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Vazquez Pianzola, Maria Paula; Adam, Jacqueline; Haldemann, Dominique; Hain, Daniel; Suter, Beat; Urlaub, Henning (2014). Clathrin heavy chain plays multiple roles in polarizing the Drosophila oocyte downstream of Bic-D. Development, 141(9), pp. 1915-1926. Company of Biologists Limited 10.1242/dev.099432
Aeschlimann, Salome; Kalichava, Ana; Schimanski, Bernd; Berger, Bianca Manuela; Jetishi, Clirim; Stettler, Philip; Ochsenreiter, Torsten; Schneider, André (2022). Single p197 molecules of the mitochondrial genome segregation system of Trypanosoma brucei determine the distance between basal body and outer membrane. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 119(40), e2204294119. National Academy of Sciences NAS 10.1073/pnas.2204294119
De Niz, Mariana; Caldelari, Reto; Kaiser, Gesine; Zuber, Benoît; Heo, Won Do; Heussler, Volker T.; Agop-Nersesian, Carolina (2021). Hijacking of the host cell Golgi by Plasmodium berghei liver stage parasites. Journal of cell science, 134(10) Company of Biologists Limited 10.1242/jcs.252213
Agop Nersesian, Carolina; De Niz Hidalgo, Mariana Isabel; Niklaus, Livia; Prado, Monica; Eickel, Nina; Heussler, Volker (2017). Shedding of host autophagic proteins from the parasitophorous vacuolar membrane of Plasmodium berghei. Scientific Reports, 7(1), p. 2191. Nature Publishing Group 10.1038/s41598-017-02156-7
Prado, Monica; Eickel, Nina; De Niz Hidalgo, Mariana Isabel; Heitmann, Anna; Agop Nersesian, Carolina; Wacker, Rahel Corina; Schmuckli-Maurer, Jacqueline; Caldelari, Reto; Janse, Chris J; Khan, Shahid M; May, Jürgen; Meyer, Christian G; Heussler, Volker (2015). Long-term live imaging reveals cytosolic immune responses of host hepatocytes against Plasmodium infection and parasite escape mechanisms. Autophagy, 11(9), pp. 1561-1579. Landes Bioscience 10.1080/15548627.2015.1067361
Stefanov, Bozhidar-Adrian; Ajuh, Elvis; Allen, Sarah; Nowacki, Mariusz (2024). Eukaryotic release factor 1 from Euplotes promotes frameshifting at premature stop codons in human cells. iScience, 27(4) Elsevier 10.1016/j.isci.2024.109413
Stefanov, Bozhidar-Adrian; Ajuh, Elvis; Allen, Sarah; Nowacki, Mariusz (2024). Eukaryotic release factor 1 from Euplotes promotes frameshifting at premature stop codons in human cells. iScience, 27(4) Elsevier 10.1016/j.isci.2024.109413
Allen, Sarah E.; Nowacki, Mariusz (2020). Roles of non-coding RNAs in ciliate genome architecture. Journal of molecular biology, 432(15), pp. 4186-4198. Elsevier 10.1016/j.jmb.2019.12.042
Allen, Sarah Elizabeth; Hug, Iris Sandra; Pabian, Sylwia Weronika; Rzeszutek, Iwona Maria; Höhener, Cristina; Nowacki, Mariusz (2017). Circular Concatemers of Ultra-Short DNA Segments Produce Regulatory RNAs. Cell, 168(6), 990-999.e7. Cell Press 10.1016/j.cell.2017.02.020
Allen, Sarah Elizabeth; Nowacki, Mariusz (2017). Necessity Is the Mother of Invention: Ciliates, Transposons, and Transgenerational Inheritance. Trends in genetics, 33(3), pp. 197-207. Elsevier Current Trends 10.1016/j.tig.2017.01.005
Allen, Sarah Elizabeth; Nowacki, Mariusz (2016). RNA-Guided Genome Editing. In: Witzany, Guenther; Nowacki, Mariusz (eds.) Biocommunication of Ciliates (pp. 35-50). Cham: Springer 10.1007/978-3-319-32211-7_3
Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Draft genome of Trypanosoma b. brucei EATRO1125 (AnTaR1 serodeme) strain [Dataset]. In: EATRO1125 (AnTaR1 serodeme) pseudo chromosomes.
Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Trypanosoma brucei EATRO1125 draft genome assembly (Contigs) [Dataset]. In: Trypanosoma brucei (EATRO1125) genome contigs.
Amodeo, Simona; Bregy, Irina; Ochsenreiter, Torsten (2023). Mitochondrial genome maintenance - the kinetoplast story. FEMS microbiology reviews, 47(6) Blackwell Publishing Ltd 10.1093/femsre/fuac047
Amodeo, Simona; Bregy, Irina; Hoffmann, Anneliese; Fradera-Sola, Albert; Kern, Mara; Baudouin, Hélène; Zuber, Benoît; Butter, Falk; Ochsenreiter, Torsten (2023). Characterization of two novel proteins involved in mitochondrial DNA anchoring in Trypanosoma brucei. PLoS pathogens, 19(7), e1011486. Public Library of Science 10.1371/journal.ppat.1011486
Amodeo, Simona; Kalichava, Ana; Fradera-Sola, Albert; Bertiaux-Lequoy, Eloïse; Guichard, Paul; Butter, Falk; Ochsenreiter, Torsten (2021). Characterization of the novel mitochondrial genome segregation factor TAP110 in Trypanosoma brucei. Journal of cell science, 134(5) Company of Biologists Limited 10.1242/jcs.254300
Jojic, Borka; Amodeo, Simona; Ochsenreiter, Torsten (2018). The translationally controlled tumor protein TCTP is involved in cell cycle progression and heat stress response in the bloodstream form of Trypanosoma brucei. Microbial cell, 5(10), pp. 460-468. Shared Science Publishers OG 10.15698/mic2018.10.652
Jojic, Borka; Amodeo, Simona; Bregy, Irina; Ochsenreiter, Torsten (2018). Distinct 3′ UTRs regulate the life-cycle-specific expression of two TCTP paralogs in Trypanosoma brucei. Journal of cell biology, 131(9) Rockefeller Institute Press 10.1242/jcs.206417
Amodeo, Simona; Jakob, Martin; Ochsenreiter, Torsten (2018). Characterization of the novel mitochondrial genome replication factor MiRF172 in Trypanosoma brucei. Journal of cell science, 131(8) Company of Biologists Limited 10.1242/jcs.211730
Hoffmann, Anneliese; Käser, Sandro; Jakob, Martin; Amodeo, Simona; Peitsch, Camille Françoise; Týč, Jiří; Vaughan, Sue; Zuber, Benoît; Schneider, André; Ochsenreiter, Torsten (2018). Molecular model of the mitochondrial genome segregation machinery in Trypanosoma brucei. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 115(8), E1809-E1818. National Academy of Sciences NAS 10.1073/pnas.1716582115
Jakob, Martin; Hoffmann, Anneliese; Amodeo, Simona; Peitsch, Camille; Zuber, Benoît; Ochsenreiter, Torsten (2016). Mitochondrial growth during the cell cycle of Trypanosoma brucei bloodstream forms. Scientific Reports, 6(36565), p. 36565. Nature Publishing Group 10.1038/srep36565
Andrieu, Thomas; Mani, Orlando; Göpfert, Christine; Bertolini, Reto; Güttinger, Andreas; Setoud, Raschid; Uh, Kayla Y; Baker, Michael E; Frey, Felix J; Frey, Brigitte M (2015). Detection and functional portrayal of a novel class of dihydrotestosterone derived selective progesterone receptor modulators (SPRM). Journal of steroid biochemistry and molecular biology, 147, pp. 111-123. Elsevier 10.1016/j.jsbmb.2014.12.009
Ignarski, Michael; Singh, Aditi; Swart, Estienne Carl; Arambasic, Miroslav; Sandoval, Pamela Yohanna de Lourdes; Nowacki, Mariusz (2014). Paramecium tetraurelia chromatin assembly factor-1-like protein PtCAF-1 is involved in RNA-mediated control of DNA elimination. Nucleic acids research, 42(19), pp. 11952-11964. Information Retrieval Ltd. 10.1093/nar/gku874
Sandoval, Pamela Yohanna de Lourdes; Swart, Estienne Carl; Arambasic, Miroslav; Nowacki, Mariusz (2014). Functional Diversification of Dicer-like Proteins and Small RNAs Required for Genome Sculpting. Developmental cell, 28(2), pp. 174-188. Cell Press 10.1016/j.devcel.2013.12.010
Swart, Estienne Carl; Wilkes, Cyril Denby; Sandoval, Pamela Yohanna de Lourdes; Arambasic, Miroslav; Sperling, Linda; Nowacki, Mariusz (2014). Genome-wide analysis of genetic and epigenetic control of programmed DNA deletion. Nucleic acids research, 42(14), pp. 8970-8983. Oxford University Press 10.1093/nar/gku619
Arambasic, Miroslav; Sandoval, Pamela Yohanna de Lourdes; Höhener, Cristina; Singh, Aditi; Swart, Estienne Carl; Nowacki, Mariusz (2014). Pdsg1 and Pdsg2, novel proteins involved in developmental genome remodelling in Paramecium. PLoS ONE, 9(11), e112899. Public Library of Science 10.1371/journal.pone.0112899
Asparuhova, Maria B.; Barde, Isabelle; Trono, Didier; Schranz, Karin; Schümperli, Daniel (2008). Development and characterization of a triple combination gene therapy vector inhibiting HIV-1 multiplication. Journal of gene medicine, 10(10), pp. 1059-1070. Chichester: Wiley 10.1002/jgm.1238
Atchou, Kodzo; Berger, Bianca Manuela; Heussler, Volker; Ochsenreiter, Torsten (2023). Pre-gelation staining expansion microscopy (PS-ExM) for visualisation of the Plasmodium liver stage. Journal of cell science, 136(22) Company of Biologists 10.1242/jcs.261377
Jetishi, Clirim; Balmer, Erina A; Berger, Bianca M; Faso, Carmen; Ochsenreiter, Torsten (2024). Expansion of metabolically labelled endocytic organelles and cytoskeletal cell structures in Giardia lamblia using optimised U-ExM protocols. Microbial cell, 11, pp. 198-206. Shared Science Publishers OG 10.15698/mic2024.06.825
Balmer, Erina A; Wirdnam, Corina D; Faso, Carmen (2023). A core UPS molecular complement implicates unique endocytic compartments at the parasite-host interface in Giardia lamblia. Virulence, 14(1), p. 2174288. Taylor & Francis 10.1080/21505594.2023.2174288
Pipaliya, Shweta V.; Santos, Rui; Salas-Leiva, Dayana; Balmer, Erina A.; Wirdnam, Corina D.; Roger, Andrew J.; Hehl, Adrian B.; Faso, Carmen; Dacks, Joel B. (2021). Unexpected organellar locations of ESCRT machinery in Giardia intestinalis and complex evolutionary dynamics spanning the transition to parasitism in the lineage Fornicata. BMC biology, 19(1), p. 167. BioMed Central 10.1186/s12915-021-01077-2
Balmer, Erina A.; Faso, Carmen (2021). The Road Less Traveled? Unconventional Protein Secretion at Parasite–Host Interfaces. Frontiers in cell and developmental biology, 9, p. 662711. Frontiers 10.3389/fcell.2021.662711
Bao, Mengjing; Dörig, Ruth E; Vazquez-Pianzola, Maria Paula; Beuchle, Dirk; Suter, Beat (2023). Differential modification of the C-terminal tails of different α-tubulins and their importance for microtubule function in vivo. eLife, 12 eLife Sciences Publications 10.7554/eLife.87125
Amodeo, Simona; Bregy, Irina; Hoffmann, Anneliese; Fradera-Sola, Albert; Kern, Mara; Baudouin, Hélène; Zuber, Benoît; Butter, Falk; Ochsenreiter, Torsten (2023). Characterization of two novel proteins involved in mitochondrial DNA anchoring in Trypanosoma brucei. PLoS pathogens, 19(7), e1011486. Public Library of Science 10.1371/journal.ppat.1011486
Baudouin, Hélène Clémentine Margareta; Pfeiffer, Laura; Ochsenreiter, Torsten (2020). A comparison of three approaches for the discovery of novel tripartite attachment complex proteins in Trypanosoma brucei. PLoS neglected tropical diseases, 14(9), e0008568. Public Library of Science 10.1371/journal.pntd.0008568
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Zhang, Fukai; Bechara, Sebastian; Nowacki, Mariusz (2024). Structural maintenance of chromosomes (SMC) proteins are required for DNA elimination in Paramecium. Life science alliance, 7(2) EMBO Press 10.26508/lsa.202302281
Bechara, Sebastian; Kabbani, Lyna; Maurer Alcala, Xyrus; Nowacki, Mariusz (2022). Identification of novel, functional long non-coding RNAs involved in programmed, large scale genome rearrangements. RNA, 28(8), pp. 1110-1127. Cold Spring Harbor Laboratory Press 10.1261/rna.079134.122
Kudira, Ramesh; Malinka, Thomas; Kohler, Andreas; Dosch, Michel; Gomez de Agüero Tamargo, Maria de la Mercedes; Melin, Nicolas; Haegele, S; Starlinger, P; Maharjan, Niran; Saxena, Smita; Keogh, Adrian; Keogh-Stroka, Deborah M.; Candinas, Daniel; Beldi, Guido (2016). P2X1 regulated IL-22 secretion by innate lymphoid cells is required for efficient liver regeneration. Hepatology, 63(6), pp. 2004-2017. Wiley Interscience 10.1002/hep.28492
Kudira, Ramesh; Malinka, Thomas; Kohler, Andreas; Dosch, Michel; Gomez de Agüero Tamargo, Maria de la Mercedes; Melin, Nicolas; Haegele, S; Starlinger, P; Maharjan, Niran; Saxena, Smita; Keogh, Adrian; Keogh-Stroka, Deborah M.; Candinas, Daniel; Beldi, Guido (2016). P2X1 regulated IL-22 secretion by innate lymphoid cells is required for efficient liver regeneration (Unpublished). In: Keystone Symposium. Vancouver. 29.01.2016.
Zhou, Bin; Tran, Thi Nhu Thao; Hoffmann, Donata; Taddeo, Adriano; Ebert, Nadine; Labroussaa, Fabien; Pohlmann, Anne; King, Jacqueline; Steiner, Silvio; Kelly, Jenna N.; Portmann, Jasmine; Halwe, Nico Joel; Ulrich, Lorenz; Trüeb, Bettina Salome; Fan, Xiaoyu; Hoffmann, Bernd; Wang, Li; Thomann, Lisa; Lin, Xudong; Stalder, Hanspeter; ... (2021). SARS-CoV-2 spike D614G change enhances replication and transmission. Nature, 592(7852), pp. 122-127. Springer Nature 10.1038/s41586-021-03361-1
Knüsel, Sebastian; Jenni, Aurelio; Benninger, Mattias; Bütikofer, Peter; Roditi, Isabel (2022). Persistence of Trypanosoma brucei as early procyclic forms and social motility are dependent on glycosylphosphatidylinositol transamidase. Molecular microbiology, 117(4), pp. 802-817. Wiley 10.1111/mmi.14873
Jenni, Aurelio; Knüsel, Sebastian; Nagar, Rupa; Benninger, Mattias; Häner, Robert; Ferguson, Michael A J; Roditi, Isabel; Menon, Anant K; Bütikofer, Peter (2021). Elimination of GPI2 suppresses glycosylphosphatidylinositol GlcNAc transferase activity and alters GPI glycan modification in Trypanosoma brucei. The journal of biological chemistry, 297(2), p. 100977. American Society for Biochemistry and Molecular Biology 10.1016/j.jbc.2021.100977
Atchou, Kodzo; Berger, Bianca Manuela; Heussler, Volker; Ochsenreiter, Torsten (2023). Pre-gelation staining expansion microscopy (PS-ExM) for visualisation of the Plasmodium liver stage. Journal of cell science, 136(22) Company of Biologists 10.1242/jcs.261377
Aeschlimann, Salome; Kalichava, Ana; Schimanski, Bernd; Berger, Bianca Manuela; Jetishi, Clirim; Stettler, Philip; Ochsenreiter, Torsten; Schneider, André (2022). Single p197 molecules of the mitochondrial genome segregation system of Trypanosoma brucei determine the distance between basal body and outer membrane. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 119(40), e2204294119. National Academy of Sciences NAS 10.1073/pnas.2204294119
Rashpa, Ravish; Vazquez Pianzola, Maria Paula; Colombo, Martino; Hernandez, Greco; Beuchle, Dirk; Berger, Fabienne Chantal; Peischl, Stephan; Bruggmann, Rémy; Suter, Beat (2017). Cbp80 is needed for the expression of piRNA components and piRNAs. PLoS ONE, 12(7), e0181743. Public Library of Science 10.1371/journal.pone.0181743
Andrieu, Thomas; Mani, Orlando; Göpfert, Christine; Bertolini, Reto; Güttinger, Andreas; Setoud, Raschid; Uh, Kayla Y; Baker, Michael E; Frey, Felix J; Frey, Brigitte M (2015). Detection and functional portrayal of a novel class of dihydrotestosterone derived selective progesterone receptor modulators (SPRM). Journal of steroid biochemistry and molecular biology, 147, pp. 111-123. Elsevier 10.1016/j.jsbmb.2014.12.009
Jejina, Aleksandra; Ayala, Yeniffer; Beuchle, Dirk; Höhener, Thomas; Dörig, Ruth E; Vazquez-Pianzola, Paula; Hernández, Greco; Suter, Beat (2024). Role of BicDR in bristle shaft construction and support of BicD functions. Journal of cell science, 137(2) Company of Biologists 10.1242/jcs.261408
Bao, Mengjing; Dörig, Ruth E; Vazquez-Pianzola, Maria Paula; Beuchle, Dirk; Suter, Beat (2023). Differential modification of the C-terminal tails of different α-tubulins and their importance for microtubule function in vivo. eLife, 12 eLife Sciences Publications 10.7554/eLife.87125
Vazquez-Pianzola, Paula; Beuchle, Dirk; Saro, Gabriella; Hernández, Greco; Maldonado, Giovanna; Brunßen, Dominique; Meister, Peter; Suter, Beat (2022). Female meiosis II and pronuclear fusion require the microtubule transport factor Bicaudal-D. Development, 149(13) The Company of Biologists 10.1242/dev.199944
Vazquez Pianzola, Maria Paula; Schaller, Bogdan; Colombo, Martino; Beuchle, Dirk; Neuenschwander, Samuel; Marcil, Anne; Bruggmann, Rémy; Suter, Beat (2017). The mRNA transportome of the BicD / Egl transport machinery. RNA biology, 14(1), pp. 73-89. Taylor and Francis 10.1080/15476286.2016.1251542
Rashpa, Ravish; Vazquez Pianzola, Maria Paula; Colombo, Martino; Hernandez, Greco; Beuchle, Dirk; Berger, Fabienne Chantal; Peischl, Stephan; Bruggmann, Rémy; Suter, Beat (2017). Cbp80 is needed for the expression of piRNA components and piRNAs. PLoS ONE, 12(7), e0181743. Public Library of Science 10.1371/journal.pone.0181743
Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Draft genome of Trypanosoma b. brucei EATRO1125 (AnTaR1 serodeme) strain [Dataset]. In: EATRO1125 (AnTaR1 serodeme) pseudo chromosomes.
Naguleswaran, Arunasalam; Alves Fernandes, Paula; Bevkal Subramanyaswamy, Shubha; Rehmann, Ruth; Nicholson, Pamela; Roditi, Isabel (2021). Trypanosoma brucei EATRO1125 draft genome assembly (Contigs) [Dataset]. In: Trypanosoma brucei (EATRO1125) genome contigs.
Bevkal, Shubha; Naguleswaran, Arunasalam; Rehmann, Ruth; Kaiser, Marcel; Heller, Manfred; Roditi, Isabel (2021). An Alba-domain protein required for proteome remodelling during trypanosome differentiation and host transition. PLoS pathogens, 17(1), e1009239. Public Library of Science 10.1371/journal.ppat.1009239
Beyeler, Raphael; Jordan, Melanie; Dorner, Lilian; He, Buyuan; Cyrklaff, Marek; Roques, Magali; Stanway, Rebecca; Frischknecht, Friedrich; Heussler, Volker (2024). Putative prefoldin complex subunit 5 of Plasmodium berghei is crucial for microtubule formation and parasite development in the mosquito. Molecular microbiology, 121(3), pp. 481-496. Blackwell Science 10.1111/mmi.15196
Roques, Magali; Bindschedler, Annina; Beyeler, Raphael; Heussler, Volker T (2023). Same, same but different: Exploring Plasmodium cell division during liver stage development. PLoS pathogens, 19(3), e1011210. Public Library of Science 10.1371/journal.ppat.1011210
Bischerour, Julien; Bhullar, Simran; Denby Wilkes, Cyril; Régnier, Vinciane; Mathy, Nathalie; Dubois, Emeline; Singh, Aditi; Swart, Estienne Carl; Arnaiz, Olivier; Sperling, Linda; Nowacki, Mariusz; Bétermier, Mireille (2018). Six domesticated PiggyBac transposases together carry out programmed DNA elimination in . eLife, 7 eLife Sciences Publications 10.7554/eLife.37927
Bhullar, Simran; Denby Wilkes, Cyril; Arnaiz, Olivier; Nowacki, Mariusz; Sperling, Linda; Meyer, Eric (2018). A mating-type mutagenesis screen identifies a zinc-finger protein required for specific DNA excision events in Paramecium. Nucleic acids research, 46(18), pp. 9550-9562. Oxford University Press 10.1093/nar/gky772
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Roques, Magali; Bindschedler, Annina; Beyeler, Raphael; Heussler, Volker T (2023). Same, same but different: Exploring Plasmodium cell division during liver stage development. PLoS pathogens, 19(3), e1011210. Public Library of Science 10.1371/journal.ppat.1011210
Romano, Patricia Silvia; Akematsu, Takahiko; Besteiro, Sébastien; Bindschedler, Annina; Carruthers, Vern B; Chahine, Zeinab; Coppens, Isabelle; Descoteaux, Albert; Alberto Duque, Thabata Lopes; He, Cynthia Y; Heussler, Volker; Le Roch, Karine G; Li, Feng-Jun; de Menezes, Juliana Perrone Bezerra; Menna-Barreto, Rubem Figueiredo Sadok; Mottram, Jeremy C; Schmuckli-Maurer, Jacqueline; Turk, Boris; Tavares Veras, Patricia Sampaio; Salassa, Betiana Nebai; ... (2023). Autophagy in protists and their hosts: When, how and why? Autophagy reports, 2(1) Taylor & Francis 10.1080/27694127.2022.2149211
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Miozzo, Federico; Valencia-Alarcón, Eva P; Stickley, Luca; Majcin Dorcikova, Michaëla; Petrelli, Francesco; Tas, Damla; Loncle, Nicolas; Nikonenko, Irina; Bou Dib, Peter; Nagoshi, Emi (2022). Maintenance of mitochondrial integrity in midbrain dopaminergic neurons governed by a conserved developmental transcription factor. Nature Communications, 13(1), p. 1426. Springer Nature 10.1038/s41467-022-29075-0
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Brauchle, Michael Anton; Bilican, Adem; Eyer, Claudia; Bailly, X; Martinez, P; Ladurner, P; Bruggmann, Rémy; Sprecher, SG (2018). Xenacoelomorpha Survey Reveals That All 11 Animal Homeobox Gene Classes Were Present in the First Bilaterians. Genome biology and evolution, 10(9), pp. 2205-2217. Oxford University Press 10.1093/gbe/evy170
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Eickel, Nina; Kaiser, Gesine; Prado, Monica; Burda, Paul-Christian; Roelli, Matthias; Stanway, Rebecca R.; Heussler, Volker (2013). Features of autophagic cell death in Plasmodium liver-stage parasites. Autophagy, 9(4), pp. 568-580. Landes Bioscience 10.4161/auto.23689
Wierk, Jannika Katharina; Langbehn, Annette; Kamper, Maria; Richter, Stefanie; Burda, Paul-Christian; Heussler, Volker; Deschermeier, Christina (2013). Plasmodium berghei MAPK1 displays differential and dynamic subcellular localizations during liver stage development. PLoS ONE, 8(3), e59755. Public Library of Science 10.1371/journal.pone.0059755
Tartz, Susanne; Deschermeier, Christina; Retzlaff, Silke; Heussler, Volker; Sebo, Peter; Fleischer, Bernhard; Jacobs, Thomas (2013). Plasmodium berghei sporozoite challenge of vaccinated BALB/c mice leads to the induction of humoral immunity and improved function of CD8(+) memory T cells. European journal of immunology, 43(3), pp. 693-704. Wiley-VCH 10.1002/eji.201142262
Stanway, Rebecca R.; Schmuckli-Maurer, Jacqueline; Heussler, Volker (2013). Analysis of liver stage development in and merozoite release from hepatocytes. In: Ménard, Robert (ed.) Malaria, Methods and Protocols. Methods in Molecular Biology: Vol. 923 (pp. 411-427). Humana Press 10.1007/978-1-62703-026-7_29
Graewe, S.; Stanway, R. R.; Rennenberg, A.; Heussler, Volker (2012). Chronicle of a death foretold: Plasmodium liver stage parasites decide on the fate of the host cell. FEMS microbiology reviews, 36(1), pp. 111-130. Malden, Mass.: Blackwell Publishing Ltd 10.1111/j.1574-6976.2011.00297.x
Kolbaum, J; Tartz, S; Hartmann, W; Helm, S; Nagel, A; Heussler, Volker; Sebo, P; Fleischer, B; Jacobs, T; Breloer, M (2012). Nematode-induced interference with the anti-Plasmodium CD8+ T-cell response can be overcome by optimizing antigen administration. European journal of immunology, 42(4), pp. 890-900. Weinheim: Wiley-VCH 10.1002/eji.201141955
Kono, M; Herrmann, S; Loughran, NB; Cabera, A; Engelberg, K; Lehmann, C; Sinha, D; Prinz, B; Ruch, U; Heussler, Volker; Spielmann, T; Parkinson, J; Gilberger, TW (2012). Evolution and Architecture of the Inner Membrane Complex in Asexual and Sexual Stages of the Malaria Parasite. Molecular Biology and Evolution, 29(9), pp. 2113-2132. Oxford: Oxford University Press 10.1093/molbev/mss081
Deschermeier, C.; Hecht, L.S.; Bach, F.; Rützel, K.; Stanway, R.R.; Nagel, A.; Seeber, F.; Heussler, Volker (2012). Mitochondrial lipoic acid scavenging is essential for Plasmodium berghei liver stage development. Cellular microbiology, 14(3), pp. 416-430. Oxford: Blackwell 10.1111/j.1462-5822.2011.01729.x
Amino, R.; Bassat, Q.; Baum, J.; Billker, O.; Bogyo, M.; Bousema, T.; Christophides, G.; Deitsch, K.; Dinglasan, R.; Djimde, A.; Duraisingh, M.; Dzinjalamala, F.; Happi, C.; Heussler, Volker; Kramarik, J.; de Koning-Ward, T.; Lacerda, M.; Laufer, M.; Lim, P.; Llinas, M.; ... (2011). A research agenda for malaria eradication: basic science and enabling technologies. PLoS medicine, 8(1), e1000399. San Francisco, Calif.: Public Library of Science 10.1371/journal.pmed.1000399
Graewe, Stefanie; Rankin, Kathleen E.; Lehmann, Christine; Deschermeier, Christina; Hecht, Leonie; Froehlke, Ulrike; Stanway, Rebecca R.; Heussler, Volker (2011). Hostile takeover by Plasmodium: reorganization of parasite and host cell membranes during liver stage egress. PLoS pathogens, 7(9), e1002224. San Francisco, Calif.: Public Library of Science 10.1371/journal.ppat.1002224
Hansen, G.; Heitmann, A.; Witt, T.; Li, H.; Jiang, H.; Shen, X.; Heussler, Volker; Rennenberg, A.; Hilgenfeld, R. (2011). Structural basis for the regulation of cysteine-protease activity by a new class of protease inhibitors in Plasmodium. Structure, 19(7), pp. 919-929. Cambridge, Mass.: Cell Press 10.1016/j.str.2011.03.025
Hansen, G.; Schwarzloh, B.; Rennenberg, A.; Heussler, Volker; Hilgenfeld, R. (2011). The macromolecular complex of ICP and falcipain-2 from Plasmodium: preparation, crystallization and preliminary X-ray diffraction analysis. Acta crystallographica. Section F - Structural biology and crystallization communications online, 67(Pt 11), pp. 1406-10. Oxford: Wiley-Blackwell 10.1107/S1744309111034592
Martin-Jaular, L.; Ferrer, M.; Calvo, M.; Rosanas-Urgell, A.; Kalko, S.; Graewe, S.; Soria, G.; Cortadellas, N.; Ordi, J.; Planas, A.; Burns, J.; Heussler, Volker; del Portillo, H. A. (2011). Strain-specific spleen remodelling in Plasmodium yoelii infections in Balb/c mice facilitates adherence and spleen macrophage-clearance escape. Cellular microbiology, 13(1), pp. 109-122. Oxford: Blackwell 10.1111/j.1462-5822.2010.01523.x
Sicard, A.; Semblat, J. P.; Doerig, C.; Hamelin, R.; Moniatte, M.; Dorin-Semblat, D.; Spicer, J. A.; Srivastava, A.; Retzlaff, S.; Heussler, Volker; Waters, A. P.; Doerig, C. (2011). Activation of a PAK-MEK signalling pathway in malaria parasite-infected erythrocytes. Cellular microbiology, 13(6), pp. 836-845. Oxford: Blackwell 10.1111/j.1462-5822.2011.01582.x
Stanway, R. R.; Mueller, N.; Zobiak, B.; Graewe, S.; Froehlke, U.; Zessin, P. J.; Aepfelbacher, M.; Heussler, Volker (2011). Organelle segregation into Plasmodium liver stage merozoites. Cellular microbiology, 13(11), pp. 1768-82. Oxford: Blackwell 10.1111/j.1462-5822.2011.01657.x
Putrianti, Elyzana D; Schmidt-Christensen, Anja; Arnold, Iris; Heussler, Volker; Matuschewski, Kai; Silvie, Olivier (2010). The Plasmodium serine-type SERA proteases display distinct expression patterns and non-essential in vivo roles during life cycle progression of the malaria parasite. Cellular microbiology, 12(6), pp. 725-739. Blackwell 10.1111/j.1462-5822.2009.01419.x
Rankin, Kathleen E; Graewe, Stefanie; Heussler, Volker; Stanway, Rebecca R (2010). Imaging liver-stage malaria parasites. Cellular microbiology, 12(5), pp. 569-579. Blackwell 10.1111/j.1462-5822.2010.01454.x
Rennenberg, Annika; Lehmann, Christine; Heitmann, Anna; Witt, Tina; Hansen, Guido; Nagarajan, Krishna; Deschermeier, Christina; Turk, Vito; Hilgenfeld, Rolf; Heussler, Volker (2010). Exoerythrocytic Plasmodium Parasites Secrete a Cysteine Protease Inhibitor Involved in Sporozoite Invasion and Capable of Blocking Cell Death of Host Hepatocytes. PLoS pathogens, 6(3), e1000825. Public Library of Science 10.1371/journal.ppat.1000825
Helm, Susanne; Lehmann, Christine; Nagel, Andreas; Stanway, Rebecca R; Horstmann, Sebastian; Llinas, Manuel; Heussler, Volker (2010). Identification and characterization of a liver stage-specific promoter region of the malaria parasite Plasmodium. PLoS ONE, 5(10), e13653. Public Library of Science 10.1371/journal.pone.0013653
Doerig, C; Baker, D; Billker, O; Blackman, M J; Chitnis, C; Dhar Kumar, S; Heussler, Volker; Holder, A A; Kocken, C; Krishna, S; Langsley, G; Lasonder, E; Menard, R; Meissner, M; Pradel, G; Ranford-Cartwright, L; Sharma, A; Sharma, P; Tardieux, T; Tatu, U; ... (2009). Signalling in malaria parasites. The MALSIG consortium. Parasite, 16(3), pp. 169-182. Princeps Editions 10.1051/parasite/2009163169
Stanway, Rebecca R; Witt, Tina; Zobiak, Bernd; Aepfelbacher, Martin; Heussler, Volker (2009). GFP-targeting allows visualization of the apicoplast throughout the life cycle of live malaria parasites. Biology of the cell, 101(7), pp. 415-430. Wiley 10.1042/BC20080202
Graewe, Stefanie; Retzlaff, Silke; Struck, Nicole; Janse, Chris J; Heussler, Volker (2009). Going live: a comparative analysis of the suitability of the RFP derivatives RedStar, mCherry and tdTomato for intravital and in vitro live imaging of Plasmodium parasites. Biotechnology journal, 4(6), pp. 895-902. Wiley 10.1002/biot.200900035
Sturm, Angelika; Graewe, Stefanie; Franke-Fayard, Blandine; Retzlaff, Silke; Bolte, Stefanie; Roppenser, Bernhard; Aepfelbacher, Martin; Janse, Chris; Heussler, Volker (2009). Alteration of the parasite plasma membrane and the parasitophorous vacuole membrane during exo-erythrocytic development of malaria parasites. Protist, 160(1), pp. 51-63. Elsevier 10.1016/j.protis.2008.08.002
Lüder, Carsten G K; Stanway, Rebecca R; Chaussepied, Marie; Langsley, Gordon; Heussler, Volker (2009). Intracellular survival of apicomplexan parasites and host cell modification. International journal for parasitology, 39(2), pp. 163-173. Elsevier 10.1016/j.ijpara.2008.09.013
Limenitakis Stanway, Rebecca; Graewe, Stefanie; Rennenberg, Annika; Helm, Susanne; Heussler, Volker T. (2009). Highly efficient subcloning of rodent malaria parasites by injection of single merosomes or detached cells. Nature protocols, 4(10), pp. 1433-1439. Nature Publishing Group 10.1038/nprot.2009.172
Ménard, Robert; Heussler, Volker; Yuda, Masao; Nussenzweig, Victor (2008). Plasmodium pre-erythrocytic stages: what's new? Trends in parasitology, 24(12), pp. 564-569. Elsevier Current Trends 10.1016/j.pt.2008.08.009
Tartz, Susanne; Rüssmann, Holger; Kamanova, Jana; Sebo, Peter; Sturm, Angelika; Heussler, Volker; Fleischer, Bernhard; Jacobs, Thomas (2008). Complete protection against P. berghei malaria upon heterologous prime/boost immunization against circumsporozoite protein employing Salmonella type III secretion system and Bordetella adenylate cyclase toxoid. Vaccine, 26(47), pp. 5935-5943. Elsevier 10.1016/j.vaccine.2008.08.057
Heussler, Volker; Stanway, R R (2008). Cellular and molecular interactions between the apicomplexan parasites Plasmodium and Theileria and their host cells. Parasite, 15(3), pp. 211-218. Princeps Editions
Schmidt-Christensen, Anja; Sturm, Angelika; Horstmann, Sebastian; Heussler, Volker (2008). Expression and processing of Plasmodium berghei SERA3 during liver stages. Cellular microbiology, 10(8), pp. 1723-1734. Blackwell 10.1111/j.1462-5822.2008.01162.x
Yu, Min; Kumar, T.R. Santha; Nkrumah, Louis J.; Coppi, Alida; Retzlaff, Silke; Li, Celeste D.; Kelly, Brendan J.; Moura, Pedro A.; Lakshmanan, Viswanathan; Freundlich, Joel S.; Valderramos, Juan-Carlos; Vilcheze, Catherine; Siedner, Mark; Tsai, Jennifer H.-C.; Falkard, Brie; Sidhu, Amar bir Singh; Purcell, Lisa A.; Gratraud, Paul; Kremer, Laurent; Waters, Andrew P.; ... (2008). The Fatty Acid Biosynthesis Enzyme FabI Plays a Key Role in the Development of Liver-Stage Malarial Parasites. Cell host & microbe, 4(6), pp. 567-578. Cell Press 10.1016/j.chom.2008.11.001
Lackner, P; Burger, C; Pfaller, K; Heussler, Volker; Helbok, R; Morandell, M; Broessner, G; Tannich, E; Schmutzhard, E; Beer, R (2007). Apoptosis in experimental cerebral malaria: spatial profile of cleaved caspase-3 and ultrastructural alterations in different disease stages. Neuropathology and Applied Neurobiology, 33(5), pp. 560-571. Wiley 10.1111/j.1365-2990.2007.00833.x
Sturm, Angelika; Heussler, Volker (2007). Live and let die: manipulation of host hepatocytes by exoerythrocytic Plasmodium parasites. Medical microbiology and immunology, 196(3), pp. 127-133. Springer 10.1007/s00430-007-0044-3
Sturm, Angelika; Amino, Rogerio; van de Sand, Claudia; Regen, Tommy; Retzlaff, Silke; Rennenberg, Annika; Krueger, Andreas; Pollok, Jörg-Matthias; Menard, Robert; Heussler, Volker (2006). Manipulation of host hepatocytes by the malaria parasite for delivery into liver sinusoids. Science, 313(5791), pp. 1287-1290. American Association for the Advancement of Science 10.1126/science.1129720
Heussler, Volker; Doerig, Christian (2006). In vivo imaging enters parasitology. Trends in parasitology, 22(5), pp. 192-195. Elsevier Current Trends 10.1016/j.pt.2006.03.001
Tartz, Susanne; Kamanova, Jana; Simsova, Marcela; Sebo, Peter; Bolte, Stefanie; Heussler, Volker; Fleischer, Bernhard; Jacobs, Thomas (2006). Immunization with a circumsporozoite epitope fused to Bordetella pertussis adenylate cyclase in conjunction with cytotoxic T-lymphocyte-associated antigen 4 blockade confers protection against Plasmodium berghei liver-stage malaria. Infection and immunity, 74(4), pp. 2277-2285. American Society for Microbiology 10.1128/IAI.74.4.2277-2285.2006
Lackner, P; Beer, R; Heussler, Volker; Goebel, G; Rudzki, D; Helbok, R; Tannich, E; Schmutzhard, E (2006). Behavioural and histopathological alterations in mice with cerebral malaria. Neuropathology and Applied Neurobiology, 32(2), pp. 177-188. Wiley 10.1111/j.1365-2990.2006.00706.x
Heussler, Volker; Sturm, A; Langsley, G (2006). Regulation of host cell survival by intracellular Plasmodium and Theileria parasites. Parasitology, 132(Suppl S1), S49-S60. Cambridge University Press 10.1017/S0031182006000850
van de Sand, Claudia; Horstmann, Sebastian; Schmidt, Anja; Sturm, Angelika; Bolte, Stefanie; Krueger, Andreas; Lütgehetmann, Marc; Pollok, Jörg-Matthias; Libert, Claude; Heussler, Volker (2005). The liver stage of Plasmodium berghei inhibits host cell apoptosis. Molecular microbiology, 58(3), pp. 731-742. Blackwell Science 10.1111/j.1365-2958.2005.04888.x
van Dijk, Melissa R; Douradinha, Bruno; Franke-Fayard, Blandine; Heussler, Volker; van Dooren, Maaike W; van Schaijk, Ben; van Gemert, Geert-Jan; Sauerwein, Robert W; Mota, Maria M; Waters, Andrew P; Janse, Chris J (2005). Genetically attenuated, P36p-deficient malarial sporozoites induce protective immunity and apoptosis of infected liver cells. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 102(34), pp. 12194-12199. National Academy of Sciences NAS 10.1073/pnas.0500925102
Lindenthal, C; Weich, N; Chia, Y S; Heussler, Volker; Klinkert, M Q (2005). The proteasome inhibitor MLN-273 blocks exoerythrocytic and erythrocytic development of Plasmodium parasites. Parasitology, 131(Pt 1), pp. 37-44. Cambridge University Press 10.1017/S003118200500747X
Huber, Stephan M; Duranton, Christophe; Henke, Guido; Van De Sand, Claudia; Heussler, Volker; Shumilina, Ekaterina; Sandu, Ciprian D; Tanneur, Valerie; Brand, Verena; Kasinathan, Ravi S; Lang, Karl S; Kremsner, Peter G; Hübner, Christian A; Rust, Marco B; Dedek, Karin; Jentsch, Thomas J; Lang, Florian (2004). Plasmodium induces swelling-activated ClC-2 anion channels in the host erythrocyte. Journal of biological chemistry, 279(40), pp. 41444-41452. American Society for Biochemistry and Molecular Biology 10.1074/jbc.M407618200
Waldvogel, A S; Lepage, M-F; Zakher, Anthony; Reichel, M P; Eicher, R; Heussler, Volker (2004). Expression of interleukin 4, interleukin 4 splice variants and interferon gamma mRNA in calves experimentally infected with Fasciola hepatica. Veterinary immunology and immunopathology, 97(1-2), pp. 53-63. Elsevier 10.1016/j.vetimm.2003.08.002
Saeftel, Michael; Krueger, Andreas; Arriens, Sandra; Heussler, Volker; Racz, Paul; Fleischer, Bernhard; Brombacher, Frank; Hoerauf, Achim (2004). Mice deficient in interleukin-4 (IL-4) or IL-4 receptor alpha have higher resistance to sporozoite infection with Plasmodium berghei (ANKA) than do naive wild-type mice. Infection and immunity, 72(1), pp. 322-331. American Society for Microbiology
Waldvogel, Andreas S; Zakher, Anthony; Guionaud, Christophe T; Fernandez, Paula; Heussler, Volker (2002). Regulation of bovine IL-12R beta 2 subunit mRNA expression in bovine lymph node cells. Gene, 289(1-2), pp. 61-67. Elsevier 10.1016/S0378-1119(02)00464-X
Heussler, Volker; Rottenberg, S; Schwab, R; Küenzi, P; Fernandez, PC; McKellar, S; Shiels, B; Chen, ZJ; Orth, K; Wallach, D; Dobbelaere, Dirk, (2002). Hijacking of host cell IKK signalosomes by the transforming parasite Theileria. Science, 5595(298), pp. 1033-1036. Washington, D.C.: American Association for the Advancement of Science 10.1126/science.1075462
Rottenberg, S; Schmuckli-Maurer, J; Grimm, S; Heussler, Volker; Dobbelaere, Dirk, (2002). Characterization of the bovine IkappaB kinases (IKK)alpha and IKKbeta, the regulatory subunit NEMO and their substrate IkappaBalpha. Gene, 299(1-2), pp. 293-300. Amsterdam: Elsevier 10.1016/S0378-1119(02)01011-9
Heussler, Volker; Küenzi, P; Rottenberg, S (2001). Inhibition of apoptosis by intracellular protozoan parasites. International journal for parasitology, 31(11), pp. 1166-1176. Elsevier 10.1016/S0020-7519(01)00271-5
Heussler, Volker; Küenzi, P; Fraga, F; Schwab, R A; Hemmings, B A; Dobbelaere, D A (2001). The Akt/PKB pathway is constitutively activated in Theileria-transformed leucocytes, but does not directly control constitutive NF-kappaB activation. Cellular microbiology, 3(8), pp. 537-550. Blackwell 10.1046/j.1462-5822.2001.00134.x
Waldvogel, A S; Hediger-Weithaler, B M; Eicher, R; Zakher, Anthony; Zarlenga, D S; Gasbarre, L C; Heussler, Volker (2000). Interferon-gamma and interleukin-4 mRNA expression by peripheral blood mononuclear cells from pregnant and non-pregnant cattle seropositive for bovine viral diarrhea virus. Veterinary immunology and immunopathology, 77(3-4), pp. 201-212. Elsevier 10.1016/S0165-2427(00)00240-3
Dobbelaere, D A; Fernandez, P C; Heussler, Volker (2000). Theileria parva: taking control of host cell proliferation and survival mechanisms. Cellular microbiology, 2(2), pp. 91-99. Blackwell 10.1046/j.1462-5822.2000.00045.x
Dobbelaere, D; Fernandez, P; Machado, J; Botteron, C; Heussler, Volker (1999). Interference by the intracellular parasite Theileria parva with T-cell signal transduction pathways induces transformation and protection against apoptosis. Veterinary immunology and immunopathology, 72(1-2), pp. 95-100. Elsevier 10.1016/S0165-2427(99)00121-X
Fernandez, P C; Machado, J; Heussler, Volker; Botteron, C; Palmer, G H; Dobbelaere, D A (1999). The inhibition of NF-kappaB activation pathways and the induction of apoptosis by dithiocarbamates in T cells are blocked by the glutathione precursor N-acetyl-L-cysteine. Biological chemistry, 380(12), pp. 1383-1394. De Gruyter 10.1515/BC.1999.178
Heussler, Volker; Machado, J; Fernandez, P C; Botteron, C; Chen, C G; Pearse, M J; Dobbelaere, D A (1999). The intracellular parasite Theileria parva protects infected T cells from apoptosis. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 96(13), pp. 7312-7317. National Academy of Sciences NAS 10.1073/pnas.96.13.7312
Heussler, Volker; Fernandez, P C; Machado, J; Botteron, C; Dobbelaere, D A (1999). N-acetylcysteine blocks apoptosis induced by N-alpha-tosyl-L-phenylalanine chloromethyl ketone in transformed T-cells. Cell death and differentiation, 6(4), pp. 342-350. Nature Publishing Group 10.1038/sj.cdd.4400501
Dobbelaere, D; Heussler, Volker (1999). Transformation of leukocytes by Theileria parva and T. annulata. Annual review of microbiology, 53, pp. 1-42. Annual Reviews 10.1146/annurev.micro.53.1.1
Weynants, V; Gilson, D; Furger, A; Collins, R A; Mertens, P; De Bolle, X; Heussler, Volker; Roditi, Isabel; Howard, C J; Dobbelaere, A E; Letesson, J J (1998). Production and characterisation of monoclonal antibodies specific for bovine interleukin-4. Veterinary immunology and immunopathology, 66(2), pp. 99-112. Elsevier 10.1016/S0165-2427(98)00184-6
Heussler, Volker; Kaufmann, H; Glaser, I; Ducommun, D; Müller, C; Dobbelaere, D (1998). A DNA probe for the detection of Dicrocoelium dendriticum in ants of Formica spp. and Lasius spp. Parasitology research, 84(6), pp. 505-508. Springer 10.1007/s004360050437
Gentschev, I; Glaser, I; Goebel, W; McKeever, D J; Musoke, A; Heussler, Volker (1998). Delivery of the p67 sporozoite antigen of Theileria parva by using recombinant Salmonella dublin: secretion of the product enhances specific antibody responses in cattle. Infection and immunity, 66(5), pp. 2060-2064. American Society for Microbiology
Heussler, Volker; Taracha, E L; Musoke, A; Duchateau, L; McKeever, D J (1998). Immunisation with live attenuated Salmonella dublin expressing a sporozoite protein confers partial protection against Theileria parva. Vaccine, 16(8), pp. 834-841. Elsevier 10.1016/S0264-410X(97)00263-6
Palmer, G H; Machado, J; Fernandez, P; Heussler, Volker; Perinat, T; Dobbelaere, D A (1997). Parasite-mediated nuclear factor kappaB regulation in lymphoproliferation caused by Theileria parva infection. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 94(23), pp. 12527-12532. National Academy of Sciences NAS
Daubenberger, C; Heussler, Volker; Gobright, E; Wijngaard, P; Clevers, H C; Wells, C; Tsuji, N; Musoke, A; McKeever, D (1997). Molecular characterisation of a cognate 70 kDa heat shock protein of the protozoan Theileria parva. Molecular and biochemical parasitology, 85(2), pp. 265-269. Elsevier 10.1016/S0166-6851(97)02831-4
Estes, D M; Hirano, A; Heussler, Volker; Dobbelaere, D A; Brown, W C (1995). Expression and biological activities of bovine interleukin 4: effects of recombinant bovine interleukin 4 on T cell proliferation and B cell differentiation and proliferation in vitro. Cellular immunology, 163(2), pp. 268-279. Elsevier 10.1006/cimm.1995.1126
Heussler, Volker; Dobbelaere, D A (1994). Cloning of a protease gene family of Fasciola hepatica by the polymerase chain reaction. Molecular and biochemical parasitology, 64(1), pp. 11-23. Elsevier 10.1016/0166-6851(94)90130-9
Eichhorn, M; Prospero, T D; Heussler, Volker; Dobbelaere, D A (1993). Antibodies against major histocompatibility complex class II antigens directly inhibit the growth of T cells infected with Theileria parva without affecting their state of activation. Journal of experimental medicine, 178(3), pp. 769-776. Rockefeller University Press 10.1084/jem.178.3.769
Heussler, Volker; Kaufmann, H; Strahm, D; Liz, J; Dobbelaere, D (1993). DNA probes for the detection of Fasciola hepatica in snails. Molecular and cellular probes, 7(4), pp. 261-267. Elsevier 10.1006/mcpr.1993.1039
Brown, W C; Zhao, S; Woods, V M; Tripp, C A; Tetzlaff, C L; Heussler, Volker; Dobbelaere, D A; Rice-Ficht, A C (1993). Identification of two Th1 cell epitopes on the Babesia bovis-encoded 77-kilodalton merozoite protein (Bb-1) by use of truncated recombinant fusion proteins. Infection and immunity, 61(1), pp. 236-244. American Society for Microbiology
Heussler, Volker; Eichhorn, M; Reeves, R; Magnuson, N S; Williams, R O; Dobbelaere, D A (1992). Constitutive IL-2 mRNA expression in lymphocytes, infected with the intracellular parasite Theileria parva. Journal of immunology, 149(2), pp. 562-567. American Association of Immunologists
Heussler, Volker; Eichhorn, M; Dobbelaere, D A (1992). Cloning of a full-length cDNA encoding bovine interleukin 4 by the polymerase chain reaction. Gene, 114(2), pp. 273-278. Elsevier 10.1016/0378-1119(92)90587-F
Maushe, Dorothy; Ogi, Vera; Divakaran, Keerthi; Verdecia Mogena, Arletys María; Himmighofen, Paul Anton; Machado, Ricardo A R; Towbin, Benjamin Daniel; Ehlers, Ralf-Udo; Molina, Carlos; Parisod, Christian; Robert, Christelle Aurélie Maud (2023). Stress tolerance in entomopathogenic nematodes: Engineering superior nematodes for precision agriculture. Journal of invertebrate pathology, 199, p. 107953. Elsevier 10.1016/j.jip.2023.107953
Pulfer, Alain; Pizzagalli, Diego Ulisse; Gagliardi, Paolo Armando; Hinderling, Lucien; Lopez, Paul; Zayats, Romaniya; Carrillo-Barberà, Pau; Antonello, Paola; Palomino-Segura, Miguel; Grädel, Benjamin; Nicolai, Mariaclaudia; Giusti, Alessandro; Thelen, Marcus; Gambardella, Luca Maria; Murooka, Thomas T; Pertz, Olivier; Krause, Rolf; Gonzalez, Santiago Fernandez (2024). Transformer-based spatial-temporal detection of apoptotic cell death in live-cell imaging. eLife, 12 eLife Sciences Publications 10.7554/eLife.90502
Gagliardi, Paolo Armando; Grädel, Benjamin; Jacques, Marc-Antoine; Hinderling, Lucien; Ender, Pascal; Cohen, Andrew R; Kastberger, Gerald; Pertz, Olivier; Dobrzynski, Maciej (2023). Automatic detection of spatio-temporal signaling patterns in cell collectives. The Journal of cell biology, 222(10) Rockefeller Institute Press 10.1083/jcb.202207048
Höhener, Thomas Christoph; Landolt, Alex Erich; Dessauges, Coralie; Hinderling, Lucien; Gagliardi, Paolo Armando; Pertz, Olivier (2022). LITOS: a versatile LED illumination tool for optogenetic stimulation. Scientific reports, 12(1), p. 13139. Springer Nature 10.1038/s41598-022-17312-x
Malnar Črnigoj, Mirjana; Čerček, Urša; Yin, Xiaoke; Ho, Manh Tin; Repic Lampret, Barbka; Neumann, Manuela; Hermann, Andreas; Rouleau, Guy; Suter, Beat; Mayr, Manuel; Rogelj, Boris (2023). Phenylalanine-tRNA aminoacylation is compromised by ALS/FTD-associated C9orf72 C4G2 repeat RNA. Nature communications, 14(1), p. 5764. 10.1038/s41467-023-41511-3
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Fügi, Matthias A; Gunasekera, Kapila; Ochsenreiter, Torsten; Guan, Xueli; Wenk, Markus R; Mäser, Pascal (2014). Genome profiling of sterol synthesis shows convergent evolution in parasites and guides chemotherapeutic attack. Journal of lipid research, 55(5), pp. 929-938. American Society for Biochemistry and Molecular Biology ASBMB 10.1194/jlr.M048017
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Nerima, Barbara; Nilsson, Daniel; Mäser, Pascal (2010). Comparative genomics of metabolic networks of free-living and parasitic eukaryotes. BMC Genomics, 11(1), p. 217. London: BioMed Central 10.1186/1471-2164-11-217
Mosimann, Marc; Goshima, Shinobu; Wenzler, Tanja; Lüscher, Alexandra; Uozumi, Nobuyuki; Mäser, Pascal (2010). A Trk/HKT-type K+ transporter from Trypanosoma brucei. Eukaryotic cell, 9(4), pp. 539-546. Washington, D.C.: American Society for Microbiology ASM 10.1128/EC.00314-09
Pusnik, Mascha; Charrière, Fabien; Mäser, Pascal; Waller, Ross F.; Dagley, Michael J.; Lithgow, Trevor; Schneider, André (2009). The Single Mitochondrial Porin of Trypanosoma brucei is the Main Metabolite Transporter in the Outer Mitochondrial Membrane. Molecular Biology and Evolution, 26(3), pp. 671-680. Oxford: Oxford University Press 10.1093/molbev/msn288
Ward, John M.; Mäser, Pascal; Schroeder, Julian I. (2009). Plant ion channels: gene families, physiology, and functional genomics analyses. Annual review of physiology, 71(1), pp. 59-82. Palo Alto, Calif.: Annual Reviews Inc. 10.1146/annurev.physiol.010908.163204
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Rufener, Lucien; Kaminsky, Ronald; Mäser, Pascal (2009). In vitro selection of Haemonchus contortus for benzimidazole resistance reveals a mutation at amino acid 198 of beta-tubulin. Molecular and biochemical parasitology, 168(1), pp. 120-2. Amsterdam: Elsevier 10.1016/j.molbiopara.2009.07.002
Kuettel, Sabine; Mosimann, Marc; Mäser, Pascal; Kaiser, Marcel; Brun, Reto; Scapozza, Leonardo; Perozzo, Remo (2009). Adenosine Kinase of T. b. Rhodesiense identified as the putative target of 4-[5-(4-phenoxyphenyl)-2H-pyrazol-3-yl]morpholine using chemical proteomics. PLoS neglected tropical diseases, 3(8), e506. San Francisco, Calif.: Public Library of Science 10.1371/journal.pntd.0000506
Kazibwe, Anne J.; Nerima, Barbara; de Koning, Harry P.; Mäser, Pascal; Barrett, Michael P.; Matovu, Enock (2009). Genotypic status of the TbAT1/P2 adenosine transporter of Trypanosoma brucei gambiense isolates from Northwestern Uganda following melarsoprol withdrawal. PLoS neglected tropical diseases, 3(9), e523. San Francisco, Calif.: Public Library of Science 10.1371/journal.pntd.0000523
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Vodnala, Munender; Fijolek, Artur; Rofougaran, Reza; Mosimann, Marc; Mäser, Pascal; Hofer, Anders (2008). Adenosine Kinase Mediates High Affinity Adenosine Salvage in. Journal of biological chemistry, 283(9), pp. 5380-5388. Bethesda, Md.: American Society for Biochemistry and Molecular Biology 10.1074/jbc.M705603200
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Bernhard, Sonja; Nerima, Barbara; Mäser, Pascal; Brun, Reto (2007). Melarsoprol- and pentamidine-resistant Trypanosoma brucei rhodesiense populations and their cross-resistance. International journal for parasitology, 37(13), pp. 1443-8. Kidlington, UK: Elsevier 10.1016/j.ijpara.2007.05.007
Bridges, Daniel; Gould, Matthew; Nerima, Barbara; Mäser, Pascal; Burchmore, Richard; de Koning, Harry (2007). Loss of the high-affinity pentamidine transporter is responsible for high levels of cross-resistance between arsenical and diamidine drugs in African trypanosomes. Molecular pharmacology, 71(4), pp. 1098-108. Bethesda, Md.: American Society for Pharmacology and Experimental Therapeutics 10.1124/mol.106.031351
Fankhauser, Niklaus; Nguyen-Ha, Tien-Minh; Adler, Joël; Mäser, Pascal (2007). Surface antigens and potential virulence factors from parasites detected by comparative genomics of perfect amino acid repeats. Proteome science, 5(December), p. 20. London: BioMed Central 10.1186/1477-5956-5-20
Gierth, Markus; Mäser, Pascal (2007). Potassium transporters in plants--involvement in K+ acquisition, redistribution and homeostasis. FEBS letters, 581(12), pp. 2348-56. Amsterdam: Elsevier 10.1016/j.febslet.2007.03.035
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Stefanov, Bozhidar-Adrian; Ajuh, Elvis; Allen, Sarah; Nowacki, Mariusz (2024). Eukaryotic release factor 1 from Euplotes promotes frameshifting at premature stop codons in human cells. iScience, 27(4) Elsevier 10.1016/j.isci.2024.109413
Liu, Yongqiang; Niu, Junhua; Ye, Fei; Solberg, Therese; Lu, Borong; Wang, Chundi; Nowacki, Mariusz; Gao, Shan (2024). Dynamic DNA N 6-adenine methylation (6mA) governs the encystment process, showcased in the unicellular eukaryote Pseudocohnilembus persalinus. Genome research, 34(2), pp. 256-271. Cold Spring Harbor, N.Y 10.1101/gr.278796.123
Zhang, Fukai; Bechara, Sebastian; Nowacki, Mariusz (2024). Structural maintenance of chromosomes (SMC) proteins are required for DNA elimination in Paramecium. Life science alliance, 7(2) EMBO Press 10.26508/lsa.202302281
Solberg, Therese; Mason, Victor; Wang, Chundi; Nowacki, Mariusz (2023). Developmental mRNA clearance by PIWI-bound endo-siRNAs in Paramecium. Cell reports, 42(3), p. 112213. Cell Press 10.1016/j.celrep.2023.112213
Singh, Aditi; Maurer-Alcalá, Xyrus X; Solberg, Therese; Haeussermann, Lilia; Gisler, Silvan; Ignarski, Michael; Swart, Estienne C; Nowacki, Mariusz (2022). Chromatin remodeling is required for sRNA-guided DNA elimination in Paramecium. The EMBO journal, 41(22), e111839. EMBO Press 10.15252/embj.2022111839
Wang, Chundi; Solberg, Therese; Maurer-Alcalá, Xyrus X; Swart, Estienne C; Gao, Feng; Nowacki, Mariusz (2022). A small RNA-guided PRC2 complex eliminates DNA as an extreme form of transposon silencing. Cell reports, 40(8), p. 111263. Cell Press 10.1016/j.celrep.2022.111263
Bechara, Sebastian; Kabbani, Lyna; Maurer Alcala, Xyrus; Nowacki, Mariusz (2022). Identification of novel, functional long non-coding RNAs involved in programmed, large scale genome rearrangements. RNA, 28(8), pp. 1110-1127. Cold Spring Harbor Laboratory Press 10.1261/rna.079134.122
Rzeszutek, Iwona; Swart, Estienne C; Pabian-Jewuła, Sylwia; Russo, Antonietta; Nowacki, Mariusz (2022). Early developmental, meiosis-specific proteins - Spo11, Msh4-1, and Msh5 - Affect subsequent genome reorganization in Paramecium tetraurelia. Biochimica et biophysica acta. Molecular cell research, 1869(6), p. 119239. Elsevier 10.1016/j.bbamcr.2022.119239
Allen, Sarah E.; Nowacki, Mariusz (2020). Roles of non-coding RNAs in ciliate genome architecture. Journal of molecular biology, 432(15), pp. 4186-4198. Elsevier 10.1016/j.jmb.2019.12.042
Maurer-Alcalá, Xyrus X.; Nowacki, Mariusz (2019). Evolutionary origins and impacts of genome architecture in ciliates. Annals of the New York Academy of Sciences, 1447(1), pp. 110-118. New York Academy of Sciences 10.1111/nyas.14108
Bischerour, Julien; Bhullar, Simran; Denby Wilkes, Cyril; Régnier, Vinciane; Mathy, Nathalie; Dubois, Emeline; Singh, Aditi; Swart, Estienne Carl; Arnaiz, Olivier; Sperling, Linda; Nowacki, Mariusz; Bétermier, Mireille (2018). Six domesticated PiggyBac transposases together carry out programmed DNA elimination in . eLife, 7 eLife Sciences Publications 10.7554/eLife.37927
Nowacki, Mariusz; Höhener, Cristina; Hug, Iris Sandra (2018). Dicer-like Enzymes with Sequence Cleavage Preferences. Cell, 173(1), 234-247.e7. Cell Press 10.1016/j.cell.2018.02.029
Neeb, Zachary Thomas; Nowacki, Mariusz (2018). RNA-mediated transgenerational inheritance in ciliates and plants. Chromosoma, 127(1), pp. 19-27. Springer 10.1007/s00412-017-0655-4
Michelini, Flavia; Jalihal, Ameya P.; Francia, Sofia; Meers, Chance; Neeb, Zachary Thomas; Rossiello, Francesca; Gioia, Ubaldo; Aguado, Julio; Jones-Weinert, Corey; Luke, Brian; Biamonti, Giuseppe; Nowacki, Mariusz; Storici, Francesca; Carninci, Piero; Walter, Nils G.; Fagagna, Fabrizio d’Adda di (2018). From “Cellular” RNA to “Smart” RNA: Multiple Roles of RNA in Genome Stability and Beyond. Chemical reviews, 118(8), pp. 4365-4403. American Chemical Society 10.1021/acs.chemrev.7b00487
Bhullar, Simran; Denby Wilkes, Cyril; Arnaiz, Olivier; Nowacki, Mariusz; Sperling, Linda; Meyer, Eric (2018). A mating-type mutagenesis screen identifies a zinc-finger protein required for specific DNA excision events in Paramecium. Nucleic acids research, 46(18), pp. 9550-9562. Oxford University Press 10.1093/nar/gky772
Singh, Aditi; Vancura, Adrienne; Woycicki, Rafal K.; Hogan, Daniel J; Hendrick, Alan G; Nowacki, Mariusz (2018). Determination of the presence of 5-methylcytosine in Paramecium tetraurelia. PLoS ONE, 13(10), e0206667. Public Library of Science 10.1371/journal.pone.0206667
Allen, Sarah Elizabeth; Hug, Iris Sandra; Pabian, Sylwia Weronika; Rzeszutek, Iwona Maria; Höhener, Cristina; Nowacki, Mariusz (2017). Circular Concatemers of Ultra-Short DNA Segments Produce Regulatory RNAs. Cell, 168(6), 990-999.e7. Cell Press 10.1016/j.cell.2017.02.020
Allen, Sarah Elizabeth; Nowacki, Mariusz (2017). Necessity Is the Mother of Invention: Ciliates, Transposons, and Transgenerational Inheritance. Trends in genetics, 33(3), pp. 197-207. Elsevier Current Trends 10.1016/j.tig.2017.01.005
Slabodnick, Mark M; Ruby, J Graham; Reiff, Sarah B; Swart, Estienne Carl; Gosai, Sager; Prabakaran, Sudhakaran; Witkowska, Ewa; Larue, Graham E; Fisher, Susan; Freeman, Robert M; Gunawardena, Jeremy; Chu, William; Stover, Naomi A; Gregory, Brian D; Nowacki, Mariusz; Derisi, Joseph; Roy, Scott William; Marshall, Wallace F; Sood, Pranidhi (2017). The Macronuclear Genome of Stentor coeruleus Reveals Tiny Introns in a Giant Cell. Current Biology, 27(4), pp. 569-575. Cell Press 10.1016/j.cub.2016.12.057
Furrer, Dominique; Swart, Estienne Carl; Kraft, Matthias Fabian; Sandoval, Pamela Yohanna de Lourdes; Nowacki, Mariusz (2017). Two Sets of Piwi Proteins Are Involved in Distinct sRNA Pathways Leading to Elimination of Germline-Specific DNA. Cell reports, 20(2), pp. 505-520. Cell Press 10.1016/j.celrep.2017.06.050
Swart, Estienne Carl; Serra, Valentina; Petroni, Giulio; Nowacki, Mariusz (2016). Genetic Codes with No Dedicated Stop Codon: Context-Dependent Translation Termination. Cell, 166(3), pp. 691-702. Cell Press 10.1016/j.cell.2016.06.020
Bracht, John R; Wang, Xing; Shetty, Keerthi; Chen, Xiao; Uttarotai, Grace J; Callihan, Evan C; McCloud, Sierra S; Clay, Derek M; Wang, Jingmei; Nowacki, Mariusz; Landweber, Laura F (2016). Chromosome fusions triggered by noncoding RNA. RNA biology, 14(5), pp. 620-631. Landes Bioscience 10.1080/15476286.2016.1195940
Nowacki, Mariusz; Witzany, Guenther (eds.) (2016). Biocommunication of Ciliates. Cham: Springer 10.1007/978-3-319-32211-7
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Swart, Estienne Carl; Nowacki, Mariusz (2015). The eukaryotic way to defend and edit genomes by sRNA-targeted DNA deletion. Annals of the New York Academy of Sciences, 1341, pp. 106-114. Blackwell 10.1111/nyas.12636
Ignarski, Michael; Singh, Aditi; Swart, Estienne Carl; Arambasic, Miroslav; Sandoval, Pamela Yohanna de Lourdes; Nowacki, Mariusz (2014). Paramecium tetraurelia chromatin assembly factor-1-like protein PtCAF-1 is involved in RNA-mediated control of DNA elimination. Nucleic acids research, 42(19), pp. 11952-11964. Information Retrieval Ltd. 10.1093/nar/gku874
Sandoval, Pamela Yohanna de Lourdes; Swart, Estienne Carl; Arambasic, Miroslav; Nowacki, Mariusz (2014). Functional Diversification of Dicer-like Proteins and Small RNAs Required for Genome Sculpting. Developmental cell, 28(2), pp. 174-188. Cell Press 10.1016/j.devcel.2013.12.010
Aeschlimann, Samuel H.; Jönsson, Franziska; Postberg, Jan; Stover, Nicholas A.; Petera, Robert L.; Lipps, Hans-Joachim; Nowacki, Mariusz; Swart, Estienne Carl (2014). The Draft Assembly of the Radically Organized Stylonychia lemnae Macronuclear Genome. Genome biology and evolution, 6(7), pp. 1707-1723. Oxford University Press 10.1093/gbe/evu139
Swart, Estienne Carl; Wilkes, Cyril Denby; Sandoval, Pamela Yohanna de Lourdes; Arambasic, Miroslav; Sperling, Linda; Nowacki, Mariusz (2014). Genome-wide analysis of genetic and epigenetic control of programmed DNA deletion. Nucleic acids research, 42(14), pp. 8970-8983. Oxford University Press 10.1093/nar/gku619
Almouzni, Geneviève; Altucci, Lucia; Amati, Bruno; Ashley, Neil; Baulcombe, David; Beaujean, Nathalie; Bock, Christoph; Bongcam-Rudloff, Erik; Bousquet, Jean; Braun, Sigurd; Paillerets, Brigitte Bressac-de; Bussemakers, Marion; Clarke, Laura; Conesa, Ana; Estivill, Xavier; Fazeli, Alireza; Grgurević, NeŽa; Gut, Ivo; Heijmans, Bastiaan T; Hermouet, Sylvie; ... (2014). Relationship between genome and epigenome - challenges and requirements for future research BioMed Central 10.1186/1471-2164-15-487
Arambasic, Miroslav; Sandoval, Pamela Yohanna de Lourdes; Höhener, Cristina; Singh, Aditi; Swart, Estienne Carl; Nowacki, Mariusz (2014). Pdsg1 and Pdsg2, novel proteins involved in developmental genome remodelling in Paramecium. PLoS ONE, 9(11), e112899. Public Library of Science 10.1371/journal.pone.0112899
Fuhrmann, Gloria; Swart, Estienne; Nowacki, Mariusz; Lipps, Hans J. (2013). RNA-dependent genome processing during nuclear differentiation: the model systems of stichotrichous ciliates. Epigenomics, 5(2), pp. 229-236. Future Medicine 10.2217/epi.13.15
Swart, Estienne C.; Bracht, John R.; Magrini, Vincent; Minx, Patrick; Chen, Xiao; Zhou, Yi; Khurana, Jaspreet S.; Goldman, Aaron D.; Nowacki, Mariusz; Schotanus, Klaas; Jung, Seolkyoung; Fulton, Robert S.; Ly, Amy; McGrath, Sean; Haub, Kevin; Wiggins, Jessica L.; Storton, Donna; Matese, John C.; Parsons, Lance; Chang, Wei-Jen; ... (2013). The Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomes. PLoS biology, 11(1), e1001473. Public Library of Science 10.1371/journal.pbio.1001473
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Fang, Wenwen; Wang, Xing; Bracht, John R.; Nowacki, Mariusz; Landweber, Laura F. (2012). Piwi-Interacting RNAs Protect DNA against Loss during Oxytricha Genome Rearrangement. Cell, 151(6), pp. 1243-1255. Cambridge, Mass.: Cell Press 10.1016/j.cell.2012.10.045
Swart, E.C.; Nowacki, M.; Shum, J.; Stiles, H.; Higgins, B.P.; Doak, T.G.; Schotanus, K.; Magrini, V.J.; Minx, P.; Mardis, E.R.; Landweber, L.F. (2012). The Oxytricha trifallax mitochondrial genome. Genome biology and evolution, 4(2), pp. 136-154. Oxford: Oxford University Press 10.1093/gbe/evr136
Nowacki, Mariusz; Shetty, Keerthi; Landweber, Laura F. (2011). RNA-Mediated Epigenetic Programming of Genome Rearrangements. Annual review of genomics and human genetics, 12(1), pp. 367-389. Palo Alto, Calif.: Annual Reviews Inc. 10.1146/annurev-genom-082410-101420
Nowacki, Mariusz; Haye, Joanna E.; Fang, Wenwen; Vijayan, Vikram; Landweber, Laura F. (2010). RNA-mediated epigenetic regulation of DNA copy number. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 107(51), pp. 22140-22144. Washington, D.C.: National Academy of Sciences NAS 10.1073/pnas.1012236107
Jetishi, Clirim; Balmer, Erina A; Berger, Bianca M; Faso, Carmen; Ochsenreiter, Torsten (2024). Expansion of metabolically labelled endocytic organelles and cytoskeletal cell structures in Giardia lamblia using optimised U-ExM protocols. Microbial cell, 11, pp. 198-206. Shared Science Publishers OG 10.15698/mic2024.06.825
Atchou, Kodzo; Berger, Bianca Manuela; Heussler, Volker; Ochsenreiter, Torsten (2023). Pre-gelation staining expansion microscopy (PS-ExM) for visualisation of the Plasmodium liver stage. Journal of cell science, 136(22) Company of Biologists 10.1242/jcs.261377
Amodeo, Simona; Bregy, Irina; Ochsenreiter, Torsten (2023). Mitochondrial genome maintenance - the kinetoplast story. FEMS microbiology reviews, 47(6) Blackwell Publishing Ltd 10.1093/femsre/fuac047
Amodeo, Simona; Bregy, Irina; Hoffmann, Anneliese; Fradera-Sola, Albert; Kern, Mara; Baudouin, Hélène; Zuber, Benoît; Butter, Falk; Ochsenreiter, Torsten (2023). Characterization of two novel proteins involved in mitochondrial DNA anchoring in Trypanosoma brucei. PLoS pathogens, 19(7), e1011486. Public Library of Science 10.1371/journal.ppat.1011486
Aeschlimann, Salome; Kalichava, Ana; Schimanski, Bernd; Berger, Bianca Manuela; Jetishi, Clirim; Stettler, Philip; Ochsenreiter, Torsten; Schneider, André (2022). Single p197 molecules of the mitochondrial genome segregation system of Trypanosoma brucei determine the distance between basal body and outer membrane. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 119(40), e2204294119. National Academy of Sciences NAS 10.1073/pnas.2204294119
Dewar, Caroline E; Oeljeklaus, Silke; Mani, Jan; Mühlhäuser, Wignand W D; von Känel, Corinne; Zimmermann, Johannes; Ochsenreiter, Torsten; Warscheid, Bettina; Schneider, André (2022). Mistargeting of aggregation prone mitochondrial proteins activates a nucleus-mediated posttranscriptional quality control pathway in trypanosomes. Nature Communications, 13(1), p. 3084. Springer Nature 10.1038/s41467-022-30748-z
Kalichava, Ana; Ochsenreiter, Torsten (2021). Ultrastructure expansion microscopy in Trypanosoma brucei. Open Biology, 11(10), p. 210132. The Royal Society Publishing 10.1098/rsob.210132
Amodeo, Simona; Kalichava, Ana; Fradera-Sola, Albert; Bertiaux-Lequoy, Eloïse; Guichard, Paul; Butter, Falk; Ochsenreiter, Torsten (2021). Characterization of the novel mitochondrial genome segregation factor TAP110 in Trypanosoma brucei. Journal of cell science, 134(5) Company of Biologists Limited 10.1242/jcs.254300
Baudouin, Hélène Clémentine Margareta; Pfeiffer, Laura; Ochsenreiter, Torsten (2020). A comparison of three approaches for the discovery of novel tripartite attachment complex proteins in Trypanosoma brucei. PLoS neglected tropical diseases, 14(9), e0008568. Public Library of Science 10.1371/journal.pntd.0008568
Aphasizheva, Inna; Alfonzo, Juan; Carnes, Jason; Cestari, Igor; Cruz-Reyes, Jorge; Göringer, H. Ulrich; Hajduk, Stephen; Lukeš, Julius; Madison-Antenucci, Susan; Maslov, Dmitri A.; McDermott, Suzanne M.; Ochsenreiter, Torsten; Read, Laurie K.; Salavati, Reza; Schnaufer, Achim; Schneider, André; Simpson, Larry; Stuart, Kenneth; Yurchenko, Vyacheslav; Zhou, Z. Hong; ... (2020). Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes. Trends in parasitology, 36(4), pp. 337-355. Elsevier Current Trends 10.1016/j.pt.2020.01.006
Cooper, Sinclair; Wadsworth, Elizabeth S; Ochsenreiter, Torsten; Ivens, Alasdair; Savill, Nicholas J; Schnaufer, Achim (2019). Assembly and annotation of the mitochondrial minicircle genome of a differentiation-competent strain of Trypanosoma brucei. Nucleic acids research, 47(21), pp. 11304-11325. Oxford University Press 10.1093/nar/gkz928
Schneider, André; Ochsenreiter, Torsten (2018). Failure is not an option – mitochondrial genome segregation in trypanosomes. Journal of cell science, 131(18), jcs221820. Company of Biologists Limited 10.1242/jcs.221820
Jojic, Borka; Amodeo, Simona; Ochsenreiter, Torsten (2018). The translationally controlled tumor protein TCTP is involved in cell cycle progression and heat stress response in the bloodstream form of Trypanosoma brucei. Microbial cell, 5(10), pp. 460-468. Shared Science Publishers OG 10.15698/mic2018.10.652
Jojic, Borka; Amodeo, Simona; Bregy, Irina; Ochsenreiter, Torsten (2018). Distinct 3′ UTRs regulate the life-cycle-specific expression of two TCTP paralogs in Trypanosoma brucei. Journal of cell biology, 131(9) Rockefeller Institute Press 10.1242/jcs.206417
Amodeo, Simona; Jakob, Martin; Ochsenreiter, Torsten (2018). Characterization of the novel mitochondrial genome replication factor MiRF172 in Trypanosoma brucei. Journal of cell science, 131(8) Company of Biologists Limited 10.1242/jcs.211730
Hoffmann, Anneliese; Käser, Sandro; Jakob, Martin; Amodeo, Simona; Peitsch, Camille Françoise; Týč, Jiří; Vaughan, Sue; Zuber, Benoît; Schneider, André; Ochsenreiter, Torsten (2018). Molecular model of the mitochondrial genome segregation machinery in Trypanosoma brucei. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 115(8), E1809-E1818. National Academy of Sciences NAS 10.1073/pnas.1716582115
Cirovic, Olivera; Trikin, Roman; Hoffmann, Anneliese; Doiron, Nicholas; Jakob, Martin; Ochsenreiter, Torsten (2017). The nuclear RNA binding protein RBP33 influences mRNA and spliced leader RNA abundance in Trypanosoma brucei. Molecular and biochemical parasitology, 212, pp. 16-20. Elsevier 10.1016/j.molbiopara.2016.12.008
Jakob, Martin; Hoffmann, Anneliese; Amodeo, Simona; Peitsch, Camille; Zuber, Benoît; Ochsenreiter, Torsten (2016). Mitochondrial growth during the cell cycle of Trypanosoma brucei bloodstream forms. Scientific Reports, 6(36565), p. 36565. Nature Publishing Group 10.1038/srep36565
Hoffmann, Anneliese; Jakob, Martin; Ochsenreiter, Torsten (2016). A novel component of the mitochondrial genome segregation machinery in trypanosomes. Microbial cell, 3(8), pp. 352-354. Shared Science Publishers OG 10.15698/mic2016.08.519
Trikin, Roman; Doiron, Nicholas; Hoffmann, Anneliese; Haenni, Beat; Jakob, Martin; Schnaufer, Achim; Schimanski, Bernd; Zuber, Benoît; Ochsenreiter, Torsten (2016). Correction: TAC102 Is a Novel Component of the Mitochondrial Genome Segregation Machinery in Trypanosomes. PLoS pathogens, 12(7), e1005750. Public Library of Science 10.1371/journal.ppat.1005750
Trikin, Roman; Doiron, Nicholas; Hoffmann, Anneliese; Haenni, Beat; Jakob, Martin; Schnaufer, Achim; Schimanski, Bernd; Zuber, Benoît; Ochsenreiter, Torsten (2016). TAC102 Is a Novel Component of the Mitochondrial Genome Segregation Machinery in Trypanosomes. PLoS pathogens, 12(5), e1005586. Public Library of Science 10.1371/journal.ppat.1005586
Naguleswaran, Arunasalam; Gunasekera, Kapila; Schimanski, Bernd; Heller, Manfred; Hemphill, Andrew; Ochsenreiter, Torsten; Roditi, Isabel (2015). Trypanosoma brucei RRM1 is a nuclear RNA-binding protein and modulator of chromatin structure. mBio, 6(2), e00114. American Society for Microbiology 10.1128/mBio.00114-15
Fügi, Matthias A; Gunasekera, Kapila; Ochsenreiter, Torsten; Guan, Xueli; Wenk, Markus R; Mäser, Pascal (2014). Genome profiling of sterol synthesis shows convergent evolution in parasites and guides chemotherapeutic attack. Journal of lipid research, 55(5), pp. 929-938. American Society for Biochemistry and Molecular Biology ASBMB 10.1194/jlr.M048017
Schnarwiler, Felix; Niemann, Moritz; Doiron, Nicholas; Harsman, Anke Judith; Käser, Sandro; Mani, Jan; Chanfon, Astrid; Dewar, C. E.; Oeljeklaus, S.; Jackson, Christopher; Pusnik, M.; Schmidt, O.; Meisinger, C.; Hiller, S.; Warscheid, B.; Schnaufer, A. C.; Ochsenreiter, Torsten; Schneider, André (2014). Trypanosomal TAC40 constitutes a novel subclass of mitochondrial -barrel proteins specialized in mitochondrial genome inheritance. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 111(21), pp. 7624-7629. National Academy of Sciences NAS 10.1073/pnas.1404854111
Cirovic, Olivera; Ochsenreiter, Torsten (2014). Whole proteome analysis of the protozoan parasite Trypanosoma brucei using stable isotope labeling by amino acids in cell culture and mass spectrometry. Methods in molecular biology, 1188, pp. 47-55. Springer 10.1007/978-1-4939-1142-4_4
Cirovic, Olivera; Ochsenreiter, Torsten (2013). Whole Proteome Analysis of the Protozoan Parasite Trypanosoma brucei using Stable Isotope Labeling by Amino Acids in Cell Culture and Mass Spectrometry. In: SILAC. Methods in Molecular Biology. Heidelberg: Springer
Rettig, Jochen; Wang, Yimu M.; Schneider, André; Ochsenreiter, Torsten (2012). Dual targeting of isoleucyl-tRNA synthetase in Trypanosoma brucei is mediated through alternative trans-splicing. Nucleic acids research, 40(3), pp. 1299-1306. London: Oxford University Press 10.1093/nar/gkr794
Gunasekera, Kapila; Wüthrich, Daniel; Braga-Lagache, Sophie; Heller, Manfred; Ochsenreiter, Torsten (2012). Proteome remodelling during development from blood to insect-form Trypanosoma brucei quantified by SILAC and mass spectrometry. BMC Genomics, 13, p. 556. London: BioMed Central 10.1186/1471-2164-13-556
Ekanayake, D.; Minning, T.; Weatherly, B.; Gunasekera, K.; Nilsson, D.; Tarleton, R.; Ochsenreiter, T.; Sabatini, R. (2011). Epigenetic regulation of transcription and virulence in Trypanosoma cruzi by O-linked thymine glucosylation of DNA. Molecular and cellular biology, 31(8), pp. 1690-1700. Washington, D.C.: American Society for Microbiology 10.1128/MCB.01277-10
Siegel, N.T.; Gunasekera, K.; Cross, G.A.; Ochsenreiter, T. (2011). Gene expression in Trypanosoma brucei: lessons from high throughput RNA sequencing. Trends in parasitology, 27(10), pp. 434-441. Oxford: Elsevier Current Trends 10.1016/j.pt.2011.05.006
Nilsson, Daniel; Gunasekera, Kapila; Mani, Jan; Osteras, Magne; Farinelli, Laurent; Baerlocher, Loic; Roditi, Isabel; Ochsenreiter, Torsten (2010). Spliced leader trapping reveals widespread alternative splicing patterns in the highly dynamic transcriptome of Trypanosoma brucei. PLoS pathogens, 6(8), e1001037. San Francisco, Calif.: Public Library of Science 10.1371/journal.ppat.1001037
Hajduk, Stephen; Ochsenreiter, Torsten (2010). RNA editing in kinetoplastids. RNA biology, 7(2), pp. 229-36. Georgetown, Tex.: Landes Bioscience 10.4161/rna.7.2.11393
Zhang, Xiaobai; Cui, Juan; Nilsson, Daniel; Gunasekera, Kapila; Chanfon, Astrid; Song, Xiaofeng; Wang, Huinan; Xu, Ying; Ochsenreiter, Torsten (2010). The Trypanosoma brucei MitoCarta and its regulation and splicing pattern during development. Nucleic acids research, 38(21), pp. 7378-87. London: Oxford University Press 10.1093/nar/gkq618
Doll, Eveline; Molnar, Monika; Cuanoud, Gabriella; Octobre, Guillaume; Latypov, Vitaly; Ludin, Katja; Kohli, Jürg (2008). Cohesin and recombination proteins influence the G1-to-S transition in azygotic meiosis in Schizosaccharomyces pombe. Genetics, 180(2), pp. 727-740. Bethesda, Md.: Genetics Society of America 10.1534/genetics.108.092619
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Florini, Francesca; Naguleswaran, Arunasalam; Gharib, Walid H; Bringaud, Frédéric; Roditi, Isabel (2019). Unexpected diversity in eukaryotic transcription revealed by the retrotransposon hotspot family of Trypanosoma brucei. Nucleic acids research, 47(4), pp. 1725-1739. Oxford University Press 10.1093/nar/gky1255
Naguleswaran, Arunasalam; Doiron, Nicholas; Roditi, Isabel (2018). RNA-Seq analysis validates the use of culture-derived Trypanosoma brucei and provides new markers for mammalian and insect life-cycle stages. BMC Genomics, 19(1), p. 227. BioMed Central 10.1186/s12864-018-4600-6
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Aeby, Eric; Ullu, Elisabetta; Yepiskoposyan, Hasmik; Schimanski, Bernd; Roditi, Isabel; Mühlemann, Oliver; Schneider, André (2010). tRNASec is transcribed by RNA polymerase II in Trypanosoma brucei but not in humans. Nucleic acids research, 38(17), pp. 5833-5843. London: Oxford University Press 10.1093/nar/gkq345
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Güttinger, Andreas; Schwab, Claudia; Morand, Sabine; Roditi, Isabel; Vassella, Erik (2007). A mitogen-activated protein kinase of Trypanosoma brucei confers resistance to temperature stress. Molecular and biochemical parasitology, 153(2), pp. 203-206. Amsterdam: Elsevier 10.1016/j.molbiopara.2007.02.001
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Spoerri, Iris; Chadwick, Ruth; Renggli, Christina; Matthews, Keith; Roditi, Isabel; Burkard, Gabriela (2007). Role of the stage-regulated nucleoside transporter TbNT10 in differentiation and adenosine uptake in Trypanosoma brucei. Molecular and biochemical parasitology, 154(1), pp. 110-4. Amsterdam: Elsevier 10.1016/j.molbiopara.2007.04.006
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Domenicali Pfister, Debora; Burkard, Gabriela; Morand, Sabine; Renggli, Christina Kunz; Roditi, Isabel; Vassella, Erik (2006). A Mitogen-activated protein kinase controls differentiation of bloodstream forms of Trypanosoma brucei. Eukaryotic cell, 5(7), pp. 1126-35. Washington, D.C.: American Society for Microbiology ASM 10.1128/EC.00094-06
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Aphasizheva, Inna; Alfonzo, Juan; Carnes, Jason; Cestari, Igor; Cruz-Reyes, Jorge; Göringer, H. Ulrich; Hajduk, Stephen; Lukeš, Julius; Madison-Antenucci, Susan; Maslov, Dmitri A.; McDermott, Suzanne M.; Ochsenreiter, Torsten; Read, Laurie K.; Salavati, Reza; Schnaufer, Achim; Schneider, André; Simpson, Larry; Stuart, Kenneth; Yurchenko, Vyacheslav; Zhou, Z. Hong; ... (2020). Lexis and Grammar of Mitochondrial RNA Processing in Trypanosomes. Trends in parasitology, 36(4), pp. 337-355. Elsevier Current Trends 10.1016/j.pt.2020.01.006
Schneider, André; Ochsenreiter, Torsten (2018). Failure is not an option – mitochondrial genome segregation in trypanosomes. Journal of cell science, 131(18), jcs221820. Company of Biologists Limited 10.1242/jcs.221820
Hoffmann, Anneliese; Käser, Sandro; Jakob, Martin; Amodeo, Simona; Peitsch, Camille Françoise; Týč, Jiří; Vaughan, Sue; Zuber, Benoît; Schneider, André; Ochsenreiter, Torsten (2018). Molecular model of the mitochondrial genome segregation machinery in Trypanosoma brucei. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 115(8), E1809-E1818. National Academy of Sciences NAS 10.1073/pnas.1716582115
de Macêdo, Juan P.; Schumann-Burkard, Gabriela; Niemann, Moritz; Barrett, Michael P.; Vial, Henri; Mäser, Pascal; Roditi, Isabel; Schneider, André; Bütikofer, Peter; Horn, David (2015). An Atypical Mitochondrial Carrier That Mediates Drug Action in Trypanosoma brucei. PLoS pathogens, 11(5), e1004875. Public Library of Science 10.1371/journal.ppat.1004875
Schnarwiler, Felix; Niemann, Moritz; Doiron, Nicholas; Harsman, Anke Judith; Käser, Sandro; Mani, Jan; Chanfon, Astrid; Dewar, C. E.; Oeljeklaus, S.; Jackson, Christopher; Pusnik, M.; Schmidt, O.; Meisinger, C.; Hiller, S.; Warscheid, B.; Schnaufer, A. C.; Ochsenreiter, Torsten; Schneider, André (2014). Trypanosomal TAC40 constitutes a novel subclass of mitochondrial -barrel proteins specialized in mitochondrial genome inheritance. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 111(21), pp. 7624-7629. National Academy of Sciences NAS 10.1073/pnas.1404854111
Rettig, Jochen; Wang, Yimu M.; Schneider, André; Ochsenreiter, Torsten (2012). Dual targeting of isoleucyl-tRNA synthetase in Trypanosoma brucei is mediated through alternative trans-splicing. Nucleic acids research, 40(3), pp. 1299-1306. London: Oxford University Press 10.1093/nar/gkr794
Aeby, Eric; Ullu, Elisabetta; Yepiskoposyan, Hasmik; Schimanski, Bernd; Roditi, Isabel; Mühlemann, Oliver; Schneider, André (2010). tRNASec is transcribed by RNA polymerase II in Trypanosoma brucei but not in humans. Nucleic acids research, 38(17), pp. 5833-5843. London: Oxford University Press 10.1093/nar/gkq345
Cristodero, Marina; Seebeck, Thomas; Schneider, André (2010). Mitochondrial translation is essential in bloodstream forms of Trypanosoma brucei. Molecular microbiology, 78(3), pp. 757-769. Oxford: Blackwell Science 10.1111/j.1365-2958.2010.07368.x
Pusnik, Mascha; Charrière, Fabien; Mäser, Pascal; Waller, Ross F.; Dagley, Michael J.; Lithgow, Trevor; Schneider, André (2009). The Single Mitochondrial Porin of Trypanosoma brucei is the Main Metabolite Transporter in the Outer Mitochondrial Membrane. Molecular Biology and Evolution, 26(3), pp. 671-680. Oxford: Oxford University Press 10.1093/molbev/msn288
Asparuhova, Maria B.; Barde, Isabelle; Trono, Didier; Schranz, Karin; Schümperli, Daniel (2008). Development and characterization of a triple combination gene therapy vector inhibiting HIV-1 multiplication. Journal of gene medicine, 10(10), pp. 1059-1070. Chichester: Wiley 10.1002/jgm.1238
Hulpia, Fabian; Mabille, Dorien; Campagnaro, Gustavo; Schumann, Gabriela; Maes, Louis; Roditi, Isabel; Hofer, Anders; de Koning, Harry; Caljon, Guy; Von Calenbergh, Serge (2019). Combining tubercidin and cordycepin scaffolds results in highly active candidates to treat late-stage sleeping sickness. Nature Communications, 10(1), p. 5564. Springer Nature 10.1038/s41467-019-13522-6
Roditi, Isabel; Schumann-Burkard, Gabriela; Naguleswaran, Arunasalam (2016). Environmental sensing by African trypanosomes. Current opinion in microbiology, 32, pp. 26-30. Current Biology Ltd. 10.1016/j.mib.2016.04.011
Wenzler, Tanja; Schumann-Burkard, Gabriela; Schmidt, Remo S.; Mäser, Pascal; Bergner, Andreas; Roditi, Isabel; Brun, Reto (2016). A new approach to chemotherapy: drug-induced differentiation kills African trypanosomes. Scientific Reports, 6(22451), p. 22451. Nature Publishing Group 10.1038/srep22451
Vanwalleghem, G; Fontaine, F; Lecordier, L; Tebabi, P; Klewe, K; Nolan, DP; Yamaryo-Botté, Y; Botté, C; Schumann-Burkard, Gabriela; Rassow, J; Roditi, Isabel; Perez-Morga, D; Pays, E (2015). Coupling of lysosomal and mitochondrial membrane permeabilization in trypanolysis by APOL1. Nature communications, 6(8078), p. 8078. Nature Publishing Group 10.1038/ncomms9078
de Macêdo, Juan P.; Schumann-Burkard, Gabriela; Niemann, Moritz; Barrett, Michael P.; Vial, Henri; Mäser, Pascal; Roditi, Isabel; Schneider, André; Bütikofer, Peter; Horn, David (2015). An Atypical Mitochondrial Carrier That Mediates Drug Action in Trypanosoma brucei. PLoS pathogens, 11(5), e1004875. Public Library of Science 10.1371/journal.ppat.1004875
Lecordier, Laurence; Uzureau, P; Tebabi, P; Perez-Morga, D; Nolan, D; Schumann-Burkard, Gabriela; Roditi, Isabel; Pays, E (2014). Identification of Trypanosoma brucei components involved in trypanolysis by normal human serum. Molecular microbiology, 94(3), pp. 625-636. Blackwell Science 10.1111/mmi.12783
Schumann Burkard, Gabriela; Käser, Sandro; de Araújo, Patricia; Schimanski, Bernd; Naguleswaran, Arunasalam; Knüsel, Sebastian; Heller, Manfred; Roditi, Isabel (2013). Nucleolar proteins regulate stage-specific gene expression and ribosomal RNA maturation in Trypanosoma brucei. Molecular microbiology, 88(4), pp. 827-840. Blackwell Science 10.1111/mmi.12227
Schumann Burkard, Gabriela; Jutzi, Pascal; Roditi, Isabel (2011). Genome-wide RNAi screens in bloodstream form trypanosomes identify drug transporters. Molecular and biochemical parasitology, 175(1), pp. 91-94. Amsterdam: Elsevier 10.1016/j.molbiopara.2010.09.002
Naula, N.; Hilti, N.; Schweingruber, A. M.; Schweingruber, Martin-Ernst (2003). Cordycepin in Schizosaccharomyces pombe : effects on the wild type and phenotypes of mutants resistant to the drug. Current genetics, 43(6), pp. 400-406. Springer-Verlag 10.1007/s00294-003-0413-4
Ruepp, Marc-David; Schweingruber, Christoph; Kleinschmidt, Nicole; Schümperli, Daniel (2011). Interactions of CstF-64, CstF-77, and symplekin: Implications on localisation and function. Molecular biology of the cell, 22(1), pp. 91-104. Bethesda, Md.: American Society for Cell Biology 10.1091/mbc.E10-06-0543
Ruepp, Marc-David; Schweingruber, Christoph; Kleinschmidt, Nicole; Schümperli, Daniel (2010). Interactions of symplekin, CstF-64, and CstF-77. Implications for localisation, stability and function. In: The Fifteenth Annual Meeting of the RNA Society Seattle, Washington USA, June 22-26, 2010 (p. 1). RNA Society
Vogl, C; Klein, CM; Batke, AF; Schweingruber, Martin-Ernst; Stolz, J (2008). Characterization of Thi9, a novel thiamine (Vitamin B1) transporter from Schizosaccharomyces pombe. Journal of biological chemistry, 283(12), pp. 7379-7389. Bethesda, Md.: American Society for Biochemistry and Molecular Biology 10.1074/jbc.M708275200
Naula, N.; Hilti, N.; Schweingruber, A. M.; Schweingruber, Martin-Ernst (2003). Cordycepin in Schizosaccharomyces pombe : effects on the wild type and phenotypes of mutants resistant to the drug. Current genetics, 43(6), pp. 400-406. Springer-Verlag 10.1007/s00294-003-0413-4
Barman-Aksözen, Jasmin; Ćwiek, Paulina; Bansode, Vijay B.; Koentgen, Frank; Trüb, Judith; Pelczar, Pawel; Cinelli, Paolo; Schneider-Yin, Xiaoye; Schümperli, Daniel; Minder, Elisabeth I. (2017). Modeling the ferrochelatase c.315-48C modifier mutation for erythropoietic protoporphyria (EPP) in mice. Disease models & mechanisms, 10(3), pp. 225-233. Company of Biologists Ltd. 10.1242/dmm.027755
Li, Meiling; Lightfoot, Helen Louise; Halloy, Francois; Malinowska, Anna; Berk, Christian; Behera, Alok; Schümperli, Daniel; Hall, Jonathan (2017). Synthesis and cellular activity of stereochemically-pure 2’-O-(2-methoxyethyl)-phosphorothioate oligonucleotides. Chemical communications, 53(3), pp. 541-544. Royal Society of Chemistry 10.1039/C6CC08473G
Odermatt, Philipp; Trüb, Judith; Furrer, Lavinia; Fricker, Roger; Marti, Andreas; Schümperli, Daniel (2016). Somatic therapy of a mouse SMA model with a U7 snRNA gene correcting SMN2 splicing. Molecular therapy, 24(10), pp. 1797-1805. Nature Publishing Group 10.1038/mt.2016.152
Schümperli, Daniel (2016). Rudolf Weber (1922-2015): a driving force in the transition of developmental biology into a molecular and cellular science. Development genes and evolution, 226(2), pp. 65-67. Springer 10.1007/s00427-016-0532-9
Romeo, Valentina; Schümperli, Daniel (2016). Cycling in the nucleus: regulation of RNA 3' processing and nuclear organization of replication-dependent histone genes. Current opinion in cell biology, 40, pp. 23-31. Elsevier 10.1016/j.ceb.2016.01.015
Neve, Anuja Vilas; Trüb, Judith; Saxena, Smita; Schümperli, Daniel (2016). Central and peripheral defects in motor units of the diaphragm of spinal muscular atrophy mice. Molecular and cellular neuroscience, 70, pp. 30-41. Elsevier 10.1016/j.mcn.2015.11.007
Duque, Sandra I; Arnold, W David; Odermatt, Philipp; Li, Xiaohui; Porensky, Paul N; Schmelzer, Leah; Meyer, Kathrin; Kolb, Stephen J; Schümperli, Daniel; Kaspar, Brian K; Burghes, Arthur H M (2015). A large animal model of spinal muscular atrophy and correction of phenotype. Annals of neurology, 77(3), pp. 399-414. Wiley-Blackwell 10.1002/ana.24332
Raczynska, Katarzyna Dorota; Ruepp, Marc-David; Brzek, Aleksandra; Reber, Stefan; Romeo, Valentina; Rindlisbacher, Barbara; Heller, Manfred; Szweykowska-Kulinska, Zofia; Jarmolowski, Artur; Schümperli, Daniel (2015). FUS/TLS contributes to replication-dependent histone gene expression by interaction with U7 snRNPs and histone-specific transcription factors. Nucleic acids research, 43(20), pp. 9711-9728. Oxford University Press 10.1093/nar/gkv794
Romeo, Valentina; Griesbach, Esther; Schümperli, Daniel (2014). CstF64: cell cycle regulation and functional role in 3' end processing of replication-dependent histone mRNAs. Molecular and cellular biology, 34(23), pp. 4272-4284. American Society for Microbiology 10.1128/MCB.00791-14
Voigt, Tilman; Neve, Anuja Vilas; Schümperli, Daniel (2014). The craniosacral progression of muscle development influences the emergence of neuromuscular junction alterations in a severe murine model for spinal muscular atrophy. Neuropathology and Applied Neurobiology, 40(4), pp. 416-434. Wiley 10.1111/nan.12064
Huo, Qing; Kayikci, Melis; Odermatt, Philipp; Meyer, Kathrin; Michels, Olivia; Saxena, Smita; Ule, Jernej; Schümperli, Daniel (2014). Splicing changes in SMA mouse motoneurons and SMN-depleted neuroblastoma cells: evidence for involvement of splicing regulatory proteins. RNA biology, 11(11), pp. 1430-1446. Landes Bioscience 10.1080/15476286.2014.996494
Duque, S.; Porensky, P.; William, D.A.; Odermatt, Philipp; Nlend, Rachel; Bevan, A.K.; Foust, K.; Braun, L.; Schmelzer, L.; Schümperli, Daniel; Kaspar, B.K.; Burghes, A.H.M. (2013). O.8 Intrathecal delivery of AAV9 vectors to model and rescue a large animal model of SMA. Neuromuscular disorders, 23(9-10), p. 797. Elsevier 10.1016/j.nmd.2013.06.558
Burghes, A.; McGovern, V.; Porensky, P.; Duque, S.; Bevan, A.; Foust, K.; Odermatt, P.; Nlend, R.; Massoni-Laporte, A.; Mitrpant, C.; Wilton, S.; Schümperli, Daniel; Kaspar, B. (October 2012). Spinal muscular atrophy SMA: SMNs spatial requirement and therapies. Neuromuscular disorders, 22(9-10), pp. 907-908. Amsterdam: Elsevier 10.1016/j.nmd.2012.06.342
Meyer, K.; Schümperli, Daniel (2012). Antisense Derivatives of U7 Small Nuclear RNA as Modulators of Pre-mRNA Splicing. In: Stamm, Stefan; Smith, Christopher W. J.; Lührmann, Reinhard (eds.) Alternative pre-mRNA Splicing: Theory and Protocols (pp. 481-494). Chichester: John Wiley & Sons 10.1002/9783527636778.ch45
Nlend Nlend, R.; Schümperli, Daniel (2012). Antisense Genes to Induce Exon Inclusion. In: Aartsma-Rus, Annemieke (ed.) Exon Skipping : Methods and Protocols. Methods in Molecular Biology: Vol. 867 (pp. 325-347). Heidelberg: Springer 10.1007/978-1-61779-767-5_21
Schümperli, Daniel (2012). Beeinflusst die moderne Bio- und Gentechnologie die Evolution? In: Dubach, Martina (ed.) Evolution wohin? Die Folgen der darwinschen Theorie (pp. 201-213). Zürich: vdf Hochschulverlag
Schümperli, Daniel (2012). Eigenschaften gentechnisch veränderter Pflanzen. In: , (ed.) Nutzen und Risiken der Freisetzung gentechnisch veränderter Pflanzen. Chancen nutzen, Risiken vermeiden, Kompetenzen erhalten. Programmsynthese NFP 59 (pp. 74-95). Zürich: vdf Hochschulverlag
Ruepp, Marc-David; Schweingruber, Christoph; Kleinschmidt, Nicole; Schümperli, Daniel (2011). Interactions of CstF-64, CstF-77, and symplekin: Implications on localisation and function. Molecular biology of the cell, 22(1), pp. 91-104. Bethesda, Md.: American Society for Cell Biology 10.1091/mbc.E10-06-0543
Ruepp, Marc-David; Schümperli, Daniel; Barabino, Silvia M.L. (2011). mRNA 3' end processing and more - multiple functions of mammalian cleavage factor I-68. RNA - a publication of the RNA Society, 2(1), pp. 79-91. Woodbury, N.Y.: Cold Spring Harbor Laboratory Press 10.1002/wrna.35
Voigt, Tilman; Meyer, Kathrin; Baum, Oliver; Schümperli, Daniel (2010). Ultrastructural changes in diaphragm neuromuscular junctions in a severe mouse model for Spinal Muscular Atrophy and their prevention by bifunctional U7 snRNA correcting SMN2 splicing. Neuromuscular disorders, 20(11), pp. 744-52. Amsterdam: Elsevier 10.1016/j.nmd.2010.06.010
Matulis, Gediminas; Sanderson, Joseph P; Lissin, Nikolai M; Asparuhova, Maria B; Bommineni, Gopal R; Schümperli, Daniel; Schmidt, Richard R; Villiger, Peter M; Jakobsen, Bent K; Gadola, Stephan D (2010). Innate-like control of human iNKT cell autoreactivity via the hypervariable CDR3beta loop. PLoS biology, 8(6), e1000402. Lawrence, Kans.: Public Library of Science 10.1371/journal.pbio.1000402
Ruepp, Marc-David; Schweingruber, Christoph; Kleinschmidt, Nicole; Schümperli, Daniel (2010). Interactions of symplekin, CstF-64, and CstF-77. Implications for localisation, stability and function. In: The Fifteenth Annual Meeting of the RNA Society Seattle, Washington USA, June 22-26, 2010 (p. 1). RNA Society
Ruepp, Marc-David; Vivarelli, Silvia; Pillai, Ramesh S.; Kleinschmidt, Nicole; Azzouz, Teldja N.; Barabino, Silvia M.L.; Schümperli, Daniel (2010). The 68 kDa subunit of mammalian cleavage factor I interacts with the U7 small nuclear ribonucleoprotein and participates in 30-end processing of animal histone mRNAs. Nucleic acids research, 38(21), pp. 7637-7650. London: Oxford University Press 10.1093/nar/gkq613
Ittig, Damian; Luisier, Samuel; Weiler, Jan; Schümperli, Daniel; Leumann, Christian J. (2010). Improving gene silencing of siRNAs via tricyclo-DNA modification. Artificial DNA, PNA & XNA, 1(1), pp. 9-16. Austin, Tex.: Landes Bioscience 10.4161/adna.1.1.11385
Nlend, Rachel Nlend; Meyer, Kathrin; Schümperli, Daniel (2010). Repair of pre-mRNA splicing: Prospects for a therapy for Spinal Muscular Atrophy. RNA biology, 7(4), pp. 730-740. Georgetown, Tex.: Landes Bioscience 10.4161/rna.7.4.12206
Barta, Andrea; Schümperli, Daniel (2010). Editorial on Alternative Splicing and Disease. RNA - a publication of the RNA Society, 7(4), pp. 388-389. Woodbury, N.Y.: Cold Spring Harbor Laboratory Press 10.4161/rna.7.4.12818
Meyer, Kathrin; Marquis, Julien; Trüb, Judith; Nlend Nlend, Rachel; Verp, Sonia; Ruepp, Marc-David; Imboden, Hans; Barde, Isabelle; Trono, Didier; Schümperli, Daniel (2009). Rescue of a severe mouse model for spinal muscular atrophy by U7 snRNA-mediated splicing modulation. Human molecular genetics, 18(3), pp. 546-555. Oxford: Oxford University Press 10.1093/hmg/ddn382
Marquis, J.; Kampfer, S.S.; Angehrn, L.; Schümperli, Daniel (2009). Doxycycline-controlled splicing modulation by regulated antisense U7 snRNA expression cassettes. Gene therapy, 16(1), pp. 70-7. London: Nature Publishing Group 10.1038/gt.2008.138
Ruepp, Marc-David; Aringhieri, Chiara; Vivarelli, Silvia; Cardinale, Stefano; Paro, Simona; Schümperli, Daniel; Barabino, Silvia M.L. (2009). Mammalian pre-mRNA 3' end processing factor CF I m 68 functions in mRNA export. Molecular biology of the cell, 20(24), pp. 5211-23. Bethesda, Md.: American Society for Cell Biology 10.1091/mbc.E09-05-0389
Asparuhova, Maria B.; Barde, Isabelle; Trono, Didier; Schranz, Karin; Schümperli, Daniel (2008). Development and characterization of a triple combination gene therapy vector inhibiting HIV-1 multiplication. Journal of gene medicine, 10(10), pp. 1059-1070. Chichester: Wiley 10.1002/jgm.1238
Ittig, Damian; Schümperli, Daniel; Leumann, Christian J. (2008). Tc-DNA modified siRNA. Nucleic Acids Symposium Series, 52(1), pp. 501-502. Oxford University Press 10.1093/nass/nrn254
Marquis, Julien; Meyer, Kathrin; Angehrn, Larissa; Kämpfer, Sacha; Rothen-Rutishauser, Barbara; Schümperli, Daniel (2007). Spinal muscular atrophy: SMN2 pre-mRNA splicing corrected by a U7 snRNA derivative carrying a splicing enhancer sequence. Molecular therapy, 15(8), pp. 1479-1486. New York, N.Y.: Nature Publishing Group 10.1038/sj.mt.6300200
Asparuhova, Maria B.; Marti, Gabriela; Liu, Songkai; Serhan, Fatima; Trono, Didier; Schümperli, Daniel (2007). Inhibition of HIV-1 multiplication by a modified U7 snRNA inducing Tat and Rev exon skipping. Journal of gene medicine, 9(5), pp. 323-334. Chichester: Wiley 10.1002/jgm.1027
Scholl, Raphael; Marquis, Julien; Meyer, Kathrin; Schümperli, Daniel (2007). Spinal Muscular Atrophy: position and functional importance of the branch site preceding SMN exon 7. RNA biology, 4(1), pp. 34-37. Georgetown, Tex.: Landes Bioscience 10.4161/rna.4.1.4534
Azzouz, Teldja N.; Pillai, Ramesh S.; Däpp, Christoph; Chari, Ashwin; Meister, Gunter; Kambach, Christian; Fischer, Utz; Schümperli, Daniel (2005). Toward an assembly line for U7 snRNPs: interactions of U7-specific Lsm proteins with PRMT5 and SMN complexes. Journal of biological chemistry, 280(41), pp. 34435-34440. American Society for Biochemistry and Molecular Biology 10.1074/jbc.M505077200
Xu, Hongzhi; Pillai, Ramesh S.; Azzouz, Teldja N.; Shpargel, Karl B.; Kambach, Christian; Hebert, Michael D.; Schümperli, Daniel; Matera, A. Gregory (2005). The C-terminal domain of coilin interacts with Sm proteins and U snRNPs. Chromosoma, 114(3), pp. 155-166. Springer 10.1007/s00412-005-0003-y
Gorgoni, Barbara; Andrews, Stuart; Schaller, André; Schümperli, Daniel; Gray, Nicola K; Müller, Berndt (2005). The stem-loop binding protein stimulates histone translation at an early step in the initiation pathway. RNA - a publication of the RNA Society, 11(7), pp. 1030-1042. Woodbury, N.Y.: Cold Spring Harbor Laboratory Press 10.1261/rna.7281305
Azzouz, Teldja N.; Gruber, Andreas; Schümperli, Daniel (2005). U7 snRNP-specific Lsm11 protein: dual binding contacts with the 100 kDa zinc finger processing factor (ZFP100) and a ZFP100-independent function in histone RNA 3' end processing. Nucleic acids research, 33(7), pp. 2106-2117. Oxford University Press 10.1093/nar/gki516
Ittig, D.; Liu, Shi-Xia; Renneberg, Dorte; Schümperli, Daniel; Leumann, Christian (2004). Nuclear antisense effects in cyclophilin A pre-mRNA splicing by oligonucleotides: A comparison of tricyclo-DNA with LNA. Nucleic acids research, 32(1), pp. 346-353. Oxford University Press 10.1093/nar/gkh187
Liu, Songkai; Asparuhova, Maria; Brondani, Vincent; Ziekau, Ingrid; Klimkait, Thomas; Schümperli, Daniel (2004). Inhibition of HIV-1 multiplication by antisense U7 snRNAs and siRNAs targeting cyclophilin A. Nucleic acids research, 32(12), pp. 3752-3759. Oxford University Press 10.1093/nar/gkh715
Schümperli, Daniel; Pillai, R S (2004). The special Sm core structure of the U7 snRNP: far-reaching significance of a small nuclear ribonucleoprotein. Cellular and molecular life sciences, 61(19-20), pp. 2560-2570. Birkhäuser-Verlag; www.birkhauser.ch 10.1007/s00018-004-4190-0
Asparuhova, Maria B.; Kole, Ryszard; Schümperli, Daniel (2004). Antisense derivatives of U7 and other small nuclear RNAs as tools to modify pre-mRNA splicing patterns. Gene Therapy and Regulation, 2(4), pp. 321-349. VSP International Science Publishers 10.1163/1568558043967472
Azzouz, Teldja N; Schümperli, Daniel (2003). Evolutionary conservation of the U7 small nuclear ribonucleoprotein in Drosophila melanogaster. RNA - a publication of the RNA Society, 9(12), pp. 1532-1541. Cold Spring Harbor Laboratory Press 10.1261/rna.5143303
Pillai, Ramesh S; Grimmler, Matthias; Meister, Gunter; Will, Cindy L; Lührmann, Reinhard; Fischer, Utz; Schümperli, Daniel (2003). Unique Sm core structure of U7 snRNPs: assembly by a specialized SMN complex and the role of a new component, Lsm11, in histone RNA processing. Genes & development, 17(18), pp. 2321-2333. Cold Spring Harbor Laboratory Press 10.1101/gad.274403
Brun, C; Suter, D; Pauli, C; Dunant, P; Lochmüller, H; Burgunder, J M; Schümperli, Daniel; Weis, J (2003). U7 snRNAs induce correction of mutated dystrophin pre-mRNA by exon skipping. Cellular and molecular life sciences, 60(3), pp. 557-566. Springer
Schümperli, Daniel (2002). Megatrends in medicine. In: Leuthold, M.; Leuenberger, H.; Weibel, E.R. (eds.) Megatrends – rise and fall of megatrends in science. Basel: Schwabe
Pettitt, Jonathan; Crombie, Catriona; Schümperli, Daniel; Müller, Berndt (2002). The Caenorhabditis elegans histone hairpin-binding protein is required for core histone gene expression and is essential for embryonic and postembryonic cell division. Journal of cell science, 115(Pt 4), pp. 857-866. Company of Biologists Limited
Zanier, Katia; Luyten, Ingrid; Crombie, Catriona; Muller, Berndt; Schümperli, Daniel; Linge, Jens P; Nilges, Michael; Sattler, Michael (2002). Structure of the histone mRNA hairpin required for cell cycle regulation of histone gene expression. RNA - a publication of the RNA Society, 8(1), pp. 29-46. Cold Spring Harbor Laboratory Press
Renneberg, Dorte; Bouliong, Emilie; Reber, Ulrich; Schümperli, Daniel; Leumann, Christian J. (2002). Antisense properties of tricyclo-DNA. Nucleic acids research, 30(13), pp. 2751-2757. Oxford University Press 10.1093/nar/gkf412
Pillai, R S; Will, C L; Lührmann, R; Schümperli, Daniel; Müller, B (2001). Purified U7 snRNPs lack the Sm proteins D1 and D2 but contain Lsm10, a new 14 kDa Sm D1-like protein. EMBO journal, 20(19), pp. 5470-5479. Nature Publishing Group 10.1093/emboj/20.19.5470
Michel, F; Schümperli, Daniel; Müller, B (2000). Specificities of Caenorhabditis elegans and human hairpin binding proteins for the first nucleotide in the histone mRNA hairpin loop. RNA - a publication of the RNA Society, 6(11), pp. 1539-1550. Cold Spring Harbor Laboratory Press
Martin, F; Michel, F; Zenklusen, D; Müller, B; Schümperli, Daniel (2000). Positive and negative mutant selection in the human histone hairpin-binding protein using the yeast three-hybrid system. Nucleic acids research, 28(7), pp. 1594-1603. Oxford University Press 10.1093/nar/28.7.1594
Suter, Daniel; Tomasini, Reto; Reber, Ueli; Gorman, Linda; Kole, Ryszard; Schümperli, Daniel (1999). Double-target antisense U7 snRNAs promote efficient skipping of an aberrant exon in three human β-thalassemic mutations. Human molecular genetics, 8(13), pp. 2415-2423. Oxford University Press 10.1093/hmg/8.13.2415
Sierakowska, H; Sambade, M J; Schümperli, Daniel; Kole, R (1999). Sensitivity of splice sites to antisense oligonucleotides in vivo. RNA - a publication of the RNA Society, 5(3), pp. 369-377. Cold Spring Harbor Laboratory Press
Walther, T N; Wittop Koning, T H; Schümperli, Daniel; Müller, B (1998). A 5'-3' exonuclease activity involved in forming the 3' products of histone pre-mRNA processing in vitro. RNA - a publication of the RNA Society, 4(9), pp. 1034-1046. Cold Spring Harbor Laboratory Press
Gorman, L; Suter, D; Emerick, V; Schümperli, Daniel; Kole, R (1998). Stable alteration of pre-mRNA splicing patterns by modified U7 small nuclear RNAs. Proceedings of the National Academy of Sciences of the United States of America - PNAS, 95(9), pp. 4929-4934. National Academy of Sciences NAS
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