Graduate School for Cellular and Biomedical Sciences (GCB)

2021

Balmer, Pierre; Hariton, William V. J.; Sayar, Beyza; Jagannathan, Vidhya; Galichet, Arnaud; Leeb, Tosso; Roosje, Petra; Müller, Eliane Jasmine (2021). SUV39H2 epigenetic silencing controls fate conversion of epidermal stem and progenitor cells. Journal of cell biology, 220(4) Rockefeller Institute Press 10.1083/jcb.201908178

Hoefemann, Maike; Döring, André; Fichtner, Nicole Damara; Kreis, Roland (2021). Combining chemical exchange saturation transfer and 1 H magnetic resonance spectroscopy for simultaneous determination of metabolite concentrations and effects of magnetization exchange. Magnetic resonance in medicine, 85(4), pp. 1766-1782. Wiley-Liss 10.1002/mrm.28574

Gerpe, C.; Stratmann, A.; Bruckmaier, R.; Toscano, M. J. (2021). Examining the catching, carrying, and crating process during depopulation of end-of-lay hens. Journal of applied poultry research, 30(1), p. 100115. Elsevier 10.1016/j.japr.2020.100115

Cristodero, Marina; Brogli, Rebecca; Joss, Oliver; Schimanski, Bernd; Schneider, André; Polacek, Norbert (2021). tRNA 3' shortening by LCCR4 as a response to stress in Trypanosoma brucei. Nucleic acids research, 49(3), pp. 1647-1661. Oxford University Press 10.1093/nar/gkaa1261

Gawliczek, Tom; Guignard, Jérémie; Schmid, Christoph; Wimmer, Wilhelm; Caversaccio, Marco; Kompis, Martin; Weder, Stefan (2021). Using a cochlear implant processor as contralateral routing of signals device in unilateral cochlear implant recipients (In Press). European archives of oto-rhino-laryngology Springer 10.1007/s00405-021-06684-x

Bosch-Guiteras, Núria; Uroda, Tina; Guillen-Ramirez, Hugo A.; Riedo, Rahel; Gazdhar, Amiq; Esposito, Roberta; Pulido-Quetglas, Carlos; Zimmer, Yitzhak; Medová, Michaela; Johnson, Rory (2021). Enhancing CRISPR deletion via pharmacological delay of DNA-PKcs. (In Press). Genome research Cold Spring Harbor, N.Y 10.1101/gr.265736.120

Raad, Nicole; Luidalepp, Hannes; Fasnacht, Michel; Polacek, Norbert (2021). Transcriptome-Wide Analysis of Stationary Phase Small ncRNAs in E. coli. International journal of molecular sciences, 22(4), p. 1703. MDPI 10.3390/ijms22041703

Luginbühl, Marc; Young, Reuben S E; Stöth, Frederike; Weinmann, Wolfgang; Blanksby, Stephen J; Gaugler, Stefan (2021). Variation in the relative isomer abundance of synthetic and biologically derived phosphatidylethanols and its consequences for reliable quantification. Journal of analytical toxicology, 45(1), pp. 76-83. Oxford University Press 10.1093/jat/bkaa034

Özen, Özhan; Buetler, Karin A.; Marchal-Crespo, Laura (2021). Promoting Motor Variability During Robotic Assistance Enhances Motor Learning of Dynamic Tasks. Frontiers in neuroscience, 14 Frontiers Research Foundation 10.3389/fnins.2020.600059

Ruffieux, Yann; Muchengeti, Mazvita; Egger, Matthias; Efthimiou, Orestis; Bartels, Lina; Olago, Victor; Davidović, Maša; Dhokotera, Tafadzwa; Bohlius, Julia; Singh, Elvira; Rohner, Eliane (2021). Immunodeficiency and Cancer in 3.5 Million People Living with Human Immunodeficiency Virus: the South African HIV Cancer Match Study. (In Press). Clinical infectious diseases Oxford University Press 10.1093/cid/ciab087

Muchengeti, Mazvita; Bohlius, Julia; Dhokotera, Tafadzwa G (2021). Conjunctival cancer in people living with HIV. Current opinion in infectious diseases, 34(1), pp. 1-7. Wolters Kluwer Lippincott Williams & Wilkins 10.1097/QCO.0000000000000705

Amrein, M. A.; Bührer, E. D.; Amrein, M. L.; Li, Q.; Rothschild, S.; Riether, C.; Jaggi, R.; Savic-Prince, S.; Bubendorf, L.; Gautschi, O.; Ochsenbein, A. (2021). Chemotherapy negatively impacts the tumor immune microenvironment in NSCLC: an analysis of pre- and post-treatment biopsies in the multi-center SAKK19/09 study. Cancer immunology, immunotherapy : CII, 70(2), pp. 405-415. Springer 10.1007/s00262-020-02688-4

Goutaki, Myrofora; Crowley, Suzanne; Dehlink, Eleonora; Gaupmann, René; Horton, Katie L; Kouis, Panayiotis; Lam, Yin Ting; Loges, Niki T; Lucas, Jane S; Roehmel, Jobst F; Shoemark, Amelia (2021). The BEAT-PCD (Better Experimental Approaches to Treat Primary Ciliary Dyskinesia) Clinical Research Collaboration [editorial]. European respiratory journal, 57(2), p. 2004601. European Respiratory Society 10.1183/13993003.04601-2020

Bevkal, Shubha; Naguleswaran, Arunasalam; Rehmann, Ruth; Kaiser, Marcel; Heller, Manfred; Roditi, Isabel (2021). An Alba-domain protein required for proteome remodelling during trypanosome differentiation and host transition. PLoS pathogens, 17(1), e1009239. Public Library of Science 10.1371/journal.ppat.1009239

Casari, Daniele; Michler, Johann; Zysset, Philippe; Schwiedrzik, Jakob (2021). Microtensile properties and failure mechanisms of cortical bone at the lamellar level. Acta biomaterialia, 120, pp. 135-145. Elsevier 10.1016/j.actbio.2020.04.030

Räsänen, Markus; Sultan, Ibrahim; Paech, Jennifer; Hemanthakumar, Karthik Amudhala; Yu, Wei; He, Liqun; Tang, Juan; Sun, Ying; Hlushchuk, Ruslan; Huang, Xiuzhen; Armstrong, Emma; Khoma, Oleksiy-Zakhar; Mervaala, Eero; Djonov, Valentin; Betsholtz, Christer; Zhou, Bin; Kivelä, Riikka; Alitalo, Kari (2021). VEGF-B Promotes Endocardium-Derived Coronary Vessel Development and Cardiac Regeneration. Circulation, 143(1), pp. 65-77. American Heart Association 10.1161/CIRCULATIONAHA.120.050635

Sandu, Raluca M.; Paolucci, Iwan; Ruiter, Simeon J.; Sznitman, Raphael; de Jong, Koert; Freedman, Jacob; Weber, Stefan; Tinguely, Pascale (2021). Volumetric Quantitative Ablation Margins for Assessment of Ablation Completeness in Thermal Ablation of Liver Tumours (In Press). Frontiers in oncology Frontiers Research Foundation 10.3389/fonc.2021.623098

Bindschedler, Annina; Wacker, Rahel; Egli, Jessica; Eickel, Nina; Schmuckli-Maurer, Jacqueline; Franke-Fayard, Blandine M; Janse, Chris J; Heussler, Volker T. (2021). Plasmodium berghei sporozoites in nonreplicative vacuoles are eliminated by a PI3P-mediated autophagy-independent pathway. Cellular microbiology, 23(1), e13271. Wiley 10.1111/cmi.13271

Pedersen, Eva SL; Ardura Garcia, Cristina; de Jong, Carmen CM; Jochmann, Anja; Moeller, Alexander; Mueller-Suter, Dominik; Regamey, Nicolas; Singer, Florian; Goutaki, Myrofora; Kuehni, Claudia E (2021). Diagnosis in children with exercise-induced respiratory symptoms: a multi-centre study. Pediatric pulmonology, 56(1), pp. 217-225. Wiley-Blackwell 10.1002/ppul.25126

Jungo, Alain; Scheidegger, Olivier; Reyes, Mauricio; Balsiger, Fabian (2021). pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis. Computer methods and programs in biomedicine, 198, p. 105796. Elsevier 10.1016/j.cmpb.2020.105796

Frauchiger, Bettina S.; Carlens, Julia; Herger, Andreas; Moeller, Alexander; Latzin, Philipp; Ramsey, Kathryn A. (2021). Multiple breath washout quality control in the clinical setting. Pediatric pulmonology, 56(1), pp. 105-112. Wiley-Blackwell 10.1002/ppul.25119

Letko, Anna; Strugnell, Ben; Häfliger, Irene M.; Paris, Julia M.; Waine, Katie; Drögemüller, Cord; Scholes, Sandra (2021). Compound heterozygous PLA2G6 loss-of-function variants in Swaledale sheep with neuroaxonal dystrophy. Molecular genetics and genomics : MGG, 296(1), pp. 235-242. Springer 10.1007/s00438-020-01742-1

Kochetkova, Tatiana; Peruzzi, Cinzia; Braun, Oliver; Overbeck, Jan; Maurya, Anjani K.; Neels, Antonia; Calame, Michel; Michler, Johann; Zysset, Philippe; Schwiedrzik, Jakob (2021). Combining polarized Raman spectroscopy and micropillar compression to study microscale structure-property relationships in mineralized tissues. Acta biomaterialia, 119, pp. 390-404. Elsevier 10.1016/j.actbio.2020.10.034

Bigler, Marius Reto; Stoller, Michael; Praz, Fabien; Siontis, George C M; Grossenbacher, Raphael; Tschannen, Christine; Seiler, Christian (2021). Functional assessment of myocardial ischaemia by intracoronary ECG. Open Heart, 8(1) B M J Group 10.1136/openhrt-2020-001447

Van Voorhis, Wesley C; Hulverson, Matthew A; Choi, Ryan; Huang, Wenlin; Arnold, Samuel L M; Schaefer, Deborah A; Betzer, Dana P; Vidadala, Rama S R; Lee, Sangun; Whitman, Grant R; Barrett, Lynn K; Maly, Dustin J; Riggs, Michael W; Fan, Erkang; Kennedy, Thomas J; Tzipori, Saul; Doggett, J Stone; Winzer, Pablo; Anghel, Nicoleta; Imhof, Dennis; ... (2021). One health therapeutics: Target-Based drug development for cryptosporidiosis and other apicomplexa diseases. Veterinary parasitology, 289, p. 109336. Elsevier 10.1016/j.vetpar.2020.109336

Liu, Yuanzhen; Han, Wensu; Gao, Jinglin; Su, Songkun; Beaurepaire, Alexis; Yanez, Orlando; Neumann, Peter (2021). Out of Africa: novel source of small hive beetles infesting Eastern and Western honey bee colonies in China. Journal of apicultural research, 60(1), pp. 108-110. Taylor & Francis 10.1080/00218839.2020.1816686

April-Monn, Simon Leonhard; Wiedmer, Tabea; Skowronska, Magdalena; Maire, Renaud; Schiavo Lena, Marco; Trippel, Mafalda; Di Domenico, Annunziata; Muffatti, Francesca; Andreasi, Valentina; Capurso, Gabriele; Doglioni, Claudio; Kim-Fuchs, Corina; Gloor, Beat; Zatelli, Maria Chiara; Partelli, Stefano; Falconi, Massimo; Perren, Aurel; Marinoni, Ilaria (2021). 3D Primary Cell Culture: A Novel Preclinical Model For Pancreatic Neuroendocrine Tumors (PanNETs). Neuroendocrinology, 111(3), pp. 273-287. Karger 10.1159/000507669

Anderegg, Manuel A.; Albano, Giuseppe; Hanke, Daniela; Deisl, Christine; Uehlinger, Dominik E.; Brandt, Simone; Bhardwaj, Rajesh; Hediger, Matthias A.; Fuster, Daniel G. (2021). The sodium/proton exchanger NHA2 regulates blood pressure through a WNK4-NCC dependent pathway in the kidney. Kidney international, 99(2), pp. 350-363. Elsevier 10.1016/j.kint.2020.08.023

Marques, Ines J.; Sanz-Morejon, Andrés; Mercader, Nadia (2021). Ventricular Cryoinjury as a Model to Study Heart Regeneration in Zebrafish. Methods in molecular biology, 2158, pp. 51-61. Springer 10.1007/978-1-0716-0668-1_5

Bigler, Marius Reto; Zimmermann, Patrick; Papadis, Athanasios; Seiler, Christian (2021). Accuracy of intracoronary ECG parameters for myocardial ischemia detection. Journal of electrocardiology, 64, pp. 50-57. Elsevier 10.1016/j.jelectrocard.2020.11.018

Zeng, Guodong; Schmaranzer, Florian; Degonda, Celia; Gerber, Nicolas; Gerber, Kate; Tannast, Moritz; Burger, Jürgen; Siebenrock, Klaus A.; Zheng, Guoyan; Lerch, Till (2021). MRI-based 3D models of the hip joint enables radiation-free computer-assisted planning of periacetabular osteotomy for treatment of hip dysplasia using deep learning for automatic segmentation. European journal of radiology open, 8, p. 100303. Elsevier 10.1016/j.ejro.2020.100303

Ho, Manh Tin; Lu, Jiongming; Brunssen, Dominique Yvonne; Suter, Beat (2021). An aminoacylation independent activity of PheRS/FARS promotes growth and proliferation. Disease models & mechanisms, dmm.048132. Company of Biologists Ltd. 10.1242/dmm.048132

Zamprogno, Pauline; Wüthrich, Simon; Achenbach, Sven; Thoma, Giuditta; Stucki, Janick D.; Hobi, Nina; Schneider-Daum, Nicole; Lehr, klaus-michael; Huwer, Hanno; Geiser, Thomas; Schmid, Ralph A.; Guenat, Olivier T. (2021). Second-generation lung-on-a-chip with an array of stretchable alveoli made with a biological membrane. Communications biology, 4(1), p. 168. Springer Nature 10.1038/s42003-021-01695-0

Aebischer, Philipp; Caversaccio, Marco; Wimmer, Wilhelm (2021). Fabrication of Human Anatomy-Based Scala Tympani Models with a Hydrophilic Coating for Cochlear Implant Insertion Experiments. Hearing research, 404, p. 108205. Elsevier 10.1016/j.heares.2021.108205

Zhang, Xingshuo; Guerrero, Julien; Croft, Andreas S.; Oswald, Katharina A.C.; Albers, Christoph E.; Häckel, Sonja; Gantenbein, Benjamin (2021). Towards Tissue-Specific Stem Cell Therapy for the Intervertebral Disc: PPARδ Agonist Increases the Yield of Human Nucleus Pulposus Progenitor Cells in Expansion. Surgeries, 2(1), pp. 92-104. MDPI 10.3390/surgeries2010008

Croft, Andreas S.; Guerrero, Julien; Oswald, Katharina A. C.; Häckel, Sonja; Albers, Christoph E.; Gantenbein, Benjamin (2021). Effect of different cryopreservation media on human nucleus pulposus cells' viability and trilineage potential (In Press). JOR Spine Wiley 10.1002/jsp2.1140

Büchler, Philippe; Räber, Jonas; Voumard, Benjamin; Berger, Steve; Bell, Brett; Sutter, Nino; Funariu, Stefan; Hasler, Carol; Studer, Daniel (2021). The Spinebot—A Robotic Device to Intraoperatively Quantify Spinal Stiffness. Journal of medical devices, 15(1) American Society of Mechanical Engineers ASME 10.1115/1.4049915

2020

Schültke, Elisabeth; Bayat, Sam; Bartzsch, Stefan; Bräuer-Krisch, Elke; Djonov, Valentin; Fiedler, Stefan; Fernandez-Palomo, Cristian; Jaekel, Felix; Pellicioli, Paolo; Trappetti, Verdiana; Hildebrandt, Guido (2020). A mouse model for microbeam radiotherapy of the lung (In Press). International journal of radiation oncology, biology, physics Elsevier 10.1016/j.ijrobp.2020.12.030

Frauchiger, Bettina S; Binggeli, Severin; Yammine, Sophie; Spycher, Ben; Krüger, Linn; Ramsey, Kathryn A; Latzin, Philipp (2020). Longitudinal Course of Clinical Lung Clearance Index in Children with Cystic Fibrosis. (In Press). European respiratory journal European Respiratory Society 10.1183/13993003.02686-2020

University of Bern (2020). System for combined hearing and balance tests of a person with moving sound source devices (WO 2020/254462 A1)

Taghavi, Katayoun; Moono, Misinzo; Mwanahamuntu, Mulindi; Basu, Partha; Limacher, Andreas; Tembo, Taniya; Kapesa, Herbert; Hamusonde, Kalongo; Asangbeh, Serra; Sznitman, Raphael; Low, Nicola; Manasyan, Albert; Bohlius, Julia (2020). Screening test accuracy to improve detection of precancerous lesions of the cervix in women living with HIV: a study protocol. BMJ open, 10(12), e037955. BMJ Publishing Group 10.1136/bmjopen-2020-037955

Jacinto, Joana G. P.; Häfliger, Irene M.; Gentile, Arcangelo; Drögemüller, Cord; Bolcato, Marilena (2020). A 6.7 kb deletion in the COL2A1 gene in a Holstein calf with achondrogenesis type II and perosomus elumbis (In Press). Animal genetics Wiley 10.1111/age.13033

Salathé, Marcel; Althaus, Christian L; Anderegg, Nanina; Antonioli, Daniele; Ballouz, Tala; Bugnon, Edouard; Čapkun, Srdjan; Jackson, Dennis; Kim, Sang-Il; Larus, Jim; Low, Nicola; Lueks, Wouter; Menges, Dominik; Moullet, Cédric; Payer, Mathias; Riou, Julien; Stadler, Theresa; Troncoso, Carmela; Vayena, Effy and von Wyl, Viktor (2020). Early evidence of effectiveness of digital contact tracing for SARS-CoV-2 in Switzerland. Swiss medical weekly, 150, w20457. EMH Schweizerischer Ärzteverlag 10.4414/smw.2020.20457

Kaufmann, Brigitte Charlotte; Knobel, Samuel Elia Johannes; Nef, Tobias; Müri, René Martin; Cazzoli, Dario; Nyffeler, Thomas (2020). Visual Exploration Area in Neglect: A new analysis Method for Video-Oculography Data based on Foveal Vision. Frontiers in neurology, 13, p. 1412. Frontiers Media S.A. 10.3389/fnins.2019.01412

Zhang, Xingshuo; Guerrero, Julien; Croft, Andreas S.; Albers, Christoph E.; Häckel, Sonja; Gantenbein, Benjamin (2020). Spheroid-Like Cultures for Expanding Angiopoietin Receptor-1 (aka. Tie2) Positive Cells from the Human Intervertebral Disc. International journal of molecular sciences, 21(24) MDPI 10.3390/ijms21249423

Engeroff, Paul; Plattner, Kevin; Storni, Federico; Storni, Federico; Thoms, Franziska; Frias Boligan, Kayluz; Mürner, Lukas; Eggel, Alexander; von Gunten, Stephan; Bachmann, Martin F.; Vogel, Monique (2020). Glycan-specific IgG anti-IgE autoantibodies are protective against allergic anaphylaxis in a murine model. (In Press). Journal of allergy and clinical immunology Elsevier 10.1016/j.jaci.2020.11.031

Kadzioch, Nicole P.; Gast, Matthieu; Origgi, Francesco; Plattet, Philippe (2020). Clustered Lysine Residues of the Canine Distemper Virus Matrix Protein Regulate Membrane Association and Budding Activity. Journal of virology, 95(1) American Society for Microbiology 10.1128/JVI.01269-20

Yildiz, Soner; Pereira Bonifacio Lopes, João P; Bergé, Matthieu; González-Ruiz, Víctor; Baud, Damian; Kloehn, Joachim; Boal-Carvalho, Inês; Schaeren, Olivier P; Schotsaert, Michael; Hathaway, Lucy J; Rudaz, Serge; Viollier, Patrick H; Hapfelmeier, Siegfried; Francois, Patrice; Schmolke, Mirco (2020). Respiratory tissue-associated commensal bacteria offer therapeutic potential against pneumococcal colonization. eLife, 9 eLife Sciences Publications 10.7554/eLife.53581

Di Domenico, Annunziata; Pipinikas, Christodoulos P; Maire, Renaud S; Bräutigam, Konstantin; Simillion, Cedric; Dettmer, Matthias S; Vassella, Erik; Thirlwell, Chrissie; Perren, Aurel; Marinoni, Ilaria (2020). Epigenetic landscape of pancreatic neuroendocrine tumours reveals distinct cells of origin and means of tumour progression. Communications biology, 3(1), p. 740. Springer Nature 10.1038/s42003-020-01479-y

Garcia, Teresa Maria; Kiener, Sarah; Jagannathan, Vidhya; Russell, Duncan S; Leeb, Tosso (2020). A COL7A1 Variant in a Litter of Neonatal Basset Hounds with Dystrophic Epidermolysis Bullosa. Genes, 11(12), p. 1458. MDPI, Molecular Diversity Preservation International 10.3390/genes11121458

Shikha, Shikha; Huot, Jonathan L.; Schneider, André; Niemann, Moritz (2020). tRNA import across the mitochondrial inner membrane in T. brucei requires TIM subunits but is independent of protein import. Nucleic acids research, 48(21), pp. 12269-12281. Oxford University Press 10.1093/nar/gkaa1098

Paris, J. M.; Letko, A.; Häfliger, I. M.; Ammann, P.; Drögemüller, C. (2020). Ear type in sheep is associated with the MSRB3 locus. Animal genetics, 51(6), pp. 968-972. Wiley 10.1111/age.12994

Rebsamen, Michael; Rummel, Christian; Reyes, Mauricio; Wiest, Roland; McKinley, Richard (2020). Direct cortical thickness estimation using deep learning-based anatomy segmentation and cortex parcellation. Human brain mapping, 41(17), pp. 4804-4814. Wiley-Blackwell 10.1002/hbm.25159

Anderegg, Nanina; Hector, Jonas; Jefferys, Laura F; Burgos-Soto, Juan; Hobbins, Michael A; Ehmer, Jochen; Meier, Lukas; Maathuis, Marloes H; Egger, Matthias (2020). Loss to follow-up correction increased mortality estimates in HIV-positive people on antiretroviral therapy in Mozambique. Journal of clinical epidemiology, 128, pp. 83-92. Elsevier 10.1016/j.jclinepi.2020.08.012

Kucur, Serife Seda; Haeckel, Sebastian; Stapelfeldt, Jan; Odermatt, Jeannine; Iliev, Milko E.; Abegg, Mathias; Sznitman, Raphael; Höhn, René (2020). Comparative study between the SORS and Dynamic Strategy visual field testing methods on glaucomatous and healthy subjects. Translational vision science & technology, 9(13), p. 3. Association for Research in Vision and Ophthalmology 10.1167/tvst.9.13.3

Häfliger, Irene Monika; Agerholm, Jørgen Steen; Drögemüller, Cord (2020). Constitutional trisomy 20 in an aborted Holstein fetus with pulmonary hypoplasia and anasarca syndrome. Animal genetics, 51(6), pp. 988-989. Wiley 10.1111/age.13008

Taghavi, Katayoun; Moono, Misinzo; Asangbeh, Serra; Gillett, Grant; Pascoe, Margaret; Manasyan, Albert (2020). Strengthening global commitment to eliminating cervical cancer: What lessons from the past can we apply to the future? Journal of global health, 10(2), 020385. Edinburgh University Global Health Society 10.7189/jogh.10.020385

Tekari, Adel; Egli, Rainer J.; Schmid, Veit; Justiz, Joern; Luginbuehl, Reto (2020). A novel bioreactor system capable of simulating the in vivo conditions of synovial joints. Tissue engineering. Part C, Methods, 26(12), pp. 617-627. Mary Ann Liebert 10.1089/ten.TEC.2020.0161

Hilty, Markus; Wüthrich, Tsering M.; Godel, Aurélie; Adelfio, Roberto; Aebi, Susanne; Burgener, Sabrina S.; Illgen-Wilcke, Brunhilde; Benarafa, Charaf (2020). Chronic cigarette smoke exposure and pneumococcal infection induce oropharyngeal microbiota dysbiosis and contribute to long-lasting lung damage in mice. Microbial genomics, 6(12) Microbiology Society 10.1099/mgen.0.000485

Schenk, Denis; Mathis, Andrea; Lippuner, Kurt; Zysset, Philippe (2020). In vivo repeatability of homogenized finite element analysis based on multiple HR-pQCT sections for assessment of distal radius and tibia strength. Bone, 141, p. 115575. Elsevier 10.1016/j.bone.2020.115575

Nishihara, Hideaki; Gastfriend, Benjamin D; Soldati, Sasha; Perriot, Sylvain; Mathias, Amandine; Sano, Yasuteru; Shimizu, Fumitaka; Gosselet, Fabien; Kanda, Takashi; Palecek, Sean P; Du Pasquier, Renaud; Shusta, Eric V; Engelhardt, Britta (2020). Advancing human induced pluripotent stem cell-derived blood-brain barrier models for studying immune cell interactions. FASEB journal, 34(12), pp. 16693-16715. Federation of American Societies for Experimental Biology 10.1096/fj.202001507RR

Wang, Zizun; Vermij, Sarah H.; Sottas, Valentin; Shestak, Anna; Ross-Kaschitza, Daniela; Zaklyazminskaya, Elena V; Hudmon, Andy; Pitt, Geoffrey S; Rougier, Jean-Sébastien; Abriel, Hugues (2020). Calmodulin binds to the N-terminal domain of the cardiac sodium channel Nav1.5. Channels, 14(1), pp. 268-286. Taylor & Francis 10.1080/19336950.2020.1805999

Letko, Anna; Minor, Katie M; Friedenberg, Steven G; Shelton, G Diane; Salvador, Jill Pesayco; Mandigers, Paul J J; Leegwater, Peter A J; Winkler, Paige A; Petersen-Jones, Simon M; Stanley, Bryden J; Ekenstedt, Kari J; Johnson, Gary S; Hansen, Liz; Jagannathan, Vidya; Mickelson, James R; Drögemüller, Cord (2020). A CNTNAP1 Missense Variant Is Associated with Canine Laryngeal Paralysis and Polyneuropathy. Genes, 11(12) MDPI, Molecular Diversity Preservation International 10.3390/genes11121426

Holwerda, Melle; V'kovski, Philip; Wider, Manon; Thiel, Volker; Dijkman, Ronald (2020). Identification of an Antiviral Compound from the Pandemic Response Box that Efficiently Inhibits SARS-CoV-2 Infection In Vitro. Microorganisms, 8(12) MDPI 10.3390/microorganisms8121872

Nguyen, Lien; Laboissonniere, Lauren A; Guo, Shu; Pilotto, Federica; Scheidegger, Olivier; Oestmann, Angelina; Hammond, Jennetta W; Li, Herman; Hyysalo, Anu; Peltola, Roosa; Pattamatta, Amrutha; Zu, Tao; Voutilainen, Merja H; Gelbard, Harris A; Saxena, Smita; Ranum, Laura P W (2020). Survival and Motor Phenotypes in FVB C9-500 ALS/FTD BAC Transgenic Mice Reproduced by Multiple Labs. Neuron, 108(4), 784-796.e3. Cell Press 10.1016/j.neuron.2020.09.009

Otth, Maria; Schindera, Christina; Güngör, Tayfun; Ansari, Marc; Scheinemann, Katrin; Belle, Fabiën N; Latzin, Philipp; von der Weid, Nicolas; Kuehni, Claudia E (2020). Transplant characteristics and self-reported pulmonary outcomes in Swiss childhood cancer survivors after hematopoietic stem cell transplantation-a cohort study. (In Press). Bone marrow transplantation Nature Publishing Group 10.1038/s41409-020-01137-1

Otth, Maria; Greiner-Lang, Jeanette; Scheinemann, Katrin (2020). [Integrative medicine in pediatric oncology]. Revue médicale suisse, 16(716), pp. 2293-2296. Médecine & Hygiène

Seiler, Theo G.; Komninou, Maria Angeliki; Nambiar, Malavika H.; Schürch, Kaspar; Frueh, Beatrice E.; Büchler, Philippe (2020). Oxygen kinetics during corneal crosslinking with and without supplementary oxygen. (In Press). American journal of ophthalmology, 223, pp. 368-376. Elsevier Science 10.1016/j.ajo.2020.11.001

Chippalkatti, Rohan; Egger, Boris; Suter, Beat (2020). Mms19 promotes spindle microtubule assembly in Drosophila neural stem cells. PLoS genetics, 16(11), e1008913. Public Library of Science 10.1371/journal.pgen.1008913

Letko, Anna; Minor, Katie M; Jagannathan, Vidhya; Seefried, Franz R; Mickelson, James R; Oliehoek, Pieter; Drögemüller, Cord (2020). Correction to: Genomic diversity and population structure of the Leonberger dog breed. Genetics, selection, evolution, 52(1), p. 70. BioMed Central 10.1186/s12711-020-00590-2

Taghavi, Katayoun; Rohner, Eliane; Basu, Partha; Low, Nicola; Rutjes, Anne; Bohlius, Julia (2020). Screening test accuracy of portable devices that can be used to perform colposcopy for detecting CIN2+ in low- and middle-income countries: a systematic review and meta-analysis. BMC women's health, 20(1), p. 253. BioMed Central 10.1186/s12905-020-01121-3

Leborgne, Nathan G. F.; Taddeo, Adriano; Freigang, Stefan; Benarafa, Charaf (2020). Serpinb1a Is Dispensable for the Development and Cytokine Response of Invariant Natural Killer T Cell Subsets. Frontiers in immunology, 11, p. 562587. Frontiers Research Foundation 10.3389/fimmu.2020.562587

Brandl, Fabian; Busslinger, Sarah; Zangemeister-Wittke, Uwe; Plückthun, Andreas (2020). Optimizing the anti-tumor efficacy of protein-drug conjugates by engineering the molecular size and half-life. Journal of controlled release, 327, pp. 186-197. Elsevier 10.1016/j.jconrel.2020.08.004

Renner, Henrik; Grabos, Martha; Becker, Katharina J; Kagermeier, Theresa E; Wu, Jie; Otto, Mandy; Peischard, Stefan; Zeuschner, Dagmar; TsyTsyura, Yaroslav; Disse, Paul; Klingauf, Jürgen; Leidel, Sebastian A; Seebohm, Guiscard; Schöler, Hans R; Bruder, Jan M (2020). A fully automated high-throughput workflow for 3D-based chemical screening in human midbrain organoids. eLife, 9 eLife Sciences Publications 10.7554/eLife.52904

de Jong, Carmen CM.; Pedersen, Eva SL.; Mozun, Rebeca; Müller-Suter, Dominik; Jochmann, Anja; Singer, Florian; Casaulta, Carmen; Regamey, Nicolas; Moeller, Alexander; Ardura-Garcia, Cristina; Kuehni, Claudia E (2020). Diagnosis of asthma in children: findings from the Swiss Paediatric Airway Cohort. European respiratory journal, 56(5), p. 2000132. European Respiratory Society 10.1183/13993003.00132-2020

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Becsek, Barna; Pietrasanta, Leonardo; Obrist, Dominik (2020). Turbulent Systolic Flow Downstream of a Bioprosthetic Aortic Valve: Velocity Spectra, Wall Shear Stresses, and Turbulent Dissipation Rates. Frontiers in physiology, 11 Frontiers Research Foundation 10.3389/fphys.2020.577188

Bailoo, Jeremy D.; Voelkl, Bernhard; Varholick, Justin; Novak, Janja; Murphy, Eimear; Rosso, Marianna; Palme, Rupert; Würbel, Hanno (2020). Effects of weaning age and housing conditions on phenotypic differences in mice. Scientific reports, 10(1), p. 11684. Springer Nature 10.1038/s41598-020-68549-3

Cismaru, Anca Liliana; Grimm, Livia; Rudin, Deborah; Ibañez, Luisa; Liakoni, Evangelia; Bonadies, Nicolas; Kreutz, Reinhold; Hallberg, Pär; Wadelius, Mia; Haschke, Manuel; Largiadèr, Carlo R.; Amstutz, Ursula (2020). High-Throughput Sequencing to Investigate Associations Between HLA Genes and Metamizole-Induced Agranulocytosis. Frontiers in genetics, 11(951), p. 951. Frontiers Media SA 10.3389/fgene.2020.00951

Fernandez-Palomo, Cristian; Fazzari, Jennifer; Trappetti, Verdiana; Smyth, Lloyd; Janka, Heidrun; Laissue, Jean; Djonov, Valentin Georgiev (2020). Animal Models in Microbeam Radiation Therapy: A Scoping Review. Cancers, 12(3) MDPI AG 10.3390/cancers12030527

Fernandez Palomo, Cristian; Trappetti, Verdiana; Potez, Marine; Pellicioli, Paolo; Krisch, Michael; Laissue, Jean; Djonov, Valentin (2020). Complete Remission of Mouse Melanoma after Temporally Fractionated Microbeam Radiotherapy. Cancers, 12(9) MDPI AG 10.3390/cancers12092656

Fischer, Tim Alois; Caversaccio, Marco; Wimmer, Wilhelm (2020). Multichannel acoustic source and image dataset for the cocktail party effect in hearing aid and implant users. Scientific data, 7(1), p. 440. Nature Publishing Group 10.1038/s41597-020-00777-8

Gantenbein, Benjamin; Tang, Shirley; Guerrero, Julien; Higuita-Castro, Natalia; Salazar-Puerta, Ana I; Croft, Andreas S.; Gazdhar, Amiq; Purmessur, Devina (2020). Non-viral Gene Delivery Methods for Bone and Joints. Frontiers in Bioengineering and Biotechnology, 8, p. 598466. Frontiers Media 10.3389/fbioe.2020.598466

Gultom, Mitra; Laloli, Laura; Dijkman, Ronald (2020). Well-Differentiated Primary Mammalian Airway Epithelial Cell Cultures. In: Maier, Helena J.; Bickerton, Erica (eds.) Coronaviruses. Methods and Protocols. Methods in Molecular Biology: Vol. 2203 (pp. 119-134). Humana, New York, NY 10.1007/978-1-0716-0900-2_10

van den Oever, A.C.M.; Candelotto, L.; Kemp, B.; Rodenburg, T.B.; Bolhuis, J.E.; Graat, E.A.M.; van de Ven, L.J.F.; Guggisberg, D.; Toscano, M. J. (2020). Influence of a raised slatted area in front of the nest on leg health, mating behaviour and floor eggs in broiler breeders. Animal, p. 100109. Cambridge University Press 10.1016/j.animal.2020.100109

Rufener, Christina; Rentsch, Ana K.; Stratmann, Ariane; Toscano, Michael J. (2020). Perch Positioning Affects both Laying Hen Locomotion and Forces Experienced at the Keel. Animals, 10(7), p. 1223. MDPI 10.3390/ani10071223

Burda, Paul-Christian; Bisio, Hugo; Marq, Jean-Baptiste; Soldati-Favre, Dominique; Heussler, Volker (2020). CRISPR/Cas9-Based Knockout of GNAQ Reveals Differences in Host Cell Signaling Necessary for Egress of Apicomplexan Parasites. mSphere, 5(6) American Society for Microbiology 10.1128/mSphere.01001-20

Gähwiler, Sarah; Bremhorst, Annika; Tóth, Katinka; Riemer, Stefanie (2020). Fear expressions of dogs during New Year fireworks: a video analysis. Scientific reports, 10(1), p. 16035. Springer Nature 10.1038/s41598-020-72841-7

Braconnier, Michèle; Munari, Chiara; Gómez, Yamenah; Gebhardt, Sabine (2020). Grouping of breeding rabbit does at different time points: effects on fertility, mortality and weight. World rabbit science, 28(2), p. 73. Universitat Politècnica de València 10.4995/wrs.2020.13107

Winzer, Pablo; Imhof, Dennis; Anghel, Nicoleta; Ritler, Dominic; Müller, Joachim; Boubaker, Ghalia; Aguado-Martinez, Adriana; Ortega-Mora, Luis-Miguel; Ojo, Kayode K; VanVoorhis, Wesley C; Hemphill, Andrew (2020). The Impact of BKI-1294 Therapy in Mice Infected With the Apicomplexan Parasite Neospora caninum and Re-infected During Pregnancy. Frontiers in veterinary science, 7, p. 587570. Frontiers Media 10.3389/fvets.2020.587570

Eberhard, Naja; Balmer, Vreni; Müller, Joachim; Müller, Norbert; Winter, Rolf; Pou, Soviti; Nilsen, Aaron; Riscoe, Mike; Francisco, Samuel; Leitao, Alexandre; Doggett, J Stone; Hemphill, Andrew (2020). Activities of Endochin-Like Quinolones Against in vitro Cultured Besnoitia besnoiti Tachyzoites. Frontiers in veterinary science, 7, p. 96. Frontiers Media 10.3389/fvets.2020.00096

2019

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Bittner, Aniela; Ducray, Angélique Dominique; Stoffel, Michael Hubert; Felser, Andrea; Mevissen, Meike (2019). Polymer-coated nanoparticles and their effects on mitochondrial function in brain endothelial cells. Toxicology and Applied Pharmacology, 385, p. 114800. Elsevier 10.1016/j.taap.2019.114800

Johnson, Leigh F; Anderegg, Nanina; Zaniewski, Elizabeth; Eaton, Jeffrey W; Rebeiro, Peter F; Carriquiry, Gabriela; Nash, Denis; Yotebieng, Marcel; Ekouevi, Didier K; Holmes, Charles B; Choi, Jun Y; Jiamsakul, Awachana; Bakoyannis, Giorgos; Althoff, Keri N; Sohn, Annette H; Yiannoutsos, Constantin; Egger, Matthias (2019). Global variations in mortality in adults after initiating antiretroviral treatment: an updated analysis of the International epidemiology Databases to Evaluate AIDS cohort collaboration. AIDS, 33 Suppl 3, S283-S294. Lippincott Williams & Wilkins 10.1097/QAD.0000000000002358

Reber, Emilie; Friedli, Natalie; Vasiloglou, Maria; Schuetz, Philipp; Stanga, Zeno (2019). Management of Refeeding Syndrome in Medical Inpatients. Journal of clinical medicine, 8(12) MDPI 10.3390/jcm8122202

Zolfaghari, Hadi; Obrist, Dominik (2019). Absolute instability of impinging leading edge vortices in a submodel of a bileaflet mechanical heart valve. Physical review fluids, 4(12) American Physical Society 10.1103/PhysRevFluids.4.123901

Akarsu, Hatice; Aguilar-Bultet, Lisandra; Falquet, Laurent (2019). deltaRpkm: an R package for a rapid detection of differential gene presence between related bacterial genomes. BMC bioinformatics, 20(1), p. 621. BioMed Central 10.1186/s12859-019-3234-2

Steuri, Noah; Siebke, Inga; Furtwängler, Anja; Szidat, Sönke; Krause, Johannes; Lösch, Sandra; Hafner, Albert (2019). Multiple radiocarbon dating of human remains: clarifying the chronology and sequences of burials in the late Neolithic dolmen of Oberbipp (Switzerland). Radiocarbon, 61(6), pp. 1697-1709. Arizona Board of Regents, University of Arizona 10.1017/RDC.2019.96

de Jong, Carmen C M; Pedersen, Eva S L; Mozún, Rebeca; Goutaki, Myrofora; Trachsel, Daniel; Barben, Juerg; Kuehni, Claudia E (2019). Diagnosis of asthma in children: the contribution of a detailed history and test results. European respiratory journal, 54(6), p. 1901326. European Respiratory Society 10.1183/13993003.01326-2019

Eichenberger, Claudia; Oeljeklaus, Silke; Bruggisser, Julia Maria; Mani, Jan; Haenni, Beat; Kaurov, Iosif; Niemann, Moritz; Zuber, Benoît; Lukeš, Julius; Hashimi, Hassan; Warscheid, Bettina; Schimanski, Bernd; Schneider, André (2019). The highly diverged trypanosomal MICOS complex is organized in a non‐essential integral membrane and an essential peripheral module. Molecular microbiology, 112(6), pp. 1731-1743. Wiley 10.1111/mmi.14389

Schädeli, David Lukas; Serricchio, Mauro; Ben Hamidane, Hisham; Loffreda, Alessio; Hemphill, Andrew; Beneke, Tom; Gluenz, Eva; Graumann, Johannes; Bütikofer, Peter (2019). Cardiolipin depletion-induced changes in the Trypanosoma brucei proteome. FASEB journal, 33(12), pp. 13161-13175. Federation of American Societies for Experimental Biology 10.1096/fj.201901184RR

Hug, Petra; Jude, R; Henkel, Jan Wolfgang; Jagannathan, Vidya; Leeb, Tosso (2019). A novel KIT deletion variant in a German Riding Pony with white-spotting coat colour phenotype. Animal genetics, 50(6), pp. 761-763. Wiley 10.1111/age.12840

Hargreaves, James; Dalal, Shona; Rice, Brian; Anderegg, Nanina; Bhattacharjee, Parinita; Gafos, Mitzy; Hensen, Bernadette; Mangenah, Collin; Quaife, Matthew; Padian, Nancy (2019). Repositioning Implementation Science in the HIV Response: Looking Ahead From AIDS 2018. Journal of acquired immune deficiency syndromes JAIDS, 82 Suppl 3, S299-S304. Lippincott Williams & Wilkins 10.1097/QAI.0000000000002209

Henkel, Jan; Saif, Rashid; Jagannathan, Vidya; Schmocker, Corinne; Zeindler, Flurina; Bangerter, Erika; Herren, Ursula; Posantzis, Dimitris; Bulut, Zafer; Ammann, Philippe; Drögemüller, Cord; Flury, Christine; Leeb, Tosso (2019). Selection signatures in goats reveal copy number variants underlying breed-defining coat color phenotypes. PLoS genetics, 15(12), e1008536. Public Library of Science 10.1371/journal.pgen.1008536

Piffaretti, Deborah; Burgio, Floriana; Thelen, Marcus; Kaelin-Lang, Alain; Paganetti, Paolo; Reinert, Michael; D'Angelo, Maria Luisa (2019). Protoporphyrin IX tracer fluorescence modulation for improved brain tumor cell lines visualization. Journal of photochemistry and photobiology. B, Biology, 201, p. 111640. Elsevier 10.1016/j.jphotobiol.2019.111640

Counotte, Michel J; Althaus, Christian L; Low, Nicola; Riou, Julien (2019). Impact of age-specific immunity on the timing and burden of the next Zika virus outbreak. PLoS neglected tropical diseases, 13(12), e0007978. Public Library of Science 10.1371/journal.pntd.0007978

Hernandez Fillor, Rosa Elena; Brilhante, Michael; Espinosa, Ivette; Perreten, Vincent (2019). Complete Circular Genome Sequence of a Multidrug-Resistant Escherichia coli Strain from Cuba Obtained with Nanopore and Illumina Hybrid Assembly. Microbiology resource announcements, 8(48) American Society for Microbiology 10.1128/MRA.01269-19

Botros, Angela; Schütz, Narayan; Camenzind, Martin; Urwyler, Prabitha; Bolliger, Daniel; Vanbellingen, Tim; Kistler, Rolf; Bohlhalter, Stephan; Müri, René M.; Mosimann, Urs P.; Nef, Tobias (2019). Long-Term Home-Monitoring Sensor Technology in Patients with Parkinson's Disease-Acceptance and Adherence. Sensors, 19(23) Molecular Diversity Preservation International MDPI 10.3390/s19235169

Sandu, Raluca-Maria; Paolucci, Iwan; Tinguely, Pascale Marie Pia; Weber, Stefan; Freedman, Jacob (22 November 2019). Quantitative Volumetric Assessment of CT-guided Ablation Treatments for Colorectal Liver Metastases (Unpublished). In: IEEE Engineering in Medicine and Biology Society's International Student Conference 2019 (IEEE EMBS ISC 2019). Magdeburg, Germany. 22 Nov - 24 Nov 2019.

Döring, André; Kreis, Roland (2019). Magnetic resonance spectroscopy extended by oscillating diffusion gradients: Cell-specific anomalous diffusion as a probe for tissue microstructure in human brain. NeuroImage, 202, p. 116075. Elsevier 10.1016/j.neuroimage.2019.116075

Troxler, Lukas J.; Werren, Joel P.; Schaffner, Thierry O.; Mostacci, Nadezda; Vermathen, Peter; Vermathen, Martina; Wüthrich, Daniel; Simillion, Cedric; Brugger, Silvio D.; Bruggmann, Rémy; Hathaway, Lucy J.; Furrer, Julien; Hilty, Markus (2019). Carbon source regulates polysaccharide capsule biosynthesis in Streptococcus pneumoniae. Journal of biological chemistry, 294(46), pp. 17224-17238. American Society for Biochemistry and Molecular Biology 10.1074/jbc.RA119.010764

Reber, Emilie; Gomes, Filomena; Dähn, Ilka A.; Vasiloglou, Maria F.; Stanga, Zeno (2019). Management of Dehydration in Patients Suffering Swallowing Difficulties. Journal of Clinical Medicine, 8(11) MDPI 10.3390/jcm8111923

Thoo, Lester; Noti, Mario; Krebs, Philippe (2019). Keep calm: the intestinal barrier at the interface of peace and war. Cell death & disease, 10(849), pp. 1-13. Springer Nature 10.1038/s41419-019-2086-z

de Jong, Carmen CM; Mozun, R (2019). The reference standard in diagnostic studies on childhood asthma [correspondence]. Respiratory medicine, 160, p. 105812. Elsevier 10.1016/j.rmed.2019.105812

Liechti, Nicole; Schürch, Nadia; Bruggmann, Rémy; Wittwer, Matthias (2019). Nanopore sequencing improves the draft genome of the human pathogenic amoeba Naegleria fowleri. Scientific reports, 9(16040), pp. 1-10. Springer Nature 10.1038/s41598-019-52572-0

Hermann, Jan; Müller, Fabian; O'Toole Bom Braga, Gabriela; Weber, Stefan; Schneider, Daniel (4 November 2019). Image-guidance and robotic technology to support surgery on the lateral skull base (In Press). In: Image-Guided Interventions Conference.

Sun, Qingnan; Jankovic, Marko; Budzinski, João; Moore, Brett; Diem, Peter; Stettler, Christoph; Mougiakakou, Stavroula (2019). A dual mode adaptive basal-bolus advisor based on reinforcement learning. IEEE journal of biomedical and health informatics, 23(6), pp. 2633-2641. Institute of Electrical and Electronics Engineers 10.1109/JBHI.2018.2887067

Diez-Fernandez, Carmen; Hertig, Damian; Loup, Marc; Diserens, Gaëlle; Henry, Hugues; Vermathen, Peter; Nuoffer, Jean-Marc; Häberle, Johannes; Braissant, Olivier (2019). Argininosuccinate neurotoxicity and prevention by creatine in argininosuccinate lyase deficiency: an in vitro study in rat 3D organotypic brain cell cultures. Journal of inherited metabolic disease, 42(6), pp. 1077-1087. Wiley 10.1002/jimd.12090

Höfemann, Maike Svenja; Adalid López, Víctor Javier; Kreis, Roland (2019). Optimizing acquisition and fitting conditions for 1 H MR spectroscopy investigations in global brain pathology. NMR in biomedicine, 32(11), e4161. Wiley Interscience 10.1002/nbm.4161

Neubauer, Jacqueline; Wang, Zizun; Rougier, Jean-Sébastien; Abriel, Hugues; Rieubland, Claudine; Bartholdi, Deborah; Haas, Cordula; Medeiros-Domingo, Argelia (2019). Functional characterization of a novel SCN5A variant associated with long QT syndrome and sudden cardiac death. International journal of legal medicine, 133(6), pp. 1733-1742. Springer 10.1007/s00414-019-02141-x

Lerch, Till D.; Boschung, Adam; Todorski, Inga A. S.; Steppacher, Simon D.; Schmaranzer, Florian; Zheng, Guoyan; Ryan, Michael K; Siebenrock, Klaus A.; Tannast, Moritz (2019). Femoroacetabular Impingement Patients With Decreased Femoral Version Have Different Impingement Locations and Intra- and Extraarticular Anterior Subspine FAI on 3D-CT-Based Impingement Simulation: Implications for Hip Arthroscopy. The American journal of sports medicine, 47(13), pp. 3120-3132. Sage 10.1177/0363546519873666

Kappel, Sven; Stoklosa, Paulina; Hauert, Barbara; Ross-Kaschitza, Daniela; Borgström, Anna; Baur, Roland; Galván, José A.; Zlobec, Inti; Peinelt, Christine (2019). TRPM4 is highly expressed in human colorectal tumor buds and contributes to proliferation, cell cycle, and invasion of colorectal cancer cells. Molecular oncology, 13(11), pp. 2393-2405. FEBS Press 10.1002/1878-0261.12566

Lanzos, Andrés; Elliott, Kerryn (2019). EACR Cancer Genomics 2019 conference: from tumour evolution to personalised immunotherapy. FEBS journal, 286(21), pp. 4209-4214. Wiley-Blackwell 10.1111/febs.15063

Wang, Bi-Cheng; Zhang, Zhan-Jie; Fu, Chen; Wang, Chang (2019). Efficacy and safety of anti-PD-1/PD-L1 agents vs chemotherapy in patients with gastric or gastroesophageal junction cancer: a systematic review and meta-analysis. Medicine, 98(47), e18054. Wolters Kluwer Health 10.1097/MD.0000000000018054

Hausherr, Anna; Becker, Jens Michael; Meylan, Mireille; Wüthrich, Dominik; Collaud, Alexandra; Rossano, Alexandra; Perreten, Vincent (2019). Antibiotic and quaternary ammonium compound resistance in Escherichia coli from calves at the beginning of the -fattening period in Switzerland (2017). Schweizer Archiv für Tierheilkunde, 161(11), pp. 741-748. Gesellschaft Schweizer Tierärztinnen und Tierärzte 10.17236/sat00233

Gebhardt-Henrich, Sabine G.; Rufener, Christina; Stratmann, Ariane (2019). Improving intra- and inter-observer repeatability and accuracy of keel bone assessment by training with radiographs. Poultry science, 98(11), pp. 5234-5240. Elsevier 10.3382/ps/pez410

Li, Shuangjiang; Zhang, Yang; Du, Heng; Zhang, Wenbiao; Che, Guowei; Liu, Lunxu (2019). Novel systemic inflammation response index to predict prognosis after thoracoscopic lung cancer surgery: a propensity score-matching study. ANZ journal of surgery, 89(11), E507-E513. Wiley 10.1111/ans.15480

Paolucci, Iwan; Hermann, Jan; Sandu, Raluca-Maria; Candinas, Daniel; Tinguely, Pascale Marie Pia; Weber, Stefan (30 October 2019). Robotically customizable thermal ablation volumes (Unpublished). In: IEEE Engineering in Medicine & Biology International Student Conference 2019. Magdeburg. 30.10.2019.

Castro Dias, Mariana; Mapunda, Josephine A.; Vladymyrov, Mykhailo; Engelhardt, Britta (2019). Structure and Junctional Complexes of Endothelial, Epithelial and Glial Brain Barriers. International journal of molecular sciences, 20(21) Molecular Diversity Preservation International MDPI 10.3390/ijms20215372

Mantegazza, Alberto; Clavica, Francesco; Obrist, Dominik (27 October 2019). Microfluidic investigation of red blood cell phase separation in complex microchannel networks (Unpublished). In: 23rd International Conference on Miniaturized System for Chemistry and Life Sciences. Basel. 27-31 Oct 2019.

Zysset-Burri, Denise C.; Keller, Irene; Berger, Lieselotte E.; Neyer, Peter J; Steuer, Christian; Wolf, Sebastian; Zinkernagel, Martin S. (2019). Retinal artery occlusion is associated with compositional and functional shifts in the gut microbiome and altered trimethylamine-N-oxide levels. Scientific reports, 9(1), p. 15303. Springer Nature 10.1038/s41598-019-51698-5

Langenegger, Nicolas; Nentwig, Wolfgang; Kuhn-Nentwig, Lucia (2019). Spider Venom: Components, Modes of Action, and Novel Strategies in Transcriptomic and Proteomic Analyses. Toxins, 11(10) MDPI 10.3390/toxins11100611

Fontanellaz, Matthias; Christodoulidis, Stergios; Mougiakakou, Stavroula (21 October 2019). Self-Attention and Ingredient-Attention Based Model for Recipe Retrieval from Image Queries. In: 5th International Workshop on Multimedia Assisted Dietary Management (MADiMa '19) (pp. 25-31). New York: ACM 10.1145/3347448.3357163

Mariani, O.; Ernst, Alexander; Mercader, Nadia; Liebling, Michael (2019). Reconstruction of image sequences from ungated and scanning-aberrated laser scanning microscopy images of the beating heart. IEEE transactions on computational imaging, 6, pp. 385-395. IEEE 10.1109/TCI.2019.2948772

Paolucci, Iwan; Sandu, Raluca-Maria; Sahli, Luca Andrea; Candinas, Daniel; Weber, Stefan; Lachenmayer, Anja (11 October 2019). Ex-vivo evaluation of an ultrasound-based planning and navigation method for non-anatomical liver resections (Unpublished). In: Conference of the international society for medical innovation and technology. Heilbronn. 10. - 11.10.2019.

Fountoukidou, Tatiana; Sznitman, Raphael (10 October 2019). Concept-Centric Visual Turing Tests for Method Validation. In: International Conference on Medical Image Computing and Computer-Assisted Intervention. Lecture Notes in Computer Science: Vol. 11768 (pp. 254-262). Springer, Cham 10.1007/978-3-030-32254-0_29

Rebsamen, Michael; Rummel, Christian; Mürner-Lavanchy, Ines; Reyes, M; Wiest, Roland; McKinley, Richard (2019). Surface-Based Brain Morphometry for the Prediction of Fluid Intelligence in the Neurocognitive Prediction Challenge 2019. In: Pohl, Kilian M.; Thompson, Wesley K.; Adeli, Ehsan; Linguraru, Marius George (eds.) Adolescent Brain Cognitive Development Neurocognitive Prediction. ABCD-NP 2019. Lecture notes in computer science: Vol. 11791 (pp. 26-34). Cham, Switzerland: Springer

Sandu, Raluca-Maria; Paolucci, Iwan; Tinguely, Pascale Marie Pia; Candinas, Daniel; Freedman, Jacob; Weber, Stefan (10 October 2019). Quantitative volumetric assessment of percutaneous image-guided microwave ablations for colorectal liver metastases (Unpublished). In: SMIT- 31st Conference of the international Society for Medical Innovation and Technology. Heilbronn, Germany. 10 Oct - 12 Oct 2019.

Xu, Duo; Yang, Haitang; Zhang, Yang; Berezowska, Sabina; Gao, Yanyun; Shun-Qing, Liang; Marti, Thomas M.; Hall, Sean R. R.; Dorn, Patrick; Kocher, Gregor J.; Schmid, Ralph A.; Peng, Ren-Wang (2019). Endoplasmic Reticulum Stress Signaling as a Therapeutic Target in Malignant Pleural Mesothelioma. Cancers, 11(10) MDPI AG 10.3390/cancers11101502

Chrif, Farouk; Nef, Tobias; Hunt, Kenneth J (2019). Technical feasibility of constant-load and high-intensity interval training for cardiopulmonary conditioning using a re-engineered dynamic leg press. BMC biomedical engineering, 1(1) BioMed Central 10.1186/s42490-019-0025-9

Zeng, Guodong; Zheng, Guoyan (2019). Holistic decomposition convolution for effective semantic segmentation of medical volume images. Medical image analysis, 57, pp. 149-164. Elsevier 10.1016/j.media.2019.07.003

Frauchiger, Daniela A; Tekari, Adel; May, Rahel Deborah; Džafo, Emina; Chan, Samantha Cw; Stoyanov, Jivko; Bertolo, Alessandro; Zhang, Xingshuo; Guerrero, Julien; Sakai, Daisuke; Schol, Jordy; Grad, Sibylle; Tryfonidou, Marianna A; Benneker, Lorin M.; Gantenbein, Benjamin (2019). FACS is more potent to fish IVD progenitor cells than magnetic and bead-based methods. Tissue engineering. Part C, Methods, 25(10), pp. 571-580. Mary Ann Liebert 10.1089/ten.TEC.2018.0375

Bauer, Anina; de Lucia, M; Leuthard, Fabienne Nadja; Jagannathan, Vidya; Leeb, Tosso (2019). Compound heterozygosity for TNXB genetic variants in a mixed-breed dog with Ehlers-Danlos syndrome. Animal genetics, 50(5), pp. 546-549. Wiley 10.1111/age.12830

Lerch, Till; Eichelberger, Patric; Baur, Heiner; Schmaranzer, Florian; Liechti, Emanuel F.; Schwab, Joe M; Siebenrock, Klaus A.; Tannast, Moritz (2019). Prevalence and diagnostic accuracy of in-toeing and out-toeing of the foot for patients with abnormal femoral torsion and femoroacetabular impingement: implications for hip arthroscopy and femoral derotation osteotomy. The Bone & Joint Journal, 101-B(10), pp. 1218-1229. British Editorial Society of Bone and Joint Surgery 10.1302/0301-620X.101B10.BJJ-2019-0248.R1

Lerch, Till; Degonda, Celia; Schmaranzer, Florian; Todorski, Inga; Cullmann-Bastian, Jennifer; Zheng, Guoyan; Siebenrock, Klaus A.; Tannast, Moritz (2019). Patient-Specific 3-D Magnetic Resonance Imaging-Based Dynamic Simulation of Hip Impingement and Range of Motion Can Replace 3-D Computed Tomography-Based Simulation for Patients With Femoroacetabular Impingement: Implications for Planning Open Hip Preservation Surgery and Hip Arthroscopy. The American journal of sports medicine, 47(12), pp. 2966-2977. Sage 10.1177/0363546519869681

Adams, Olivia; Janser, Félice A.; Dislich, Bastian; Berezowska, Sabina; Humbert, Magali; Seiler, Christian A.; Kröll, Dino; Slotta-Huspenina, Julia; Feith, Marcus; Ott, Katja; Tschan, Mario P.; Langer, Rupert (2019). Correction: A specific expression profile of LC3B and p62 is associated with nonresponse to neoadjuvant chemotherapy in esophageal adenocarcinomas. PLoS ONE, 14(10), e0224832. Public Library of Science 10.1371/journal.pone.0224832

Villar Ortega, Eduardo; Ansó, Juan; Bütler, Karin A.; Marchal-Crespo, Laura (25 September 2019). High-frequency transcutaneous cervical electrical stimulation: A pilot study (In Press). Artificial organs. Wiley-Blackwell

Bauer, Anina; Bateman, John F; Lamandé, Shireen R; Hanssen, Eric; Kirejczyk, Shannon G M; Yee, Mark; Ramiche, Ali; Jagannathan, Vidya; Welle, Monika; Leeb, Tosso; Bateman, Fiona L (2019). Identification of Two Independent COL5A1 Variants in Dogs with Ehlers-Danlos Syndrome. Genes, 10(10) MDPI, Molecular Diversity Preservation International 10.3390/genes10100731

Sandu, Raluca-Maria; Paolucci, Iwan; Tinguely, Pascale Marie Pia; Weber, Stefan; Freedman, Jacob (20 September 2019). Quantitative volumetric assessment of percutaneous image-guided microwave ablations for colorectal liver metastases (Unpublished). In: CURAC - 18th Annual Meeting of the German Society for Computer- and Robot-Assisted Surgery. Reutligen, Germany. 19 Sep - 21 Sep 2019.

Paolucci, Iwan; Sandu, Raluca-Maria; Sahli, Luca Andrea; Candinas, Daniel; Weber, Stefan; Lachenmayer, Anja (19 September 2019). Ex-vivo evaluation of an ultrasound-based planning and navigation method for non-anatomical liver resections. In: 18. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie. Reutlingen. 19.09.2019.

Paolucci, Iwan; Hermann, Jan; Sandu, Raluca-Maria; Candinas, Daniel; Tinguely, Pascale Marie Pia; Weber, Stefan (19 September 2019). Thermal ablation volumes with configurable shapes. In: 18. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie. Reutlingen. 19.09.2019.

Hermann, Jan; Ledergerber, Jonas; Wigger, Martin; Schneider, Daniel; Müller, Fabian Matthias; Weber, Stefan; O'Toole Bom Braga, Gabriela (19 September 2019). Towards robotic embedding of cochlear implants in the temporal bone. In: Burgert, Oliver; Hirt, Bernhard (eds.) 18. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC). Reutlingen. 19. - 21. September 2019.

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Schütz, Narayan; Leichtle, Alexander Benedikt; Riesen, Kaspar (2019). A comparative study of pattern recognition algorithms for predicting the inpatient mortality risk using routine laboratory measurements. Artificial intelligence review, 52(4), pp. 2559-2573. Springer 10.1007/s10462-018-9625-3

do Couto Pires, João Pedro; Kraemer, Julia G.; Kuenzli, Esther; Kasraian, Sara; Tinguely, Regula; Hatz, Christoph; Endimiani, Andrea; Hilty, Markus (2019). Gut microbiota dynamics in travelers returning from India colonized with extended-spectrum cephalosporin-resistant Enterobacteriaceae: A longitudinal study. Travel medicine and infectious disease, 27, pp. 72-80. Elsevier 10.1016/j.tmaid.2018.10.012

Bereuter, Lukas David; Kuenzle, Timon; Niederhauser, Thomas; Kucera, Martin; Obrist, Dominik; Reichlin, Tobias Roman; Tanner, Hildegard; Haeberlin, Andreas (2019). Fundamental characterization of conductive intracardiac communication for leadless multisite pacemaker systems. IEEE transactions on biomedical circuits and systems, 13(1), pp. 237-247. Institute of Electrical and Electronics Engineers IEEE 10.1109/TBCAS.2018.2886042

Potenza, Duilio Michele; Janicek, Radoslav; Fernandez Tenorio, Miguel; Camors, Emmanuel; Ramos-Mondragón, Roberto; Valdivia, Héctor H.; Niggli, Ernst (2019). Phosphorylation of the ryanodine receptor 2 at serine 2030 is required for a complete β-adrenergic response. Journal of general physiology, 151(2), pp. 131-145. Rockefeller University Press 10.1085/jgp.201812155

Loughlin, Fionna E.; Lukavsky, Peter J.; Kazeeva, Tamara; Reber, Stefan; Hock, Eva-Maria; Colombo, Martino; Von Schroetter, Christine; Pauli, Phillip; Cléry, Antoine; Mühlemann, Oliver; Polymenidou, Magdalini; Ruepp, Marc-David; Allain, Frédéric H.-T. (2019). The Solution Structure of FUS Bound to RNA Reveals a Bipartite Mode of RNA Recognition with Both Sequence and Shape Specificity. Molecular cell, 73(3), 490-504.e6. Cell Press 10.1016/j.molcel.2018.11.012

Illaste, Ardo; Wullschleger, Marcel; Fernandez Tenorio, Miguel; Niggli, Ernst; Egger, Marcel (2019). Automatic Detection and Classification of Ca2+ Release Events in Line- and Frame-Scan Images. Biophysical journal, 116(3), pp. 383-394. Biophysical Society 10.1016/j.bpj.2018.12.013

Mossu, Adrien; Rosito, Maria; Khire, Tejas; Li Chung, Hung; Nishihara, Hideaki; Gruber, Isabelle; Luke, Emma; Dehouck, Lucie; Sallusto, Federica; Gosselet, Fabien; McGrath, James L; Engelhardt, Britta (2019). A silicon nanomembrane platform for the visualization of immune cell trafficking across the human blood-brain barrier under flow. Journal of cerebral blood flow and metabolism, 39(3), pp. 395-410. Sage 10.1177/0271678X18820584

Marion, Solenne; Studer, Nicolas; Desharnais, Lyne; Menin, Laure; Escrig, Stéphane; Meibom, Anders; Hapfelmeier, Siegfried Hektor; Bernier-Latmani, Rizlan (2019). In vitro and in vivo characterization of Clostridium scindens bile acid transformations. Gut microbes, 10(4), pp. 481-503. Taylor & Francis 10.1080/19490976.2018.1549420

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Jörger Messerli, Marianne; Haesler, Valérie; Thomi, Gierin Florence; Spinelli, Marialuigia; Surbek, Daniel; Schoeberlein, Andreina (2019). Exosomes from stem cells of the umbilical cord trigger oligodendroglial differentiation in neural/oligodendroglial progenitor cells. American journal of obstetrics and gynecology, 220(1, Suppl.), S608-S608. Elsevier 10.1016/j.ajog.2018.11.966

Florini, Francesca; Naguleswaran, Arunasalam; Gharib, Walid H; Bringaud, Frédéric; Roditi, Isabel (2019). Unexpected diversity in eukaryotic transcription revealed by the retrotransposon hotspot family of Trypanosoma brucei. Nucleic acids research, 47(4), pp. 1725-1739. Oxford University Press 10.1093/nar/gky1255

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Rathgeb, Christoph Martin; Demattè, Marco; Yacoub, Abraam; Anschütz, Lukas Peter; Wagner, Franca; Mantokoudis, Georgios; Caversaccio, Marco; Wimmer, Wilhelm (2019). Clinical Applicability of a Preoperative Angular Insertion Depth Prediction Method for Cochlear Implantation. Otology & neurotology, 40(8), pp. 1011-1017. Lippincott Williams & Wilkins 10.1097/MAO.0000000000002304

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Parejo, Sarah; Tschan, Mario; Muraro, Manuele G; Garattini, Enrico; Spagnoli, Giulio C; Schläfli, Anna M (2019). Assessing Autophagy During Retinoid Treatment of Breast Cancer Cells. In: Ray, Swapan K. (ed.) Retinoid and Rexinoid Signaling. Methods in molecular biology: Vol. 2019 (pp. 237-256). Springer 10.1007/978-1-4939-9585-1_17

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May, Rahel D.; Frauchiger, Daniela A.; Albers, Christoph E.; Benneker, Lorin M.; Gantenbein, Benjamin (2019). Changes in gene expression of intervertebral discs from diffuse idiopathic skeletal hyperostosis (DISH) patients compared to traumatic/degenerative intervertebral discs. In: 7th International Congress on Biotechnologies for Spinal Surgery (BioSpine7). Rom, Italy. 3-5 April.

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May, Rahel D.; Frauchiger, D.A.; Albers, Christoph E.; Benneker, Lorin M.; Hofstetter, W.; Gantenbein, Benjamin (2019). Changes in Gene Expression of Discs from Diffuse Idiopathic Skeletal Hyperostosis (DISH) Patients Compared to Traumatic/Degenerative Discs. In: TERMIS EU chapter meeting. Rhodes, Greece. 27th-31st May 2019.

May, Rahel Deborah; Frauchiger, D.A.; Albers, Christoph E.; Benneker, Lorin M.; Hofstetter, Wilhelm; Gantenbein, Benjamin (2019). Stimulation of intervertebral disc cells in alginate bead culture with bone morphogenetic protein 2 and/or L51P. In: TERMIS EU chapter meeting. Rhodes, Greece. 27th-31s tMay.

Frauchiger, D.A.; May, Rahel Deborah; Dzafo, E.; Zhang, Xingshuo; Stoyanov, J.; Bertolo, A.; Benneker, Lorin Michael; Sakai, D.; Grad, S.; Tryfonidou, M.A.; Gantenbein, Benjamin (2019). FACS reveals more Pluripotent Intervertebral Disc Progenitor Cells compared to MACS and pluriSelect. In: TERMIS European Chapter Meeting 2019 (p. 898). Davos eCMjournal: www.ecmjournal.org

Garcia Nicolas, Obdulio; Lewandowska, Marta; Ricklin, Meret E.; Summerfield, Artur (2019). Monocyte-Derived Dendritic Cells as Model to Evaluate Species Tropism of Mosquito-Borne Flaviviruses. Frontiers in cellular and infection microbiology, 9(5), p. 5. Frontiers 10.3389/fcimb.2019.00005

Bykowska, Ola; Gontier, Camille; Sax, Anne-Lene; Jia, David W.; Montero, Milton Llera; Bird, Alex D.; Houghton, Conor; Pfister, Jean-Pascal; Ponte Costa, Rui (2019). Model-Based Inference of Synaptic Transmission. Frontiers in synaptic neuroscience, 11, p. 21. Frontiers Research Foundation 10.3389/fnsyn.2019.00021

Erni, Silvia T.; Fernandes, Gabriella; Buri, Michelle; Perny, Michael; Rutten, Rolf Jan; van Noort, Johannes M; Senn, Pascal; Grandgirard, Denis; Roccio, Marta; Leib, Stephen (2019). Anti-inflammatory and Oto-Protective Effect of the Small Heat Shock Protein Alpha B-Crystallin (HspB5) in Experimental Pneumococcal Meningitis. Frontiers in neurology, 10(570), p. 570. Frontiers Media S.A. 10.3389/fneur.2019.00570

Pucken, Valerie-Beau; Schüpbach-Regula, Gertraud; Gerber, Manuela; Salis Gross, Corina; Bodmer, Michèle (2019). Veterinary peer study groups as a method of continuous education-A new approach to identify and address factors associated with antimicrobial prescribing. PLoS ONE, 14(9), e0222497. Public Library of Science 10.1371/journal.pone.0222497

PCAWG Driver Group, PCAWG Driver Group; Lanzos, Andrés (2019). Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes (bioRxiv). Cold Spring Harbor Laboratory 10.1101/237313

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Kurmann, Thomas Kevin; Márquez-Neila, Pablo; Yu, Siqing; Munk, Marion; Wolf, Sebastian; Sznitman, Raphael (2019). Fused Detection of Retinal Biomarkers in OCT Volumes. In: Shen, Dinggang; Liu, Tianming; Peters, Terry M.; Staib, Lawrence H.; Essert, Caroline; Zhou, Sean; Yap, Pew-Thian; Khan, Ali (eds.) MICCAI 2019. Lecture Notes in Computer Science: Vol. 11764 (pp. 255-263). Cham: Springer International Publishing 10.1007/978-3-030-32239-7_29

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Paolucci, Iwan; Sandu, Raluca-Maria; Tinguely, Pascale; Kim-Fuchs, Corina; Maurer, Martin; Candinas, Daniel; Weber, Stefan; Lachenmayer, Anja (2019). Stereotactic Image-Guidance for Ablation of Malignant Liver Tumors (In Press). In: Liver Cancer. London: IntechOpen 10.5772/intechopen.89722

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Yang, Haitang; Shun-Qing, Liang; Schmid, Ralph A.; Peng, Ren-Wang (2019). New Horizons in KRAS-Mutant Lung Cancer: Dawn After Darkness. Frontiers in oncology, 9, p. 953. Frontiers Research Foundation 10.3389/fonc.2019.00953

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Varholick, Justin A.; Pontiggia, Alice; Murphy, Eimear; Daniele, Vanessa; Palme, Rupert; Voelkl, Bernhard; Würbel, Hanno; Bailoo, Jeremy D. (2019). Social dominance hierarchy type and rank contribute to phenotypic variation within cages of laboratory mice. Scientific reports, 9(1), p. 13650. Springer Nature 10.1038/s41598-019-49612-0

Sande-Melón, Marcos; Marques, Inês J.; Galardi-Castilla, María; Langa, Xavier; Pérez-López, María; Botos, Marius-Alexandru; Sánchez-Iranzo, Héctor; Guzmán-Martínez, Gabriela; Ferreira Francisco, David Miguel; Pavlinic, Dinko; Benes, Vladimir; Bruggmann, Rémy; Mercader Huber, Nadia Isabel (2019). Adult sox10+ Cardiomyocytes Contribute to Myocardial Regeneration in the Zebrafish. Cell reports, 29(4), pp. 1041-1054. Cell Press 10.1016/j.celrep.2019.09.041

Marques, Ines J.; Lupi, Eleonora; Mercader, Nadia (2019). Model systems for regeneration: zebrafish. Development, 146(18) Company of Biologists Limited 10.1242/dev.167692

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Andrés-Delgado, Laura; Ernst, Alexander; Galardi-Castilla, María; Bazaga, David; Peralta, Marina; Münch, Juliane; González-Rosa, Juan M.; Marques, Inês; Tessadori, Federico; de la Pompa, José Luis; Vermot, Julien; Mercader, Nadia (2019). Actin dynamics and the Bmp pathway drive apical extrusion of proepicardial cells. Development, 146(13) Company of Biologists Limited 10.1242/dev.174961

Casari, Daniele; Pethö, Laszlo; Schürch, Patrik; Maeder, Xavier; Philippe, Laetitia; Michler, Johann; Zysset, Philippe; Schwiedrzik, Jakob (2019). A self-aligning microtensile setup: Application to single-crystal GaAs microscale tension–compression asymmetry. Journal of materials research, 34(14), pp. 2517-2534. Cambridge University Press 10.1557/jmr.2019.183

Ovesy, Marzieh; Indermaur, Michael; Zysset, Philippe (2019). Prediction of insertion torque and stiffness of a dental implant in bovine trabecular bone using explicit micro-finite element analysis. Journal of the mechanical behavior of biomedical materials, 98, pp. 301-310. Elsevier 10.1016/j.jmbbm.2019.06.024

Rebsamen, Michael; Knecht, Urspeter; Reyes, Mauricio; Wiest, Roland; Meier, Raphael; McKinley, Richard (2019). Divide and Conquer: Stratifying Training Data by Tumor Grade Improves Deep Learning-Based Brain Tumor Segmentation. Frontiers in neuroscience, 13, p. 1182. Frontiers Research Foundation 10.3389/fnins.2019.01182

Sauer, Fay J.; Hermann, Marco; Ramseyer, Alessandra; Burger, Dominik; Riemer, Stefanie; Gerber, Vinzenz (2019). Effects of breed, management and personality on cortisol reactivity in sport horses. PLoS ONE, 14(12), pp. 1-19. Public Library of Science 10.1371/journal.pone.0221794

Gao, Yanyun; Dorn, Patrick; Liu, Shengchen; Deng, Haibin; Hall, Sean R. R.; Peng, Ren-Wang; Schmid, Ralph; Marti, Thomas M. (2019). Cisplatin-resistant A549 non-small cell lung cancer cells can be identified by increased mitochondrial mass and are sensitive to pemetrexed treatment. Cancer cell international, 19(317), p. 317. BioMed Central 10.1186/s12935-019-1037-1

Balsiger, Fabian; Scheidegger, Oliver; Carlier, Pierre; Marty, Benjamin; Reyes, Mauricio (2019). On the Spatial and Temporal Influence for the Reconstruction of Magnetic Resonance Fingerprinting. Proceedings of machine learning research, pp. 27-38. JMLR

Braun, Roman Othmar; Brunner, Livia; Wyler, Kurt; Auray, Gael; Garcia Nicolas, Obdulio; Python, Sylvie; Zumkehr, Beatrice; Gaschen, Veronique; Stoffel, Michael Hubert; Collin, Nicolas; Barnier-Quer, Christophe; Bruggmann, Rémy; Summerfield, Artur (2019). Erratum: Author Correction: System immunology-based identification of blood transcriptional modules correlating to antibody responses in sheep. npj vaccines, 4(10), p. 10. Nature Publishing Group 10.1038/s41541-019-0100-1

Vermij, Sarah Helena; Abriel, Hugues; Kucera, Jan (2019). Modeling Depolarization Delay, Sodium Currents, and Electrical Potentials in Cardiac Transverse Tubules. Frontiers in physiology, 10(1487) Frontiers Research Foundation 10.3389/fphys.2019.01487

Verschoor, Daniëlle; von Gunten, Stephan (2019). Allergy and Atopic Diseases: An Update on Experimental Evidence. International archives of allergy and immunology, 180(4), pp. 235-243. Karger 10.1159/000504439

Potez, Marine; Fernandez Palomo, Cristian; Bouchet, Audrey; Trappetti, Verdiana; Donzelli, Mattia; Krisch, Michael; Laissue, Jean; Volarevic, Vladislav; Djonov, Valentin (2019). Synchrotron Microbeam Radiation Therapy as a New Approach for the Treatment of Radioresistant Melanoma: Potential Underlying Mechanisms. International journal of radiation oncology, biology, physics, 105(5), pp. 1126-1136. Elsevier 10.1016/j.ijrobp.2019.08.027

Pais, B; Buluschek, P; Nef, T; Schütz, N; Saner, H; Gatica, D; Santschi, V (2019). In-home monitoring evaluation by home-dwelling older adults, caregivers and healthcare providers. European journal of public health, 29(Supplement_4), p. 115. Oxford University Press 10.1093/eurpub/ckz185.301

Ritler, Dominic; Rufener, Reto; Li, Jia V.; Kämpfer, Urs; Müller, Joachim; Bühr, Claudia; Schürch, Stefan; Lundström Stadelmann, Britta (2019). In vitro metabolomic footprint of the Echinococcus multilocularis metacestode. Scientific reports, 9(1), p. 19438. Springer Nature 10.1038/s41598-019-56073-y

Janser, Félice A.; Ney, Patricia; Teixeira Pinto, Marta; Langer, Rupert; Tschan, Mario P. (2019). The Chick Chorioallantoic Membrane (CAM) Assay as a Three-dimensional Model to Study Autophagy in Cancer Cells. Bio-protocol, 9(13) bio-protocol 10.21769/BioProtoc.3290

Balsiger, Fabian; Soom, Yannick; Scheidegger, Olivier; Reyes, Mauricio (2019). Learning Shape Representation on Sparse Point Clouds for Volumetric Image Segmentation. In: Medical Image Computing and Computer Assisted Intervention – MICCAI 2019. Lecture Notes in Computer Science: Vol. 11765 (pp. 273-281). Cham: Springer International Publishing 10.1007/978-3-030-32245-8_31

Jungo, Alain; Reyes, Mauricio (2019). Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation. Lecture notes in computer science, 11765, pp. 48-56. Springer 10.1007/978-3-030-32245-8_6

Parween, Shaheena; Rojas Velazquez, Maria Natalia; Udhane, Sameer S.; Kagawa, Norio; Pandey, Amit Vikram (2019). Variability in Loss of Multiple Enzyme Activities Due to the Human Genetic Variation P284T Located in the Flexible Hinge Region of NADPH Cytochrome P450 Oxidoreductase. Frontiers in Pharmacology, 10, p. 1187. Frontiers 10.3389/fphar.2019.01187

Grafinger, Katharina Elisabeth; Mandhair, Harpreet Kaur; Broillet, Alain; Gertsch, Jürg; Weinmann, Wolfgang (2019). Cytotoxicity of the synthetic cannabinoids 5C-AKB48, 5F-MDMB-PINACA, ADB-CHMINACA, MDMB-CHMICA and NM-2201 in A549 and TR146 cell lines. Forensic toxicology, 37(2), pp. 398-411. Springer 10.1007/s11419-019-00474-1

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Hemphill, Andrew; Rufener, Reto; Ritler, Dominic; Dick, Luca; Lundström Stadelmann, Britta (2019). Drug Discovery and Development for the Treatment of Echinococcosis, Caused by the Tapeworms Echinococcus granulosus and Echinococcus multilocularis. In: Swinney, David C.; Pollastri, Michael P. (eds.) Neglected Tropical Diseases: drug discovery and development. Methods and Principles in Medicinal Chemistry (pp. 253-287). Wiley 10.1002/9783527808656.ch10

Josi, Christoph; Bürki, Sibylle; Vidal, Sara; Dordet-Frisoni, Emilie; Citti, Christine; Falquet, Laurent; Pilo, Paola (2019). Large-Scale Analysis of the Mycoplasma bovis Genome Identified Non-essential, Adhesion- and Virulence-Related Genes. Frontiers in Microbiology, 10, p. 2085. Frontiers 10.3389/fmicb.2019.02085

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Mills, Daniel; Rogers, Jennifer; Kerulo, Greta; Bremhorst, Annika; Hall, Sophie (2019). Getting the Right Dog for the Right Job for Animal-Assisted Interventions (AAI): Essential Understanding of Dog Behavior and Ethology for Those Working Within AAI. In: Handbook on Animal-Assisted Therapy: Foundations and Guidelines for Animal-Assisted Interventions (pp. 115-131). Elsevier, Academic Press 10.1016/b978-0-12-815395-6.00009-2

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Bereuter, Lukas; Gysin, Mirco; Küffer, Thomas; Kucera, Martin; Niederhauser, Thomas; Fuhrer, Jürg; Heinisch, Paul Philipp; Zurbuchen, Adrian; Obrist, Dominik; Tanner, Hildegard; Haeberlin, Andreas (2018). Leadless dual-chamber pacing – a novel communication method for wireless pacemaker synchronization. JACC. Basic to translational science, 3(6), pp. 813-823. Elsevier 10.1016/J.JACBTS.2018.07.009

Precht, Maria Christina; Diserens, Gaëlle; Vermathen, Martina; Oevermann, Anna; Lauper, Josiane; Vermathen, Peter (2018). Metabolic profiling of listeria rhombencephalitis in small ruminants by 1 H high-resolution magic angle spinning NMR spectroscopy. NMR in biomedicine, 31(12), e4023. Wiley Interscience 10.1002/nbm.4023

Coraggio, Francesca; Püschel, Ringo; Marti, Alisha; Meister, Pierre (2018). Polycomb and Notch signaling regulate cell proliferation potential during Caenorhabditis elegans life cycle. Life science alliance, 2(1), e201800170. EMBO Press 10.26508/lsa.201800170

Nasher, Fauzy Negiub Ali; Aguilar, Fernando; Aebi, Susanne; Hermans, Peter WM; Heller, Manfred; Hathaway, Lucy Jane (2018). Peptide Ligands of AmiA, AliA, and AliB Proteins Determine Pneumococcal Phenotype. Frontiers in Microbiology, 9(3013) Frontiers 10.3389/fmicb.2018.03013

Riether, Carsten; Pabst, Thomas; Höpner, Sabine; Bacher, Vera; Hinterbrandner, Magdalena; Banz, Yara; Müller, Rouven; Manz, Markus G.; Gharib, Walid H.; Ferreira, David; Bruggmann, Remy; Van Rompaey, Luc; Moshir, Mahan; Delahaye, Tim; Gandini, Domenica; Erzeel, Ellen; Hultberg, Anna; Fung, Samson; De Haard, Hans; Leupin, Nicolas; ... (2 December 2018). 2680 Argx-110 Targeting CD70, in Combination with Azacitidine, Shows Favorable Safety Profile and Promising Anti-Leukemia Activity in Newly Diagnosed AML Patients in an Ongoing Phase 1/2 Clinical Trial (Unpublished). In: ASCO 2018. 2. Dezember 2018.

Tamò, Luca; Hibaoui, Youssef; Kallol, Sampada; Alves, Marco; Albrecht, Christiane; Hostettler, Katrin E; Feki, Anis; Rougier, Jean-Sébastien; Abriel, Hugues; Knudsen, Lars; Gazdhar, Amiq; Geiser, Thomas (2018). Generation of an alveolar epithelial type II cell line from induced pluripotent stem cells. American journal of physiology - lung cellular and molecular physiology, 315(6), L921-L932. American Physiological Society 10.1152/ajplung.00357.2017

Döring, André; Adalid López, Víctor Javier; Boesch, Christoph Hans; Kreis, Roland (2018). Diffusion-weighted magnetic resonance spectroscopy boosted by simultaneously acquired water reference signals. Magnetic resonance in medicine, 80(6), pp. 2326-2338. Wiley-Liss 10.1002/mrm.27222

Schröck, Alexandra; Henzi, Anna; Bütikofer, Peter; König, Stefan; Weinmann, Wolfgang (2018). Determination of the formation rate of phosphatidylethanol by phospholipase D (PLD) in blood and test of two selective PLD inhibitors. Alcohol, 73, pp. 1-7. Elsevier 10.1016/j.alcohol.2018.03.003

Principe, Luigi; Viaggi, Valentina; Clément, Mathieu; Meroni, Elisa; Pini, Beatrice; Endimiani, Andrea; Luzzaro, Francesco (2018). Emergence of CTX-M-1-producing Salmonella enterica serovar Napoli: a novel "enzyme-pathogen association" in the Italian ESBL endemic context. Journal of global antimicrobial resistance, 15, pp. 101-102. Elsevier 10.1016/j.jgar.2018.08.023

Nyilas, Sylvia; Bauman, Grzegorz; Pusterla, Orso; Sommer, Gregor; Singer, Florian; Stranzinger, Enno; Heyer, Christoph; Ramsey, Kathryn Angela; Schlegtendal, Anne; Benzrath, Stefanie; Casaulta, Carmen; Goutaki, Myrofora; Kuehni, Claudia E; Bieri, Oliver; Koerner-Rettberg, Cordula; Latzin, Philipp (2018). Structural and Functional Lung Impairment in PCD: Assessment with MRI and Multiple Breath Washout in Comparison to Spirometry. Annals of the American Thoracic Society, 15(12), pp. 1434-1442. American Thoracic Society 10.1513/AnnalsATS.201712-967OC

Spycher, M; Bauer, Anina; Jagannathan, Vidhya; Frizzi, M; De Lucia, M; Leeb, Tosso (2018). A frameshift variant in the COL5A1 gene in a cat with Ehlers-Danlos syndrome. Animal genetics, 49(6), pp. 641-644. Wiley 10.1111/age.12727

Hadji Rasouliha, S; Bauer, Anina; Dettwiler, Martina Andrea; Welle, Monika Maria; Leeb, Tosso (2018). A frameshift variant in the EDA gene in Dachshunds with X-linked hypohidrotic ectodermal dysplasia. Animal genetics, 49(6), pp. 651-654. Wiley 10.1111/age.12729

De Niz, Mariana; Heussler, Volker (2018). Rodent malaria models: insights into human disease and parasite biology. Current opinion in microbiology, 46, pp. 93-101. Elsevier 10.1016/j.mib.2018.09.003

Kallol, Sampada Arvindrao; Moser-Haessig, Ruedi; Ontsouka, Edgar; Albrecht, Christiane (2018). Comparative expression patterns of selected membrane transporters in differentiated BeWo and human primary trophoblast cells. Placenta, 72-73, pp. 48-52. Elsevier 10.1016/j.placenta.2018.10.008

Yang, Haitang; Xu, Jianlin; Yao, Feng; Shun-Qing, Liang; Zhao, Heng (2018). Analysis of unexpected small cell lung cancer following surgery as the primary treatment. Journal of cancer research and clinical oncology, 144(12), pp. 2441-2447. Springer 10.1007/s00432-018-2766-6

Garcia Nicolas, Obdulio; Braun, Roman Othmar; Milona, Panagiota; Lewandowska, Marta; Dijkman, Ronald; Alves, Marco; Summerfield, Artur (2018). Targeting of the Nasal Mucosa by Japanese Encephalitis Virus for Non-Vector-Borne Transmission. Journal of virology, 92(24) American Society for Microbiology 10.1128/JVI.01091-18

Wang, Lei; Iwasaki, Yugo; Andra, Kiran K; Pandey, Kalpana; Menon, Anant K; Bütikofer, Peter (2018). Scrambling of natural and fluorescently tagged phosphatidylinositol by reconstituted G protein-coupled receptor and TMEM16 scramblases. Journal of biological chemistry, 293(47), pp. 18318-18327. American Society for Biochemistry and Molecular Biology 10.1074/jbc.RA118.004213

Panayidou, Klea; Davies, Mary-Ann; Anderegg, Nanina; Egger, Matthias; Collaborations Writing Group, IeDEA, COHERE, PHACS and IMPAACT 219C (2018). Global temporal changes in the proportion of children with advanced disease at the start of combination antiretroviral therapy in an era of changing criteria for treatment initiation. Journal of the International AIDS Society, 21(11), e25200. BioMed Central 10.1002/jia2.25200

Sun, Qingnan; Jankovic, Marko; Mougiakakou, Stavroula (20 November 2018). Impact of Errors in Carbohydrate Estimation on Control of Blood Glucose in Type 1 Diabetes (In Press). In: 2018 14th IEEE Symposium on Neural Networks and Applications (NEUREL) - IEEE Neurel2018. Institute of Electrical and Electronics Engineers

Chammartin, Frédérique; Zürcher, Kathrin; Keiser, Olivia; Weigel, Ralf; Chu, Kathryn; Kiragga, Agnes N; Ardura-Garcia, Cristina; Anderegg, Nanina; Laurent, Christian; Cornell, Morna; Tweya, Hannock; Haas, Andreas D; Rice, Brian D; Geng, Elvin H; Fox, Matthew P; Hargreaves, James R; Egger, Matthias (2018). Outcomes of Patients Lost to Follow-up in African Antiretroviral Therapy Programs: Individual Patient Data Meta-analysis. Clinical infectious diseases, 67(11), pp. 1643-1652. The University of Chicago Press 10.1093/cid/ciy347

Paolucci, Iwan; Eigl, Benjamin Peter; Garcia, Alain; Serra, Edgardo; Weber, Stefan; Gimenez, Mariano (9 November 2018). Percutaneous transgastric access for irreversible electroporation of pancreatic tumors using stereotactic image-guidance – an animal case (Unpublished). In: SMIT 2018 Conference of the international Society for Medical Innovation and Technology. Seoul, Korea. 8. - 10. November 2018.

Kaurov, Iosif; Vancová, Marie; Schimanski, Bernd; Cadena, Lawrence Rudy; Heller, Jiří; Bílý, Tomáš; Potěšil, David; Eichenberger, Claudia; Bruce, Hannah; Oeljeklaus, Silke; Warscheid, Bettina; Zdráhal, Zbyněk; Schneider, André; Lukeš, Julius; Hashimi, Hassan (2018). The Diverged Trypanosome MICOS Complex as a Hub for Mitochondrial Cristae Shaping and Protein Import. Current Biology, 28(21), 3393-3407.e5. Cell Press 10.1016/j.cub.2018.09.008

Bermúdez, Luisa; Del Pozo, Talía; Silvestre Lira, Bruno; de Godoy, Fabiana; Boos, Irene; Romanò, Cecilia; Previtali, Viola; Almeida, Juliana; Bréhélin, Claire; Asis, Ramón; Quadrana, Leandro; Demarco, Diego; Alseekh, Saleh; Salinas Gamboa, Rigel; Pérez-Flores, Laura; Dominguez, Pia Guadalupe; Rothan, Christophe; Fernie, Alisdair Robert; González, Maurício; Stocker, Achim; ... (2018). A Tomato Tocopherol-Binding Protein Sheds Light on Intracellular α-Tocopherol Metabolism in Plants. Plant & cell physiology, 59(11), pp. 2188-2203. Oxford Academic 10.1093/pcp/pcy191

Zeinali, Soheila; Bichsel, Colette A.; Hobi, Nina; Funke, Manuela; Marti, Thomas M.; Schmid, Ralph A.; Guenat, Olivier T.; Geiser, Thomas (2018). Human microvasculature-on-a chip: anti-neovasculogenic effect of nintedanib in vitro. Angiogenesis, 21(4), pp. 861-871. Springer Netherlands 10.1007/s10456-018-9631-8

Rohner, Lionel; Reinhart, Ramona; Hagmann, Björn; Odermatt, Andrea; Babirye, Annet; Kaufmann, Thomas; Fux, Michaela (2018). FcɛRI cross-linking and IL-3 protect human basophils from intrinsic apoptotic stress. The Journal of allergy and clinical immunology, 142(5), 1647-1650.e3. Elsevier 10.1016/j.jaci.2018.06.040

Nyilas, Sylvia; Bigler, Anja; Yammine, Sophie; Kieninger, Elisabeth; Rochat, Isabelle; Ramsey, Kathryn; Casaulta, Carmen; Moeller, Alexander; Latzin, Philipp; Singer, Florian (2018). Alternate gas washout indices: Assessment of ventilation inhomogeneity in mild to moderate pediatric cystic fibrosis lung disease. Pediatric pulmonology, 53(11), pp. 1485-1491. Wiley-Blackwell 10.1002/ppul.24149

Garcia Martin, Ana Bélen; Perreten, Vincent; Rossano, Alexandra; Schmitt, Sarah; Nathues, Heiko; Zeeh, Friederike (2018). Predominance of a macrolide-lincosamide-resistant Brachyspira hyodysenteriae of sequence type 196 in Swiss pig herds. Veterinary microbiology, 226, pp. 97-102. Elsevier 10.1016/j.vetmic.2018.10.007

Zindel, Joel; Kaderli, Reto Martin; Jakob, Manuel; Dosch, Michel; Tschan, Franziska; Candinas, Daniel; Beldi, Guido (2018). Electronic Voting to Improve Morbidity and Mortality Conferences. World journal of surgery, 42(11), pp. 3474-3481. Springer-Verlag 10.1007/s00268-018-4670-2

Alves, Marco; Vielle, Nathalie Jane; Thiel, Volker Earl; Pfänder, Stephanie (2018). Research Models and Tools for the Identification of Antivirals and Therapeutics against Zika Virus Infection. Viruses, 10(11) Molecular Diversity Preservation International MDPI 10.3390/v10110593

Talker, Stephanie; Baumann, Arnaud; Barut, Güliz Tuba; Keller, Irene; Bruggmann, Rémy; Summerfield, Artur (2018). Precise Delineation and Transcriptional Characterization of Bovine Blood Dendritic-Cell and Monocyte Subsets. Frontiers in immunology, 9(2505), p. 2505. Frontiers Research Foundation 10.3389/fimmu.2018.02505

Bailoo, Jeremy Davidson; Murphy, Eimear Mary; Boada Saña, Maria; Varholick, Justin Adam; Hintze, Sara Anna Elisabet; Baussière, Caroline; Hahn, Kerstin Caroline; Göpfert, Christine; Palme, Rupert; Voelkl, Bernhard; Würbel, Hanno (2018). Effects of Cage Enrichment on Behavior, Welfare and Outcome Variability in Female Mice. Frontiers in behavioral neuroscience, 12(232), p. 232. Frontiers Research Foundation 10.3389/fnbeh.2018.00232

Garcia Nicolas, Obdulio; V'kovski, Philip; Vielle, Nathalie J.; Ebert, Nadine; Züst, R; Portmann, Jasmine; Stalder, Hanspeter; Gaschen, Véronique; Vieyres, G; Stoffel, Michael; Schweizer, Matthias; Summerfield, Artur; Engler, O; Pietschmann, T; Todt, D; Alves, Marco; Thiel, Volker; Pfänder, Stephanie (2018). The small compound inhibitor K22 displays broad antiviral activity against different members of the family Flaviviridae and offers potential as pan-viral inhibitor. Antimicrobial agents and chemotherapy, 62(11) American Society for Microbiology 10.1128/AAC.01206-18

Chevalier, Morgan Yoann Edwin; Vermij, Sarah Helena; Wyler, Kurt; Gillet, Ludovic; Keller, Irene; Abriel, Hugues (2018). Corrigendum: Transcriptomic analyses of murine ventricular cardiomyocytes. Scientific data, 5(180216), p. 180216. Nature Publishing Group 10.1038/sdata.2018.216

Janser, Félice A.; Adams, Olivia Joan; Bütler, Vanessa; Bill, Anna Magdalena; Dislich, Bastian; Seiler, Christian A.; Kröll, Dino; Langer, Rupert; Tschan, Mario (2018). Her2-Targeted Therapy Induces Autophagy in Esophageal Adenocarcinoma Cells. International journal of molecular sciences, 19(10) Molecular Diversity Preservation International MDPI 10.3390/ijms19103069

Siebke, Inga; Furtwängler, Anja; Steuri, Noah; Krause, Johannes; Hafner, Albert; Lösch, Sandra (6 October 2018). Morphological Analyses of Late Neolithic human remains from Oberbipp (Unpublished). In: Jahresversammlung der Schweizerischen Gesellschaft für Anthropologie (SGA). Bern. 06.10.2018.

Braun, Roman Othmar; Brunner, Livia; Wyler, Kurt; Auray, Gael; Garcia Nicolas, Obdulio; Python, Sylvie; Zumkehr, Beatrice; Gaschen, Véronique; Stoffel, Michael Hubert; Collin, Nicolas; Barnier-Quer, Christophe; Bruggmann, Rémy; Summerfield, Artur (2018). System immunology-based identification of blood transcriptional modules correlating to antibody responses in sheep. npj vaccines, 3(41), p. 41. Nature Publishing Group 10.1038/s41541-018-0078-0

Serra, F; Dudas, S; Torres, J M; Anderson, R; Oevermann, Anna; Espinosa, J C; Czub, S; Seuberlich, Torsten (2018). Presumptive BSE cases with an aberrant prion protein phenotype in Switzerland, 2011: Lack of prion disease in experimentally inoculated cattle and bovine prion protein transgenic mice. Transboundary and emerging diseases, 65(5), pp. 1348-1356. Wiley 10.1111/tbed.12884

Ovesy, Marzieh; Voumard, Benjamin; Zysset, Philippe (2018). A nonlinear homogenized finite element analysis of the primary stability of the bone–implant interface. Biomechanics and Modeling in Mechanobiology, 17(5), pp. 1471-1480. Springer-Verlag 10.1007/s10237-018-1038-3

Grafinger, Katharina Elisabeth; Stahl, Katja; Wilke, Andreas; König, Stefan; Weinmann, Wolfgang (2018). In vitro phase I metabolism of three phenethylamines 25D-NBOMe, 25E-NBOMe and 25N-NBOMe using microsomal and microbial models. Drug testing and analysis, 10(10), pp. 1607-1626. Wiley 10.1002/dta.2446

Pedersen, Eva S L; de Jong, Carmen C M; Ardura Garcia, Cristina; Barben, Juerg; Casaulta, Carmen; Frey, Urs; Jochmann, Anja; Latzin, Philipp; Moeller, Alexander; Regamey, Nicolas; Singer, Florian; Spycher, Ben; Sutter, Oliver; Goutaki, Myrofora; Kuehni, Claudia E; study group, SPAC (2018). The Swiss Paediatric Airway Cohort (SPAC). ERJ Open Research, 4(4), 00050. European Respiratory Society 10.1183/23120541.00050-2018

Neumann, Roland P; Hilty, Markus; Xu, Binbin; Usemann, Jakob; Korten, Insa; Mika, Moana; Müller, Loretta; Latzin, Philipp; Frey, Urs (2018). Nasal microbiota and symptom persistence in acute respiratory tract infections in infants. ERJ Open Research, 4(4) European Respiratory Society 10.1183/23120541.00066-2018

Gasser, Pascal; Eggel, Alexander (2018). Targeting IgE in allergic disease. Current opinion in immunology, 54, pp. 86-92. Elsevier 10.1016/j.coi.2018.05.015

Jörger Messerli, Marianne; Spinelli, Marialuigia; Thomi, Gierin Florence; Haesler, Valérie; Müller, Martin; Surbek, Daniel; Schoeberlein, Andreina (October 2018). Exosomes derived from Wharton's jelly stem cells switch neural progenitor cell fate to oligodendrogenesis. Geburtshilfe und Frauenheilkunde, 78(10), p. 221. Thieme 10.1055/s-0038-1671425

Thomi, Gierin Florence; Jörger Messerli, Marianne; Haesler, Valérie; Müller, Martin; Schoeberlein, Andreina; Surbek, Daniel (October 2018). Intranasal administration of exosomes derived from Wharton's jelly mesenchymal stem cells to treat hypoxic-ischemic encephalopathy of prematurity. Geburtshilfe und Frauenheilkunde, 78(10), pp. 221-222. Thieme 10.1055/s-0038-1671426

Abler, Daniel; Berger, Steve; Terrier, Alexandre; Becce, Fabio; Farron, Alain; Büchler, Philippe (2018). A statistical shape model to predict the premorbid glenoid cavity. Journal of shoulder and elbow surgery, 27(10), pp. 1800-1808. Elsevier 10.1016/j.jse.2018.04.023

Hauser, Michel; Siegrist, Mark; Denzer, Alain; Saulacic, Nikola; Grosjean, Joël; Bohner, Marc; Hofstetter, Wilhelm (2018). Bisphosphonates reduce biomaterial turnover in healing of critical-size rat femoral defects. Journal of orthopaedic surgery, 26(3), p. 2309499018802487. Hong Kong University Press 10.1177/2309499018802487

Graule, Janina; Uth-Gottardi, Kristin; Fischer, Elia Luca; Centeno Ramos, Irene; Galván Hernández, José Alberto; Eichmann, Micha David; Rau, Tilman; Langer, Rupert; Dawson, Heather; Nitsche, Ulrich; Traeger, Peter; Berger, Martin Dave; Schnüriger, Beat; Hädrich, Marion; Studer, Peter; Inderbitzin, Daniel; Lugli, Alessandro; Tschan, Mario; Zlobec, Inti (2018). CDX2 in colorectal cancer is an independent prognostic factor and regulated by promoter methylation and histone deacetylation in tumors of the serrated pathway. Clinical epigenetics, 10(1), p. 120. Springer 10.1186/s13148-018-0548-2

Häfliger, Pascal; Graff, Julien; Rubin, Matthias; Stooss, Amandine; Dettmer, Matthias S.; Altmann, Karl-Heinz; Gertsch, Jürg; Charles, Roch-Philippe (2018). The LAT1 inhibitor JPH203 reduces growth of thyroid carcinoma in a fully immunocompetent mouse model. Journal of experimental & clinical cancer research, 37(1), p. 234. BioMed Central 10.1186/s13046-018-0907-z

Furtwängler, Anja; Reiter, Ella; Neumann, Gunnar U; Siebke, Inga; Steuri, Noah; Hafner, Albert; Lösch, Sandra; Anthes, Nils; Schuenemann, Verena J; Krause, Johannes (2018). Ratio of mitochondrial to nuclear DNA affects contamination estimates in ancient DNA analysis. Scientific Reports, 8(1), p. 14075. Nature Publishing Group 10.1038/s41598-018-32083-0

Niklaus, Nicolas Jan; Humbert, Magali; Tschan, Mario (2018). Cisplatin sensitivity in breast cancer cells is associated with particular DMTF1 splice variant expression. Biochemical and biophysical research communications, 503(4), pp. 2800-2806. Academic Press 10.1016/j.bbrc.2018.08.042

Bischerour, Julien; Bhullar, Simran; Denby Wilkes, Cyril; Régnier, Vinciane; Mathy, Nathalie; Dubois, Emeline; Singh, Aditi; Swart, Estienne Carl; Arnaiz, Olivier; Sperling, Linda; Nowacki, Mariusz; Bétermier, Mireille (2018). Six domesticated PiggyBac transposases together carry out programmed DNA elimination in . eLife, 7 eLife Sciences Publications 10.7554/eLife.37927

Josi, Christoph; Bürki, Sibylle; Stojiljkovic, Ana; Wellnitz, Olga; Stoffel, Michael Hubert; Pilo, Paola (2018). Bovine Epithelial in vitro Infection Models for Mycoplasma bovis. Frontiers in cellular and infection microbiology, 8, p. 329. Frontiers 10.3389/fcimb.2018.00329

Herren, Michael; Shrestha, Neeta; Wyss, Marianne; Zurbriggen, Andreas; Plattet, Philippe (2018). Regulatory Role of the Morbillivirus Attachment Protein Head-to-Stalk Linker Module in Membrane Fusion Triggering. Journal of virology, 92(18) American Society for Microbiology 10.1128/JVI.00679-18

V'kovski, Philip; Gerber, M; Kelly, Jenna Nicole; Pfänder, Stephanie; Ebert, Nadine; Braga, Sophie Marie-Pierre; Simillion, Cedric André Marie; Portmann, Jasmine; Stalder, Hanspeter; Gaschen, Véronique; Bruggmann, Rémy; Stoffel, Michael Hubert; Heller, Manfred; Dijkman, Ronald; Thiel, Volker Earl (14 September 2018). Determination of host cell proteins constituting the molecular microenvironment of coronavirus replicase complexes by proximity-labeling (bioRxiv). Cold Spring Harbor Laboratory 10.1101/417907

Sahli, Luca; Weber, Stefan; Paolucci, Iwan (13 September 2018). Liver surface reconstruction from navigated ultrasound during image-guided liver surgery (Unpublished). In: CURAC 2018 17. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie. Leipzig. 13. - 15. September 2018.

Hermann, Jan; Müller, Fabian Matthias; Schneider, Daniel; Jegge, Yves; Mueller, Lucien; Caversaccio, Marco; Weber, Stefan; Anso, Juan (13 September 2018). Mastoid and ear model mimicking anatomical and physiological properties for development and training of robotic cochlear implantation. In: 17. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie e.V. (CURAC); Tagunsband (pp. 67-72). Universität Leipzig

Eigl, Benjamin Peter; Weber, Stefan; Peterhans, Matthias; Candinas, Daniel; Gloor, Beat; Worni, Mathias (7 September 2018). 3D planning of irreversible electroporation treatment in pancreatic carcinoma: a use case (Unpublished). In: 13th IHPBA World Congress. Geneva. 4.-7.09.2018.

Frey, Sabrina; Cantieni, Tarcisi; Vuillemin, Nicolas; Haine, Axel; Kammer, Rafael Franz; von Tengg-Kobligk, Hendrik; Obrist, Dominik; Baumgartner, Iris (2018). Angioarchitecture and hemodynamics of microvascular arteriovenous malformations. PLoS ONE, 13(9), e0203368. Public Library of Science 10.1371/journal.pone.0203368

Paolucci, Iwan; Eigl, Benjamin; Prevost, Gian Andrea; Lachenmayer, Anja; Peterhans, Matthias; Weber, Stefan; Candinas, Daniel; Beldi, Guido (7 September 2018). An augmented reality navigation system for lapa-roscopic liver surgery – first experiences (Unpublished). In: 13th IHPBA World Congress. Geneva. 4. - 7. September. 10.1016/j.hpb.2018.06.216

Paolucci, Iwan; Eigl, Benjamin Peter; Garcia, Alain; Serra, Edgardo; Weber, Stefan; Gimenez, Mariano E. (7 September 2018). Stereotactic image-guidance for percutaneous transgastric irreversible electroporation of pancreatic tumors – an animal case (Unpublished). In: 18. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie.

Paolucci, Iwan; Schwalbe, Marius; Prevost, Gian Andrea; Lachenmayer, Anja; Candinas, Daniel; Weber, Stefan; Tinguely, Pascale Marie Pia (7 September 2018). An intraoperative ultrasound-based navigation approach for laparoscopic ablation of liver tumors. HPB : official journal of The International Hepato-Pancreato-Biliary Association, 20(S2), S452-S453. Elsevier 10.1016/j.hpb.2018.06.2859

Liechti, Nicole; Schürch, Nadia; Bruggmann, Rémy; Wittwer, Matthias (2018). The genome of Naegleria lovaniensis, the basis for a comparative approach to unravel pathogenicity factors of the human pathogenic amoeba N. fowleri. BMC Genomics, 19(1), p. 654. BioMed Central 10.1186/s12864-018-4994-1

Gupta, Ankit; Paolucci, Iwan; Sznitman, Raphael; Weber, Stefan; Candinas, Daniel (4 September 2018). Video based instrument pose tracking in navigated laparoscopic surgery (Unpublished). In: International Hepato-Pancreato-Biliary Association Congress 2018. Geneva. 4-7 September 2018.

Belle, Fabiën N; Kasteler, Rahel; Schindera, Christina; Bochud, Murielle; Ammann, Roland A; von der Weid, Nicolas X; Kuehni, Claudia E; Oncology Group (SPOG), Swiss Pediatric (2018). No Evidence of Overweight in Long-Term Survivors of Childhood Cancer After Glucocorticoid Treatment. Cancer, 124(17), pp. 3576-3585. John Wiley & Sons 10.1002/cncr.31599

Kyathanahally, Sreenath Pruthviraj; Döring, André; Kreis, Roland (2018). Deep learning approaches for detection and removal of ghosting artifacts in MR spectroscopy. Magnetic resonance in medicine, 80(3), pp. 851-863. Wiley-Liss 10.1002/mrm.27096

Gawliczek, Tom; Munzinger, Fabio; Anschütz, Lukas Peter; Caversaccio, Marco; Kompis, Martin; Wimmer, Wilhelm (2018). Unilateral and Bilateral Audiological Benefit With an Adhesively Attached, Noninvasive Bone Conduction Hearing System. Otology & neurotology, 39(8), pp. 1025-1030. Lippincott Williams & Wilkins 10.1097/MAO.0000000000001924

Bruni, Pia Simona; Grafinger, Katharina; Nussbaumer, Susanne; König, Stefan; Schürch, Stefan; Weinmann, Wolfgang (2018). Study of the in vitro and in vivo metabolism of 4-HO-MET. Forensic science international, 290, pp. 103-110. Elsevier Scientific Publ. Ireland 10.1016/j.forsciint.2018.06.037

Holzgang, Melanie Martina; Eigl, Benjamin; Erdem, Suna; Gloor, Beat; Worni, Mathias (2018). Irreversible electroporation in pancreatic cancer. In: Rodrigo, Luis (ed.) Advances in Pancreatic Cancer (pp. 97-114). IntechOpen 10.5772/intechopen.75737

Christodoulidis, Stergios; Sahasrabudhe, Mihir; Vakalopoulou, Maria; Chassagnon, Guillaume; Revel, Marie-Pierre; Mougiakakou, Stavroula Georgia; Paragios, Nikos (September 2018). Linear and Deformable Image Registration with 3D Convolutional Neural Networks. In: 21st International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI2018). Lecture Notes in Computer Science: Vol. 11040 (pp. 13-22). Springer, Cham 10.1007/978-3-030-00946-5_2

Hrabuska, Radek; Sandu, Raluca-Maria; Paolucci, Iwan; Weber, Stefan (September 2018). A Framework For The Quantitative Assessment of Image-guided Percutaneous Ablation of Hepatic Lesions. In: CURAC 2018 Tagungsband der 17. Jahrestagung der Deutschen Gesellschaft für Computer- und Roboterassistierte Chirurgie. Leipzig, Deutschland. 13-15 Sep 2018.

Thomi, Gierin Florence; Haesler, Valérie; Jörger Messerli, Marianne; Surbek, Daniel; Schoeberlein, Andreina (September 2018). Immunomodulatory Effects of Exosomes Derived from Human Wharton's Jelly Mesenchymal Stem Cells in Perinatal Brain Injury. (Unpublished). In: International Stem Cell Conference / 5th meeting of the International Placenta Stem Cell Society (IPLASS). Bern. September 6-7, 2018.

Jörger Messerli, Marianne; Thomi, Gierin Florence; Spinelli, Marialuigia; Haesler, Valérie; Surbek, Daniel; Schoeberlein, Andreina (September 2018). Exosomes Derived from Stem Cells of the Umbilical Cord Tissue as Mediator of Oligodendroglial Cell Fate Switch. (Unpublished). In: International Stem Cell Conference / 5th meeting of the International Placenta Stem Cell Society (IPLASS),. Bern. September 6-7, 2018.

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Muri, Lukas; Grandgirard, Denis; Buri, Michelle; Perny, Michael; Leib, Stephen (2018). Combined effect of non-bacteriolytic antibiotic and inhibition of matrix metalloproteinases prevents brain injury and preserves learning, memory and hearing function in experimental paediatric pneumococcal meningitis. Journal of neuroinflammation, 15(1), p. 233. BioMed Central 10.1186/s12974-018-1272-8

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