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Wilbs, Jonas; Kong, Xu-Dong; Middendorp, Simon J; Prince, Raja; Cooke, Alida; Demarest, Caitlin T; Abd El Hafez, Mai Moustafa Ahmed; Roberts, Kalliope; Umei, Nao; Gonschorek, Patrick; Lamers, Christina; Deyle, Kaycie; Rieben, Robert; Cook, Keith E; Angelillo, Anne; Heinis, Christian (2020). Cyclic peptide FXII inhibitor provides safe anticoagulation in a thrombosis model and in artificial lungs. Nature communications, 11(1), p. 3890. Nature Publishing Group 10.1038/s41467-020-17648-w
Jandus, Peter; Frias Boligan, Kayluz; Smith, David F; de Graauw, Elisabeth; Grimbacher, Bodo; Jandus, Camilla; Abd El Hafez, Mai Moustafa Ahmed; Despont, Alain; Bovin, Nicolai; Simon, Dagmar; Rieben, Robert; Simon, Hans-Uwe; Cummings, Richard D; von Gunten, Stephan (2019). The architecture of the IgG anti-carbohydrate repertoire in primary antibody deficiencies (PADs). Blood, 134(22), pp. 1941-1950. American Society of Hematology 10.1182/blood.2019001705
Abd El Hafez, Mai Moustafa Ahmed; Shaw-Boden, Jane; Wilbs, Jonas; Despont, Alain; Rieben, Robert (2018). Improvement of a Closed Chest Porcine Myocardial Infarction Model by Standardization of Tissue and Blood Sampling Procedures. Journal of visualized experiments(133) MYJoVE Corporation 10.3791/56856
Mancini, Stefano; Kumar, Ranjeet; Abicht, Helge; Fischermeier, Elisabeth; Solioz, Marc (2016). Copper resistance and its regulation in the sulfate reducing bacterium Desulfosporosinus sp. OT. Microbiology, 162(4), pp. 684-693. Society for General Microbiology 10.1099/mic.0.000256
Wang, Zizun; Vermij, Sarah H.; Sottas, Valentin; Shestak, Anna; Ross-Kaschitza, Daniela; Zaklyazminskaya, Elena V; Hudmon, Andy; Pitt, Geoffrey S; Rougier, Jean-Sébastien; Abriel, Hugues (2020). Calmodulin binds to the N-terminal domain of the cardiac sodium channel Nav1.5. Channels, 14(1), pp. 268-286. Taylor & Francis 10.1080/19336950.2020.1805999
Chevalier, Morgan Yoann Edwin; Vermij, Sarah Helena; Wyler, Kurt; Gillet, Ludovic; Keller, Irene; Abriel, Hugues (2018). Corrigendum: Transcriptomic analyses of murine ventricular cardiomyocytes. Scientific data, 5(180216), p. 180216. Nature Publishing Group 10.1038/sdata.2018.216
Hinard, Valérie; Britan, Aurore; Schaeffer, Mathieu; Zahn-Zabal, Monique; Thomet, Urs; Rougier, Jean-Sébastien; Bairoch, Amos; Abriel, Hugues; Gaudet, Pascale (2017). Annotation of functional impact of voltage-gated sodium channel mutations. Human mutation, 38(5), pp. 485-493. Wiley-Blackwell 10.1002/humu.23191
Vermij, Sarah Helena; Abriel, Hugues; van Veen, Toon A B (2017). Refining the molecular organization of the cardiac intercalated disc. Cardiovascular research, 113(3), pp. 259-275. Oxford University Press 10.1093/cvr/cvw259
Syam, Ninda Ratna Maharani; Chatel, Stéphanie; Ozhathil, Lijo Cherian; Sottas, Valentin; Rougier, Jean-Sébastien; Baruteau, Alban; Baron, Estelle; Amarouch, Mohamed Yassine; Daumy, Xavier; Probst, Vincent; Schott, Jean-Jacques; Abriel, Hugues (2016). Variants of Transient Receptor Potential Melastatin Member 4 in Childhood Atrioventricular Block. Journal of the American Heart Association, 5(5) American Heart Association 10.1161/JAHA.114.001625
Daumy, Xavier; Amarouch, Mohamed Yassine; Lindenbaum, Pierre; Bonnaud, Stéphanie; Charpentier, Eric; Bianchi, Beatrice; Nafzger, Sabine Naomi; Baron, Estelle; Fouchard, Swanny; Thollet, Aurélie; Kyndt, Florence; Barc, Julien; Le Scouarnec, Solena; Makita, Naomasa; Le Marec, Hervé; Dina, Christian; Gourraud, Jean-Baptiste; Probst, Vincent; Abriel, Hugues; Redon, Richard; ... (2016). Targeted resequencing identifies TRPM4 as a major gene predisposing to progressive familial heart block type I. International journal of cardiology, 207, pp. 349-358. Elsevier 10.1016/j.ijcard.2016.01.052
Gillet, L.; Shy, D.; Abriel, H. (2014). Elucidating sodium channel NaV1.5 clustering in cardiac myocytes using super-resolution techniques. Cardiovascular research, 104(2), pp. 231-233. Oxford University Press 10.1093/cvr/cvu221
Andersen, Martin Nybo; Krzystanek, Katarzyna; Petersen, Frederic; Bomholtz, Sofia Hammami; Olesen, Søren-Peter; Abriel, Hugues; Jespersen, Thomas; Rasmussen, Hanne Borger (2013). A phosphoinositide 3-kinase (PI3K)-serum- and glucocorticoid-inducible kinase 1 (SGK1) pathway promotes Kv7.1 channel surface expression by inhibiting Nedd4-2 protein. Journal of biological chemistry, 288(52), pp. 36841-54. American Society for Biochemistry and Molecular Biology 10.1074/jbc.M113.525931
Abriel, Hugues; De Lange, Enno Karel; Kucera, Jan; Loussouarn, Gildas; Tarek, Mounir (2013). Computational tools to investigate genetic cardiac channelopathies. Frontiers in physiology, 4, p. 390. Frontiers Research Foundation 10.3389/fphys.2013.00390
Abriel, Hugues; Rougier, Jean-Sébastien (2013). β-Blockers in Congenital Short-QT Syndrome as Ion Channel Blockers. Journal of cardiovascular electrophysiology, 24(10), pp. 1172-1174. Wiley-Blackwell 10.1111/jce.12204
Sottas, Valentin; Rougier, Jean-Sébastien; Jousset, Florian; Kucera, Jan P.; Shestak, Anna; Makarov, Leonid M.; Zaklyazminskaya, Elena V.; Abriel, Hugues (2013). Characterization of 2 genetic variants of Na(v) 1.5-arginine 689 found in patients with cardiac arrhythmias. Journal of cardiovascular electrophysiology, 24(9), pp. 1037-1046. Wiley-Blackwell 10.1111/jce.12173
Pérez López, Irene; Cariolato, Luca; Maric, Darko; Gillet, Ludovic; Abriel, Hugues; Diviani, Dario (2013). A-kinase anchoring protein Lbc coordinates a p38 activating signaling complex controlling compensatory cardiac hypertrophy. Molecular and cellular biology, 33(15), pp. 2903-2917. American Society for Microbiology 10.1128/MCB.00031-13
Singhanat, Suradech; Ruepp, Marc-David; Jack, Thomas; Rougier, Jean-Sébastien; Abriel, Hugues; Mühlemann, Oliver; Lochner, Martin (August 2013). Towards the site-specific modification of the hERG K+ channel. CHIMIA, 67(7/8), p. 532. Schweizerische Chemische Gesellschaft
Gillet, Ludovic; Shy, Diana Amy; Abriel, Hugues (2013). NaV1.5 and interacting proteins in human arrhythmogenic cardiomyopathy. Future cardiology, 9(4), pp. 467-470. Future Medicine Ltd 10.2217/fca.13.38
Laedermann, Cédric; Cachemaille, Matthieu; Kirschmann, Guylène; Pertin, Marie; Gosselin, Romain-Daniel; Chang, Isabelle; Albesa, Maxime; Towne, Chris; Schneider, Bernard L.; Kellenberger, Stephan; Abriel, Hugues; Decosterd, Isabelle (2013). Dysregulation of voltage-gated sodium channels by ubiquitin ligase NEDD4-2 in neuropathic pain. Journal of clinical investigation, 123(7), pp. 3002-3013. American Society for Clinical Investigation 10.1172/JCI68996
Pouly, Daniel; Debonneville, Anne; Ruffieux-Daidié, Dorothée; Maillard, Marc; Abriel, Hugues; Loffing, Johannes; Staub, Olivier (2013). Mice carrying ubiquitin-specific protease 2 (Usp2) gene inactivation maintain normal sodium balance and blood pressure. American journal of physiology - renal physiology, 305(1), F21-30. American Physiological Society 10.1152/ajprenal.00012.2013
Amarouch, Mohamed Yassine; Syam, Ninda Ratna Maharani; Abriel, Hugues (2013). Biochemical, single-channel, whole-cell patch clamp, and pharmacological analyses of endogenous TRPM4 channels in HEK293 cells. Neuroscience letters, 541, pp. 105-110. Elsevier 10.1016/j.neulet.2013.02.011
Rougier, Jean-Sébastien; Gavillet, Bruno; Abriel, Hugues (2013). Proteasome inhibitor (MG132) rescues Nav1.5 protein content and the cardiac sodium current in dystrophin-deficient mdx (5cv) mice. Frontiers in physiology, 4, p. 51. Frontiers Research Foundation 10.3389/fphys.2013.00051
Reinhard, Katja; Rougier, Jean-Sébastien; Ogrodnik, Jakob; Abriel, Hugues (2013). Electrophysiological properties of mouse and epitope-tagged human cardiac sodium channel Na v1.5 expressed in HEK293 cells. F1000Research, 2(48), p. 48. F1000 Research Ltd 10.12688/f1000research.2-48.v2
Liu, Hui; Chatel, Stéphanie; Simard, Christophe; Syam, Ninda; Salle, Laurent; Probst, Vincent; Morel, Julie; Millat, Gilles; Lopez, Michel; Abriel, Hugues; Schott, Jean-Jacques; Guinamard, Romain; Bouvagnet, Patrice (2013). Molecular genetics and functional anomalies in a series of 248 Brugada cases with 11 mutations in the TRPM4 channel. PLoS ONE, 8(1), e54131. Public Library of Science 10.1371/journal.pone.0054131
Petitprez, S; Jespersen, T; Pruvot, E; Keller, D I; Corbaz, C; Schläpfer, J; Abriel, H; Kucera, J P (2008). Analysis of a novel SCN5A mutation (C1850S): conduction vs. repolarization disorder hypotheses in the Brugada syndrome. Cardiovascular research, 78(3), pp. 494-504. Oxford: Oxford University Press 10.1093/cvr/cvn023
Rougier, Jean-Sébastien; Muller, Olivier; Berger, Stefan; Centeno, Gabriel; Schütz, Günther; Firsov, Dmitri; Abriel, Hugues (2008). Mineralocorticoid receptor is essential for corticosteroid-induced up-regulation of L-type calcium currents in cultured neonatal cardiomyocytes. Pflügers Archiv : European journal of physiology, 456(2), pp. 407-12. Berlin: Springer 10.1007/s00424-007-0387-z
Durrer, Isabelle; Ackermann, Daniel; Klossner, Rahel; Grössl, Michael; Vögel, Clarissa; du Toit, Therina; Vogt, Bruno; Jamin, Heidi; Mohaupt, Markus; Gennari-Moser, Carine (2024). No extra-adrenal aldosterone production in various human cell lines. Journal of molecular endocrinology, 72(3) Journal of Endocrinology 10.1530/JME-23-0100
Höfemann, Maike Svenja; Adalid López, Víctor Javier; Kreis, Roland (2019). Optimizing acquisition and fitting conditions for 1 H MR spectroscopy investigations in global brain pathology. NMR in biomedicine, 32(11), e4161. Wiley Interscience 10.1002/nbm.4161
Döring, André; Adalid López, Víctor Javier; Boesch, Christoph Hans; Kreis, Roland (2018). Diffusion-weighted magnetic resonance spectroscopy boosted by simultaneously acquired water reference signals. Magnetic resonance in medicine, 80(6), pp. 2326-2338. Wiley-Liss 10.1002/mrm.27222
Adalid López, Víctor Javier; Döring, André; Kyathanahally, Sreenath Pruthviraj; Bolliger, Christine Sandra; Boesch, Christoph Hans; Kreis, Roland (2017). Fitting interrelated datasets: metabolite diffusion and general lineshapes. Magma, 30(5), pp. 429-448. Springer 10.1007/s10334-017-0618-z
Hayrapetyan, Liana; Bouteiller, Sofiane; Quintin, Aurélie; Riedo, Rahel; Degen, Peter; Aebersold, Daniel; Medo, Matúš; Adamantidis, Antoine; Levitt, Pat; Zimmer, Yitzhak; Medova, Michaela (2023). MICE LACKING A NOVEL PHOSPHOSITE S1014 ON THE MET RECEPTOR TYROSINE KINASE DISPLAY ASD-ASSOCIATED BEHAVIORAL PATTERN. IBRO neuroscience reports, 15(S1), S99-S99. Elsevier 10.1016/j.ibneur.2023.08.079
Hayrapetyan, Liana; Bouteiller, Sofiane; Quintin, Aurélie; Riedo, Rahel; Degen, Peter Methys; Aebersold, Daniel Matthias; Medo, Matúš; Adamantidis, Antoine Roger; Levitt, Pat; Zimmer, Yitzhak; Medova, Michaela (2023). Mice Lacking a Novel Phosphosite on MET Display ASD-Associated Behavior Pattern (Unpublished). In: Annual meeting of the Swiss Society for Neuroscience. Lugano, Switzerland. 09. – 10.06.2023.
Hayrapetyan, Liana; Degen, Peter Methys; Bouteiller, Sofiane; Riedo, Rahel; Quintin, Aurélie; Aebersold, Daniel Matthias; Medo, Matúš; Adamantidis, Antoine Roger; levitt, pat; Zimmer, Yitzhak; Medova, Michaela (2023). Sex- and strain-dependent dominant behavior in mice lacking the novel S1014 phosphosite on the ASD risk gene MET. (Unpublished). In: Clinical Neuroscience Bern. Bern, Switzerland. 08.09.2023.
Janser, Félice A.; Adams, Olivia Joan; Bütler, Vanessa; Bill, Anna Magdalena; Dislich, Bastian; Seiler, Christian A.; Kröll, Dino; Langer, Rupert; Tschan, Mario (2018). Her2-Targeted Therapy Induces Autophagy in Esophageal Adenocarcinoma Cells. International journal of molecular sciences, 19(10) Molecular Diversity Preservation International MDPI 10.3390/ijms19103069
Grassi, Mara; Laubscher, Bernard; Pandey, Amit V; Tschumi, Sibylle; Graber, Franziska; Schaller, André; Janner, Marco; Aeberli, Daniel; Hewer, Ekkehard; Nuoffer, Jean-Marc; Gautschi, Matthias (2023). Expanding the p.(Arg85Trp) Variant-Specific Phenotype of HNF4A: Features of Glycogen Storage Disease, Liver Cirrhosis, Impaired Mitochondrial Function, and Glomerular Changes. Molecular syndromology, 14(4), pp. 347-361. Karger 10.1159/000529306
Uster, Stephanie Sarah; Matos Coelho, Fernanda; Aeberli, Daniel; Stein, Jens Volker; Hofstetter, Wilhelm; Engelhardt, Britta; Seitz, Michael (2018). TNFα blockade mediates bone protection in antigen-induced arthritis by reducing osteoclast precursor supply. Bone, 107, pp. 56-65. Elsevier 10.1016/j.bone.2017.10.020
Balani, Deepak; Aeberli, Daniel; Hofstetter, Willy; Seitz, Michael (2012). Interleukin-17A stimulates granulocyte-macrophage colony-stimulating factor release by murine osteoblasts in the presence of 1,25-dihydroxyvitamin D(3) and inhibits murine osteoclast development in vitro. Arthritis & rheumatism, 65(2), pp. 236-246. Hoboken, N.J.: Wiley-Blackwell 10.1002/art.37762
Hayrapetyan, Liana; Bouteiller, Sofiane; Quintin, Aurélie; Riedo, Rahel; Degen, Peter; Aebersold, Daniel; Medo, Matúš; Adamantidis, Antoine; Levitt, Pat; Zimmer, Yitzhak; Medova, Michaela (2023). MICE LACKING A NOVEL PHOSPHOSITE S1014 ON THE MET RECEPTOR TYROSINE KINASE DISPLAY ASD-ASSOCIATED BEHAVIORAL PATTERN. IBRO neuroscience reports, 15(S1), S99-S99. Elsevier 10.1016/j.ibneur.2023.08.079
Koch, Jonas P; Roth, Selina M; Quintin, Aurélie; Gavini, Jacopo; Orlando, Eleonora; Riedo, Rahel; Pozzato, Chiara; Hayrapetyan, Liana; Aebersold, Ruedi; Stroka, Deborah M; Aebersold, Daniel M; Medo, Matúš; Zimmer, Yitzhak; Medova, Michaela (2023). A DNA-PK phosphorylation site on MET regulates its signaling interface with the DNA damage response. Oncogene, 42(26), pp. 2113-2125. Nature Publishing Group 10.1038/s41388-023-02714-6
Hayrapetyan, Liana; Bouteiller, Sofiane; Quintin, Aurélie; Riedo, Rahel; Degen, Peter Methys; Aebersold, Daniel Matthias; Medo, Matúš; Adamantidis, Antoine Roger; Levitt, Pat; Zimmer, Yitzhak; Medova, Michaela (2023). Mice Lacking a Novel Phosphosite on MET Display ASD-Associated Behavior Pattern (Unpublished). In: Annual meeting of the Swiss Society for Neuroscience. Lugano, Switzerland. 09. – 10.06.2023.
Pozzato, Chiara; Koch, Jonas Paul; Riedo, Rahel; Hayrapetyan, Liana; Medo, Matúš; Aebersold, Daniel Matthias; Zimmer, Yitzhak; Medova, Michaela (2023). A newly discovered phosphorylation site of the MET receptor tyrosine kinase, Ser1016, in mediating tumour growth and cancer therapy resistance. (Unpublished). In: BCRC Retreat. Bern, Switzerland. 26.06.2023.
Hayrapetyan, Liana; Degen, Peter Methys; Bouteiller, Sofiane; Riedo, Rahel; Quintin, Aurélie; Aebersold, Daniel Matthias; Medo, Matúš; Adamantidis, Antoine Roger; levitt, pat; Zimmer, Yitzhak; Medova, Michaela (2023). Sex- and strain-dependent dominant behavior in mice lacking the novel S1014 phosphosite on the ASD risk gene MET. (Unpublished). In: Clinical Neuroscience Bern. Bern, Switzerland. 08.09.2023.
Schanne, Daniel H; Koch, Alexander; Elicin, Olgun; Giger, Roland; Medová, Michaela; Zimmer, Yitzhak; Aebersold, Daniel M (2022). Prognostic and Predictive Biomarkers in Head and Neck Squamous Cell Carcinoma Treated with Radiotherapy-A Systematic Review. Biomedicines, 10(12) MDPI 10.3390/biomedicines10123288
Melin, Nicolas; Yarahmadov, Tural; Sanchez-Taltavull, Daniel; Birrer, Fabienne E; Brodie, Tess M; Petit, Benoît; Felser, Andrea; Nuoffer, Jean-Marc; Montani, Matteo; Vozenin, Marie-Catherine; Herrmann, Evelyn; Candinas, Daniel; Aebersold, Daniel M; Stroka, Deborah (2022). A new mouse model of radiation-induced liver disease reveals mitochondrial dysfunction as an underlying fibrotic stimulus. JHEP reports, 4(7), p. 100508. Elsevier 10.1016/j.jhepr.2022.100508
Nisa, Lluís; Francica, Paola; Giger, Roland; Medo, Matúš; Eliçin, Olgun; Friese-Hamim, Manja; Wilm, Claudia; Stroh, Christopher; Bojaxhiu, Beat; Quintin, Aurélie; Caversaccio, Marco D.; Dettmer, Matthias S.; Buchwalder, Mélanie; Brodie, Tess M.; Aebersold, Daniel M.; Zimmer, Yitzhak; Carey, Thomas E.; Medova, Michaela (2020). Targeting the MET receptor tyrosine kinase as a strategy for radiosensitization in loco-regionally advanced head and neck squamous cell carcinoma. Molecular cancer therapeutics, 19(2), pp. 614-626. American Association for Cancer Research AACR 10.1158/1535-7163.MCT-18-1274
Melin, Nicolas; Sánchez Taltavull, Daniel; Petit, B.; Herman, E.; Zimmer, Yitzhak; Candinas, Daniel; Vozenin, M.C.; Aebersold, Daniel; Keogh-Stroka, Deborah M. (2018). SP-0330: Science slam: Report back from ESTRO mobility grants biology: Development of a radiation induced liver damage model. Radiotherapy and oncology, 127(Suppl. 1), S175-S176. Elsevier 10.1016/S0167-8140(18)30640-6
Nisa Hernández, Lluís; Häfliger, Pascal; Poliakova, Michaela; Giger, Roland; Francica, Paola; Aebersold, Daniel; Charles, Roch-Philippe; Zimmer, Yitzhak; Medova, Michaela (2017). PIK3CA hotspot mutations differentially impact responses to MET targeting in MET-driven and non-driven preclinical cancer models. Molecular cancer, 16(1), p. 93. BioMed Central 10.1186/s12943-017-0660-5
Malla, Bijaya; Zaugg, Kathrin; Vassella, Erik; Aebersold, Daniel; Dal Pra, Alan (2017). Exosomes and Exosomal MicroRNAs in Prostate Cancer Radiation Therapy. International journal of radiation oncology, biology, physics, 98(5), pp. 982-995. Elsevier 10.1016/j.ijrobp.2017.03.031
Zander, T; Aebi, Stefan; Pabst, T; Renner, C; Driessen, C (2017). Spotlight on pomalidomide: could less be more? Leukemia, 31(9), pp. 1987-1989. Nature Publishing Group 10.1038/leu.2017.156
Oberli, Andrea; Popovici, Vlad; Delorenzi, Mauro; Baltzer, Anna; Antonov, Janine; Matthey, Sybille; Aebi, Stefan; Altermatt, Hans Jörg; Jaggi, Rolf (2008). Expression profiling with RNA from formalin-fixed, paraffin-embeeded material. BMC Genomics, 1(1), p. 9. London: BioMed Central 10.1186/1755-8794-1-9
Kaiser, P C; Körner, M; Kappeler, A; Aebi, S (2005). Retinoid receptors in ovarian cancer: expression and prognosis. Annals of oncology, 16(9), pp. 1477-1487. Oxford University Press 10.1093/annonc/mdi265
Novak, Urban; Grob, T. J.; Baskaynak, G.; Peters, U. R.; Aebi, Stefan; Zwahlen, D.; Tschan, Mario; Kreuzer, K.-A.; Oppliger Leibundgut, Elisabeth; Cajot, J.-F.; Tobler, Andreas; Fey, Martin (2001). Overexpression of the p73 gene is a novel finding in high-risk B-cell chronic lymphocytic leukemia. Annals of oncology, 12(7), pp. 981-986. Oxford University Press 10.1023/A:1011153206003
Buetler, T. M.; Wilder-Smith, O. H. G.; Wilder-Smith, C. H.; Aebi, S.; Cerny, T.; Brenneisen, R. (2000). Analgesic action of i.v. morphine-6-glucuronide in healthy volunteers. British journal of anaesthesia, 84(1), pp. 97-99. Oxford University Press 10.1093/oxfordjournals.bja.a013391
Nasher, Fauzy Negiub Ali; Aguilar, Fernando; Aebi, Susanne; Hermans, Peter WM; Heller, Manfred; Hathaway, Lucy Jane (2018). Peptide Ligands of AmiA, AliA, and AliB Proteins Determine Pneumococcal Phenotype. Frontiers in Microbiology, 9(3013) Frontiers 10.3389/fmicb.2018.03013
Hathaway, Lucy J.; Bättig, Patrick; Reber, Sandra; Rotzetter, Jeannine Ursula; Aebi, Susanne; Hauser, Christoph; Heller, Manfred; Kadioglu, Aras; Mühlemann, Kathrin (2014). Streptococcus pneumoniae detects and responds to foreign bacterial peptide fragments in its environment. Open Biology, 4(130224), p. 130224. The Royal Society Publishing 10.1098/rsob.130224
van Dorland, Hendrika Anette; Mansouri Taleghani, Magnus; Sakai, Kazuya; Friedman, Kenneth D; George, James N; Hrachovinova, Ingrid; Knöbl, Paul N; von Krogh, Anne Sophie; Schneppenheim, Reinhard; Aebi-Huber, Isabella; Bütikofer, Lukas; Largiadèr, Carlo R.; Cermakova, Zuzana; Kokame, Koichi; Miyata, Toshiyuki; Yagi, Hideo; Terrell, Deirdra R; Vesely, Sara K; Matsumoto, Masanori; Lämmle, Bernhard; ... (2019). The International Hereditary Thrombotic Thrombocytopenic Purpura Registry: Key findings at enrolment until 2017. Haematologica - the hematology journal, 104(10), pp. 2107-2115. Ferrata-Storti Foundation 10.3324/haematol.2019.216796
Kang, Juening; La Manna, Federico; Bonollo, Francesco; Sampson, Natalie; Alberts, Ian L; Mingels, Clemens; Afshar Oromieh, Ali; Thalmann, George N; Karkampouna, Sofia (2022). Tumor microenvironment mechanisms and bone metastatic disease progression of prostate cancer. Cancer letters, 530, pp. 156-169. Elsevier 10.1016/j.canlet.2022.01.015
Imlimthan, Surachet; Menéndez, Elena; Escudero-Castellanos, Alondra; Moon, Euy Sung; Läppchen, Tilman; Rathke, Hendrik; Afshar-Oromieh, Ali; Roesch, Frank; Rominger, Axel; Gourni, Eleni (2022). Investigation of 68Ga/177Lu-labeled FAP-based inhibitor for diagnostic and therapeutic applications. Nuclear medicine and biology, 108-109, S56-S57. Elsevier 10.1016/S0969-8051(22)00147-0
Escudero-Castellanos, Alondra; Imlimthan, Surachet; Menéndez, Elena; Moon, Euy Sung; Läppchen, Tilman; Rathke, Hendrik; Afshar Oromieh, Ali; Roesch, Frank; Rominger, Axel; Gourni, Eleni (2022). Tumor stroma diagnostic imaging by a 68Ga-coupled small-molecule fibroblast activation protein (FAP) inhibitor: first pre-clinical data. Nuclear medicine and biology, 108-109, S186-S187. Elsevier 10.1016/S0969-8051(22)00388-2
Aghagolzadeh, Parisa; Radpour, Ramin; Bachtler, Matthias; van Goor, Harry; Smith, Edward R; Lister, Adam; Odermatt, Alex; Feelisch, Martin; Pasch, Andreas (2017). Hydrogen sulfide attenuates calcification of vascular smooth muscle cells via KEAP1/NRF2/NQO1 activation. Atherosclerosis, 265, pp. 78-86. Elsevier 10.1016/j.atherosclerosis.2017.08.012
Ajiboye, Jubilee; Uldry, Anne-Christine; Heller, Manfred; Naguleswaran, Arunasalam; Fan, Erkang; Van Voorhis, Wesley C; Hemphill, Andrew; Müller, Joachim (2024). Molecular Targets of the 5-Amido-Carboxamide Bumped Kinase Inhibitor BKI-1748 in Cryptosporidium parvum and HCT-8 Host Cells. International journal of molecular sciences, 25(5) MDPI 10.3390/ijms25052707
Hill, Virginia; Akarsu, Hatice; Sánchez Barbarroja, Rubén; Cippà, Valentina L.; Kuhnert, Peter; Heller, Martin; Falquet, Laurent; Heller, Manfred; Stoffel, Michael H.; Labroussaa, Fabien; Jores, Joerg (2021). Minimalistic mycoplasmas harbor different functional toxin-antitoxin systems. PLoS genetics, 17(10), e1009365. Public Library of Science 10.1371/journal.pgen.1009365
Akhoundova, Dilara; Francica, Paola; Rottenberg, Sven; Rubin, Mark A (2024). DNA Damage Response and Mismatch Repair Gene Defects in Advanced and Metastatic Prostate Cancer. Advances in anatomic pathology, 31(2), pp. 61-69. Lippincott Williams & Wilkins 10.1097/PAP.0000000000000422
Akhoundova, Dilara; Rubin, Mark Andrew (2024). The grand challenge of moving cancer whole-genome sequencing into the clinic. Nature medicine, 30(1), pp. 39-40. Nature Publishing Group 10.1038/s41591-023-02697-7
Akhoundova Sanoyan, Dilara; Seipel, Katja; Bacher, Ulrike; Kronig, Marie-Noelle; Porret, Naomi; Wiedemann, Gertrud; Daskalakis, Michael; Pabst, Thomas (2023). Real-life experiences with CAR T-cell therapy with idecabtagene vicleucel (ide-cel) for triple-class exposed relapsed/refractory multiple myeloma patients. BMC cancer, 23(1), p. 345. BioMed Central 10.1186/s12885-023-10824-3
Seipel, Katja; Frey, Michèle; Nilius, Henning; Akhoundova, Dilara; Banz, Yara; Bacher, Ulrike; Pabst, Thomas (2023). Low-Frequency PPM1D Gene Mutations Affect Treatment Response to CD19-Targeted CAR T-Cell Therapy in Large B-Cell Lymphoma. Current oncology, 30(12), pp. 10463-10476. MDPI 10.3390/curroncol30120762
Akhoundova, Dilara; Feng, Felix Y; Pritchard, Colin C; Rubin, Mark A (2022). Molecular Genetics of Prostate Cancer and Role of Genomic Testing. Surgical pathology clinics, 15(4), pp. 617-628. 10.1016/j.path.2022.08.002
Akhoundova, Dilara; Rubin, Mark A (2022). Clinical application of advanced multi-omics tumor profiling: Shaping precision oncology of the future. Cancer cell, 40(9), pp. 920-938. Cell Press 10.1016/j.ccell.2022.08.011
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Kang, Juening; La Manna, Federico; Bonollo, Francesco; Sampson, Natalie; Alberts, Ian L; Mingels, Clemens; Afshar Oromieh, Ali; Thalmann, George N; Karkampouna, Sofia (2022). Tumor microenvironment mechanisms and bone metastatic disease progression of prostate cancer. Cancer letters, 530, pp. 156-169. Elsevier 10.1016/j.canlet.2022.01.015
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Gavini, Jacopo; Dommann, Noëlle; Jakob, Manuel O.; Keogh, Adrian; Bouchez, Laure C; Karkampouna, Sofia; Kruithof-de Julio, Marianna; Medova, Michaela; Zimmer, Yitzhak; Schläfli, Anna M; Tschan, Mario P.; Candinas, Daniel; Stroka, Deborah; Banz, Vanessa (2019). Verteporfin-induced lysosomal compartment dysregulation potentiates the effect of sorafenib in hepatocellular carcinoma. Cell death & disease, 10(10), p. 749. Springer Nature 10.1038/s41419-019-1989-z
La Manna, F.; Staender, L.; Gray, P. C.; Zoni, E.; Karkampouna, S.; Thalmann, G. N.; Kruithof-de Julio, M. (15 March 2019). Cripto blockade reduces prostate cancer reactivity to microenvironment and metastatic potential. European Urology Supplements, 18(1), e1156-e1156. Elsevier 10.1016/S1569-9056(19)30833-4
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Zoni, Eugenio; Karkampouna, Sofia; Thalmann, George; Kruithof-de Julio, Marianna; Spahn, Martin (2018). Emerging aspects of microRNA interaction with TMPRSS2-ERG and endocrine therapy. Molecular and cellular endocrinology, 462(Pt A), pp. 9-16. Elsevier Ireland 10.1016/j.mce.2017.02.009
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Karow, Axel; Haubitz, Monika; Oppliger Leibundgut, Elisabeth; Helsen, Ingrid; Preising, Nicole; Steiner, Daniela; Dantonello, Tobias M.; Ammann, Roland A.; Roessler, Jochen; Kartal-Kaess, Mutlu; Röth, Alexander; Baerlocher, Gabriela M. (2021). Targeting Telomere Biology in Acute Lymphoblastic Leukemia. International journal of molecular sciences, 22(13) MDPI 10.3390/ijms22136653
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Humbert, Magali; Federzoni, Elena; Britschgi, Adrian; Schläfli, Anna; Valk, PJ; Kaufmann, Thomas; Haferlach, T.; Behre, G.; Simon, Hans-Uwe; Torbett, BE; Fey, Martin; Tschan, Mario (2014). The tumor suppressor gene DAPK2 is induced by the myeloid transcription factors PU.1 and C/EBPα during granulocytic differentiation but repressed by PML-RARα in APL. Journal of leukocyte biology, 95(1), pp. 83-93. Society for Leukocyte Biology 10.1189/jlb.1112608
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Schlegel, Irina; De Goüyon Matignon de Pontourade, Claire M F; Lincke, Joel-Benjamin; Keller, Irene; Zinkernagel, Martin S; Zysset-Burri, Denise C (2023). The Human Ocular Surface Microbiome and Its Associations with the Tear Proteome in Dry Eye Disease. International journal of molecular sciences, 24(18) MDPI 10.3390/ijms241814091
Bustamante Eduardo, Mariana; Keller, Irene; Schuster, Nathalie; Aebi, Stefan; Jaggi, Rolf (2023). Molecular characterization of breast cancer cell pools with normal or reduced ability to respond to progesterone: a study based on RNA-seq. Journal, genetic engineering & biotechnology, 21(1), p. 81. Springer 10.1186/s43141-023-00541-6
Spinelli, Marialuigia; Zdanowicz, Jarmila A; Keller, Irene; Nicholson, Pamela; Raio, Luigi; Amylidi-Mohr, Sofia; Mosimann, Beatrice; Surbek, Daniel; Mueller, Martin (2022). Hypertensive disorders of pregnancy share common cfDNA methylation profiles. Scientific Reports, 12(1), p. 19837. Nature Publishing Group 10.1038/s41598-022-24348-6
Mohsin, Hassan; Juanola, Oriol; Keller, Irene; Nanni, Paolo; Wolski, Witold; Martínez-López, Sebastián; Caparrós, Esther; Francés, Rubén; Moghadamrad, Sheida (2022). Paneth Cells Regulate Lymphangiogenesis under Control of Microbial Signals during Experimental Portal Hypertension. Biomedicines, 10(7) MDPI 10.3390/biomedicines10071503
Hobi, Gabriel; Cline, J Mark; Ethun, Kelly F; Simillion, Cedric; Keller, Irene; Stute, Petra (2022). Impact of 6 month conjugated equine estrogen versus estradiol-treatment on biomarkers and enriched gene sets in healthy mammary tissue of non-human primates. PLoS ONE, 17(3), e0264057. Public Library of Science 10.1371/journal.pone.0264057
Zysset-Burri, Denise C.; Schlegel, Irina; Lincke, Joel-Benjamin; Jaggi, Damian; Keller, Irene; Heller, Manfred; Braga Lagache, Sophie; Wolf, Sebastian; Zinkernagel, Martin S. (2021). Understanding the Interactions Between the Ocular Surface Microbiome and the Tear Proteome. Investigative ophthalmology & visual science, 62(10), p. 8. Association for Research in Vision and Ophthalmology 10.1167/iovs.62.10.8
Yilmaz, Bahtiyar; Mooser, Catherine; Keller, Irene; Li, Hai; Zimmermann, Jakob; Bosshard, Lars; Fuhrer, Tobias; Gomez de Agüero, Mercedes; Fernandez Trigo, Nerea; Tschanz-Lischer, Heidi; Limenitakis, Julien P.; Hardt, Wolf-Dietrich; McCoy, Kathleen; Stecher, Bärbel; Excoffier, Laurent; Sauer, Uwe; Ganal-Vonarburg, Stephanie C.; Macpherson, Andrew J. (2021). Long-term evolution and short-term adaptation of microbiota strains and sub-strains in mice. Cell host & microbe, 29(4), 650-663.e9. Cell Press 10.1016/j.chom.2021.02.001
Juanola, Oriol; Hassan, Mohsin; Kumar, Pavitra; Yilmaz, Bahtiyar; Keller, Irene; Simillion, Cedric; Engelmann, Cornelius; Tacke, Frank; Dufour, Jean-François; De Gottardi, Andrea; Moghadamrad, Sheida (2021). Intestinal microbiota drives cholestasis-induced specific hepatic gene expression patterns. Gut microbes, 13(1), pp. 1-20. Taylor & Francis Group 10.1080/19490976.2021.1911534
Joerger-Messerli, Marianne S.; Thomi, Gierin; Haesler, Valérie; Keller, Irene; Renz, Patricia; Surbek, Daniel V.; Schoeberlein, Andreina (2021). Human Wharton’s jelly mesenchymal stromal cell-derived small extracellular vesicles drive oligodendroglial maturation by restraining MAPK/ERK and Notch signaling pathways. Frontiers in cell and developmental biology, 9, p. 622539. Frontiers 10.3389/fcell.2021.622539
Herzog, Elio L; Wäfler, Melania; Keller, Irene; Wolf, Sebastian; Zinkernagel, Martin S; Zysset-Burri, Denise C (2021). The importance of age in compositional and functional profiling of the human intestinal microbiome. PLoS ONE, 16(10), e0258505. Public Library of Science 10.1371/journal.pone.0258505
Mohsin Hassan, Mohsin Hassan; Moghadamrad, Sheida; Sorribas, Marcel; G. Muntet, Sergi; Kellmann, Philipp; Trentesaux, Coralie; Fraudeau, Marie; Nanni, Paolo; Wolski, Witold; Keller, Irene; Hapfelmeier, Siegfried; Shroyer, Noah F; Wiest, Reiner; Romagnolo, Beatrice; De Gottardi, Andrea (2020). Paneth cells promote angiogenesis and regulate portal hypertension in response to microbial signals. Journal of hepatology, 73(3), pp. 628-639. Elsevier 10.1016/j.jhep.2020.03.019
Simon, R; Lischer, H. E. L.; Pieńkowska-Schelling, A.; Keller, I.; Häfliger, I. M.; Letko, A.; Schelling, C; Lühken, G; Drögemüller, C. (2020). New genomic features of the polled intersex syndrome variant in goats unraveled by long-read whole-genome sequencing. Animal genetics, 51(3), pp. 439-448. Wiley 10.1111/age.12918
Dąbrowska, Joanna; Keller, Irene; Karamon, Jacek; Kochanowski, Maciej; Gottstein, Bruno; Cencek, Tomasz; Frey, Caroline F.; Müller, Norbert (2020). Whole genome sequencing of a feline strain of Tritrichomonas foetus reveals massive genetic differences to bovine and porcine isolates. International journal for parasitology, 50(3), pp. 227-233. Elsevier 10.1016/j.ijpara.2019.12.007
Joerger Messerli, Marianne; Brosius Lutz, Amanda; Thomi, Gierin; Haesler, Valérie; Keller, Irene; Schoeberlein, Andreina; Surbek, Daniel (2020). 906: Characterization of microRNA cargo of Wharton’s jelly-derived extracellular vesicles and its future role in neuroregeneration. American journal of obstetrics and gynecology, 222(1), S562. Elsevier 10.1016/j.ajog.2019.11.917
Auray, Gael; Talker, Stephanie; Keller, Irene; Python, Sylvie; Gerber, Markus; Liniger, Matthias; Ganges, Llilianne; Bruggmann, Rémy; Ruggli, Nicolas; Summerfield, Artur (2020). High-Resolution Profiling of Innate Immune Responses by Porcine Dendritic Cell Subsets in vitro and in vivo. Frontiers in immunology, 11, p. 1429. Frontiers Research Foundation 10.3389/fimmu.2020.01429
Zysset-Burri, Denise C.; Keller, Irene; Berger, Lieselotte E.; Neyer, Peter J; Steuer, Christian; Wolf, Sebastian; Zinkernagel, Martin S. (2019). Retinal artery occlusion is associated with compositional and functional shifts in the gut microbiome and altered trimethylamine-N-oxide levels. Scientific reports, 9(1), p. 15303. Springer Nature 10.1038/s41598-019-51698-5
Frazão, Josias B; Colombo, Martino; Simillion, Cedric; Bilican, Adem; Keller, Irene; Wüthrich, Daniel; Zhu, Zhiqing; Okoniewski, Michal J; Bruggmann, Rémy; Condino-Neto, Antonio; Newburger, Peter E (2019). Gene expression in chronic granulomatous disease and interferon-γ receptor-deficient cells treated in vitro with interferon-γ. Journal of cellular biochemistry, 120(3), pp. 4321-4332. Wiley-Blackwell 10.1002/jcb.27718
Burkhard, Regula; Keller, Irene; Arambasic, Miroslav; Juskevicius, Darius; Tzankov, Alexandar; Lundberg, Pontus; Bruggmann, Rémy; Dirnhofer, Stephan; Radpour, Ramin; Novak, Urban (2019). TIRAP p.R81C is a novel lymphoma risk variant which enhances cell proliferation via NF-κB mediated signaling in B-cells. Haematologica - the hematology journal, 104(4), pp. 766-777. Ferrata-Storti Foundation 10.3324/haematol.2018.201590
Matthijs, Anneleen M F; Auray, Gael; Jakob, Virginie; Garcia-Nicolas, Obdulio; Braun, Roman O.; Keller, Irene; Bruggmann, Rémy; Devriendt, Bert; Boyen, Filip; Guzman, Carlos A; Michiels, Annelies; Haesebrouck, Freddy; Collin, Nicolas; Barnier-Quer, Christophe; Maes, Dominiek; Summerfield, Artur (2019). Systems Immunology Characterization of Novel Vaccine Formulations for Mycoplasma hyopneumoniae Bacterins. Frontiers in immunology, 10(1087), p. 1087. Frontiers Research Foundation 10.3389/fimmu.2019.01087
Stilinovic, Martina; Andina, Nicola; Tardivel, Aubry; Keller, Irene; Allam, Ramanjaneyulu (2019). RIBONUCLEASE INHIBITOR (RNH1) REGULATES HEMATOPOIETIC CELL SPECIFIC TRANSLATION. Experimental hematology, 76, S49. Elsevier 10.1016/j.exphem.2019.06.302
Talker, Stephanie; Baumann, Arnaud; Barut, Güliz Tuba; Keller, Irene; Bruggmann, Rémy; Summerfield, Artur (2018). Precise Delineation and Transcriptional Characterization of Bovine Blood Dendritic-Cell and Monocyte Subsets. Frontiers in immunology, 9(2505), p. 2505. Frontiers Research Foundation 10.3389/fimmu.2018.02505
Chevalier, Morgan Yoann Edwin; Vermij, Sarah Helena; Wyler, Kurt; Gillet, Ludovic; Keller, Irene; Abriel, Hugues (2018). Corrigendum: Transcriptomic analyses of murine ventricular cardiomyocytes. Scientific data, 5(180216), p. 180216. Nature Publishing Group 10.1038/sdata.2018.216
Hauser, Michel; Siegrist, Mark; Keller, Irene; Hofstetter, Wilhelm (2018). Healing of fractures in osteoporotic bones in mice treated with bisphosphonates - A transcriptome analysis. Bone, 112, pp. 107-119. Elsevier 10.1016/j.bone.2018.04.017
Halbritter, Aud H.; Fior, Simone; Keller, Irene; Billeter, Regula; Edwards, Peter J.; Holderegger, Rolf; Karrenberg, Sophie; Pluess, Andrea R.; Widmer, Alex; Alexander, Jake M. (2018). Trait differentiation and adaptation of plants along elevation gradients. Journal of evolutionary biology, 31(6), pp. 784-800. Wiley 10.1111/jeb.13262
Plüss, Michel; Kopps, Anna M; Keller, Irene; Meienberg, Janine; Caspar, Sylvan M; Dubacher, Nicolo; Bruggmann, Rémy; Vogel, Manfred; Matyas, Gabor (2017). Need for speed in accurate whole-genome data analysis: GENALICE MAP challenges BWA/GATK more than PEMapper/PECaller and Isaac. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 114(40), E8320-E8322. National Academy of Sciences NAS 10.1073/pnas.1713830114
Zinkernagel, Martin; Zysset-Burri, Denise Corinne; Keller, Irene; Berger, Lieselotte Erika; Leichtle, Alexander Benedikt; Largiadèr, Carlo Rodolfo; Fiedler, Martin; Wolf, Sebastian (2017). Association of the Intestinal Microbiome with the Development of Neovascular Age-Related Macular Degeneration. Scientific Reports, 7(40826), p. 40826. Nature Publishing Group 10.1038/srep40826
Anikster, Yair; Haack, Tobias B.; Vilboux, Thierry; Pode-Shakked, Ben; Thöny, Beat; Shen, Nan; Guarani, Virginia; Meissner, Thomas; Mayatepek, Ertan; Trefz, Friedrich K.; Marek-Yagel, Dina; Martinez, Aurora; Huttlin, Edward L.; Paulo, Joao A.; Berutti, Riccardo; Benoist, Jean-François; Imbard, Apolline; Dorboz, Imen; Heimer, Gali; Landau, Yuval; ... (2017). Biallelic Mutations in DNAJC12 Cause Hyperphenylalaninemia, Dystonia, and Intellectual Disability. American journal of human genetics, 100(2), pp. 257-266. Cell Press 10.1016/j.ajhg.2017.01.002
Leys, Marie; Keller, Irene; Räsänen, Katja; Gattolliat, Jean-Luc; Robinson, Christopher T. (2016). Distribution and population genetic variation of cryptic species of the Alpine mayfly Baetis alpinus (Ephemeroptera: Baetidae) in the Central Alps. BMC ecology and evolution, 16, p. 77. BioMed Central 10.1186/s12862-016-0643-y
Menzi, Fiona; Keller, Irene; Reber, Irene; Beck, Julia; Brenig, Bertram; Schütz, Ekkehard; Leeb, Tosso; Drögemüller, Cord (2016). Genomic amplification of the caprine EDNRA locus might lead to a dose dependent loss of pigmentation. Scientific Reports, 6, p. 28438. Nature Publishing Group 10.1038/srep28438
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Zoni, Eugenio; Astrologo, Letizia; Ng, Kiu Yan Charlotte; Piscuoglio, Salvatore; Melsen, Janine; Grosjean, Joël; Klima, Irena; Chen, Lanpeng; Snaar-Jagalska, Ewa B; Flanagan, Kenneth; van der Pluijm, Gabri; Kloen, Peter; Cecchini, Marco G; Kruithof-de Julio, Marianna; Thalmann, George (2019). Therapeutic targeting of CD146/MCAM reduces bone metastasis in prostate cancer. Molecular cancer research, 17(5), pp. 1049-1062. American Association for Cancer Research AACR 10.1158/1541-7786.MCR-18-1220
Astrologo, Letizia; Zoni, Eugenio; Karkampouna, Sofia; Gray, Peter C; Klima, Irena; Grosjean, Joël; Goumans, Marie J; Hawinkels, Lukas J A C; van der Pluijm, Gabri; Spahn, Martin; Thalmann, George; Ten Dijke, Peter; Kruithof-de Julio, Marianna (2017). ALK1Fc Suppresses the Human Prostate Cancer Growth in in Vitro and in Vivo Preclinical Models. Frontiers in cell and developmental biology, 5(104), p. 104. Frontiers 10.3389/fcell.2017.00104
Durrer, Isabelle; Ackermann, Daniel; Klossner, Rahel; Grössl, Michael; Vögel, Clarissa; du Toit, Therina; Vogt, Bruno; Jamin, Heidi; Mohaupt, Markus; Gennari-Moser, Carine (2024). No extra-adrenal aldosterone production in various human cell lines. Journal of molecular endocrinology, 72(3) Journal of Endocrinology 10.1530/JME-23-0100
Schaller, Theresa; Ringen, Julia; Fischer, Berenice; Bieler, Tabea; Perius, Katharina; Knopp, Tanja; Kommoss, Katharina S; Korn, Thomas; Heikenwälder, Mathias; Oelze, Matthias; Daiber, Andreas; Münzel, Thomas; Kramer, Daniela; Wenzel, Philip; Wild, Johannes; Karbach, Susanne; Waisman, Ari (2023). Reactive oxygen species produced by myeloid cells in psoriasis as a potential biofactor contributing to the development of vascular inflammation. BioFactors, 49(4), pp. 861-874. Wiley 10.1002/biof.1949
Kolly, Philippe; Knöpfli, Marina Janusheva; Dufour, Jean-François (2017). Effect of smoking on survival of patients with hepatocellular carcinoma. Liver international, 37(11), pp. 1682-1687. Wiley 10.1111/liv.13466
Gmür, Andrea; Kolly, Philippe; Knöpfli, Marina Janusheva; Dufour, Jean-François (October 2017). Quality of life assessment increases the accuracy survival prediction in HCC patient. Hepatology, 66(1), 715A-715A. Wiley Interscience
Kolly, Philippe; Reeves, Helen; Sangro, Bruno; Knöpfli, Marina Janusheva; Candinas, Daniel; Dufour, Jean-François (2015). Assessment of the Hong Kong Liver Cancer Staging System in Europe. Liver international, 36(6), pp. 911-917. Blackwell Munksgaard 10.1111/liv.13045
Schumann Burkard, Gabriela; Käser, Sandro; de Araújo, Patricia; Schimanski, Bernd; Naguleswaran, Arunasalam; Knüsel, Sebastian; Heller, Manfred; Roditi, Isabel (2013). Nucleolar proteins regulate stage-specific gene expression and ribosomal RNA maturation in Trypanosoma brucei. Molecular microbiology, 88(4), pp. 827-840. Blackwell Science 10.1111/mmi.12227
Raillard, Mathieu; Detotto, Carlotta; Grepper, Sandro; Beslac, Olgica; Fujioka-Kobayashi, Masako; Schaller, Benoît; Saulacic, Nikola (2019). Anaesthetic and Perioperative Management of 14 Male New Zealand White Rabbits for Calvarial Bone Surgery. Animals, 9(11) MDPI 10.3390/ani9110896
Kocbek, Vida; Grandi, Giovanni; Blank, Fabian; Wotzkow Alvarez, Carlos; Bersinger, Nick A.; Mueller, Michael D.; Kyo, Satoru; Mc Kinnon, Brett D. (2016). TNFα-induced IKKβ complex activation influences epithelial, but not stromal cell survival in endometriosis. Molecular human reproduction MHR, 22(11), pp. 768-777. Oxford University Press 10.1093/molehr/gaw054
Schanne, Daniel H; Koch, Alexander; Elicin, Olgun; Giger, Roland; Medová, Michaela; Zimmer, Yitzhak; Aebersold, Daniel M (2022). Prognostic and Predictive Biomarkers in Head and Neck Squamous Cell Carcinoma Treated with Radiotherapy-A Systematic Review. Biomedicines, 10(12) MDPI 10.3390/biomedicines10123288
Koch, Jonas P; Roth, Selina M; Quintin, Aurélie; Gavini, Jacopo; Orlando, Eleonora; Riedo, Rahel; Pozzato, Chiara; Hayrapetyan, Liana; Aebersold, Ruedi; Stroka, Deborah M; Aebersold, Daniel M; Medo, Matúš; Zimmer, Yitzhak; Medova, Michaela (2023). A DNA-PK phosphorylation site on MET regulates its signaling interface with the DNA damage response. Oncogene, 42(26), pp. 2113-2125. Nature Publishing Group 10.1038/s41388-023-02714-6
Pozzato, Chiara; Koch, Jonas Paul; Riedo, Rahel; Hayrapetyan, Liana; Medo, Matúš; Aebersold, Daniel Matthias; Zimmer, Yitzhak; Medova, Michaela (2023). A newly discovered phosphorylation site of the MET receptor tyrosine kinase, Ser1016, in mediating tumour growth and cancer therapy resistance. (Unpublished). In: BCRC Retreat. Bern, Switzerland. 26.06.2023.
Lipp, Jesse J; Wang, Limei; Yang, Haitang; Yao, Feng; Harrer, Nathalie; Müller, Stefan; Berezowska, Sabina; Dorn, Patrick; Marti, Thomas M; Schmid, Ralph A; Hegedüs, Belazs; Souabni, Abdallah; Carotta, Sebastian; Pearson, Mark A; Sommergruber, Wolfgang; Kocher, Gregor J; Hall, Sean R R (2022). Functional and molecular characterization of PD1+ tumor-infiltrating lymphocytes from lung cancer patients. Oncoimmunology, 11(1), p. 2019466. Taylor & Francis 10.1080/2162402X.2021.2019466
Wang, Limei; Yang, Haitang; Dorn, Patrick; Berezowska, Sabina; Blank, Fabian; Wotzkow, Carlos; Marti, Thomas M; Peng, Ren-Wang; Harrer, Nathalie; Sommergruber, Wolfgang; Kocher, Gregor J; Schmid, Ralph A; Hall, Sean R R (2021). Peritumoral CD90+CD73+ cells possess immunosuppressive features in human non-small cell lung cancer. EBioMedicine, 73, p. 103664. Elsevier 10.1016/j.ebiom.2021.103664
Kocher, Gregor; Al-Hurani, Mohammad; Dorn, Patrick; Lutz, Jon (2020). Thoracoscopic diaphragm plication. Multimedia Manual of Cardiothoracic Surgery, 2020 Oxford University Press 10.1510/mmcts.2020.054
Wang, Limei; Dorn, Patrick; Zeinali, Soheila; Froment, Laurène; Berezowska, Sabina; Kocher, Gregor; Alves, Marco P; Brügger, Melanie; Esteves, Blandina I.O.; Blank, Fabian; Wotzkow, Carlos; Steiner, Selina; Amacker, Mario; Peng, Ren-Wang; Marti, Thomas; Guenat, Olivier Thierry; Bode, Peter Karl; Moehrlen, Ueli; Schmid, Ralph and Hall, Sean (2020). CD90+CD146+ identifies a pulmonary mesenchymal cell subtype with both immune modulatory and perivascular-like function in postnatal human lung. American journal of physiology - lung cellular and molecular physiology, 318(4), L813-L830. American Physiological Society 10.1152/ajplung.00146.2019
Pierog, Jaroslaw Stanislaw; Fytianos, Kleanthis; Tamò, Luca Giuseppe Athos; Simillion, Cedric André Marie; Taddeo, Adriano; Kocher, Gregor; Gugger, Mathias; Grodzki, Tomasz; Heller, Manfred; Blank, Fabian; Geiser, Thomas; Schmid, Ralph; Gazdhar, Amiq (2019). Stem cell secretome attenuates acute rejection in rat lung allotransplant. Interactive cardiovascular and thoracic surgery, 28(5), pp. 812-818. Oxford University Press 10.1093/icvts/ivy306
Tièche, Colin; Gao, Yanyun; Bührer, Elias; Hobi, Nina; Berezowska, Sabina Anna; Wyler, Kurt; Froment, Laurène; Weis, Stefan; Peng, Ren-Wang; Bruggmann, Rémy; Schär, Primo; Amrein, Michael Alex; Hall, Sean; Dorn, Patrick; Kocher, Gregor; Riether, Carsten; Ochsenbein, Adrian; Schmid, Ralph; Marti, Thomas (2019). Tumor Initiation Capacity and Therapy Resistance Are Differential Features of EMT-Related Subpopulations in the NSCLC Cell Line A549. Neoplasia, 21(2), pp. 185-196. Elsevier 10.1016/j.neo.2018.09.008
Shun-Qing, Liang; Bührer, Elias; Berezowska, Sabina Anna; Marti, Thomas; Xu, Duo; Froment, Laurène; Yang, Haitang; Hall, Sean; Vassella, Erik; Zhang, Yang; Kocher, Gregor; Amrein, Michael Alex; Riether, Carsten; Ochsenbein, Adrian; Schmid, Ralph; Peng, Ren-Wang (2019). mTOR mediates a mechanism of resistance to chemotherapy and defines a rational combination strategy to treat KRAS-mutant lung cancer. Oncogene, 38(5), pp. 622-636. Nature Publishing Group 10.1038/s41388-018-0479-6
Xu, Duo; Shun-Qing, Liang; Yang, Haitang; Lüthi, Ursina; Riether, Carsten; Berezowska, Sabina Anna; Marti, Thomas; Hall, Sean; Bruggmann, Rémy; Kocher, Gregor; Schmid, Ralph; Peng, Ren-Wang (2018). Increased sensitivity to apoptosis upon endoplasmic reticulum stress-induced activation of the unfolded protein response in chemotherapy-resistant malignant pleural mesothelioma. British journal of cancer, 119(1), pp. 65-75. Nature Publishing Group 10.1038/s41416-018-0145-3
Liu, Shengchen; do Amaral Campos, Pedro Paulo Zanella; Casoni, Daniela; Berger, David; Kohler, Andreas; Bloch, Andreas; Bervini, David; Setzer, Florian; Cameron, David R.; Z'Graggen, Werner; Hana, Anisa; Langer, Rupert; Corrêa, Thiago D.; Beldi, Guido; Takala, Jukka; Jakob, Stephan M. (2020). Defense mechanisms to increasing back pressure for hepatic oxygen transport and venous return in porcine fecal peritonitis. American journal of physiology - gastrointestinal and liver physiology, 319(3), G289-G302. American Physiological Society 10.1152/ajpgi.00216.2020
Li, Bojun; Kohler, Hans P.; Schroeder, Verena (2020). Identification of amino acid residues that are crucial for FXIII-A intersubunit interactions and stability. Blood, 135(2), pp. 145-152. American Society of Hematology 10.1182/blood.2019002127
Li, Bojun; Billur, Ramya; Maurer, Muriel C; Kohler, Hans-Peter; Raddatz Müller, Pascale; Alberio, Lorenzo; Schroeder, Verena (2018). Proline 36 of the Factor XIII Activation Peptide Plays a Crucial Role in Substrate Recognition and Zymogen Activation. Thrombosis and haemostasis, 118(12), pp. 2037-2045. Thieme 10.1055/s-0038-1675600
Li, Bojun; Borhany, Munira; Abid, Madiha; Kohler, Hans-Peter; Schroeder, Verena (2018). Identification of a novel nonsense mutation leading to congenital factor XIII deficiency. Thrombosis research, 165, pp. 83-85. Elsevier 10.1016/j.thromres.2018.03.019
Kolly, Philippe; Knöpfli, Marina Janusheva; Dufour, Jean-François (2017). Effect of smoking on survival of patients with hepatocellular carcinoma. Liver international, 37(11), pp. 1682-1687. Wiley 10.1111/liv.13466
Kolly, Philippe; Waidmann, Oliver; Vermehren, Johannes; Moreno, Christophe; Vögeli, Isabelle; Berg, Thomas; Semela, David; Zeuzem, Stefan; Dufour, Jean-François (2017). Hepatocellular carcinoma recurrence after direct antiviral agent treatment: A European multicentre study. Journal of hepatology, 67(4), pp. 876-878. Elsevier 10.1016/j.jhep.2017.07.007
Kolly, Philippe; Dufour, Jean-François (2017). Patients with hepatocellular carcinoma: Your address matters! Journal of hepatology, 66(3), pp. 480-481. Elsevier 10.1016/j.jhep.2016.11.026
Saran, Uttara; Humar, Bostjan; Kolly, Philippe; Dufour, Jean-François (2016). Hepatocellular carcinoma and lifestyles. Journal of hepatology, 64(1), pp. 203-214. Elsevier 10.1016/j.jhep.2015.08.028
Kolly, Philippe; Dufour, Jean-François (2016). Reply to «Lack of evidence of an effect of Direct Acting Antivirals on the recurrence of hepatocellular carcinoma: The ANRS collaborative study group on hepatocellular carcinoma (ANRS CO22 HEPATHER, CO12 CIRVIR and CO23 CUPILT cohorts)». Journal of hepatology, 65(6), pp. 1268-1269. Elsevier 10.1016/j.jhep.2016.07.032
Kolly, Philippe; Dufour, Jean-François (2016). Surveillance for Hepatocellular Carcinoma in Patients with NASH. Diagnostics, 6(2), p. 22. MDPI 10.3390/diagnostics6020022
Kolly, Philippe; Reeves, Helen; Sangro, Bruno; Knöpfli, Marina Janusheva; Candinas, Daniel; Dufour, Jean-François (2015). Assessment of the Hong Kong Liver Cancer Staging System in Europe. Liver international, 36(6), pp. 911-917. Blackwell Munksgaard 10.1111/liv.13045
Pocha, Christine; Kolly, Philippe; Dufour, Jean-François (2015). Nonalcoholic Fatty Liver Disease-Related Hepatocellular Carcinoma: A Problem of Growing Magnitude. Seminars in liver disease, 35(3), pp. 304-317. Thieme Medical Publishers 10.1055/s-0035-1562949
Deng, Haibin; Ge, Huixiang; Dubey, Christelle; Losmanova, Tereza; Medova, Michaela; Konstantinidou, Georgia; Mutlu, Seyran Mathilde; Birrer, Fabienne Esther; Brodie, Tess Melinda; Stroka, Deborah; Wang, Wenxiang; Peng, Ren-Wang; Dorn, Patrick; Marti, Thomas Michael (2023). An optimized protocol for the generation and monitoring of conditional orthotopic lung cancer in the KP mouse model using an adeno-associated virus vector compatible with biosafety level 1. Cancer immunology, immunotherapy : CII, 72(12), pp. 4457-4470. Springer 10.1007/s00262-023-03542-z
Stähli, Patrick; Becchetti, Chiara; Korta Martiartu, Naiara; Berzigotti, Annalisa; Frenz, Martin; Jaeger, Michael (2023). First-in-human diagnostic study of hepatic steatosis with computed ultrasound tomography in echo mode. Communications medicine, 3(1), p. 176. Springer Nature 10.1038/s43856-023-00409-3
Nyilas, Sylvia Meryl; Bauman, Grzegorz; Sommer, Gregor; Stranzinger, Enno; Pusterla, Orso; Frey, Urs Peter; Korten, Insa Christina Severine; Singer, Florian; Casaulta Aebischer, Carmen; Bieri, Oliver; Latzin, Philipp (2017). Novel magnetic resonance technique for functional imaging of cystic fibrosis lung disease. European respiratory journal, 50(6) European Respiratory Society 10.1183/13993003.01464-2017
Naamneh Elzenaty, Rawda; Martinez de Lapiscina, Idoia; Kouri, Chrysanthi; Sauter, Kay-Sara; Sommer, Grit; Castaño, Luis; Flück, Christa E (2024). Characterization of 35 novel NR5A1/SF-1 variants identified in individuals with atypical sexual development: The SF1next study. (In Press). The journal of clinical endocrinology and metabolism Oxford University Press 10.1210/clinem/dgae251
Kouri, Chrysanthi; Sommer, Grit; Martinez de LaPiscina, Idoia; Naamneh Elzenaty, Rawda; Tack, Lloyd J W; Cools, Martine; Ahmed, S Faisal; Flück, Christa E (2024). Clinical and genetic characteristics of a large international cohort of individuals with rare NR5A1/SF-1 variants of sex development. EBioMedicine, 99, p. 104941. Elsevier 10.1016/j.ebiom.2023.104941
Martinez de LaPiscina, Idoia; Kouri, Chrysanthi; Aurrekoetxea, Josu; Sanchez, Mirian; Naamneh Elzenaty, Rawda; Sauter, Kay-Sara; Camats, Núria; Grau, Gema; Rica, Itxaso; Rodriguez, Amaia; Vela, Amaia; Cortazar, Alicia; Alonso-Cerezo, Maria Concepción; Bahillo, Pilar; Bertholt, Laura; Esteva, Isabel; Castaño, Luis; Flück, Christa E (2023). Genetic reanalysis of patients with a difference of sex development carrying the NR5A1/SF-1 variant p.Gly146Ala has discovered other likely disease-causing variations. PLoS ONE, 18(7), e0287515. Public Library of Science 10.1371/journal.pone.0287515
Safari, Fatemeh; Yeoh, Wen Jie; Perret-Gentil, Saskia; Klenke, Frank; Dolder, Silvia; Hofstetter, Wilhelm; Krebs, Philippe (2024). SHIP1 deficiency causes inflammation-dependent retardation in skeletal growth. Life science alliance, 7(5) EMBO Press 10.26508/lsa.202302297
Safari, Fatemeh; Yeoh, Jeremy; Siegrist, Mark; Dolder, Silvia; Strunz, Franziska; Hofstetter, Willy; Krebs, Philippe (May 2022). Inositol Phosphatase SHIP1 – a Regulator of Osteoclast Lineage Cell Development and Activity. Bone reports, 16, p. 101404. Elsevier 10.1016/j.bonr.2022.101404
Safari, Fatemeh; Yeoh, Jeremy; Bringardner, Margaux; Siegrist, Mark; Dolder, Silvia; Strunz, Franziska; Hofstetter, Willy; Krebs, Philippe (April 2021). The inositol phosphatase SHIP1 regulates skeletal development. Bone reports, 14, p. 100795. Elsevier 10.1016/j.bonr.2021.100795
Pastille, Eva; Wasmer, Marie-Hélène Christin; Adamczyk, Alexandra; Vu, Vivian Pham; Mager, Lukas F; Phuong, Nhi Ngo Thi; Palmieri, Vittoria; Simillion, Cedric André Marie; Hansen, Wiebke; Kasper, Stefan; Schuler, Martin; Muggli, Beat; McCoy, Kathy D; Buer, Jan; Zlobec, Inti; Westendorf, Astrid M; Krebs, Philippe (2019). The IL-33/ST2 pathway shapes the regulatory T cell phenotype to promote intestinal cancer. Mucosal immunology, 12(4), pp. 990-1003. Nature Publishing Group 10.1038/s41385-019-0176-y
Mager, Lukas; Riether, Carsten; Schürch, Christian; Banz Wälti, Yara; Wasmer, Marie-Hélène Christin; Stuber Roos, Regula; Theocharides, Alexandre; Li, Xiaohong; Xia, Yu; Saito, Hirohisa; Nakae, Susumu; Baerlocher, Gabriela M.; Manz, Markus G; McCoy, Kathleen; Macpherson, Andrew; Ochsenbein, Adrian; Beutler, Bruce; Krebs, Philippe (2015). IL-33 signaling contributes to the pathogenesis of myeloproliferative neoplasms. Journal of clinical investigation, 125(7), pp. 2579-2591. American Society for Clinical Investigation 10.1172/JCI77347
Plähn, Nils M J; Poli, Simone; Peper, Eva S; Açıkgöz, Berk C; Kreis, Roland; Ganter, Carl; Bastiaansen, Jessica A M (2024). Getting the phase consistent: The importance of phase description in balanced steady-state free precession MRI of multi-compartment systems. (In Press). Magnetic resonance in medicine Wiley-Liss 10.1002/mrm.30033
Rizzo, Rudy; Kreis, Roland (2023). Multi-echo single-shot spectroscopy combined with simultaneous 2D model fitting for fast and accurate measurement of metabolite-specific concentrations and T2 relaxation times. NMR in biomedicine, 36(12), e5016. Wiley Interscience 10.1002/nbm.5016
Rizzo, Rudy; Dziadosz, Martyna; Kyathanahally, Sreenath P; Shamaei, Amirmohammad; Kreis, Roland (2023). Quantification of MR spectra by deep learning in an idealized setting: Investigation of forms of input, network architectures, optimization by ensembles of networks, and training bias. Magnetic resonance in medicine, 89(5), pp. 1707-1727. Wiley-Liss 10.1002/mrm.29561
Marjańska, Małgorzata; Deelchand, Dinesh K; Kreis, Roland (2022). Results and interpretation of a fitting challenge for MR spectroscopy set up by the MRS study group of ISMRM. Magnetic resonance in medicine, 87(1), pp. 11-32. Wiley-Liss 10.1002/mrm.28942
Kreis, Roland; Boer, Vincent; Choi, In-Young; Cudalbu, Cristina; de Graaf, Robin A; Gasparovic, Charles; Heerschap, Arend; Krššák, Martin; Lanz, Bernard; Maudsley, Andrew A; Meyerspeer, Martin; Near, Jamie; Öz, Gülin; Posse, Stefan; Slotboom, Johannes; Terpstra, Melissa; Tkáč, Ivan; Wilson, Martin; Bogner, Wolfgang (2021). Terminology and concepts for the characterization of in vivo MR spectroscopy methods and MR spectra: Background and experts' consensus recommendations. NMR in biomedicine, 34(5), e4347. Wiley Interscience 10.1002/nbm.4347
Cudalbu, Cristina; Behar, Kevin L; Bhattacharyya, Pallab K; Bogner, Wolfgang; Borbath, Tamas; de Graaf, Robin A; Gruetter, Rolf; Henning, Anke; Juchem, Christoph; Kreis, Roland; Lee, Phil; Lei, Hongxia; Marjańska, Małgorzata; Mekle, Ralf; Murali-Manohar, Saipavitra; Považan, Michal; Rackayová, Veronika; Simicic, Dunja; Slotboom, Johannes; Soher, Brian J; ... (2021). Contribution of macromolecules to brain 1 H MR spectra: Experts' consensus recommendations. NMR in biomedicine, 34(5), e4393. Wiley 10.1002/nbm.4393
Tkáč, Ivan; Deelchand, Dinesh; Dreher, Wolfgang; Hetherington, Hoby; Kreis, Roland; Kumaragamage, Chathura; Považan, Michal; Spielman, Daniel M; Strasser, Bernhard; de Graaf, Robin A (2021). Water and lipid suppression techniques for advanced 1 H MRS and MRSI of the human brain: Experts' consensus recommendations. NMR in biomedicine, 34(5), e4459. Wiley 10.1002/nbm.4459
Choi, In-Young; Kreis, Roland (2021). Advanced methodology for in vivo magnetic resonance spectroscopy. NMR in biomedicine, 34(5), e4504. Wiley 10.1002/nbm.4504
Hoefemann, Maike; Döring, André; Fichtner, Nicole Damara; Kreis, Roland (2021). Combining chemical exchange saturation transfer and 1 H magnetic resonance spectroscopy for simultaneous determination of metabolite concentrations and effects of magnetization exchange. Magnetic resonance in medicine, 85(4), pp. 1766-1782. Wiley-Liss 10.1002/mrm.28574
Dziadosz, Martyna; Bogner, Wolfgang; Kreis, Roland (2020). Non-water-excitation MR spectroscopy techniques to explore exchanging protons in human brain at 3 T. Magnetic resonance in medicine, 84(5), pp. 2352-2363. Wiley 10.1002/mrm.28322
Hoefemann, Maike; Bolliger, Christine Sandra; Chong, Daniel G.Q.; van der Veen, Jan Willem; Kreis, Roland (2020). Parameterization of metabolite and macromolecule contributions in interrelated MR spectra of human brain using multidimensional modeling. NMR in biomedicine, 33(9), e4328. Wiley 10.1002/nbm.4328
Obmann, Verena Carola; Kreis, Roland; Sack, I; Berzigotti, Annalisa; Obmann, M; Heverhagen, Johannes; Christe, Andreas; Huber, Adrian Thomas (July 2020). Single - and multi-frequency MR elastography with gradient-recalled echo and spin-echo echo-planar acquisitions: Comparison of robustness and intersegmental liver stiffness variation (Unpublished). In: ECR 2020. Vienna. July 15-19, 2020.
Trepp, Roman; Muri, Raphaela; Abgottspon, Stephanie; Bosanska, Lenka; Hochuli, Michel; Slotboom, Johannes; Rummel, Christian; Kreis, Roland; Everts, Regula (2020). Correction to: Impact of phenylalanine on cognitive, cerebral, and neurometabolic parameters in adult patients with phenylketonuria (the PICO study): a randomized, placebo-controlled, crossover, noninferiority trial. Trials, 21(1), p. 561. BioMed Central 10.1186/s13063-020-04489-7
Meienberg, Fabian; Loher, Hannah; Bucher, Julie; Jenni, Stefan; Krüsi, Marion; Kreis, Roland; Boesch, Christoph Hans; Betz, Matthias Johannes; Christ, Emanuel (2019). The effect of exercise on intramyocellular acetylcarnitine (AcCtn) concentration in adult growth hormone deficiency (GHD). Scientific reports, 9(1), p. 19431. Springer Nature 10.1038/s41598-019-55942-w
Döring, André; Kreis, Roland (2019). Magnetic resonance spectroscopy extended by oscillating diffusion gradients: Cell-specific anomalous diffusion as a probe for tissue microstructure in human brain. NeuroImage, 202, p. 116075. Elsevier 10.1016/j.neuroimage.2019.116075
Höfemann, Maike Svenja; Adalid López, Víctor Javier; Kreis, Roland (2019). Optimizing acquisition and fitting conditions for 1 H MR spectroscopy investigations in global brain pathology. NMR in biomedicine, 32(11), e4161. Wiley Interscience 10.1002/nbm.4161
Wilson, Martin; Andronesi, Ovidiu; Barker, Peter B; Bartha, Robert; Bizzi, Alberto; Bolan, Patrick J; Brindle, Kevin M; Choi, In-Young; Cudalbu, Cristina; Dydak, Ulrike; Emir, Uzay E; Gonzalez, Ramon G; Gruber, Stephan; Gruetter, Rolf; Gupta, Rakesh K; Heerschap, Arend; Henning, Anke; Hetherington, Hoby P; Huppi, Petra S; Hurd, Ralph E; ... (2019). Methodological consensus on clinical proton MRS of the brain: Review and recommendations. Magnetic resonance in medicine, 82(2), pp. 527-550. Wiley-Liss 10.1002/mrm.27742
Surowska, Anna; Jegatheesan, Prasanthi; Campos, Vanessa; Marques, Anne-Sophie; Egli, Léonie; Cros, Jérémy; Rosset, Robin; Lecoultre, Virgile; Kreis, Roland; Boesch, Christoph Hans; Pouymayou, Bertrand Michel Marie; Kreis, Roland; Tappy, Luc (2019). Effects of Dietary Protein and Fat Content on Intrahepatocellular and Intramyocellular Lipids during a 6-Day Hypercaloric, High Sucrose Diet: A Randomized Controlled Trial in Normal Weight Healthy Subjects. Nutrients, 11(1) Molecular Diversity Preservation International MDPI 10.3390/nu11010209
Döring, André; Adalid López, Víctor Javier; Boesch, Christoph Hans; Kreis, Roland (2018). Diffusion-weighted magnetic resonance spectroscopy boosted by simultaneously acquired water reference signals. Magnetic resonance in medicine, 80(6), pp. 2326-2338. Wiley-Liss 10.1002/mrm.27222
Kyathanahally, Sreenath Pruthviraj; Döring, André; Kreis, Roland (2018). Deep learning approaches for detection and removal of ghosting artifacts in MR spectroscopy. Magnetic resonance in medicine, 80(3), pp. 851-863. Wiley-Liss 10.1002/mrm.27096
Giapitzakis, Ioannis-Angelos; Shao, Tingting; Avdievich, Nikolai; Mekle, Ralf; Kreis, Roland; Henning, Anke (2018). Metabolite-cycled STEAM and semi-LASER localization for MR spectroscopy of the human brain at 9.4T. Magnetic resonance in medicine, 79(4), pp. 1841-1850. Wiley-Liss 10.1002/mrm.26873
Obmann, Verena Carola; Mertineit, Nando; Berzigotti, Annalisa; Marx, Christina Lynn; Ebner, Lukas; Kreis, Roland; Vermathen, Peter; Heverhagen, Johannes; Christe, Andreas; Huber, Adrian Thomas (2018). CT predicts liver fibrosis: Prospective evaluation of morphology- and attenuation-based quantitative scores in routine portal venous abdominal scans. PLoS ONE, 13(7), e0199611. Public Library of Science 10.1371/journal.pone.0199611
Adalid López, Víctor Javier; Döring, André; Kyathanahally, Sreenath Pruthviraj; Bolliger, Christine Sandra; Boesch, Christoph Hans; Kreis, Roland (2017). Fitting interrelated datasets: metabolite diffusion and general lineshapes. Magma, 30(5), pp. 429-448. Springer 10.1007/s10334-017-0618-z
Bucher, Julie Véronique; Krüsi, Marion Rebekka; Züger, Thomas; Ith, Michael; Stettler, Christoph; Diem, Peter; Boesch, Chris; Kreis, Roland; Christ, Emanuel (2014). The effect of a single 2 h bout of aerobic exercise on ectopic lipids in skeletal muscle, liver and the myocardium. Diabetologia, 57(5), pp. 1001-1005. Springer 10.1007/s00125-014-3193-0
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Vasciaveo, Alessandro; Arriaga, Juan Martin; Nunes de Almeida, Francisca; Zou, Min; Douglass, Eugene F; Picech, Florencia; Shibata, Maho; Rodriguez-Calero, Antonio; de Brot, Simone; Mitrofanova, Antonina; Chua, Chee Wai; Karan, Charles; Realubit, Ronald; Pampou, Sergey; Kim, Jaime Y; Afari, Stephanie N; Mukhammadov, Timur; Zanella, Luca; Corey, Eva; Alvarez, Mariano J; ... (2023). OncoLoop: A network-based precision cancer medicine framework. Cancer discovery, 13(2), pp. 386-409. American Association for Cancer Research 10.1158/2159-8290.CD-22-0342
Triscott, Joanna; Reist, Matthias; Küng, Lukas; Moselle, Francielle C; Lehner, Marika; Gallon, John; Ravi, Archna; Arora, Gurpreet K; De Brot, Simone; Lundquist, Mark; Gallart-Ayala, Hector; Ivanisevic, Julijana; Piscuoglio, Salvatore; Cantley, Lewis C; Emerling, Brooke M; Rubin, Mark A (2023). PI5P4Kα supports prostate cancer metabolism and exposes a survival vulnerability during androgen receptor inhibition. Science Advances, 9(5), eade8641. American Association for the Advancement of Science 10.1126/sciadv.ade8641
Rheinbay, Esther; Nielsen, Morten Muhlig; Abascal, Federico; Wala, Jeremiah A; Shapira, Ofer; Tiao, Grace; Hornshøj, Henrik; Hess, Julian M; Juul, Randi Istrup; Lin, Ziao; Feuerbach, Lars; Sabarinathan, Radhakrishnan; Madsen, Tobias; Kim, Jaegil; Mularoni, Loris; Shuai, Shimin; Lanzos, Andrés; Herrmann, Carl; Maruvka, Yosef E; Shen, Ciyue; ... (2023). Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. Nature, 614(7948), E40. Springer Nature 10.1038/s41586-022-05599-9
Rubin, Mark A; Amin, Mahul B; Compérat, Eva; Gill, Anthony; Hartman, Arndt; Menon, Santosh; Raspollini, Maria; Srigley, John; Tan, Puay Hoon; Ticktoo, Satish; Tsuzuki, Toyonori; Turajlic, Samra; Cree, Ian; Berney, Daniel; Moch, Holger; Netto, George J (2023). Reply to Yongbao Wei, Haijian Huang, and Liefu Ye's Letter to the Editor re: George J. Netto, Mahul B. Amin, Daniel M. Berney, et al. The 2022 World Health Organization Classification of Tumors of the Urinary System and Male Genital Organs-Part B: Prostate and Urinary Tract Tumors. Eur Urol. In press. https://doi.org/10.1016/j.eururo.2022.07.002. European urology, 83(1), e16-e17. Elsevier 10.1016/j.eururo.2022.09.021
Cyrta, Joanna; Rosiene, Joel; Bareja, Rohan; Kudman, Sarah; Al Zoughbi, Wael; Motanagh, Samaneh; Wilkes, David C.; Eng, Kenneth; Zhang, Tuo; Sticca, Evan; Mathew, Susan; Rubin, Mark A.; Imielinksi, Marcin; Mosquera, Juan Miguel (2022). Whole-genome characterization of myoepithelial carcinomas of the soft tissue. Cold Spring Harbor molecular case studies, 8(7) Cold Spring Harbor Laboratory Press 10.1101/mcs.a006227
Akhoundova, Dilara; Feng, Felix Y; Pritchard, Colin C; Rubin, Mark A (2022). Molecular Genetics of Prostate Cancer and Role of Genomic Testing. Surgical pathology clinics, 15(4), pp. 617-628. 10.1016/j.path.2022.08.002
Zeng, Qiqun; Saghafinia, Sadegh; Chryplewicz, Agnieszka; Fournier, Nadine; Christe, Lucine; Xie, Yu-Qing; Guillot, Jeremy; Yucel, Simge; Li, Pumin; Galván, José A; Karamitopoulou, Eva; Zlobec, Inti; Ataca, Dalya; Gallean, Fleuriane; Zhang, Peng; Rodríguez-Calero, José Antonio; Rubin, Mark; Tichet, Mélanie; Homicsko, Krisztian and Hanahan, Douglas (2022). Aberrant hyperexpression of the RNA binding protein FMRP in tumors mediates immune evasion. Science, 378(6621), eabl7207. American Association for the Advancement of Science 10.1126/science.abl7207
Ferguson, Alison M; Rubin, Mark A (2022). Lineage plasticity in prostate cancer: Looking beyond intrinsic alterations. Cancer letters, 548(215901), p. 215901. Elsevier 10.1016/j.canlet.2022.215901
Moch, Holger; Amin, Mahul B; Berney, Daniel M; Compérat, Eva M; Gill, Anthony J; Hartmann, Arndt; Menon, Santosh; Raspollini, Maria R; Rubin, Mark A; Srigley, John R; Hoon Tan, Puay; Tickoo, Satish K; Tsuzuki, Toyonori; Turajlic, Samra; Cree, Ian; Netto, George J (2022). The 2022 World Health Organization Classification of Tumours of the Urinary System and Male Genital Organs-Part A: Renal, Penile, and Testicular Tumours. European urology, 82(5), pp. 458-468. Elsevier 10.1016/j.eururo.2022.06.016
Netto, George J; Amin, Mahul B; Berney, Daniel M; Compérat, Eva M; Gill, Anthony J; Hartmann, Arndt; Menon, Santosh; Raspollini, Maria R; Rubin, Mark A; Srigley, John R; Hoon Tan, Puay; Tickoo, Satish K; Tsuzuki, Toyonori; Turajlic, Samra; Cree, Ian; Moch, Holger (2022). The 2022 World Health Organization Classification of Tumors of the Urinary System and Male Genital Organs-Part B: Prostate and Urinary Tract Tumors. European urology, 82(5), pp. 469-482. Elsevier 10.1016/j.eururo.2022.07.002
Lobo, João; Ohashi, Riuko; Amin, Mahul B; Berney, Daniel M; Compérat, Eva M; Cree, Ian A; Gill, Anthony J; Hartmann, Arndt; Menon, Santosh; Netto, George J; Raspollini, Maria R; Rubin, Mark A; Tan, Puay Hoon; Tickoo, Satish K; Tsuzuki, Toyonori; Turajlic, Samra; Zhou, Ming; Srigley, John R; Moch, Holger (2022). The WHO 2022 landscape of papillary and chromophobe renal cell carcinoma. Histopathology, 81(4), pp. 426-438. Wiley 10.1111/his.14700
Kench, James G; Amin, Mahul B; Berney, Daniel M; Compérat, Eva M; Cree, Ian A; Gill, Anthony J; Hartmann, Arndt; Menon, Santosh; Moch, Holger; Netto, George J; Raspollini, Maria R; Rubin, Mark A; Tan, Puay Hoon; Tsuzuki, Toyonori; Turjalic, Samra; van der Kwast, Theo H; Zhou, Ming; Srigley, John R (2022). WHO Classification of Tumours 5th Edition: Evolving Issues in Classification, Diagnosis and Prognostication of Prostate Cancer. Histopathology, 81(4), pp. 447-458. Wiley 10.1111/his.14711
Compérat, Eva; Amin, Mahul B; Berney, Dan M; Cree, Ian; Menon, Santosh; Moch, Holger; Netto, George J; Rao, Vishal; Raspollini, Maria Rosaria; Rubin, Mark A; Srigley, John R; Tan, Puay Hoon; Tickoo, Satish Kumar; Turajlic, Samra; Tsuzuki, Toyonori (2022). What's new in WHO fifth edition - urinary tract. Histopathology, 81(4), pp. 439-446. Wiley 10.1111/his.14764
Akhoundova, Dilara; Rubin, Mark A (2022). Clinical application of advanced multi-omics tumor profiling: Shaping precision oncology of the future. Cancer cell, 40(9), pp. 920-938. Cell Press 10.1016/j.ccell.2022.08.011
Cotter, Kellie; Rubin, Mark A (2022). The evolving landscape of prostate cancer somatic mutations. The Prostate, 82 Suppl 1(Suppl 1), S13-S24. Wiley 10.1002/pros.24353
Orlando, Francesco; Romanel, Alessandro; Trujillo, Blanca; Sigouros, Michael; Wetterskog, Daniel; Quaini, Orsetta; Leone, Gianmarco; Xiang, Jenny Z; Wingate, Anna; Tagawa, Scott; Jayaram, Anuradha; Linch, Mark; Jamal-Hanjani, Mariam; Swanton, Charles; Rubin, Mark A; Wyatt, Alexander W; Beltran, Himisha; Attard, Gerhardt; Demichelis, Francesca (2022). Allele-informed copy number evaluation of plasma DNA samples from metastatic prostate cancer patients: the PCF_SELECT consortium assay. NAR cancer, 4(2), zcac016. Oxford University Press 10.1093/narcan/zcac016
Rodriguez-Calero, Antonio; Gallon, John; Akhoundova, Dilara; Maletti, Sina; Ferguson, Alison; Cyrta, Joanna; Amstutz, Ursula; Garofoli, Andrea; Paradiso, Viola; Tomlins, Scott A; Hewer, Ekkehard; Genitsch, Vera; Fleischmann, Achim; Vassella, Erik; Rushing, Elisabeth J; Grobholz, Rainer; Fischer, Ingeborg; Jochum, Wolfram; Cathomas, Gieri; Osunkoya, Adeboye O; ... (2022). Alterations in homologous recombination repair genes in prostate cancer brain metastases. Nature Communications, 13(1), p. 2400. Springer Nature 10.1038/s41467-022-30003-5
de Brot, Simone; Lothion-Roy, Jennifer; Grau-Roma, Llorenç; White, Emily; Guscetti, Franco; Rubin, Mark A.; Mongan, Nigel P (2022). Histological and immunohistochemical investigation of canine prostate carcinoma with identification of common intraductal carcinoma component. Veterinary and comparative oncology, 20(1), pp. 38-49. Wiley 10.1111/vco.12704
Fontugne, Jacqueline; Cai, Peter Y; Alnajar, Hussein; Bhinder, Bhavneet; Park, Kyung; Ye, Huihui; Beg, Shaham; Sailer, Verena; Siddiqui, Javed; Blattner-Johnson, Mirjam; Croyle, Jaclyn A; Noorzad, Zohal; Calagua, Carla; MacDonald, Theresa Y; Axcrona, Ulrika; Bogaard, Mari; Axcrona, Karol; Scherr, Douglas S; Sanda, Martin G; Johannessen, Bjarne; ... (2022). Collision tumors revealed by prospectively assessing subtype-defining molecular alterations in 904 individual prostate cancer foci. JCI insight, 7(4) JCI Insight 10.1172/jci.insight.155309
Pauli, Chantal; De Boni, Lamberto; Pauwels, Jonathan E; Chen, Yanjiang; Planas-Paz, Lara; Shaw, Reid; Emerling, Brooke M; Grandori, Carla; Hopkins, Benjamin D; Rubin, Mark A (2022). A Functional Precision Oncology Approach to Identify Treatment Strategies for Myxofibrosarcoma Patients. Molecular cancer research, 20(2), pp. 244-252. American Association for Cancer Research AACR 10.1158/1541-7786.MCR-21-0255
Ryman-Tubb, Toby; Lothion-Roy, Jennifer H; Metzler, Veronika M; Harris, Anna E; Robinson, Brian D; Rizvanov, Albert A; Jeyapalan, Jennie N; James, Victoria H; England, Gary; Rutland, Catrin S; Persson, Jenny L; Kenner, Lukas; Rubin, Mark A; Mongan, Nigel P; de Brot, Simone (2022). Comparative pathology of dog and human prostate cancer. Veterinary medicine and science, 8(1), pp. 110-120. Wiley 10.1002/vms3.642
Vogl, Ursula M.; Beer, Tomasz M.; Davis, Ian D.; Shore, Neal D.; Sweeney, Christopher J.; Ost, Piet; Attard, Gerhardt; Bossi, Alberto; de Bono, Johann; Drake, Charles G.; Efstathiou, Eleni; Fanti, Stefano; Fizazi, Karim; Halabi, Susan; James, Nicolas; Mottet, Nicolas; Padhani, Anwar R.; Roach, Mack; Rubin, Mark; Sartor, Oliver; ... (2022). Lack of consensus identifies important areas for future clinical research: Advanced Prostate Cancer Consensus Conference (APCCC) 2019 findings. European journal of cancer, 160, pp. 24-60. Elsevier 10.1016/j.ejca.2021.09.036
Mukhopadhyay, Chandrani; Yang, Chenyi; Xu, Limei; Liu, Deli; Wang, Yu; Huang, Dennis; Deonarine, Lesa Dayal; Cyrta, Joanna; Davicioni, Elai; Sboner, Andrea; Robinson, Brian D; Chinnaiyan, Arul M; Rubin, Mark A; Barbieri, Christopher E; Zhou, Pengbo (2021). G3BP1 inhibits Cul3SPOP to amplify AR signaling and promote prostate cancer. Nature Communications, 12(1), p. 6662. Springer Nature 10.1038/s41467-021-27024-x
Armstrong, Andrew J; Li, Xiaotong; Tucker, Matthew; Li, Shantao; Mu, Xinmeng Jasmine; Eng, Kenneth Wha; Sboner, Andrea; Rubin, Mark; Gerstein, Mark (2021). Molecular medicine tumor board: whole-genome sequencing to inform on personalized medicine for a man with advanced prostate cancer. Prostate cancer and prostatic diseases, 24(3), pp. 786-793. Springer Nature 10.1038/s41391-021-00324-5
El Tekle, Geniver; Bernasocchi, Tiziano; Unni, Arun M; Bertoni, Francesco; Rossi, Davide; Rubin, Mark A.; Theurillat, Jean-Philippe (2021). Co-occurrence and mutual exclusivity: what cross-cancer mutation patterns can tell us. Trends in cancer, 7(9), pp. 823-836. Elsevier 10.1016/j.trecan.2021.04.009
Papachristodoulou, Alexandros; Rodríguez-Calero, Antonio; Panja, Sukanya; Margolskee, Elizabeth; Virk, Renu K; Milner, Teresa A; Martina, Luis Pina; Kim, Jaime Y; Di Bernardo, Matteo; Williams, Alanna B; Maliza, Elvis A; Caputo, Joseph M; Haas, Christopher; Wang, Vinson; De Castro, Guarionex Joel; Wenske, Sven; Hibshoosh, Hanina; McKiernan, James M; Shen, Michael M; Rubin, Mark A; ... (2021). NKX3.1 Localization to Mitochondria Suppresses Prostate Cancer Initiation. Cancer discovery, 11(9), pp. 2316-2333. American Association for Cancer Research 10.1158/2159-8290.CD-20-1765
Cotter, Kellie A; Gallon, John; Uebersax, Nadine; Rubin, Philip; Meyer, Kate D; Piscuoglio, Salvatore; Jaffrey, Samie R; Rubin, Mark A (2021). Mapping of m6A and Its Regulatory Targets in Prostate Cancer Reveals a METTL3-Low Induction of Therapy Resistance. Molecular cancer research, 19(8), pp. 1398-1411. American Association for Cancer Research AACR 10.1158/1541-7786.MCR-21-0014
Servant, Raphaëlle; Garioni, Michele; Vlajnic, Tatjana; Blind, Melanie; Pueschel, Heike; Müller, David C; Zellweger, Tobias; Templeton, Arnoud J; Garofoli, Andrea; Maletti, Sina Laura; Piscuoglio, Salvatore; Rubin, Mark A.; Seifert, Helge; Rentsch, Cyrill A; Bubendorf, Lukas; Le Magnen, Clémentine (2021). Prostate cancer patient-derived organoids: detailed outcome from a prospective cohort of 81 clinical specimens. The journal of pathology, 254(5), pp. 543-555. Wiley 10.1002/path.5698
Ravi, Archna; Palamiuc, Lavinia; Loughran, Ryan M; Triscott, Joanna; Arora, Gurpreet K; Kumar, Avi; Tieu, Vivian; Pauli, Chantal; Reist, Matthias; Lew, Rachel J; Houlihan, Shauna L; Fellmann, Christof; Metallo, Christian; Rubin, Mark A.; Emerling, Brooke M (2021). PI5P4Ks drive metabolic homeostasis through peroxisome-mitochondria interplay. Developmental cell, 56(11), 1661-1676.e10. Elsevier 10.1016/j.devcel.2021.04.019
Sugita, Mayumi; Wilkes, David C; Bareja, Rohan; Eng, Kenneth W; Nataraj, Sarah; Jimenez-Flores, Reyna A; Yan, LunBiao; De Leon, Jeanne Pauline; Croyle, Jaclyn A; Kaner, Justin; Merugu, Swathi; Sharma, Sahil; MacDonald, Theresa Y; Noorzad, Zohal; Panchal, Palak; Pancirer, Danielle; Cheng, Shuhua; Xiang, Jenny Z; Olson, Luke; Van Besien, Koen; ... (2021). Targeting the epichaperome as an effective precision medicine approach in a novel PML-SYK fusion acute myeloid leukemia. NPJ precision oncology, 5(1), p. 44. Springer Nature 10.1038/s41698-021-00183-2
Fine, Samson W; Trpkov, Kiril; Amin, Mahul B; Algaba, Ferran; Aron, Manju; Baydar, Dilek E; Beltran, Antonio Lopez; Brimo, Fadi; Cheville, John C; Colecchia, Maurizio; Comperat, Eva; Costello, Tony; da Cunha, Isabela Werneck; Delprado, Warick; DeMarzo, Angelo M; Giannico, Giovanna A; Gordetsky, Jennifer B; Guo, Charles C; Hansel, Donna E; Hirsch, Michelle S; ... (2021). Practice patterns related to prostate cancer grading: results of a 2019 Genitourinary Pathology Society clinician survey. Urologic oncology, 39(5), 295.e1-295.e8. Elsevier 10.1016/j.urolonc.2020.08.027
Hommerding, Oliver; Allory, Yves; Argani, Pedram; Bismar, Tarek A; Bubendorf, Lukas; Canete-Portillo, Sofía; Chaux, Alcides; Chen, Ying-Bei; Cheng, Liang; Cubilla, Antonio L; Egevad, Lars; Gill, Anthony J; Grignon, David J; Hartmann, Arndt; Hes, Ondrej; Idrees, Muhammad T; Kao, Chia-Sui; Knowles, Margaret A; Looijenga, Leendert H J; Lotan, Tamara L; ... (2021). [Molecular pathology of urogenital tumors : Recommendations from the 2019 International Society of Urological Pathology (ISUP) Consensus Conference]. Der Pathologe, 42(3), pp. 310-318. Springer 10.1007/s00292-020-00888-4
Epstein, Jonathan I; Amin, Mahul B; Fine, Samson W; Algaba, Ferran; Aron, Manju; Baydar, Dilek E; Beltran, Antonio Lopez; Brimo, Fadi; Cheville, John C; Colecchia, Maurizio; Comperat, Eva; da Cunha, Isabela Werneck; Delprado, Warick; DeMarzo, Angelo M; Giannico, Giovanna A; Gordetsky, Jennifer B; Guo, Charles C; Hansel, Donna E; Hirsch, Michelle S; Huang, Jiaoti; ... (2021). The 2019 Genitourinary Pathology Society (GUPS) White Paper on Contemporary Grading of Prostate Cancer. Archives of pathology & laboratory medicine, 145(4), pp. 461-493. College of American Pathologists 10.5858/arpa.2020-0015-RA
Bolis, Marco; Bossi, Daniela; Vallerga, Arianna; Cavalli, Manuela; di Rito, Laura; Zoni, Eugenio; Mosole, Simone; Rinaldi, Andrea; Pereira Mestre, Ricardo; D'Antonio, Eugenia; Ferrari, Matteo; Stoffel, Flavio; Jermini, Fernando; Gillessen Sommer, Silke; Bubendorf, Lukas; Schraml, Peter; Moch, Holger; Spahn, Martin; Thalmann, George; Kruithof-de Julio, Marianna; ... (15 March 2021). Dynamic prostate cancer transcriptome analysis delineates the trajectory to disease progression. Research Square 10.21203/rs.3.rs-296396/v1
Karkampouna, Sofia; La Manna, Federico; Benjak, Andrej; Kiener, Mirjam; De Menna, Marta; Zoni, Eugenio; Grosjean, Joël; Klima, Irena; Garofoli, Andrea; Bolis, Marco; Vallerga, Arianna; Theurillat, Jean-Philippe; De Filippo, Maria R.; Genitsch, Vera; Keller, David; Booij, Tijmen H; Stirnimann, Christian U; Eng, Kenneth; Sboner, Andrea; Ng, Kiu Yan Charlotte; ... (2021). Patient-derived xenografts and organoids model therapy response in prostate cancer. Nature communications, 12(1), p. 1117. 10.1038/s41467-021-21300-6
Bernasocchi, Tiziano; El Tekle, Geniver; Bolis, Marco; Mutti, Azzurra; Vallerga, Arianna; Brandt, Laura P.; Spriano, Filippo; Svinkina, Tanya; Zoma, Marita; Ceserani, Valentina; Rinaldi, Anna; Janouskova, Hana; Bossi, Daniela; Cavalli, Manuela; Mosole, Simone; Geiger, Roger; Dong, Ze; Yang, Cai-Guang; Albino, Domenico; Rinaldi, Andrea; ... (2021). Dual functions of SPOP and ERG dictate androgen therapy responses in prostate cancer. Nature communications, 12(1), p. 734. Nature Publishing Group 10.1038/s41467-020-20820-x
Formaggio, Nicolò; Rubin, Mark A.; Theurillat, Jean-Philippe (2021). Loss and revival of androgen receptor signaling in advanced prostate cancer. Oncogene, 40(7), pp. 1205-1216. Springer Nature 10.1038/s41388-020-01598-0
Rubin, Mark A.; Bristow, Robert G; Thienger, Phillip D.; Dive, Caroline; Imielinski, Marcin (2020). Impact of Lineage Plasticity to and from a Neuroendocrine Phenotype on Progression and Response in Prostate and Lung Cancers. Molecular cell, 80(4), pp. 562-577. Cell Press 10.1016/j.molcel.2020.10.033
Cyrta, Joanna; Augspach, Anke; De Filippo, Maria Rosaria; Prandi, Davide; Thienger, Phillip; Benelli, Matteo; Cooley, Victoria; Bareja, Rohan; Wilkes, David; Chae, Sung-Suk; Cavaliere, Paola; Dephoure, Noah; Uldry, Anne-Christine; Braga Lagache, Sophie; Roma, Luca; Cohen, Sandra; Jaquet, Muriel; Brandt, Laura P.; Alshalalfa, Mohammed; Puca, Loredana; ... (2020). Role of specialized composition of SWI/SNF complexes in prostate cancer lineage plasticity. Nature Communications, 11(1), p. 5549. Springer Nature 10.1038/s41467-020-19328-1
Thienger, Phillip; Rubin, Mark A. (2020). SETting Up for Epigenetic Regulation of Advanced Prostate Cancer. Cancer cell, 38(3), pp. 309-311. Cell Press 10.1016/j.ccell.2020.08.009
Lotan, Tamara L; Tomlins, Scott A; Bismar, Tarek A; Van der Kwast, Theodorus H; Grignon, David; Egevad, Lars; Kristiansen, Glen; Pritchard, Colin C; Rubin, Mark A; Bubendorf, Lukas (2020). Report From the International Society of Urological Pathology (ISUP) Consultation Conference on Molecular Pathology of Urogenital Cancers. I. Molecular Biomarkers in Prostate Cancer. The American journal of surgical pathology, 44(7), e15-e29. Wolters Kluwer Health 10.1097/PAS.0000000000001450
Auguste, Aurélie; Blanc-Durand, Félix; Deloger, Marc; Le Formal, Audrey; Bareja, Rohan; Wilkes, David C; Richon, Catherine; Brunn, Béatrice; Caron, Olivier; Devouassoux-Shisheboran, Mojgan; Gouy, Sébastien; Morice, Philippe; Bentivegna, Enrica; Sboner, Andrea; Elemento, Olivier; Rubin, Mark A; Pautier, Patricia; Genestie, Catherine; Cyrta, Joanna and Leary, Alexandra (2020). Small Cell Carcinoma of the Ovary, Hypercalcemic Type (SCCOHT) beyond SMARCA4 Mutations: A Comprehensive Genomic Analysis. Cells, 9(6) MDPI 10.3390/cells9061496
Pisapia, David J; Ohara, Kentaro; Bareja, Rohan; Wilkes, David C; Hissong, Erika; Croyle, Jaclyn A; Kim, Joon-Hyung; Saab, Jad; MacDonald, Theresa Y; Beg, Shaham; O'Reilly, Catherine; Kudman, Sarah; Rubin, Mark A; Elemento, Olivier; Sboner, Andrea; Greenfield, Jeffrey; Mosquera, Juan Miguel (2020). Fusions involving BCOR and CREBBP are rare events in infiltrating glioma. Acta neuropathologica communications, 8(1), p. 80. BioMed Central 10.1186/s40478-020-00951-4
Rubin, Mark; Largiadèr, Carlo; Staub, Timo (2020). Das Bern Center for Precision Medicine (BCPM). Schweizer Krebsbulletin / Bulletin suisse du cancer(01/20), pp. 48-50. Bern: Istituto oncologico della Svizzera Italiana
Reyna, Matthew A; Haan, David; Paczkowska, Marta; Verbeke, Lieven P C; Vazquez, Miguel; Kahraman, Abdullah; Pulido-Tamayo, Sergio; Barenboim, Jonathan; Wadi, Lina; Dhingra, Priyanka; Shrestha, Raunak; Getz, Gad; Lawrence, Michael S; Pedersen, Jakob Skou; Rubin, Mark Andrew; Wheeler, David A; Brunak, Søren; Izarzugaza, Jose M G; Khurana, Ekta; Marchal, Kathleen; ... (2020). Pathway and network analysis of more than 2500 whole cancer genomes. Nature communications, 11(1), p. 729. Nature Publishing Group 10.1038/s41467-020-14367-0
Rheinbay, Esther; Nielsen, Morten Muhlig; Abascal, Federico; Wala, Jeremiah A; Shapira, Ofer; Tiao, Grace; Hornshøj, Henrik; Hess, Julian M; Juul, Randi Istrup; Lin, Ziao; Feuerbach, Lars; Sabarinathan, Radhakrishnan; Madsen, Tobias; Kim, Jaegil; Mularoni, Loris; Shuai, Shimin; Lanzos, Andrés; Herrmann, Carl; Maruvka, Yosef E; Shen, Ciyue; ... (2020). Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. Nature, 578(7793), pp. 102-111. Springer Nature 10.1038/s41586-020-1965-x
Arriaga, Juan M.; Panja, Sukanya; Alshalalfa, Mohammed; Zhao, Junfei; Zou, Min; Giacobbe, Arianna; Madubata, Chioma J.; Kim, Jaime Yeji; Rodriguez, Antonio; Coleman, Ilsa; Virk, Renu K.; Hibshoosh, Hanina; Ertunc, Onur; Ozbek, Büşra; Fountain, Julia; Jeffrey Karnes, R.; Luo, Jun; Antonarakis, Emmanuel S.; Nelson, Peter S.; Feng, Felix Y.; ... (2020). A MYC and RAS co-activation signature in localized prostate cancer drives bone metastasis and castration resistance. Nature ancer, 1(11), pp. 1082-1096. Springer Nature 10.1038/s43018-020-00125-0
Beltran, Himisha; Hruszkewycz, Andrew; Scher, Howard I; Hildesheim, Jeffrey; Isaacs, Jennifer; Yu, Evan Y; Kelly, Kathleen; Lin, Daniel; Dicker, Adam; Arnold, Julia; Hecht, Toby; Wicha, Max; Sears, Rosalie; Rowley, David; White, Richard; Gulley, James L; Lee, John; Diaz Meco, Maria; Small, Eric J; Shen, Michael; ... (2019). The Role of Lineage Plasticity in Prostate Cancer Therapy Resistance. Clinical cancer research, 25(23), pp. 6916-6924. American Association for Cancer Research 10.1158/1078-0432.CCR-19-1423
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