, M Ximena; Mair, Andrea; Xu, Shou-Ling; Raissig, Michael T.; Bergmann, Dominique C (2023). Expanded roles and divergent regulation of FAMA in Brachypodium and Arabidopsis stomatal development. The Plant Cell, 35(2), pp. 756-775. American Society of Plant Biologists 10.1093/plcell/koac341

Hosseini, Aref; Stojkov, Darko; Fettrelet, Timothée; Bilyy, Rostyslav; Yousefi, Shida; Simon, Hans-Uwe (2023). Transcriptional Insights of Oxidative Stress and Extracellular Traps in Lung Tissues of Fatal COVID-19 Cases. International journal of molecular sciences, 24(3) MDPI 10.3390/ijms24032646

Stojkov, Darko; Claus, Meike J; Kozlowski, Evelyne; Oberson, Kevin; Schaeren, Olivier P; Benarafa, Charaf; Yousefi, Shida; Simon, Hans-Uwe (2023). NET formation is independent of gasdermin D and pyroptotic cell death. Science signaling, 16(769), eabm0517. American Association for the Advancement of Science 10.1126/scisignal.abm0517

Rothenbühler, Simon; Iacovache, Ioan; Langenegger, Simon M.; Zuber, Benoît; Häner, Robert (2023). Complex DNA Architectonics─Self-Assembly of Amphiphilic Oligonucleotides into Ribbons, Vesicles, and Asterosomes. Bioconjugate chemistry, 34(1), pp. 70-77. American Chemical Society 10.1021/acs.bioconjchem.2c00077

Schröder, Jens A; Bonnet, Diane M V; Jullien, Pauline E (2023). Non-cell-autonomous small RNA silencing in Arabidopsis female gametes. Current biology, 33(1), 183-188.e3. Cell Press 10.1016/j.cub.2022.11.044

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Jakob, Martin; Hoffmann, Anneliese; Amodeo, Simona; Peitsch, Camille; Zuber, Benoît; Ochsenreiter, Torsten (2016). Mitochondrial growth during the cell cycle of Trypanosoma brucei bloodstream forms. Scientific Reports, 6(36565), p. 36565. Nature Publishing Group 10.1038/srep36565

Wolfmeier, Heidi Annemarie; Radecke, Julika; Schönauer, Roman; Köffel, René; Babiychuk, Victoria; Drücker, Patrick; Hathaway, Lucy Jane; Mitchell, Timothy J; Zuber, Benoît; Draeger, Annette; Babiychuk, Eduard (2016). Active release of pneumolysin prepores and pores by mammalian cells undergoing a Streptococcus pneumoniae attack. Biochimica et biophysica acta (BBA) - general subjects, 1860(11 Pt A), pp. 2498-2509. Elsevier 10.1016/j.bbagen.2016.07.022

Fernandez Tenorio, Miguel; Niggli, Ernst (2016). Real-time intra-store confocal Ca2+ imaging in isolated mouse cardiomyocytes. Cell calcium, 60(5), pp. 331-340. Elsevier 10.1016/j.ceca.2016.07.002

Kocbek, Vida; Grandi, Giovanni; Blank, Fabian; Wotzkow Alvarez, Carlos; Bersinger, Nick A.; Mueller, Michael D.; Kyo, Satoru; Mc Kinnon, Brett D. (2016). TNFα-induced IKKβ complex activation influences epithelial, but not stromal cell survival in endometriosis. Molecular human reproduction MHR, 22(11), pp. 768-777. Oxford University Press 10.1093/molehr/gaw054

Plaisance, Isabelle; Perruchoud, Stéphanie; Fernandez Tenorio, Miguel; Gonzales, Christine; Ounzain, Samir; Ruchat, Patrick; Nemir, Mohamed; Niggli, Ernst; Pedrazzini, Thierry (2016). Cardiomyocyte Lineage Specification in Adult Human Cardiac Precursor Cells Via Modulation of Enhancer-Associated Long Noncoding RNA Expression. JACC. Basic to translational science, 1(6), pp. 472-493. Elsevier 10.1016/j.jacbts.2016.06.008

Bonsmann, A; Stoffel, Michael Hubert; Burkhart, M; Hatt, J-M (2016). Anatomical Atlas of the Quail's Ear (Coturnix coturnix). Anatomia, histologia, embryologia, 45(5), pp. 399-404. Wiley-Blackwell 10.1111/ahe.12198

Bongoni, Anjan; Klymiuk, Nikolai; Wolf, Eckhard; Ayares, David; Rieben, Robert; Cowan, Peter J (2016). Transgenic Expression of Human Thrombomodulin Inhibits HMGB1-Induced Porcine Aortic Endothelial Cell Activation. Transplantation, 100(9), pp. 1871-1879. Lippincott Williams & Wilkins 10.1097/TP.0000000000001188

Kaiser, Gesine; De Niz Hidalgo, Mariana Isabel; Zuber, Benoît; Burda, Paul-Christian; Kornmann, Benoît; Limenitakis Stanway, Rebecca; Heussler, Volker (2016). High resolution microscopy reveals an unusual architecture of the Plasmodium berghei endoplasmic reticulum. Molecular microbiology, 102(5), pp. 775-791. Blackwell Science 10.1111/mmi.13490

Stucki, David; Ruegsegger, Céline; Steiner, Silvio; Radecke, Julika; Murphy, MP; Zuber, Benoît; Saxena, Smita (2016). Mitochondrial impairments contribute to Spinocerebellar ataxia type 1 progression and can be ameliorated by the mitochondria-targeted antioxidant MitoQ. Free radical biology & medicine, 97, pp. 427-440. Elsevier 0.1016/j.freeradbiomed.2016.07.005

Trikin, Roman; Doiron, Nicholas; Hoffmann, Anneliese; Haenni, Beat; Jakob, Martin; Schnaufer, Achim; Schimanski, Bernd; Zuber, Benoît; Ochsenreiter, Torsten (2016). Correction: TAC102 Is a Novel Component of the Mitochondrial Genome Segregation Machinery in Trypanosomes. PLoS pathogens, 12(7), e1005750. Public Library of Science 10.1371/journal.ppat.1005750

Mock, Thomas; Mehinagic, Kemal; Menzi, Fiona; Studer, Eveline; Oevermann, Anna; Stoffel, Michael Hubert; Drögemüller, Cord; Meylan, Mireille; Regenscheit, Nadine (2016). Clinicopathological Phenotype of Autosomal Recessive Cholesterol Deficiency in Holstein Cattle. Journal of veterinary internal medicine, 30(4), pp. 1369-1375. Wiley-Blackwell 10.1111/jvim.13976

Baum, Oliver; Torchetti, Eleonora; Malik, Corinna; Hoier, Birgitte; Walker, Meegan; Walker, Philip J; Odriozola Quesada, Adolfo; Graber, Franziska; Tschanz, Stefan A.; Bangsbo, Jens; Hoppeler, Hans-Heinrich; Askew, Christopher D; Hellsten, Ylva (2016). Capillary ultrastructure and mitochondrial volume density in skeletal muscle in relation to reduced exercise capacity of patients with intermittent claudication. American journal of physiology - regulatory, integrative and comparative physiology, 310(10), R943-R951. American Physiological Society 10.1152/ajpregu.00480.2015

Trikin, Roman; Doiron, Nicholas; Hoffmann, Anneliese; Haenni, Beat; Jakob, Martin; Schnaufer, Achim; Schimanski, Bernd; Zuber, Benoît; Ochsenreiter, Torsten (2016). TAC102 Is a Novel Component of the Mitochondrial Genome Segregation Machinery in Trypanosomes. PLoS pathogens, 12(5), e1005586. Public Library of Science 10.1371/journal.ppat.1005586

Ruegsegger, Céline; Stucki, David; Steiner, Silvio; Angliker, Nico; Radecke, Julika; Keller, Eva; Zuber, Benoît; Rüegg, Markus A; Saxena, Smita (2016). Impaired mTORC1-Dependent Expression of Homer-3 Influences SCA1 Pathophysiology. Neuron, 89(1), pp. 129-146. Cell Press 10.1016/j.neuron.2015.11.033

Fusco, Ludovico; Lefort, Riwal; Smith, Kevin; Benmansour, Fethallah; Gonzalez, German; Barillari, Caterina; Rinn, Bernd; Fleuret, Francois; Fua, Pascal; Pertz, Olivier (2016). Computer vision profiling of neurite outgrowth dynamics reveals spatiotemporal modularity of Rho GTPase signaling. Journal of cell biology, 212(1), pp. 91-111. Rockefeller Institute Press 10.1083/jcb.201506018

Blatti-Cardinaux, Laure Sarah Pauline; Pisoni, Giuliano; Stoffel, Michael Hubert; Zanoni, Reto Giacomo; Zahno, Marie-Luise; Bertoni, Giuseppe (2016). Generation of a molecular clone of an attenuated lentivirus, a first step in understanding cytopathogenicity and virulence. Virology, 487, pp. 50-58. Academic Press 10.1016/j.virol.2015.09.027

Agarwal, Hitesh K.; Janicek, Radoslav; Chi, San-Hui; Perry, Joseph W.; Niggli, Ernst; Ellis-Davies, Graham C. R. (2016). Calcium Uncaging with Visible Light. Journal of the American Chemical Society, 138(11), pp. 3687-3693. 10.1021/jacs.5b11606

Martin, Katrin; Reimann, Andreas; Fritz, Rafael D; Ryu, Hyunryul; Jeon, Noo Li; Pertz, Olivier (2016). Spatio-temporal co-ordination of RhoA, Rac1 and Cdc42 activation during prototypical edge protrusion and retraction dynamics. Scientific Reports, 6, p. 21901. Nature Publishing Group 10.1038/srep21901

Hlushchuk, Ruslan; Brönnimann, Daniel; Correa Shokiche, Carlos; Schaad, Laura; Triet, Ramona; Jazwinska, Anna; Tschanz, Stefan A.; Djonov, Valentin (2016). Zebrafish Caudal Fin Angiogenesis Assay-Advanced Quantitative Assessment Including 3-Way Correlative Microscopy. PLoS ONE, 11(3), e0149281. Public Library of Science 10.1371/journal.pone.0149281

De Niz Hidalgo, Mariana Isabel; Ullrich, Ann-Katrin; Heiber, Arlett; Blancke Soares, Alexandra; Pick, Christian; Lyck, Ruth; Keller, Derya; Kaiser, Gesine; Prado, Monica; Flemming, Sven; Del Portillo, Hernando; Janse, Chris J; Heussler, Volker; Spielmann, Tobias (2016). The machinery underlying malaria parasite virulence is conserved between rodent and human malaria parasites. Nature communications, 7, p. 11659. Nature Publishing Group 10.1038/ncomms11659

Iacovache, Mircea Ioan; De Carlo, Sacha; Cirauqui, Nuria; Dal Peraro, Matteo; van der Goot, F Gisou; Zuber, Benoît (2016). Cryo-EM structure of aerolysin variants reveals a novel protein fold and the pore-formation process. Nature communications, 7, p. 12062. Nature Publishing Group 10.1038/ncomms12062

Stojiljkovic, Ana; Kuehni-Boghenbor, K.; Gaschen, Véronique; Schüpbach, Gertraud; Mevissen, Meike; Kinnear, C.; Möller, A.-M.; Stoffel, Michael Hubert (2016). High-content analysis of factors affecting gold nanoparticle uptake by neuronal and microglial cells in culture. Nanoscale, 8(37), pp. 16650-16661. Royal Society of Chemistry 10.1039/C6NR05723C

Geisshüsler, Helena; Marti, Eliane Isabelle; Stoffel, Michael Hubert; Kühni, Kathrin; Stojiljkovic, Ana; von Tscharner, Claudia; Vidondo Curras, Beatriz; Gerber, Vinzenz; Koch, Christoph (2016). Quantitative analysis of infiltrating immune cells and bovine papillomavirus type 1 E2-positive cells in equine sarcoids. Veterinary journal, 216, pp. 45-52. Elsevier 10.1016/j.tvjl.2016.06.016

Jayadev Kamat, Pranitha; Vandenberghe, Stijn; Christen, Stephan; Bongoni, Anjan; Meier, Bernhard; Rieben, Robert; Khattab, Ahmed Aziz (2016). Dexrazoxane Shows No Protective Effect in the Acute Phase of Reperfusion during Myocardial Infarction in Pigs. PLoS ONE, 11(12), e0168541. Public Library of Science 10.1371/journal.pone.0168541

Baum, Oliver; Gübeli, Jennifer; Frese, Sebastian; Torchetti, Eleonora; Malik, Corinna; Odriozola Quesada, Adolfo; Graber, Franziska; Hoppeler, Hans-Heinrich; Tschanz, Stefan A. (2015). Angiogenesis-related ultrastructural changes to capillaries in human skeletal muscle in response to endurance exercise. Journal of applied physiology, 119(10), pp. 1118-1126. American Physiological Society 10.1152/japplphysiol.00594.2015

Knudsen, Lars; Atochina-Vasserman, Elena N; Massa, Christopher B; Birkelbach, Bastian; Guo, Chang-Jiang; Scott, Pamela; Haenni, Beat; Beers, Michael F; Ochs, Matthias; Gow, Andrew J (2015). The role of inducible nitric oxide synthase for interstitial remodeling of alveolar septa in surfactant protein D-deficient mice. American journal of physiology - lung cellular and molecular physiology, 309(9), L959-L969. American Physiological Society 10.1152/ajplung.00017.2015

Banz Wälti, Yara; Item, Gian-Marco; Vogt, Andreas; Rieben, Robert; Candinas, Daniel; Beldi, Guido (2015). Endothelial- and Platelet-Derived Microparticles Are Generated During Liver Resection in Humans. Journal of investigative surgery, 29(1), pp. 20-31. Taylor & Francis 10.3109/08941939.2015.1047540

Zhang, Shengye; Dührkop-Sisewitsch, Claudia; Plock, Jan Alexander; Rieben, Robert (2015). Inhalation anesthesia of rats: influence of the fraction of inspired oxygen on limb ischemia/reperfusion injury. Laboratory animals, 50(3), pp. 185-197. Sage Publications 10.1177/0023677215604531

Prado, Monica; Eickel, Nina; De Niz Hidalgo, Mariana Isabel; Heitmann, Anna; Agop Nersesian, Carolina; Wacker, Rahel Corina; Schmuckli-Maurer, Jacqueline; Caldelari, Reto; Janse, Chris J; Khan, Shahid M; May, Jürgen; Meyer, Christian G; Heussler, Volker (2015). Long-term live imaging reveals cytosolic immune responses of host hepatocytes against Plasmodium infection and parasite escape mechanisms. Autophagy, 11(9), pp. 1561-1579. Landes Bioscience 10.1080/15548627.2015.1067361

Henke, Diana; Rupp, Sebastian; Gaschen, Véronique; Stoffel, Michael Hubert; Frey, Joachim; Vandevelde, Marc; Oevermann, Anna (2015). Listeria monocytogenes spreads within the brain by actin-based intra-axonal migration. Infection and immunity, 83(6), pp. 2409-2419. American Society for Microbiology 10.1128/IAI.00316-15

Gliemann, L; Buess, R; Nyberg, M; Hoppeler, Hans-Heinrich; Odriozola Quesada, Adolfo; Thaning, P; Hellsten, Y; Baum, Oliver; Mortensen, S P (2015). Capillary growth, ultrastructure remodelling and exercise training in skeletal muscle of essential hypertensive patients. Acta physiologica, 214(2), pp. 210-220. Blackwell Publishing 10.1111/apha.12501

Bongoni, Anjan; Kiermeir, David; Schnider, Jonas Thomas; Jenni, Hansjörg; Garimella, Pavan Sai; Bähr, Andrea; Klymiuk, Nikolai; Wolf, Eckhard; Ayares, David; Vögelin, Esther; Constantinescu, Mihai Adrian; Seebach, Jörg D; Rieben, Robert (2015). Transgenic Expression of Human CD46 on Porcine Endothelium: Effect on Coagulation and Fibrinolytic Cascades During Ex Vivo Human-to-Pig Limb Xenoperfusions. Transplantation, 99(10), pp. 2061-2069. Lippincott Williams & Wilkins 10.1097/TP.0000000000000746

Müller, Anne-Katrin; Brinkmann, Markus; Baumann, Lisa Annie; Stoffel, Michael Hubert; Segner, Helmut; Kidd, Karen A; Hollert, Henner (2015). Morphological alterations in the liver of yellow perch (Perca flavescens) from a biological mercury hotspot. Environmental science and pollution research, 22(22), pp. 17330-17342. Springer 10.1007/s11356-015-4177-4

Ahrens, H E; Petersen, B; Herrmann, D; Lucas-Hahn, A; Hassel, P; Ziegler, M; Kues, W A; Baulain, U; Baars, W; Schwinzer, R; Denner, J; Rataj, D; Werwitzke, S; Tiede, A; Bongoni, Anjan; Garimella, Sai Pavan; Despont, Alain; Rieben, Robert; Niemann, H (2015). siRNA mediated knockdown of tissue factor expression in pigs for xenotransplantation. American journal of transplantation, 15(5), pp. 1407-1414. Wiley-Blackwell 10.1111/ajt.13120

Bongoni, Anjan K; Kiermeir, David; Denoyelle, Julie Sophie Cécile; Jenni, Hansjörg; Burlak, Christopher; Seebach, Jörg D; Vögelin, Esther; Constantinescu, Mihai Adrian; Rieben, Robert (2015). Porcine extrahepatic vascular endothelial asialoglycoprotein receptor 1 mediates xenogeneic platelet phagocytosis in vitro and in human-to-pig ex vivo xenoperfusion. Transplantation, 99(4), pp. 693-701. Lippincott Williams & Wilkins 10.1097/TP.0000000000000553

Weibel, Ewald Rudolf (2015). On the tricks alveolar epithelial cells play to make a good lung. American journal of respiratory and critical care medicine, 191(5), pp. 504-513. American Lung Association 10.1164/rccm.201409-1663OE

Wyss, Fabia Simona; Schumacher, Vanessa; Gobeli, Stefanie; Hoby, Stefan; Arnaud, Antoine; Engels, Monika; Fries, Martin; Lange, Christian E.; Stoffel, Michael Hubert; Robert, Nadia (2015). Pododermatitis in Captive and Free-Ranging Greater Flamingos (Phoenicopterus roseus). Veterinary pathology, 52(6), pp. 1235-1242. American College of Veterinary Pathologists 10.1177/0300985814568359

Stucki, Andreas; Stucki, Janick Daniel; Hall, Sean; Felder, Marcel Christian; Mermoud, Yves; Schmid, Ralph; Geiser, Thomas; Guenat, Olivier Thierry (2015). A lung-on-chip array with an integrated bio-inspired respiration mechanism. Lab on a chip, 15(5), pp. 1302-1310. Royal Society of Chemistry 10.1039/C4LC01252F

Poláková, Eva; Illaste, Ardo; Niggli, Ernst; Sobie, Eric A. (2015). Maximal acceleration of calcium release refractoriness by β-adrenergic stimulation requires dual activation of protein kinase A and CaMKII in mouse ventricular myocytes. Journal of physiology, 593(6), pp. 495-507. Wiley-Blackwell 10.1113/jphysiol.2014.278051

Stanger, Olaf; Bleuel, Irina; Reineke, Sylvia; Banz Wälti, Yara; Erdös, Gabor; Tevaearai, Hendrik; Göber, Volkhard; Carrel, Thierry; Englberger, Lars (2015). Pitfalls and premature failure of the Freedom SOLO stentless valve. European journal of cardio-thoracic surgery, 48(4), pp. 562-570. Oxford University Press 10.1093/ejcts/ezu473

De Niz, Mariana; Helm, Susanne; Horstmann, Sebastian; Annoura, Takeshi; Del Portillo, Hernando A; Khan, Shahid M; Heussler, Volker (2015). In vivo and in vitro characterization of a Plasmodium liver stage-specific promoter. PLoS ONE, 10(4), e0123473. Public Library of Science 10.1371/journal.pone.0123473

Bürki, Sibylle; Gaschen, Véronique; Stoffel, Michael Hubert; Stojiljkovic, Ana; Frey, Joachim; Kühni-Boghenbor, Kathrin; Pilo, Paola (2015). Invasion and persistence of Mycoplasma bovis in embryonic calf turbinate cells. Veterinary research, 46(53), p. 53. Editions scientifiques Elsevier 10.1186/s13567-015-0194-z

Lorin, Charlotte; Vögeli, Isabelle; Niggli, Ernst (2015). Dystrophic cardiomyopathy: role of TRPV2 channels in stretch-induced cell damage. Cardiovascular research, 106(1), pp. 153-162. Oxford University Press 10.1093/cvr/cvv021

Niggli, Ernst (2015). IP 3 and Ca 2+ signals in the heart: boost them or bust them? Journal of physiology, 593(6), pp. 1385-1386. Wiley-Blackwell 10.1113/jphysiol.2014.287987

Choy, John; Albers, Christoph; Siebenrock, Klaus-Arno; Dolder, Silvia; Hofstetter, Wilhelm; Klenke, Frank M. (2014). Incorporation of RANKL promotes osteoclast formation and osteoclast activity on β-TCP ceramics. Bone, 69, pp. 80-88. Elsevier 10.1016/j.bone.2014.09.013

Waber-Wenger, Barbara; Forterre, Franck; Kuehni-Boghenbor, Kathrin; Danuser, Renzo; Stein, Jens Volker; Stoffel, Michael Hubert (2014). Sensory innervation of the dorsal longitudinal ligament and the meninges in the lumbar spine of the dog. Histochemistry and cell biology, 142(4), pp. 433-447. Springer 10.1007/s00418-014-1218-x

Felder, Marcel; Stucki, Andreas; Stucki, Janick; Geiser, Thomas; Guenat, Olivier Thierry (2014). The potential of microfluidic lung epithelial wounding: towards in vivo-like alveolar microinjuries. Integrative biology : quantitative biosciences from nano to macro, 6(12), pp. 1132-1140. Royal Society of Chemistry 10.1039/c4ib00149d

Tahedl, Daniel; Wirkes, André; Tschanz, Stefan A.; Ochs, Matthias; Mühlfeld, Christian (2014). How common is the lipid body-containing interstitial cell in the mammalian lung? American journal of physiology - lung cellular and molecular physiology, 307(5), L386-L394. American Physiological Society 10.1152/ajplung.00131.2014

Gajanayake, Thusitha; Olariu, Radu; Leclère, Franck-Marie Patrick; Dhayani, Ashish; Yang, Zijiang; Bongoni, Anjan; Banz Wälti, Yara; Constantinescu, Mihai Adrian; Karp, Jeffrey M.; Vemula, Praveen Kumar; Rieben, Robert; Vögelin, Esther (2014). A single localized dose of enzyme-responsive hydrogel improves long-term survival of a vascularized composite allograft. Science translational medicine, 6(249), 249ra110. American Association for the Advancement of Science 10.1126/scitranslmed.3008778

Koch, Franziska; Möller, Anja-Maria; Frenz, Martin; Pieles, Uwe; Kühni, Kathrin; Mevissen, Meike (2014). An in vitro toxicity evaluation of gold-, PLLA- and PCL-coated silica nanoparticles in neuronal cells for nanoparticle-assisted laser-tissue soldering. Toxicology in vitro, 28(5), pp. 990-998. Elsevier 10.1016/j.tiv.2014.04.010

Tschanz, Stefan A.; Salm, Lilian; Roth-Kleiner, Matthias; Barré, Sébastien; Burri, Peter Hermann; Schittny, Johannes (2014). Rat lungs show a biphasic formation of new alveoli during postnatal development. Journal of applied physiology, 117(1), pp. 89-95. American Physiological Society 10.1152/japplphysiol.01355.2013

Bongoni, Anjan K.; Kiermeir, David; Jenni, Hansjörg; Bähr, Andrea; Ayares, David; Klymiuk, Nikolai; Wolf, Eckhard; Vögelin, Esther; Constantinescu, Mihai A.; Seebach, Jörg D.; Rieben, Robert (2014). Complement dependent early immunological responses during ex vivo xenoperfusion of hCD46/HLA-E double transgenic pig forelimbs with human blood. Xenotransplantation, 21(3), pp. 230-243. Wiley 10.1111/xen.12090

Dührkop-Sisewitsch, Claudia; Rieben, Robert (2014). Refinement of tourniquet-induced peripheral ischemia/reperfusion injury in rats: comparison of 2 h vs 24 h reperfusion. Laboratory animals, 48(2), pp. 143-154. Sage Publications 10.1177/0023677213516313

Dührkop-Sisewitsch, Claudia; Rieben, Robert (2014). Ischemia/reperfusion injury: effect of simultaneous inhibition of plasma cascade systems versus specific complement inhibition. Biochemical pharmacology, 88(1), pp. 12-22. Elsevier 10.1016/j.bcp.2013.12.013

Dührkop-Sisewitsch, Claudia; Denoyelle, Julie Sophie Cécile; Shaw, Sidney; Rieben, Robert (2014). Use of dextran sulfate in tourniquet-induced skeletal muscle reperfusion injury. The journal of surgical research, 187(1), pp. 150-161. Elsevier 10.1016/j.jss.2013.10.012

Wuensch, Annegret; Baehr, Andrea; Bongoni, Anjan; Kemter, Elisabeth; Blutke, Andreas; Baars, Wiebke; Haertle, Sonja; Zakhartchenko, Valeri; Kurome, Mayuko; Kessler, Barbara; Faber, Claudius; Abicht, Jan-Michael; Reichart, Bruno; Wanke, Ruediger; Schwinzer, Reinhard; Nagashima, Hiroshi; Rieben, Robert; Ayares, David; Wolf, Eckhard and Klymiuk, Nikolai (2014). Regulatory sequences of the porcine THBD gene facilitate endothelial-specific expression of bioactive human thrombomodulin in single- and multitransgenic pigs. Transplantation, 97(2), pp. 138-147. Lippincott Williams & Wilkins 10.1097/TP.0b013e3182a95cbc

Psalla, Dimitra; Rüfenacht, Silvia; Stoffel, Michael Hubert; Chiers, Koen; Gaschen, Véronique; Doherr, Marcus G.; Gerber, Vinzenz; Welle, Monika M. (2013). Equine pastern vasculitis: a clinical and histopathological study. Veterinary journal, 198(2), pp. 524-530. Elsevier 10.1016/j.tvjl.2013.09.001

Mouton, Wolfgang G; Habegger, Anna K; Haenni, Beat; Tschanz, Stefan A.; Baumgartner, Iris; Ochs, Matthias (2013). Valve disease in chronic venous disorders: a quantitative ultrastructural analysis by transmission electron microscopy and stereology. Swiss medical weekly, 143(w13755), w13755. Muttenz: EMH Schweizerischer Ärzteverlag 10.4414/smw.2013.13755

Gobeli, Stefanie; Thomann, Andreas; Wyss, Fabia Simona; Kuehni-Boghenbor, Kathrin; Brodard, Isabelle; Perreten, Vincent (2013). Arsenicicoccus dermatophilus sp. nov., a hypha-forming bacterium isolated from the skin of greater flamingos (Phoenicopterus roseus) with pododermatitis. International journal of systematic and evolutionary microbiology, 63(Pt 11), pp. 4046-4051. Society for General Microbiology SGM 10.1099/ijs.0.048546-0

Gutierrez Pineda, Daniel A.; Fernandez Tenorio, Miguel; Ogrodnik, Jakob; Niggli, Ernst (2013). NO-dependent CaMKII activation during -adrenergic stimulation of cardiac muscle. Cardiovascular research, 100(3), pp. 392-401. Oxford University Press 10.1093/cvr/cvt201

Shirokova, Natalia; Niggli, Ernst (2013). Cardiac phenotype of Duchenne Muscular Dystrophy: Insights from cellular studies. Journal of molecular and cellular cardiology, 58, pp. 217-224. Elsevier 10.1016/j.yjmcc.2012.12.009

Niggli, Ernst; Ullrich, Nina D.; Gutierrez Pineda, Daniel A.; Kyrychenko, Sergii; Poláková, Eva; Shirokova, Natalia (2013). Posttranslational modifications of cardiac ryanodine receptors: Ca2+ signaling and EC-coupling. Biochimica et biophysica acta - molecular cell research, 1833(4), pp. 866-875. Elsevier 10.1016/j.bbamcr.2012.08.016

Kyrychenko, S.; Polakova, E.; Kang, C.; Pocsai, K.; Ullrich, Nina D.; Niggli, Ernst; Shirokova, N. (2013). Hierarchical accumulation of RyR post-translational modifications drives disease progression in dystrophic cardiomyopathy. Cardiovascular research, 97(4), pp. 666-675. Oxford University Press 10.1093/cvr/cvs425

Schätz, Georg; Schneiter, Martin; Ricka, Jaroslav; Kuehni-Boghenbor, Kathrin; Tschanz, Stefan A.; Doherr, Marcus G.; Frenz, Martin; Stoffel, Michael Hubert (2013). Ciliary Beating Plane and Wave Propagation in the Bovine Oviduct. Cells tissues organs, 198(6), pp. 457-469. Karger 10.1159/000360155

Charles, Roch-Philippe; Silva, Jilian; Iezza, Gioia; Phillips, Wayne A; McMahon, Martin (2013). BRAF V600E and PIK3CA H1074R cooperate to promote progression of anaplastic thyroid carcinoma in the mouse. Endocrine abstracts, 32(S16.1) BioScientifica 10.1530/endoabs.32.s16.1

Riche, Fabienne; Schneebeli, Martin; Tschanz, Stefan A. (2012). Design-based stereology to quantify structural properties of artificial and natural snow using thin sections. Cold regions science and technology, 2012(79-80), pp. 67-74. Amsterdam: Elsevier 10.1016/j.coldregions.2012.03.008

Lélu, Karine; Laffont, Sophie; Delpy, Laurent; Paulet, Pierre-Emmanuel; Périnat, Therese; Tschanz, Stefan A.; Pelletier, Lucette; Engelhardt, Britta; Guéry, Jean-Charles (2011). Estrogen Receptor α Signaling in T Lymphocytes Is Required for Estradiol-Mediated Inhibition of Th1 and Th17 Cell Differentiation and Protection against Experimental Autoimmune Encephalomyelitis. Journal of immunology, 187(5), pp. 2386-93. Bethesda, Md.: American Association of Immunologists 10.4049/jimmunol.1101578

Baum, Oliver; Suter, Florian; Gerber, Bernhard; Tschanz, Stefan A.; Buergy, Regula; Blank, Fabian; Hlushchuk, Ruslan; Djonov, Valentin (2010). VEGF-A promotes intussusceptive angiogenesis in the developing chicken chorioallantoic membrane. Microcirculation, 17(6), pp. 447-57. Malden, Mass.: Wiley-Blackwell 10.1111/j.1549-8719.2010.00043.x

Book Section

Gomez-Lazaro, Maria; Haberthür, David; Hlushchuk, Ruslan (2021). Computed tomography. In: Walter, Andreas; Mannheim, Julia G.; Caruana, Carmel J. (eds.) Imaging Modalities for Biological and Preclinical Research: A Compendium, Volume 2 (II.9-1). IOP Publishing 10.1088/978-0-7503-3747-2ch13

Gultom, Mitra; Laloli, Laura; Dijkman, Ronald (2020). Well-Differentiated Primary Mammalian Airway Epithelial Cell Cultures. In: Maier, Helena J.; Bickerton, Erica (eds.) Coronaviruses. Methods and Protocols. Methods in Molecular Biology: Vol. 2203 (pp. 119-134). Humana, New York, NY 10.1007/978-1-0716-0900-2_10

Niggli, Ernst; Fernandez Tenorio, Miguel (2019). Simultaneous Recording of Subcellular Ca2+ Signals from the Cytosol and Sarco/Endoplasmic Reticulum: Compartmentalized Dye Loading, Imaging, and Analysis. In: Heizmann, Claus W. (ed.) Calcium-Binding Proteins of the EF-Hand Superfamily. Methods in Molecular Biology: Vol. 1929 (pp. 53-71). New York, NY: Humana Press 10.1007/978-1-4939-9030-6_5

Niggli, Ernst; Shirokova, Natalia (2018). Caged Compounds: Applications in Cardiac Muscle Research. In: Kaestner, Lars; Lipp, Peter (eds.) Microscopy of the heart (pp. 75-95). Springer 10.1007/978-3-319-95304-5_4

Iacovache, Mircea Ioan; Dal Peraro, Matteo; Gisou van der Goot, F. (2015). Aerolysin and Related Aeromonas Toxins. In: Alouf, Joseph E.; Ladant, Daniel; Popoff, Michel R. (eds.) The Comprehensive Sourcebook of Bacterial Protein Toxins (pp. 773-793). Amsterdam: Elsevier 10.1016/b978-0-12-800188-2.00026-4

Conference or Workshop Item

Milella, Marco; Vera Rodríguez, Juan Carlos; Martínez Fernández, M. José; Bretones García, M. Dolores; Jiménez Brobeil, Sylvia A.; Brünig, Julia; López Flores, Inmaculada; Cámara Serrano, Juan Antonio; Martínez Sánchez, Rafael M.; Laffranchi, Zita (13 October 2023). As above, so below: deposition, modification, and reutilization of human remains at Marmoles cave (Cueva de los Marmoles: Southern Spain, 4000–1000 cal BCE) (Unpublished). In: What the dead tell us – Exploring societal behaviors of early European farmers through funerary practices (5000–4000 BCE). 13.10.2023.

Thiede, J.; Iacovache, Ioan; Rothenbühler, S.; Langenegger, S. M.; Zuber, Benoît; Häner, R. (24 August 2023). Supramolecular Assembly of Pyrene-DNA Conjugates into Columnar Vesicles (Unpublished). In: Swiss Chemical Society Fall Meeting 2023. Univeristy of Bern. 24-25.12.2023.

Hayrapetyan, Liana; Roth, Selina Moara; Hovhannisyan, Lusine; Aebersold, Daniel Matthias; Zimmer, Yitzhak; Medova, Michaela (17 January 2023). p53-dependent treatment response to DNA-PK inhibition in combination with irradiation in head and neck squamous cell carcinoma models. Strahlentherapie und Onkologie, p. 211. Springer

Corluka, Slavko; Croft, Andreas Shaun; Garnier, Manuel; Wangler, Sebastian; Moser, Helen Laura; Künzler, Michael; Gantenbein, Benjamin; Schär, Michael (2023). Development of a novel bioreactor for the mechanbiological study of the tendon-bone interface. In: Annual Meeting of the Swiss Society of Biomedical Engineering. 13 September.

Guerrero, Julien; Oberli, Andrea; Ille, Fabian; Eberle, Patric; Desprat, Romain; Bensadoun, Paul; Milhavet, Olivier; Camus, Anne; Lemaitre, Jean Marc; Guicheux, Jérôme; Tryfonidou, Marianna; Gantenbein, Benjamin (2023). Bulk RNA next generation sequencing of native donor-matched Human Tie2+ Progenitors versus Tie2- Cells (Unpublished). In: Tissue Engineering and Regenerative Medicine International Society (TERMIS) European Chapter Meeting. Manchester, UK. 28-31 March.

Hayrapetyan, Liana; Bouteiller, Sofiane; Quintin, Aurélie; Riedo, Rahel; Degen, Peter Methys; Aebersold, Daniel Matthias; Medo, Matúš; Adamantidis, Antoine Roger; Levitt, Pat; Zimmer, Yitzhak; Medova, Michaela (2023). Mice Lacking a Novel Phosphosite on MET Display ASD-Associated Behavior Pattern (Unpublished). In: Annual meeting of the Swiss Society for Neuroscience. Lugano, Switzerland. 09. – 10.06.2023.

Hayrapetyan, Liana; Degen, Peter Methys; Bouteiller, Sofiane; Riedo, Rahel; Quintin, Aurélie; Aebersold, Daniel Matthias; Medo, Matúš; Adamantidis, Antoine Roger; levitt, pat; Zimmer, Yitzhak; Medova, Michaela (2023). Sex- and strain-dependent dominant behavior in mice lacking the novel S1014 phosphosite on the ASD risk gene MET. (Unpublished). In: Clinical Neuroscience Bern. Bern, Switzerland. 08.09.2023.

Gantenbein, Benjamin; Oswald, Katharina A. C.; Bigdon, Sebastian F.; Erbach, Georg F.; Croft, Andreas S.; Bermudez-Lekerika, Paola; Strunz, Franziska; Rutsch, Niklas; Albers, Christoph E. (2023). The Bone Morphogenetic Protein L51P Enhances Spinal Fusion in Combination with BMP2 - An In Vivo Rat Spinal Fusion Model of the Elderly. In: 31st Annual Meeting of the European Orthopaedic Research Society. 27-29 September.

Zeinali, S.; Rechberger, K. F.; Dubey, C.; Gashi, R.; Marti, T.; Dorn, P.; Guenat, O. T. (April 2022). Metastasis-on-chip: 3D human microvasculature network to study extravasation dynamics of lung cancer in vitro. Annals of oncology, 33(S2), S92-S92. Elsevier 10.1016/j.annonc.2022.02.159

Crump, K.B.; Alminawi, A.; Bermudez-Lekerika, Paola; Croft, A. S.; Geris, L.; Noailly, J.; Gantenbein, B. (2022). Effects of Dynamic Compression on Cartilage Endplate Cells in Agarose. In: eCM20: Cartilage and Disc Repair and Regeneration. Davos, Switzerland. 15-18 June.

Bermudez-Lekerika, P; Croft, AS; Crump, KB; Wuertz-Kosak, K; Le Maitre, CL; Gantenbein, B (2022). Catabolic Phenotype Induction of NP and AF Cells in 3D Culture. In: eCM20: Cartilage and Disc Repair and Regeneration. Davos, Switzerland. 15-18 June.

Croft, AS; Corluka, Slavko; Silva-Correia, J; Oliveira, JM; Crump, KB; Reis, RL; Gantenbein, B (2022). Using methacrylated gellan gum in combination with novel silk to repair the annulus fibrosus in a dynamically loaded bovine organ culture model. In: eCM20: Cartilage and Disc Repair and Regeneration. Davos, Switzerland. 15-18 June 2022.

Ruprecht, Nico; Hungerbuehler, Martin; Kellmann, Philipp; Harder, Nathalie; Schmidt, Günter; Wotzkow Alvarez, Carlos; Haenni, Beat; Blank, Fabian; von Tengg-Kobligk, Hendrik; Granzow, Christof (2017). Abstract 1889: Formation and merger of H69 and H69AR small cell lung cancer (SCLC) tumor cell clusters (TCCs) in vitro. Cancer research, 77(Suppl 13), p. 1889. American Association for Cancer Research AACR 10.1158/1538-7445.AM2017-1889

Working Paper

Feller, C.; Pommerol, Antoine; Lethuillier, A.; Hänni, Nora Phillys; Schürch, S.; Bühr, Claudia; Gundlach, B.; Haenni, Beat; Jäggi, Noah Victor; Kaminek, Marek; Team, the CoPhyLab (13 December 2023). Spectro-photometric properties of CoPhyLab's dust mixtures (arXiv). Cornell University 10.48550/arxiv.2312.08311

Zamprogno, Pauline; Wüthrich, Simon; Achenbach, Sven; Stucki, Janick D.; Hobi, Nina; Schneider-Daum, Nicole; Lehr, Claus-Michael; Huwer, Hanno; Geiser, Thomas; Schmid, Ralph A.; Guenat, Olivier T. (2019). Second-generation lung-on-a-chip array with a stretchable biological membrane (bioRxiv). Cold Spring Harbor Laboratory 10.1101/608919

V'kovski, Philip; Gerber, M; Kelly, Jenna Nicole; Pfänder, Stephanie; Ebert, Nadine; Braga, Sophie Marie-Pierre; Simillion, Cedric André Marie; Portmann, Jasmine; Stalder, Hanspeter; Gaschen, Véronique; Bruggmann, Rémy; Stoffel, Michael Hubert; Heller, Manfred; Dijkman, Ronald; Thiel, Volker Earl (14 September 2018). Determination of host cell proteins constituting the molecular microenvironment of coronavirus replicase complexes by proximity-labeling (bioRxiv). Cold Spring Harbor Laboratory 10.1101/417907

Thesis

(2016). Protein-carbohydrate interactions in the human immune system (Submitted). (Dissertation, Graduate School for Cellular and Biomedical Sciences, University of Bern, Faculty of Medicine)

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